MS025960 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAAACGACAACAGTACCAATAATCCGTCGACTCCTGGTGGCCGGACTCGGCATCGGAGGCGGCCAAGTGATGTTCGTCACTTCCTCTTTGATGCATACCGTTTTTCTTACGTTTTATTCACTGTCGTCTTTTTTTTTTTTTTTTTTTCAATGAAATCCAACCCTCCATTCTTGACGCTTAAATTTTTAGTACTAATAATATCGGGGGATGTCAAATCGTATAAAGAGCTCAATGCTATATTATTTCTGTCAACTTAAATGCCGTAGCTTCATTTTTACTATTTTTAGCTATATTCTTATTCCCTCTCATTGTAGGTGCAGCAATCATGCATTGGGATATTGTTGGTGCAGCAATTTTAATAGTTTACTTTTGAATTAATTTTAAGGTTATTTCGGACGATGGCAAAGGCAAACCAAGTGAAGGCAATTTACTTGTTAATGACCACAATAAATACAAATCGTTCTTGATCCGTGCATACTCAACCATTTGGATGATTGGGGGTTTTGCATTGATTATATACTTGGGGCATCTCTATATTACGGCCATGGTTGTTGTCATTCAAGTTTACATGGCGAAGGAACTGTTCAACCTACTCAGGAGAGCTCGTGAGGATACACGTCTACCAGGATTCCGACTATTAAATTGGTAACGTTGATGCTTCATGCTCGCTTGTTTTTTCTGTGGTCTATTCTCTAATCTCTTTCTTTTTTTAGGAGCTTGCATTTTGTAATTACTAATTGATTAGTTCTCAAGTGCAGGCACTTCTTCTTCACGGCAATGCTATTTGTGTATGGTCGCATTTTAAGTCAGCGGCTTGTTAATACTGTCACTTCAGATAAATTTTTATATCAGCTAGTGAGCAGTCTCATCAAGTACCATATGGTTATCTGTTATTCCTTATACATTGCAGGTTGGTAGCCCAATTAAAAATTTCACCATCTTGAAACATAAACCAGTGCCGTTAAAATCATGTCATGGTGTGCAGTTTACAACTGCAAATTTATTCGTGTCATAATTTTCATGGTCTTTTTTTTGTTTGATTTCCATTTCTTGTATTGTCTTTTAATTTTTCTTTTGCATGAATTGTATTAGTTTTTTCAGTTTTCTGGAAATTTTAATTTTCTTGACAACTTTGTAACATTATTCCCTCATTATCTTTTCCCTTTCTTTTTGGGCTCAGGTTTTATGTGGTTCATTCTTACTTTAAAGAAGAAGATGTACAAATATCAATTTGGCCAGTATGCATGGACGCATATGATTCTAATTGTCGTTTTTACACAGTCCTCTTTCACAGTAGCCAATATTTTTGAAGGAATCATCTGGTAGTTCAACTACTTAAAGAGGAAAGAAAATTATGTTAAAGCAAATCATGTCTTCTGTGGCTTGAAGTTAGCCTTGGAATTTCACTTTTTTCCTTATGAATGAGTAATATTTCTGCAGGTTTCTCCTACCAGCATCACTTATTGTTATCAATGACATTGCTGCCTATATATTTGGTTTCTTCTTTGGAAGAACACCTTTGATCAAGTTATCTCCAAAGAAAACTTGGGAGGGATTTATAGGAGCCTCTATTATGACTATCATATCTGCTTTTGGCGTGAGCAAATTTTTCTTTTACGTTCTATTTTCCTCACTGGATTTATTCAGTTTCTTATGTCAACCTGTTGTCGAGGTTGCTCGACTATGTGTCATCCATTTACGTGATAGAGCTTCGTAGTTTTTGTTATGAGAATCATGAACTATTATCATATGAGTAGCTTAAATTGCCTAAAATAGTGCTCATTTTGATTGTATTGGTGAAGTTGAACACCAATCATTAAAAGAATTAGTCTTTCTATGTAGAATTGCTACATTTGCAATGACTAGGCTAGTGGTTTGTTGTAGTAATGATTTCTTGTTAACAATCTATATGCAGCCGGACATTTGTACTTAATGAATATGGGATGTTCAACTGTTTTTGCAGCTTGCTAATGTCATGGGTCGTTATCAGTGGCTTACTTGTCCAAGAACGGTAATTGTTTCGTAATAACACCTTTCTTGAAGAGGTCTGTTCTTATTTTGAAGCTTTTGCTGTCATATGGTGCAATAATCTCAGGATTTATCAACTGGTTGGCTTCACTGTGATCCTGGTCCTTTGTTTAAGTCCGAATATTTCACTTTACCAGGATGGACTCCTGATTGGGTTAGTAAAGACTATAAATTGTATCTTATTTAATATGATTAGTATATCTCTTCTCTCCCTTCTATTTCCGGAATTCTTTTAATCGTGTCTAAAGCTATTAATTTTACAATCTCATAGTAAAATTGTCTCTAATATGTGCATCTATGTATGTCTTTAACCTGACTTTAGCCGAGGCCATATTATCTTGCTGATTTCTTTTTAGTTTACATTTGTTAGAACATTGGTGAAGTCAGCAAGTTCATTACTAGACCCATAGACTAAACCTCTAATAGAGGGAGAGTAGCGGGGAAAGGTAAGCCTGTGAACCACTCAAGCTTTACTTGAGAGGAGATGGGAGGAGTGAGCCATTTGAACAACATAACGAAGAAGAGAGAGATGTCTTGAACCCATTTGGGCTTTAGAGAGCAACCAGGAGAAGAGAGAAATTTCTGAGGAATCCTCAGTGAGTGGGAAAGAGGAGAGATATATACAATGTGTAGTATACAAAGAGTATCCATGAGAATATTGTATTAACGTGATGTGTATCTTTTAGATATGTATAATGTGGAATATCCATTCAGATTTTGTCCTATGGTTTTGTCTTTTGATGATTTTCTGCATAAGTAATCGTTATCAATTTAATTCGTTCAACCCTTAACACAAAAGCAGACAGGCAAATCTTAGAAAAATTATTAGCCTATATTGACAATAGCATGTTTCTTACTCAACAACTGGTCTTAGAGCTAAGCCTATTATGCCCCTACAGAAGTGTCTATTCCCACCTTTAGCTTGTATCAGGCGTAATCTTCCCAATTCATATGAGCTGCTTGGCATGTATATTGTATACTTTCTTCAGCTTTTGAAGGTGGATACTCACCATTCTTCTATGAACTGCATGCAATATTGTTTTAGCTTACAAGACTCATGAAGTTACTTCAAATCTGCGTGGAACTCACATTTCTGTATTCTCTGTCAGTTTCCATGGAAGAAAGTAAGCATATTGCCTGTTCAAGGACATGCATTATGTCTTGGTTTATTTGCATCAATAATTGCTCCTTTTGGAGGCTTCTTTGCGAGTGGTTTCAAAAGAGCTTTCAAAGTCAAGGTTCATTTCAAATATCGTCCTTGTAATGTTTTGCAAAGTCTCAATTTTGAGATCAGTTGTCAGTACACGATTTCTCTTTTTGATGCAGGATTTTGGTGATAGCATCCCTGGGCATGGTGGAATTACAGATAGAATGGATTGTCAGGTGAACCATTGAGAACTCTGAACATTGCTGTCTTCGATTAATTTTCTTAATTCAAAACTCTTGATCAACCATAGGTCCATACCTTATATTAAAGACAAAGGACTTTTACAAATATGTTCTCCCATTGGAACTTGACACTGATTCTTAGAGTTCATTGTAATCCTCTTTCAAACTATGGTTTGTAATCCTCTTTCAAACCAAGGTGACTAGTCACCTGCCTGGGATTTAATGTCCTATGAATTACTTTGGCCTATACGTAGTAGAGTGAAGTTGTTGTCCCATGAGAATAGTTGAGGGTGTACAAACTAGCCCGCCTACAGCTTAGAAGACGAGAGAGAGTAGTTTTGTGTCTTTGTGGGAGGTTCTAGCTGGTCTAAAAGTAATGTATTTGTGTTGCATATCAAAATAATTCTGTTTATTGCTTATTCAGATAGTGTAGCCCTTTCCCCTATTTATGTGCATTTCCCTAATTGCATAATACTTTACGTAGATGGTGATGGCTGTATTCGCTTACATATATCATCAATCATTTGTTGTGGCTCAGAGCCTAACTGTTGACACAATCTTGGATCAGGTAGTCCTACGTGCCCCATTTTATTTCTGTATATCATATAAGCTTTTTCACCAATATTGTGTAAAATCGTATATGCTGAGTGTATTGCTGCTTTATAGATACTCATGAATCTCACAATCGAGGAACAAGCAGCTCTTTACTTGAAGCTTGGGCAAATCTTGCAACAGCGGATGGTTGGCTAG ATGATAAACGACAACAGTACCAATAATCCGTCGACTCCTGGTGGCCGGACTCGGCATCGGAGGCGGCCAAGTGATGTTCGTCACTTCCTCTTTGATGCATACCGTTTTTCTTACCTTGCTAATGTCATGGGTCGTTATCAGTGGCTTACTTGTCCAAGAACGGATTTATCAACTGGTTGGCTTCACTGTGATCCTGGTCCTTTGTTTAAGTCCGAATATTTCACTTTACCAGGATGGACTCCTGATTGGTTTCCATGGAAGAAAGTAAGCATATTGCCTGTTCAAGGACATGCATTATGTCTTGGTTTATTTGCATCAATAATTGCTCCTTTTGGAGGCTTCTTTGCGAGTGGTTTCAAAAGAGCTTTCAAAGTCAAGGATTTTGGTGATAGCATCCCTGGGCATGGTGGAATTACAGATAGAATGGATTGTCAGATGGTGATGGCTGTATTCGCTTACATATATCATCAATCATTTGTTGTGGCTCAGAGCCTAACTGTTGACACAATCTTGGATCAGATACTCATGAATCTCACAATCGAGGAACAAGCAGCTCTTTACTTGAAGCTTGGGCAAATCTTGCAACAGCGGATGGTTGGCTAG