Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGTTCGTAGACATGGTTTCCCTTTTTCGCCACTGCCATACAATGATTCGAGGGGTATAAGTTCTGCTCTGGACCAAGACCATATGAGATCATGCATACGAAGTAGGAATCAAACTGGCCGATTTTCCTTTAGAAACAGGAGGTTTGAGGTTATGGATCCTCGAGATAGGATAGAGACAAGTGAATACTTTGATGGGCCTGTACATTCTGGTCAATTGAACGACTTACCTGGGGATGGCAACAATGACAATCAGAGAAGGTTTTTTTGACAGATATGAACATTTTCACTCATCCAGGCCTCAATACAATGATTCTGATGGTGAGAATTATCATAGTAATGCGGAGGATAGCCACAGGCCTTTCAGATTTTGTGCAGAGGATGGACCTCCAGAGTTTGATGAGAGAGGTAAGTTGAGGGAGAGGGAGTGTGATAGATGTGTAAAGAGCCAACCGGGAAATTTAACTAGACCAACCGGGGTCATCATCGAAGAGCATAAAGTAGAAGATTACAGGATGGTCGGCAGATGTGGAATGATCATGGTTTTGAAGATATCTCACAAAAGAAAAGAAAGATTTTGA
mRNA sequence
ATGCCAGTTCGTAGACATGGTTTCCCTTTTTCGCCACTGCCATACAATGATTCGAGGGGTATAAGTTCTGCTCTGGACCAAGACCATATGAGATCATGCATACGAAGTAGGAATCAAACTGGCCGATTTTCCTTTAGAAACAGGAGGTTTGAGGTTATGGATCCTCGAGATAGGATAGAGACAAGTGAATACTTTGATGGGCCTGTACATTCTGGTCAATTGAACGACTTACCTGGGGATGGCAACAATGACAATCAGAGAAGTAATGCGGAGGATAGCCACAGGCCTTTCAGATTTTGTGCAGAGGATGGACCTCCAGAGTTTGATGAGAGAGGTAAGTTGAGGGAGAGGGAGTGTGATAGATGTGTAAAGAGCCAACCGGGAAATTTAACTAGACCAACCGGGGTCATCATCGAAGAGCATAAAGTAGAAGATTACAGGATGGTCGGCAGATGTGGAATGATCATGGTTTTGAAGATATCTCACAAAAGAAAAGAAAGATTTTGA
Coding sequence (CDS)
ATGCCAGTTCGTAGACATGGTTTCCCTTTTTCGCCACTGCCATACAATGATTCGAGGGGTATAAGTTCTGCTCTGGACCAAGACCATATGAGATCATGCATACGAAGTAGGAATCAAACTGGCCGATTTTCCTTTAGAAACAGGAGGTTTGAGGTTATGGATCCTCGAGATAGGATAGAGACAAGTGAATACTTTGATGGGCCTGTACATTCTGGTCAATTGAACGACTTACCTGGGGATGGCAACAATGACAATCAGAGAAGTAATGCGGAGGATAGCCACAGGCCTTTCAGATTTTGTGCAGAGGATGGACCTCCAGAGTTTGATGAGAGAGGTAAGTTGAGGGAGAGGGAGTGTGATAGATGTGTAAAGAGCCAACCGGGAAATTTAACTAGACCAACCGGGGTCATCATCGAAGAGCATAAAGTAGAAGATTACAGGATGGTCGGCAGATGTGGAATGATCATGGTTTTGAAGATATCTCACAAAAGAAAAGAAAGATTTTGA
Protein sequence
MPVRRHGFPFSPLPYNDSRGISSALDQDHMRSCIRSRNQTGRFSFRNRRFEVMDPRDRIETSEYFDGPVHSGQLNDLPGDGNNDNQRSNAEDSHRPFRFCAEDGPPEFDERGKLRERECDRCVKSQPGNLTRPTGVIIEEHKVEDYRMVGRCGMIMVLKISHKRKERF
Homology
BLAST of MS025878 vs. NCBI nr
Match:
XP_022133555.1 (uncharacterized protein LOC111006113 isoform X2 [Momordica charantia])
HSP 1 Score: 212.6 bits (540), Expect = 2.6e-51
Identity = 110/172 (63.95%), Postives = 126/172 (73.26%), Query Frame = 0
Query: 1 MPVRRHGFPFSPLPYNDSRGISSALDQDHMRSCIRSRNQTGRFSFRNRRFEVMDPRDRIE 60
MPVRRHGFPFSPLP +D R + SA DQ HMRS IR RN++ R SFRNRRFE+MDPRDRIE
Sbjct: 1101 MPVRRHGFPFSPLPSSDLRDMRSAPDQGHMRSDIRCRNRSDRLSFRNRRFEIMDPRDRIE 1160
