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MS026001 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTTGTTAAGACGTGGGGATGGAGAGTCAGAGCCAGAGAGCGCCGGCCTGTTTGAGGAGGGGGACGAGGGTGCCATTGATATGGGAAGACATGAGAGTTTCGACGCCGCCGAGGAACTTGCCGCCGACGAATACGGCGGGGATGGGTGGGCCGGGGCGGAGGTGGTGGAGGACGGCTTCGATGTCGGGGCCGTGGGAGAGGTGGTCGAGCTCGACGACGGTGGGGCCGACGCCGAGGCCGAAGAGGAGGCGTTTGACCACGGTGCACATGCAGCAGCCGCTCATGCTGAACACCACCACCGCATTGCACTCCGCCAGCTGCCGCACCACCTCGTACGGGTTGCTCGCCGCCACCGGCCGACCAGCTTCCATGGAAATTGTGGATTTGTTGGCCACTTGCATGGTTCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTGAAAAGAGAGGAATTGGCGGAGTGA ATGAATTTGTTAAGACGTGGGGATGGAGAGTCAGAGCCAGAGAGCGCCGGCCTGTTTGAGGAGGGGGACGAGGGTGCCATTGATATGGGAAGACATGAGAGTTTCGACGCCGCCGAGGAACTTGCCGCCGACGAATACGGCGGGGATGGGTGGGCCGGGGCGGAGGTGGTGGAGGACGGCTTCGATGTCGGGGCCGTGGGAGAGGTGGTCGAGCTCGACGACGGTGGGGCCGACGCCGAGGCCGAAGAGGAGGCGTTTGACCACGGTGCACATGCAGCAGCCGCTCATGCTGAACACCACCACCGCATTGCACTCCGCCAGCTGCCGCACCACCTCGTACGGGTTGCTCGCCGCCACCGGCCGACCAGCTTCCATGGAAATTGTGGATTTGTTGGCCACTTGCATGGTTCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTGAAAAGAGAGGAATTGGCGGAGTGA ATGAATTTGTTAAGACGTGGGGATGGAGAGTCAGAGCCAGAGAGCGCCGGCCTGTTTGAGGAGGGGGACGAGGGTGCCATTGATATGGGAAGACATGAGAGTTTCGACGCCGCCGAGGAACTTGCCGCCGACGAATACGGCGGGGATGGGTGGGCCGGGGCGGAGGTGGTGGAGGACGGCTTCGATGTCGGGGCCGTGGGAGAGGTGGTCGAGCTCGACGACGGTGGGGCCGACGCCGAGGCCGAAGAGGAGGCGTTTGACCACGGTGCACATGCAGCAGCCGCTCATGCTGAACACCACCACCGCATTGCACTCCGCCAGCTGCCGCACCACCTCGTACGGGTTGCTCGCCGCCACCGGCCGACCAGCTTCCATGGAAATTGTGGATTTGTTGGCCACTTGCATGGTTCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTGAAAAGAGAGGAATTGGCGGAGTGA MNLLRRGDGESEPESAGLFEEGDEGAIDMGRHESFDAAEELAADEYGGDGWAGAEVVEDGFDVGAVGEVVELDDGGADAEAEEEAFDHGAHAAAAHAEHHHRIALRQLPHHLVRVARRHRPTSFHGNCGFVGHLHGSRERERERERELKREELAE Homology
BLAST of MS026001 vs. NCBI nr
Match: KAA0052529.1 (hypothetical protein E6C27_scaffold120G001300 [Cucumis melo var. makuwa] >TYK13296.1 hypothetical protein E5676_scaffold255G009170 [Cucumis melo var. makuwa]) HSP 1 Score: 105.9 bits (263), Expect = 3.1e-19 Identity = 64/106 (60.38%), Postives = 81/106 (76.42%), Query Frame = 0
BLAST of MS026001 vs. NCBI nr
Match: RAL50253.1 (hypothetical protein DM860_007927 [Cuscuta australis]) HSP 1 Score: 90.9 bits (224), Expect = 1.0e-14 Identity = 63/111 (56.76%), Postives = 71/111 (63.96%), Query Frame = 0
BLAST of MS026001 vs. NCBI nr
Match: KAG6594452.1 (hypothetical protein SDJN03_11005, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 80.9 bits (198), Expect = 1.1e-11 Identity = 54/92 (58.70%), Postives = 65/92 (70.65%), Query Frame = 0
BLAST of MS026001 vs. NCBI nr
Match: GER28086.1 (glycosyl hydrolase family protein with chitinaseinsertion domain [Striga asiatica]) HSP 1 Score: 65.5 bits (158), Expect = 4.7e-07 Identity = 46/121 (38.02%), Postives = 68/121 (56.20%), Query Frame = 0
BLAST of MS026001 vs. NCBI nr
Match: ACN27751.1 (unknown [Zea mays]) HSP 1 Score: 60.1 bits (144), Expect = 2.0e-05 Identity = 49/112 (43.75%), Postives = 63/112 (56.25%), Query Frame = 0
BLAST of MS026001 vs. ExPASy TrEMBL
Match: A0A5A7UGA5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009170 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 1.5e-19 Identity = 64/106 (60.38%), Postives = 81/106 (76.42%), Query Frame = 0
BLAST of MS026001 vs. ExPASy TrEMBL
Match: A0A328E1C8 (Uncharacterized protein OS=Cuscuta australis OX=267555 GN=DM860_007927 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 5.1e-15 Identity = 63/111 (56.76%), Postives = 71/111 (63.96%), Query Frame = 0
BLAST of MS026001 vs. ExPASy TrEMBL
Match: A0A5A7P6I1 (Glycosyl hydrolase family protein with chitinaseinsertion domain OS=Striga asiatica OX=4170 GN=STAS_03854 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 2.3e-07 Identity = 46/121 (38.02%), Postives = 68/121 (56.20%), Query Frame = 0
BLAST of MS026001 vs. ExPASy TrEMBL
Match: C0P435 (Uncharacterized protein OS=Zea mays OX=4577 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 9.6e-06 Identity = 49/112 (43.75%), Postives = 63/112 (56.25%), Query Frame = 0
BLAST of MS026001 vs. ExPASy TrEMBL
Match: A0A059B5Z5 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H03859 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 9.0e-04 Identity = 44/109 (40.37%), Postives = 59/109 (54.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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