ATGATAAACGACAACAGTACCAATAATCCGTCGACTCCTGGTGGCCGGACTCGGCATCGGAGGCGGCCAAGTGATGTTCGTCACTTCCTCTTTGATGCATACCGTTTTTCTTACCTTGCTAATGTCATGGGTCGTTATCAGTGGCTTACTTGTCCAAGAACGGATTTATCAACTGGTTGGCTTCACTGTGATCCTGGTCCTTTGTTTAAGTCCGAATATTTCACTTTACCAGGATGGACTCCTGATTGGTTTCCATGGAAGAAAGTAAGCATATTGCCTGTTCAAGGACATGCATTATGTCTTGGTTTATTTGCATCAATAATTGCTCCTTTTGGAGGCTTCTTTGCGAGTGGTTTCAAAAGAGCTTTCAAAGTCAAGGATTTTGGTGATAGCATCCCTGGGCATGGTGGAATTACAGATAGAATGGATTGTCAGATGGTGATGGCTGTATTCGCTTACATATATCATCAATCATTTGTTGTGGCTCAGAGCCTAACTGTTGACACAATCTTGGATCAGATACTCATGAATCTCACAATCGAGGAACAAGCAGCTCTTTACTTGAAGCTTGGGCAAATCTTGCAACAGCGGATGGTTGGCTAG MINDNSTNNPSTPGGRTRHRRRPSDVRHFLFDAYRFSYLANVMGRYQWLTCPRTDLSTGWLHCDPGPLFKSEYFTLPGWTPDWFPWKKVSILPVQGHALCLGLFASIIAPFGGFFASGFKRAFKVKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFVVAQSLTVDTILDQILMNLTIEEQAALYLKLGQILQQRMVG Homology
BLAST of MS025960 vs. NCBI nr
Match: XP_022132605.1 (phosphatidate cytidylyltransferase 2 [Momordica charantia]) HSP 1 Score: 341.3 bits (874), Expect = 5.7e-90 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of MS025960 vs. NCBI nr
Match: XP_022132605.1 (phosphatidate cytidylyltransferase 2 [Momordica charantia]) HSP 1 Score: 57.4 bits (137), Expect = 1.7e-04 Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0
HSP 2 Score: 331.6 bits (849), Expect = 4.6e-87 Identity = 155/162 (95.68%), Postives = 161/162 (99.38%), Query Frame = 0
BLAST of MS025960 vs. NCBI nr
Match: XP_022977683.1 (phosphatidate cytidylyltransferase 2-like [Cucurbita maxima] >XP_022977685.1 phosphatidate cytidylyltransferase 2-like [Cucurbita maxima] >XP_022977686.1 phosphatidate cytidylyltransferase 2-like [Cucurbita maxima]) HSP 1 Score: 51.6 bits (122), Expect = 9.1e-03 Identity = 22/26 (84.62%), Postives = 25/26 (96.15%), Query Frame = 0
HSP 2 Score: 330.9 bits (847), Expect = 7.8e-87 Identity = 154/162 (95.06%), Postives = 161/162 (99.38%), Query Frame = 0
BLAST of MS025960 vs. NCBI nr
Match: KAG7033993.1 (Phosphatidate cytidylyltransferase 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 51.6 bits (122), Expect = 9.1e-03 Identity = 22/26 (84.62%), Postives = 25/26 (96.15%), Query Frame = 0
HSP 2 Score: 330.9 bits (847), Expect = 7.8e-87 Identity = 154/162 (95.06%), Postives = 161/162 (99.38%), Query Frame = 0
BLAST of MS025960 vs. NCBI nr