Query: 61 TSEYFDGPVHSGQLNDLPGDGNNDNQR-------------------------SNAEDSHR 120
+SEYFDGP QLN+L GDGN+D++R +NAEDS R
Sbjct: 1161 SSEYFDGP---SQLNELSGDGNDDDRRRFSDRHEHLHSFRPQYNDSDGENYHNNAEDSRR 1220
Query: 121 PFRFCAEDGPPEFDERGKLRERECDRCVKSQPGNLTRPTGVIIEEHKVEDYR 148
PFRFCAEDGPPEF ERG +RERE +R VK+QPGNLTR TGV+IEEH+VEDYR
Sbjct: 1221 PFRFCAEDGPPEFHERGNMREREFNRRVKNQPGNLTRRTGVVIEEHEVEDYR 1269
BLAST of MS025878 vs. NCBI nr
Match:
XP_022133556.1 (uncharacterized protein LOC111006113 isoform X3 [Momordica charantia])
HSP 1 Score: 212.6 bits (540), Expect = 2.6e-51
Identity = 110/172 (63.95%), Postives = 126/172 (73.26%), Query Frame = 0
Query: 1 MPVRRHGFPFSPLPYNDSRGISSALDQDHMRSCIRSRNQTGRFSFRNRRFEVMDPRDRIE 60
MPVRRHGFPFSPLP +D R + SA DQ HMRS IR RN++ R SFRNRRFE+MDPRDRIE
Sbjct: 1089 MPVRRHGFPFSPLPSSDLRDMRSAPDQGHMRSDIRCRNRSDRLSFRNRRFEIMDPRDRIE 1148
Query: 61 TSEYFDGPVHSGQLNDLPGDGNNDNQR-------------------------SNAEDSHR 120
+SEYFDGP QLN+L GDGN+D++R +NAEDS R
Sbjct: 1149 SSEYFDGP---SQLNELSGDGNDDDRRRFSDRHEHLHSFRPQYNDSDGENYHNNAEDSRR 1208
Query: 121 PFRFCAEDGPPEFDERGKLRERECDRCVKSQPGNLTRPTGVIIEEHKVEDYR 148
PFRFCAEDGPPEF ERG +RERE +R VK+QPGNLTR TGV+IEEH+VEDYR
Sbjct: 1209 PFRFCAEDGPPEFHERGNMREREFNRRVKNQPGNLTRRTGVVIEEHEVEDYR 1257
BLAST of MS025878 vs. NCBI nr
Match:
XP_022133554.1 (uncharacterized protein LOC111006113 isoform X1 [Momordica charantia])
HSP 1 Score: 212.6 bits (540), Expect = 2.6e-51
Identity = 110/172 (63.95%), Postives = 126/172 (73.26%), Query Frame = 0
Query: 1 MPVRRHGFPFSPLPYNDSRGISSALDQDHMRSCIRSRNQTGRFSFRNRRFEVMDPRDRIE 60
MPVRRHGFPFSPLP +D R + SA DQ HMRS IR RN++ R SFRNRRFE+MDPRDRIE
Sbjct: 1104 MPVRRHGFPFSPLPSSDLRDMRSAPDQGHMRSDIRCRNRSDRLSFRNRRFEIMDPRDRIE 1163
Query: 61 TSEYFDGPVHSGQLNDLPGDGNNDNQR-------------------------SNAEDSHR 120
+SEYFDGP QLN+L GDGN+D++R +NAEDS R
Sbjct: 1164 SSEYFDGP---SQLNELSGDGNDDDRRRFSDRHEHLHSFRPQYNDSDGENYHNNAEDSRR 1223
Query: 121 PFRFCAEDGPPEFDERGKLRERECDRCVKSQPGNLTRPTGVIIEEHKVEDYR 148
PFRFCAEDGPPEF ERG +RERE +R VK+QPGNLTR TGV+IEEH+VEDYR
Sbjct: 1224 PFRFCAEDGPPEFHERGNMREREFNRRVKNQPGNLTRRTGVVIEEHEVEDYR 1272
BLAST of MS025878 vs. NCBI nr
Match:
XP_022938519.1 (uncharacterized protein LOC111444729 isoform X1 [Cucurbita moschata] >XP_022938520.1 uncharacterized protein LOC111444729 isoform X1 [Cucurbita moschata])
HSP 1 Score: 174.1 bits (440), Expect = 1.0e-39
Identity = 98/173 (56.65%), Postives = 115/173 (66.47%), Query Frame = 0
