MS025801 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCAGGGTTCTCTTAATTTTCTTGGTGGCTCTAGTGCTGGTTCGACCCGGAGCGGTGGCGACCCCTCTTCTGTTGCCATTCGAAAGATGGCATATCCATGTGGTTAATGGGTTGAGCAACGCCACCTTGTTTGTGCATTGTAAGTCGAAGGACGATGATTTGGGTGACCATAACCTACTTGGACGTGGTGATGAGTTTCAATGGACTTTTAAGACCAACTTTTGGATGACAACGTTGTATTGGTGTTTTATGCACAAGCCGAATGCTGATGTGTCATTTGATTCATTCTGGATTGAGAAGAGGCATATGTGGCTCAATTATAGATGCACGGATAAAAATTGCATTTGGATTGCTAAAGATGACGGAATTTACCTGAGAAACAATCCCGATAATTATGATGAGTTTGTTAAACCCTGGGTCAAGAAGAGTAGTTGA ATGACCAGGGTTCTCTTAATTTTCTTGGTGGCTCTAGTGCTGGTTCGACCCGGAGCGGTGGCGACCCCTCTTCTGTTGCCATTCGAAAGATGGCATATCCATGTGGTTAATGGGTTGAGCAACGCCACCTTGTTTGTGCATTGTAAGTCGAAGGACGATGATTTGGGTGACCATAACCTACTTGGACGTGGTGATGAGTTTCAATGGACTTTTAAGACCAACTTTTGGATGACAACGTTGTATTGGTGTTTTATGCACAAGCCGAATGCTGATGTGTCATTTGATTCATTCTGGATTGAGAAGAGGCATATGTGGCTCAATTATAGATGCACGGATAAAAATTGCATTTGGATTGCTAAAGATGACGGAATTTACCTGAGAAACAATCCCGATAATTATGATGAGTTTGTTAAACCCTGGGTCAAGAAGAGTAGTTGA ATGACCAGGGTTCTCTTAATTTTCTTGGTGGCTCTAGTGCTGGTTCGACCCGGAGCGGTGGCGACCCCTCTTCTGTTGCCATTCGAAAGATGGCATATCCATGTGGTTAATGGGTTGAGCAACGCCACCTTGTTTGTGCATTGTAAGTCGAAGGACGATGATTTGGGTGACCATAACCTACTTGGACGTGGTGATGAGTTTCAATGGACTTTTAAGACCAACTTTTGGATGACAACGTTGTATTGGTGTTTTATGCACAAGCCGAATGCTGATGTGTCATTTGATTCATTCTGGATTGAGAAGAGGCATATGTGGCTCAATTATAGATGCACGGATAAAAATTGCATTTGGATTGCTAAAGATGACGGAATTTACCTGAGAAACAATCCCGATAATTATGATGAGTTTGTTAAACCCTGGGTCAAGAAGAGTAGTTGA MTRVLLIFLVALVLVRPGAVATPLLLPFERWHIHVVNGLSNATLFVHCKSKDDDLGDHNLLGRGDEFQWTFKTNFWMTTLYWCFMHKPNADVSFDSFWIEKRHMWLNYRCTDKNCIWIAKDDGIYLRNNPDNYDEFVKPWVKKSS Homology
BLAST of MS025801 vs. NCBI nr
Match: XP_022155194.1 (S-protein homolog 1-like [Momordica charantia]) HSP 1 Score: 229.2 bits (583), Expect = 2.3e-56 Identity = 104/141 (73.76%), Postives = 116/141 (82.27%), Query Frame = 0
BLAST of MS025801 vs. NCBI nr
Match: XP_022143645.1 (S-protein homolog 1-like [Momordica charantia]) HSP 1 Score: 214.9 bits (546), Expect = 4.5e-52 Identity = 96/144 (66.67%), Postives = 114/144 (79.17%), Query Frame = 0
BLAST of MS025801 vs. NCBI nr
Match: XP_038896407.1 (S-protein homolog 1-like [Benincasa hispida]) HSP 1 Score: 209.9 bits (533), Expect = 1.4e-50 Identity = 91/143 (63.64%), Postives = 111/143 (77.62%), Query Frame = 0
BLAST of MS025801 vs. NCBI nr
Match: XP_008461539.1 (PREDICTED: uncharacterized protein LOC103500111 [Cucumis melo]) HSP 1 Score: 201.4 bits (511), Expect = 5.2e-48 Identity = 92/138 (66.67%), Postives = 107/138 (77.54%), Query Frame = 0
BLAST of MS025801 vs. NCBI nr
Match: XP_023004728.1 (S-protein homolog 1-like [Cucurbita maxima]) HSP 1 Score: 200.3 bits (508), Expect = 1.1e-47 Identity = 87/135 (64.44%), Postives = 106/135 (78.52%), Query Frame = 0
BLAST of MS025801 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 7.8e-23 Identity = 52/125 (41.60%), Postives = 74/125 (59.20%), Query Frame = 0
BLAST of MS025801 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 7.3e-21 Identity = 51/129 (39.53%), Postives = 72/129 (55.81%), Query Frame = 0
BLAST of MS025801 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 8.9e-11 Identity = 39/123 (31.71%), Postives = 60/123 (48.78%), Query Frame = 0
BLAST of MS025801 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 9.2e-08 Identity = 36/117 (30.77%), Postives = 56/117 (47.86%), Query Frame = 0
BLAST of MS025801 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 4.6e-07 Identity = 31/95 (32.63%), Postives = 50/95 (52.63%), Query Frame = 0
BLAST of MS025801 vs. ExPASy TrEMBL
Match: A0A6J1DPJ1 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022329 PE=3 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 1.1e-56 Identity = 104/141 (73.76%), Postives = 116/141 (82.27%), Query Frame = 0
BLAST of MS025801 vs. ExPASy TrEMBL
Match: A0A6J1CPC6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013506 PE=3 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 2.2e-52 Identity = 96/144 (66.67%), Postives = 114/144 (79.17%), Query Frame = 0
BLAST of MS025801 vs. ExPASy TrEMBL
Match: A0A1S3CEQ0 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500111 PE=3 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 2.5e-48 Identity = 92/138 (66.67%), Postives = 107/138 (77.54%), Query Frame = 0
BLAST of MS025801 vs. ExPASy TrEMBL
Match: A0A6J1L0E8 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111497942 PE=3 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 5.6e-48 Identity = 87/135 (64.44%), Postives = 106/135 (78.52%), Query Frame = 0
BLAST of MS025801 vs. ExPASy TrEMBL
Match: A0A6J1H9E9 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111460817 PE=3 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 4.7e-47 Identity = 86/135 (63.70%), Postives = 105/135 (77.78%), Query Frame = 0
BLAST of MS025801 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 108.2 bits (269), Expect = 5.5e-24 Identity = 52/125 (41.60%), Postives = 74/125 (59.20%), Query Frame = 0
BLAST of MS025801 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 101.7 bits (252), Expect = 5.2e-22 Identity = 51/129 (39.53%), Postives = 72/129 (55.81%), Query Frame = 0
BLAST of MS025801 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 68.2 bits (165), Expect = 6.3e-12 Identity = 39/123 (31.71%), Postives = 60/123 (48.78%), Query Frame = 0
BLAST of MS025801 vs. TAIR 10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 68.2 bits (165), Expect = 6.3e-12 Identity = 40/111 (36.04%), Postives = 56/111 (50.45%), Query Frame = 0
BLAST of MS025801 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 64.3 bits (155), Expect = 9.2e-11 Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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