Match: XP_022950559.1 (phosphatidate cytidylyltransferase 2-like [Cucurbita moschata] >XP_022950560.1 phosphatidate cytidylyltransferase 2-like [Cucurbita moschata] >XP_022950561.1 phosphatidate cytidylyltransferase 2-like [Cucurbita moschata] >KAG6603813.1 Phosphatidate cytidylyltransferase 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 51.6 bits (122), Expect = 9.1e-03 Identity = 22/26 (84.62%), Postives = 25/26 (96.15%), Query Frame = 0
HSP 2 Score: 330.5 bits (846), Expect = 1.0e-86 Identity = 154/162 (95.06%), Postives = 161/162 (99.38%), Query Frame = 0
BLAST of MS025960 vs. ExPASy Swiss-Prot
Match: O49639 (Phosphatidate cytidylyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=CDS2 PE=1 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 2.1e-74 Identity = 128/162 (79.01%), Postives = 145/162 (89.51%), Query Frame = 0
BLAST of MS025960 vs. ExPASy Swiss-Prot
Match: O04940 (Phosphatidate cytidylyltransferase 1 OS=Solanum tuberosum OX=4113 GN=CDS1 PE=1 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 1.9e-72 Identity = 125/162 (77.16%), Postives = 144/162 (88.89%), Query Frame = 0
BLAST of MS025960 vs. ExPASy Swiss-Prot
Match: O04928 (Phosphatidate cytidylyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=CDS1 PE=1 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 2.5e-72 Identity = 125/160 (78.12%), Postives = 143/160 (89.38%), Query Frame = 0
BLAST of MS025960 vs. ExPASy Swiss-Prot
Match: Q1PE48 (Phosphatidate cytidylyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=CDS3 PE=1 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 2.5e-64 Identity = 115/161 (71.43%), Postives = 131/161 (81.37%), Query Frame = 0
BLAST of MS025960 vs. ExPASy Swiss-Prot
Match: P38221 (Phosphatidate cytidylyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CDS1 PE=1 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 9.4e-35 Identity = 74/153 (48.37%), Postives = 97/153 (63.40%), Query Frame = 0
BLAST of MS025960 vs. ExPASy TrEMBL
Match: A0A6J1BSX7 (Phosphatidate cytidylyltransferase OS=Momordica charantia OX=3673 GN=LOC111005427 PE=3 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 2.8e-90 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of MS025960 vs. ExPASy TrEMBL
Match: A0A6J1BSX7 (Phosphatidate cytidylyltransferase OS=Momordica charantia OX=3673 GN=LOC111005427 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 8.0e-05 Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0