Query: 1 MPVRRHGFPFSPLPYNDSRGISSALDQDHMRSCIRSRNQTGRFSFRNRRFEVMDPRD-RI 60
MPVRRHGFPF LP ND R + SA D HMR IRSRN+T R SFRNRRFE MDPRD RI
Sbjct: 1152 MPVRRHGFPFPSLPPNDLRDMGSARDHGHMRPGIRSRNRTERMSFRNRRFEDMDPRDNRI 1211
Query: 61 ETSEYFDGPVHSGQLNDLPGDGNND-------------------------NQRSNAEDSH 120
E++EYFDGPVH GQLN+L DGN+D N R++A++
Sbjct: 1212 ESNEYFDGPVHPGQLNELIDDGNDDDRRRFSDRHEHLHQFRPQCNDSDGENYRNDADERA 1271
Query: 121 RPFRFCAEDGPPEFDERGKLRERECDRCVKSQPGNLTRPTGVIIEEHKVEDYR 148
RP+R+C ED EF ERGK+RERE DR VK+QP NL R T +IEEH+VE+YR
Sbjct: 1272 RPYRYCTED-EEEFHERGKMREREFDRRVKNQPENLGRRT--VIEEHEVEEYR 1321
BLAST of MS025878 vs. NCBI nr
Match:
KAG6578731.1 (hypothetical protein SDJN03_23179, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 174.1 bits (440), Expect = 1.0e-39
Identity = 98/173 (56.65%), Postives = 115/173 (66.47%), Query Frame = 0
Query: 1 MPVRRHGFPFSPLPYNDSRGISSALDQDHMRSCIRSRNQTGRFSFRNRRFEVMDPRD-RI 60
MPVRRHGFPF LP ND R + SA D HMR IRSRN+T R SFRNRRFE MDPRD RI
Sbjct: 1087 MPVRRHGFPFPSLPPNDLRDMGSARDHGHMRPGIRSRNRTERMSFRNRRFEDMDPRDNRI 1146
Query: 61 ETSEYFDGPVHSGQLNDLPGDGNND-------------------------NQRSNAEDSH 120
E++EYFDGPVH GQLN+L DGN+D N R++A++
Sbjct: 1147 ESNEYFDGPVHPGQLNELIDDGNDDDRRRFSDRHEHLHQFRPQCNDSDGENYRNDADERA 1206
Query: 121 RPFRFCAEDGPPEFDERGKLRERECDRCVKSQPGNLTRPTGVIIEEHKVEDYR 148
RP+R+C ED EF ERGK+RERE DR VK+QP NL R T +IEEH+VE+YR
Sbjct: 1207 RPYRYCTED-EEEFHERGKMREREFDRRVKNQPENLGRRT--VIEEHEVEEYR 1256
BLAST of MS025878 vs. ExPASy TrEMBL
Match:
A0A6J1BWB0 (uncharacterized protein LOC111006113 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006113 PE=4 SV=1)
HSP 1 Score: 212.6 bits (540), Expect = 1.3e-51
Identity = 110/172 (63.95%), Postives = 126/172 (73.26%), Query Frame = 0
Query: 1 MPVRRHGFPFSPLPYNDSRGISSALDQDHMRSCIRSRNQTGRFSFRNRRFEVMDPRDRIE 60
MPVRRHGFPFSPLP +D R + SA DQ HMRS IR RN++ R SFRNRRFE+MDPRDRIE
Sbjct: 1104 MPVRRHGFPFSPLPSSDLRDMRSAPDQGHMRSDIRCRNRSDRLSFRNRRFEIMDPRDRIE 1163
Query: 61 TSEYFDGPVHSGQLNDLPGDGNNDNQR-------------------------SNAEDSHR 120
+SEYFDGP QLN+L GDGN+D++R +NAEDS R
Sbjct: 1164 SSEYFDGP---SQLNELSGDGNDDDRRRFSDRHEHLHSFRPQYNDSDGENYHNNAEDSRR 1223
Query: 121 PFRFCAEDGPPEFDERGKLRERECDRCVKSQPGNLTRPTGVIIEEHKVEDYR 148
PFRFCAEDGPPEF ERG +RERE +R VK+QPGNLTR TGV+IEEH+VEDYR
Sbjct: 1224 PFRFCAEDGPPEFHERGNMREREFNRRVKNQPGNLTRRTGVVIEEHEVEDYR 1272
BLAST of MS025878 vs. ExPASy TrEMBL
Match:
