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MS025976 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGAAAACTTATGGTCTTGTAGTCTGCATCTTGGTTATTGTTATGGATGTTACAGCCGGAATACTTGGAATTCAGGCTGAGATAGCTCAAAACAAGGTATGCGCTGGAATGGAAATTATGTACCTGACGTTTTTGTTATAGATTTGAAATTTTTTTCCCCACTTATTTTCTGTGCTTTGTGACAGGTGAACCATTTCAAAATGTGGATATTTGAATGTAAAGACCCCAGCTACAATGCTTTCAAGTTGGGCTTGGCTGCAGCCATACTGCTTGGCCTTGCTCATGCCATTGCCAACTTGTTTGGTGGATGCTTCTGCGTTCGATCGGCTGATGAATACAAAGGATTAACAGCTAACAAGCAATTTGCTGTAGCCTCGCTCGTCTTTGCATGGTAAGTTCTCAAAGTTGCAATTTAGGAGATTCCCCGAGCTAGATTCATCATCTGAAAATTCTCATAAACTGGTGAATCCAAACCTTGTTGACCCCTAACATTTTCGAACGCTGATTGTATGATATTCTCATCAGGATTGCGCTTCTGCTCGGATTCTCATTGCTTATCTCAGGAGCAATGTATAACACAAGGTCGAGAAAATCGTGCGGTCTAGCTCACAATCGTCTTCTGTCTATAGGGGGGATTGTTTGCTTCATACACGGCTTGTTTGTAGTTGCTTATTATATTACTGCCACGGCAGGACTCAGGGAGGAGACAAAGCCACCGCCGCCACAACAGGGAAACCCTGCTGGAGCTACAGGCCACGTTTAG ATGCAGAAAACTTATGGTCTTGTAGTCTGCATCTTGGTTATTGTTATGGATGTTACAGCCGGAATACTTGGAATTCAGGCTGAGATAGCTCAAAACAAGGTGAACCATTTCAAAATGTGGATATTTGAATGTAAAGACCCCAGCTACAATGCTTTCAAGTTGGGCTTGGCTGCAGCCATACTGCTTGGCCTTGCTCATGCCATTGCCAACTTGTTTGGTGGATGCTTCTGCGTTCGATCGGCTGATGAATACAAAGGATTAACAGCTAACAAGCAATTTGCTGTAGCCTCGCTCGTCTTTGCATGGATTGCGCTTCTGCTCGGATTCTCATTGCTTATCTCAGGAGCAATGTATAACACAAGGTCGAGAAAATCGTGCGGTCTAGCTCACAATCGTCTTCTGTCTATAGGGGGGATTGTTTGCTTCATACACGGCTTGTTTGTAGTTGCTTATTATATTACTGCCACGGCAGGACTCAGGGAGGAGACAAAGCCACCGCCGCCACAACAGGGAAACCCTGCTGGAGCTACAGGCCACGTTTAG ATGCAGAAAACTTATGGTCTTGTAGTCTGCATCTTGGTTATTGTTATGGATGTTACAGCCGGAATACTTGGAATTCAGGCTGAGATAGCTCAAAACAAGGTGAACCATTTCAAAATGTGGATATTTGAATGTAAAGACCCCAGCTACAATGCTTTCAAGTTGGGCTTGGCTGCAGCCATACTGCTTGGCCTTGCTCATGCCATTGCCAACTTGTTTGGTGGATGCTTCTGCGTTCGATCGGCTGATGAATACAAAGGATTAACAGCTAACAAGCAATTTGCTGTAGCCTCGCTCGTCTTTGCATGGATTGCGCTTCTGCTCGGATTCTCATTGCTTATCTCAGGAGCAATGTATAACACAAGGTCGAGAAAATCGTGCGGTCTAGCTCACAATCGTCTTCTGTCTATAGGGGGGATTGTTTGCTTCATACACGGCTTGTTTGTAGTTGCTTATTATATTACTGCCACGGCAGGACTCAGGGAGGAGACAAAGCCACCGCCGCCACAACAGGGAAACCCTGCTGGAGCTACAGGCCACGTTTAG MQKTYGLVVCILVIVMDVTAGILGIQAEIAQNKVNHFKMWIFECKDPSYNAFKLGLAAAILLGLAHAIANLFGGCFCVRSADEYKGLTANKQFAVASLVFAWIALLLGFSLLISGAMYNTRSRKSCGLAHNRLLSIGGIVCFIHGLFVVAYYITATAGLREETKPPPPQQGNPAGATGHV Homology
BLAST of MS025976 vs. NCBI nr
Match: XP_022142361.1 (uncharacterized protein LOC111012499 [Momordica charantia]) HSP 1 Score: 359.4 bits (921), Expect = 1.8e-95 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of MS025976 vs. NCBI nr
Match: XP_004134744.2 (uncharacterized protein LOC101214369 [Cucumis sativus]) HSP 1 Score: 312.8 bits (800), Expect = 2.0e-81 Identity = 153/180 (85.00%), Postives = 168/180 (93.33%), Query Frame = 0
BLAST of MS025976 vs. NCBI nr
Match: KAE8647674.1 (hypothetical protein Csa_003691 [Cucumis sativus]) HSP 1 Score: 312.8 bits (800), Expect = 2.0e-81 Identity = 153/180 (85.00%), Postives = 168/180 (93.33%), Query Frame = 0
BLAST of MS025976 vs. NCBI nr
