MS025910 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACGCCGATTCCAGATCGCCATGGAACTGGAAAGGAATTTCAAACAATTATCAGAGGAAGGACCAAAACAAATTCTCTCTCCCCAACATTTTCGACGCCAATCGCCGGAAGCCCAATGAACCAATACTAGTCTTAGAGGCCGGCGGAGGAGCGGGGGTAGGCTGCGGCGTCGGCCTTGGTTTCGGTCTGGTCGGCGCCGGCTGGATTGGCCTCGGCGGCAACCTTCACCTGGTCTTCGGGCTCGATCTCGGCTGCGGCGTTGGCCTAGGGCTTGCAATCGGCCAAGGGATTGGCTACGGCTTTAGCTCCGAATCTTTACATTCTTATTTCTCGGATGATAACTCTGATTCCAAACATAGGCCTCTCATTCCAAACCTAAAATATCTAAAAAGAATTTAA ATGAACGCCGATTCCAGATCGCCATGGAACTGGAAAGGAATTTCAAACAATTATCAGAGGAAGGACCAAAACAAATTCTCTCTCCCCAACATTTTCGACGCCAATCGCCGGAAGCCCAATGAACCAATACTAGTCTTAGAGGCCGGCGGAGGAGCGGGGGTAGGCTGCGGCGTCGGCCTTGGTTTCGGTCTGGTCGGCGCCGGCTGGATTGGCCTCGGCGGCAACCTTCACCTGGTCTTCGGGCTCGATCTCGGCTGCGGCGTTGGCCTAGGGCTTGCAATCGGCCAAGGGATTGGCTACGGCTTTAGCTCCGAATCTTTACATTCTTATTTCTCGGATGATAACTCTGATTCCAAACATAGGCCTCTCATTCCAAACCTAAAATATCTAAAAAGAATTTAA ATGAACGCCGATTCCAGATCGCCATGGAACTGGAAAGGAATTTCAAACAATTATCAGAGGAAGGACCAAAACAAATTCTCTCTCCCCAACATTTTCGACGCCAATCGCCGGAAGCCCAATGAACCAATACTAGTCTTAGAGGCCGGCGGAGGAGCGGGGGTAGGCTGCGGCGTCGGCCTTGGTTTCGGTCTGGTCGGCGCCGGCTGGATTGGCCTCGGCGGCAACCTTCACCTGGTCTTCGGGCTCGATCTCGGCTGCGGCGTTGGCCTAGGGCTTGCAATCGGCCAAGGGATTGGCTACGGCTTTAGCTCCGAATCTTTACATTCTTATTTCTCGGATGATAACTCTGATTCCAAACATAGGCCTCTCATTCCAAACCTAAAATATCTAAAAAGAATTTAA MNADSRSPWNWKGISNNYQRKDQNKFSLPNIFDANRRKPNEPILVLEAGGGAGVGCGVGLGFGLVGAGWIGLGGNLHLVFGLDLGCGVGLGLAIGQGIGYGFSSESLHSYFSDDNSDSKHRPLIPNLKYLKRI Homology
BLAST of MS025910 vs. NCBI nr
Match: KAG6578355.1 (hypothetical protein SDJN03_22803, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 142.1 bits (357), Expect = 3.4e-30 Identity = 83/130 (63.85%), Postives = 95/130 (73.08%), Query Frame = 0
BLAST of MS025910 vs. NCBI nr
Match: GAV90122.1 (hypothetical protein CFOL_v3_33531 [Cephalotus follicularis]) HSP 1 Score: 110.5 bits (275), Expect = 1.1e-20 Identity = 64/126 (50.79%), Postives = 81/126 (64.29%), Query Frame = 0
BLAST of MS025910 vs. NCBI nr
Match: KAA0051071.1 (fibroin heavy chain [Cucumis melo var. makuwa] >TYK02741.1 fibroin heavy chain [Cucumis melo var. makuwa]) HSP 1 Score: 107.5 bits (267), Expect = 9.3e-20 Identity = 72/125 (57.60%), Postives = 77/125 (61.60%), Query Frame = 0
BLAST of MS025910 vs. NCBI nr
Match: XP_010108896.1 (keratin, type II cytoskeletal 5 [Morus notabilis] >EXC20536.1 hypothetical protein L484_027090 [Morus notabilis]) HSP 1 Score: 104.8 bits (260), Expect = 6.0e-19 Identity = 63/125 (50.40%), Postives = 77/125 (61.60%), Query Frame = 0
BLAST of MS025910 vs. NCBI nr
Match: XP_034209523.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic [Prunus dulcis] >VVA33668.1 PREDICTED: keratin type II cytoskeletal [Prunus dulcis]) HSP 1 Score: 103.6 bits (257), Expect = 1.3e-18 Identity = 58/123 (47.15%), Postives = 84/123 (68.29%), Query Frame = 0
BLAST of MS025910 vs. ExPASy TrEMBL
Match: A0A1Q3DCD5 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_33531 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 5.3e-21 Identity = 64/126 (50.79%), Postives = 81/126 (64.29%), Query Frame = 0
BLAST of MS025910 vs. ExPASy TrEMBL
Match: A0A5A7UC28 (Fibroin heavy chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00440 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 4.5e-20 Identity = 72/125 (57.60%), Postives = 77/125 (61.60%), Query Frame = 0
BLAST of MS025910 vs. ExPASy TrEMBL
Match: W9S8Y9 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_027090 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.9e-19 Identity = 63/125 (50.40%), Postives = 77/125 (61.60%), Query Frame = 0
BLAST of MS025910 vs. ExPASy TrEMBL
Match: A0A2N9FV55 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19064 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 6.5e-19 Identity = 65/130 (50.00%), Postives = 84/130 (64.62%), Query Frame = 0
BLAST of MS025910 vs. ExPASy TrEMBL
Match: A0A5N6QWW9 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_007887 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 1.4e-18 Identity = 61/128 (47.66%), Postives = 79/128 (61.72%), Query Frame = 0
BLAST of MS025910 vs. TAIR 10
Match: AT1G66820.1 (glycine-rich protein ) HSP 1 Score: 45.4 bits (106), Expect = 4.0e-05 Identity = 27/66 (40.91%), Postives = 37/66 (56.06%), Query Frame = 0
BLAST of MS025910 vs. TAIR 10
Match: AT4G10330.1 (glycine-rich protein ) HSP 1 Score: 44.3 bits (103), Expect = 9.0e-05 Identity = 28/63 (44.44%), Postives = 37/63 (58.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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