MS025852 (gene) Bitter gourd (TR) v1

Overview


Name	MS025852
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold943_1: 114373 .. 115038 (-)
RNA-Seq Expression	MS025852
Synteny	MS025852

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAGTCGGATTCCAAGAACGACAGCAAATTACGGAACCACAGATTGTTAACACCATACTCTGTGTGATGTACAAACGTGTCACCACCATAGCTGTGCGGGAGAGACGTCGAAGACTGTTGCCTGAAACCTATAATCTGTCGAGGGACAGACCTGCCACTGACTGTCGGAAACATCCGTCTATCCGTCAGGGTCTTGTACAGCTCGGCGCGTCCCTGCATCCAAAATCGTCGTCCTTCTTGGTTGGTCACCTACTTCTATAAAATGGAAGGACTCTGATCACTACCAAGTAAGTGGAAGACCCATCACTTAAAACTCAAGGTGTCTACTTCTTGGTTGGCCATCCAAAATCGTCGTCCTTTTGAAAGTCAAGTAATAAACTTATGATTCAACCTTGATTACTTAATTAATTGATAAATTGCAGCCATGGGTAAAAATCAATTACATTTACATTAAAGCCAAGTAAGGTACATAGTCAAGTAAATTTCAGATTATGAACCTAAAGGCTAAAACTAAATTGGAAATTGCAACAGCGGAACCCAAAGGGAAAGCAAAACGACAAAAGGAACAGAAACGGAAGAGAGAGGGAAAGTGGGGTCCGTCGTACACGCCCGACACATCGGCAACCGGATCTTGACCTTATCTTTGATTTGACCATCCGTTGA

mRNA sequence

ATGCGAGTCGGATTCCAAGAACGACAGCAAATTACGGAACCACAGATTGTTAACACCATACTCTGTGTGATGTACAAACGTGTCACCACCATAGCTGTGCGGGAGAGACGTCGAAGACTGTTGCCTGAAACCTATAATCTGTCGAGGGACAGACCTGCCACTGACTGTCGGAAACATCCGTCTATCCGTCAGGGTCTTGTACAGCTCGGCGCGTCCCTGCATCCAAAATCGTCGTCCTTCTTGCGGAACCCAAAGGGAAAGCAAAACGACAAAAGGAACAGAAACGGAAGAGAGAGGGAAAGTGGGGTCCGTCGTACACGCCCGACACATCGGCAACCGGATCTTGACCTTATCTTTGATTTGACCATCCGTTGA

Coding sequence (CDS)

ATGCGAGTCGGATTCCAAGAACGACAGCAAATTACGGAACCACAGATTGTTAACACCATACTCTGTGTGATGTACAAACGTGTCACCACCATAGCTGTGCGGGAGAGACGTCGAAGACTGTTGCCTGAAACCTATAATCTGTCGAGGGACAGACCTGCCACTGACTGTCGGAAACATCCGTCTATCCGTCAGGGTCTTGTACAGCTCGGCGCGTCCCTGCATCCAAAATCGTCGTCCTTCTTGCGGAACCCAAAGGGAAAGCAAAACGACAAAAGGAACAGAAACGGAAGAGAGAGGGAAAGTGGGGTCCGTCGTACACGCCCGACACATCGGCAACCGGATCTTGACCTTATCTTTGATTTGACCATCCGTTGA

Protein sequence

MRVGFQERQQITEPQIVNTILCVMYKRVTTIAVRERRRRLLPETYNLSRDRPATDCRKHPSIRQGLVQLGASLHPKSSSFLRNPKGKQNDKRNRNGRERESGVRRTRPTHRQPDLDLIFDLTIR

Homology

The following BLAST results are available for this feature:

BLAST of MS025852 vs.


Match Name	E-value	Identity	Description

BLAST of MS025852 vs.


Match Name	E-value	Identity	Description

BLAST of MS025852 vs.


Match Name	E-value	Identity	Description

BLAST of MS025852 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS025852.1	MS025852.1	mRNA