A0A6J1BVF8 (uncharacterized protein LOC111006113 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111006113 PE=4 SV=1)
HSP 1 Score: 212.6 bits (540), Expect = 1.3e-51
Identity = 110/172 (63.95%), Postives = 126/172 (73.26%), Query Frame = 0
Query: 1 MPVRRHGFPFSPLPYNDSRGISSALDQDHMRSCIRSRNQTGRFSFRNRRFEVMDPRDRIE 60
MPVRRHGFPFSPLP +D R + SA DQ HMRS IR RN++ R SFRNRRFE+MDPRDRIE
Sbjct: 1089 MPVRRHGFPFSPLPSSDLRDMRSAPDQGHMRSDIRCRNRSDRLSFRNRRFEIMDPRDRIE 1148
Query: 61 TSEYFDGPVHSGQLNDLPGDGNNDNQR-------------------------SNAEDSHR 120
+SEYFDGP QLN+L GDGN+D++R +NAEDS R
Sbjct: 1149 SSEYFDGP---SQLNELSGDGNDDDRRRFSDRHEHLHSFRPQYNDSDGENYHNNAEDSRR 1208
Query: 121 PFRFCAEDGPPEFDERGKLRERECDRCVKSQPGNLTRPTGVIIEEHKVEDYR 148
PFRFCAEDGPPEF ERG +RERE +R VK+QPGNLTR TGV+IEEH+VEDYR
Sbjct: 1209 PFRFCAEDGPPEFHERGNMREREFNRRVKNQPGNLTRRTGVVIEEHEVEDYR 1257
BLAST of MS025878 vs. ExPASy TrEMBL
Match:
A0A6J1BVK8 (uncharacterized protein LOC111006113 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006113 PE=4 SV=1)
HSP 1 Score: 212.6 bits (540), Expect = 1.3e-51
Identity = 110/172 (63.95%), Postives = 126/172 (73.26%), Query Frame = 0
Query: 1 MPVRRHGFPFSPLPYNDSRGISSALDQDHMRSCIRSRNQTGRFSFRNRRFEVMDPRDRIE 60
MPVRRHGFPFSPLP +D R + SA DQ HMRS IR RN++ R SFRNRRFE+MDPRDRIE
Sbjct: 1101 MPVRRHGFPFSPLPSSDLRDMRSAPDQGHMRSDIRCRNRSDRLSFRNRRFEIMDPRDRIE 1160
Query: 61 TSEYFDGPVHSGQLNDLPGDGNNDNQR-------------------------SNAEDSHR 120
+SEYFDGP QLN+L GDGN+D++R +NAEDS R
Sbjct: 1161 SSEYFDGP---SQLNELSGDGNDDDRRRFSDRHEHLHSFRPQYNDSDGENYHNNAEDSRR 1220
Query: 121 PFRFCAEDGPPEFDERGKLRERECDRCVKSQPGNLTRPTGVIIEEHKVEDYR 148
PFRFCAEDGPPEF ERG +RERE +R VK+QPGNLTR TGV+IEEH+VEDYR
Sbjct: 1221 PFRFCAEDGPPEFHERGNMREREFNRRVKNQPGNLTRRTGVVIEEHEVEDYR 1269
BLAST of MS025878 vs. ExPASy TrEMBL
Match:
A0A6J1FEB1 (uncharacterized protein LOC111444729 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444729 PE=4 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 4.9e-40
Identity = 98/173 (56.65%), Postives = 115/173 (66.47%), Query Frame = 0
Query: 1 MPVRRHGFPFSPLPYNDSRGISSALDQDHMRSCIRSRNQTGRFSFRNRRFEVMDPRD-RI 60
MPVRRHGFPF LP ND R + SA D HMR IRSRN+T R SFRNRRFE MDPRD RI
Sbjct: 1152 MPVRRHGFPFPSLPPNDLRDMGSARDHGHMRPGIRSRNRTERMSFRNRRFEDMDPRDNRI 1211
Query: 61 ETSEYFDGPVHSGQLNDLPGDGNND-------------------------NQRSNAEDSH 120
E++EYFDGPVH GQLN+L DGN+D N R++A++
Sbjct: 1212 ESNEYFDGPVHPGQLNELIDDGNDDDRRRFSDRHEHLHQFRPQCNDSDGENYRNDADERA 1271