Match: XP_008439942.1 (PREDICTED: uncharacterized protein LOC103484578 [Cucumis melo] >KAA0052746.1 hypothetical protein E6C27_scaffold120G003610 [Cucumis melo var. makuwa] >TYK13077.1 hypothetical protein E5676_scaffold255G006840 [Cucumis melo var. makuwa]) HSP 1 Score: 307.8 bits (787), Expect = 6.3e-80 Identity = 151/180 (83.89%), Postives = 166/180 (92.22%), Query Frame = 0
BLAST of MS025976 vs. NCBI nr
Match: XP_022950216.1 (uncharacterized protein LOC111453374 [Cucurbita moschata] >XP_023544502.1 uncharacterized protein LOC111804056 [Cucurbita pepo subsp. pepo] >KAG7033922.1 hypothetical protein SDJN02_03648, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 307.8 bits (787), Expect = 6.3e-80 Identity = 154/180 (85.56%), Postives = 164/180 (91.11%), Query Frame = 0
BLAST of MS025976 vs. ExPASy TrEMBL
Match: A0A6J1CLY7 (uncharacterized protein LOC111012499 OS=Momordica charantia OX=3673 GN=LOC111012499 PE=4 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 8.9e-96 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of MS025976 vs. ExPASy TrEMBL
Match: A0A0A0KLA9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516650 PE=4 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 9.5e-82 Identity = 153/180 (85.00%), Postives = 168/180 (93.33%), Query Frame = 0
BLAST of MS025976 vs. ExPASy TrEMBL
Match: A0A5D3CMA3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006840 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 3.1e-80 Identity = 151/180 (83.89%), Postives = 166/180 (92.22%), Query Frame = 0
BLAST of MS025976 vs. ExPASy TrEMBL
Match: A0A6J1GE80 (uncharacterized protein LOC111453374 OS=Cucurbita moschata OX=3662 GN=LOC111453374 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 3.1e-80 Identity = 154/180 (85.56%), Postives = 164/180 (91.11%), Query Frame = 0
BLAST of MS025976 vs. ExPASy TrEMBL
Match: A0A1S3AZY5 (uncharacterized protein LOC103484578 OS=Cucumis melo OX=3656 GN=LOC103484578 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 3.1e-80 Identity = 151/180 (83.89%), Postives = 166/180 (92.22%), Query Frame = 0
BLAST of MS025976 vs. TAIR 10
Match: AT4G21310.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 224.2 bits (570), Expect = 8.6e-59 Identity = 106/163 (65.03%), Postives = 129/163 (79.14%), Query Frame = 0
BLAST of MS025976 vs. TAIR 10
Match: AT2G32280.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 184.5 bits (467), Expect = 7.5e-47 Identity = 82/164 (50.00%), Postives = 121/164 (73.78%), Query Frame = 0
BLAST of MS025976 vs. TAIR 10
Match: AT1G11500.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 125.9 bits (315), Expect = 3.2e-29 Identity = 68/169 (40.24%), Postives = 100/169 (59.17%), Query Frame = 0
BLAST of MS025976 vs. TAIR 10
Match: AT1G05291.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 94.7 bits (234), Expect = 7.9e-20 Identity = 61/172 (35.47%), Postives = 86/172 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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