HSP 2 Score: 331.6 bits (849), Expect = 2.2e-87 Identity = 155/162 (95.68%), Postives = 161/162 (99.38%), Query Frame = 0
BLAST of MS025960 vs. ExPASy TrEMBL
Match: A0A6J1IKN3 (Phosphatidate cytidylyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111477920 PE=3 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 4.4e-03 Identity = 22/26 (84.62%), Postives = 25/26 (96.15%), Query Frame = 0
HSP 2 Score: 330.9 bits (847), Expect = 3.8e-87 Identity = 154/162 (95.06%), Postives = 161/162 (99.38%), Query Frame = 0
BLAST of MS025960 vs. ExPASy TrEMBL
Match: A0A6J1GF61 (Phosphatidate cytidylyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111453625 PE=3 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 4.4e-03 Identity = 22/26 (84.62%), Postives = 25/26 (96.15%), Query Frame = 0
HSP 2 Score: 330.5 bits (846), Expect = 4.9e-87 Identity = 153/163 (93.87%), Postives = 160/163 (98.16%), Query Frame = 0
BLAST of MS025960 vs. ExPASy TrEMBL
Match: A0A5D3CRH1 (Phosphatidate cytidylyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006040 PE=3 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 4.9e-87 Identity = 153/163 (93.87%), Postives = 160/163 (98.16%), Query Frame = 0
BLAST of MS025960 vs. TAIR 10
Match: AT4G22340.1 (cytidinediphosphate diacylglycerol synthase 2 ) HSP 1 Score: 280.0 bits (715), Expect = 1.5e-75 Identity = 128/162 (79.01%), Postives = 145/162 (89.51%), Query Frame = 0
BLAST of MS025960 vs. TAIR 10
Match: AT4G22340.2 (cytidinediphosphate diacylglycerol synthase 2 ) HSP 1 Score: 280.0 bits (715), Expect = 1.5e-75 Identity = 128/162 (79.01%), Postives = 145/162 (89.51%), Query Frame = 0
BLAST of MS025960 vs. TAIR 10
Match: AT4G22340.3 (cytidinediphosphate diacylglycerol synthase 2 ) HSP 1 Score: 280.0 bits (715), Expect = 1.5e-75 Identity = 128/162 (79.01%), Postives = 145/162 (89.51%), Query Frame = 0
BLAST of MS025960 vs. TAIR 10
Match: AT1G62430.1 (CDP-diacylglycerol synthase 1 ) HSP 1 Score: 273.1 bits (697), Expect = 1.8e-73 Identity = 125/160 (78.12%), Postives = 143/160 (89.38%), Query Frame = 0
BLAST of MS025960 vs. TAIR 10
Match: AT4G26770.1 (Phosphatidate cytidylyltransferase family protein ) HSP 1 Score: 246.5 bits (628), Expect = 1.8e-65 Identity = 115/161 (71.43%), Postives = 131/161 (81.37%), Query Frame = 0
The following BLAST results are available for this feature:
Pages
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|