Query: 121 RPFRFCAEDGPPEFDERGKLRERECDRCVKSQPGNLTRPTGVIIEEHKVEDYR 148
RP+R+C ED EF ERGK+RERE DR VK+QP NL R T +IEEH+VE+YR
Sbjct: 1272 RPYRYCTED-EEEFHERGKMREREFDRRVKNQPENLGRRT--VIEEHEVEEYR 1321
BLAST of MS025878 vs. ExPASy TrEMBL
Match:
A0A6J1FDD8 (uncharacterized protein LOC111444729 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444729 PE=4 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 4.9e-40
Identity = 98/173 (56.65%), Postives = 115/173 (66.47%), Query Frame = 0
Query: 1 MPVRRHGFPFSPLPYNDSRGISSALDQDHMRSCIRSRNQTGRFSFRNRRFEVMDPRD-RI 60
MPVRRHGFPF LP ND R + SA D HMR IRSRN+T R SFRNRRFE MDPRD RI
Sbjct: 1130 MPVRRHGFPFPSLPPNDLRDMGSARDHGHMRPGIRSRNRTERMSFRNRRFEDMDPRDNRI 1189
Query: 61 ETSEYFDGPVHSGQLNDLPGDGNND-------------------------NQRSNAEDSH 120
E++EYFDGPVH GQLN+L DGN+D N R++A++
Sbjct: 1190 ESNEYFDGPVHPGQLNELIDDGNDDDRRRFSDRHEHLHQFRPQCNDSDGENYRNDADERA 1249
Query: 121 RPFRFCAEDGPPEFDERGKLRERECDRCVKSQPGNLTRPTGVIIEEHKVEDYR 148
RP+R+C ED EF ERGK+RERE DR VK+QP NL R T +IEEH+VE+YR
Sbjct: 1250 RPYRYCTED-EEEFHERGKMREREFDRRVKNQPENLGRRT--VIEEHEVEEYR 1299
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022133555.1 | 2.6e-51 | 63.95 | uncharacterized protein LOC111006113 isoform X2 [Momordica charantia] | [more] |
XP_022133556.1 | 2.6e-51 | 63.95 | uncharacterized protein LOC111006113 isoform X3 [Momordica charantia] | [more] |
XP_022133554.1 | 2.6e-51 | 63.95 | uncharacterized protein LOC111006113 isoform X1 [Momordica charantia] | [more] |
XP_022938519.1 | 1.0e-39 | 56.65 | uncharacterized protein LOC111444729 isoform X1 [Cucurbita moschata] >XP_0229385... | [more] |
KAG6578731.1 | 1.0e-39 | 56.65 | hypothetical protein SDJN03_23179, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1BWB0 | 1.3e-51 | 63.95 | uncharacterized protein LOC111006113 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1BVF8 | 1.3e-51 | 63.95 | uncharacterized protein LOC111006113 isoform X3 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1BVK8 | 1.3e-51 | 63.95 | uncharacterized protein LOC111006113 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1FEB1 | 4.9e-40 | 56.65 | uncharacterized protein LOC111444729 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1FDD8 | 4.9e-40 | 56.65 | uncharacterized protein LOC111444729 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
Match Name | E-value | Identity | Description | |