MS025748 (gene) Bitter gourd (TR) v1

Overview


Name	MS025748
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	photosynthetic NDH subunit of subcomplex B 1, chloroplastic
Location	scaffold813: 748133 .. 751303 (-)
RNA-Seq Expression	MS025748
Synteny	MS025748

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATGGCTACTTCTTCTCTACCCACCAAATCCCTCCCGCCATTTCTCCCAAGCTCAGCCTCCCCACCTTCTTCTCCTTCAACCCACTTCACCAAGCCGCTCTTTCTAGCCCCACCCGACATTTCTCCTCTCTCCACTACCCCATCACCACCAAAATCTCACATCCGCACTGCCAAAAAGAACCCATGGTTCGATCCTTTCGACGACGGAGACGATCCGGACATGGAATACGGCTCTCTCTTCGCCGACGGCAAGCAGGAGGAGGACCCTCGGCCGCCCGACAACCCCAATAATCCCTATGGGTTCTTGAAATTTCCTCAGGGCTACATGGTGGAGATCGCTTCTCTGGGTCTGAAACTCCGGGGAGATGTCCGGCGGTGCTGCTGCGTGATCTCCGGCGGCGTCTACGAGAACTTACTCTTCTTTCCGGCCATTCAATTGCTCAAGGATCGGTACCCGGGAGTCCAGATAGACGTGGTGGCTTCGGCCAGGGGAAAACAGACTTATGAACTGAACAAGAATGTGAGATGGTCTAATGTCTACGACCCGGATGATTATTTTCCTGAACCAGCAGAGTACACTGACATGGTTGGATTGCTCAAGGTTGGTTCATCTCCTCTGCAACATCTGACCTTGAAAATTGAAATTGAAGCCGGGTTCTAGGGATTGAGCTTCTTTAACTTAGATATTAATGGACATTAATGGCTTTTTTCTTTTCCTCTGACTCCTGTCTTGTGATGGTCGAAGAAATCAGAAAAATTTCAGTACAATGGTAGCATGTTAAATCACAGATGGACCCAAAAGTGCTCTAATACAATTTTAAACACGATAAAATTACCAATGAATCCAAAAACTTTAAGTTGAAGGCTTAAACTAATGAAAATACTTTCATGTCAATAGCATTCAAGAAAGGTGTGGGGTTCCTTAAATAAAATAACACATTACTTGACGAGGATGTGTCAAATTGTGAATGGAAAGAATATGTATTACTGTAGTACTAGAAAATTTCCCAAGGAAATTGGGACTGATTTGAGTGCTGCAACTTGTTTCCTTGTTTGTTGCAGAGTAGGTACTATGACATGGTCTTGTCAACCAAGCTAGCAGGGGTTGGGCATGCAGTGTTTTTGTTTATGACAACAGCCAGAGATAGAGTGAGCTACATTTACCCAGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTGAAACATTTAAACCAGATAGCTCCAATCTTTCTGAGGGAGGGTTCAACATGTGAGGATATTTTATGTTTTTGCTAAGAATTCGTCAAAAAGAATCTTATATACTCTTTCTCTCTTAGTTGCAGATGCCCATGTTTTGATTCGAAAGCCTTGACCTGAATCCATCAACTTAAATTTTTGGGTGATTTAATATGCTTAAGATGGTAACCATTATGGGATGATGTAGTGGTCAATAAGGGCCAATGTAAATAGGAAAGGGCTTAGAGGGAAGGCTGCAAACTGGCCCGGTCACACAGATATTAAAAAAAAAAAACAAAAAAAAAAAGCTTAAGATGGTATCAGAGTAGGAGGTTCTGTGTTCGAACCCTTGGGTTGTCATCTCCTTCCCGTTTAATATTGATTTCGACTTGTTGGGCCTTTTGCAAATTTTCAAGCCCACAAATGAGAGGAGTATTAGATATCTTATGAATGATTAAATTTACCCTAAATTTGAACTTTTAGGTTCATTGGGTGATTTAACATTTAACATATTTGATGTTAGTTTTATATAGTATAAAGTAATTCTTTGTGATGTCATTTTCTTTCCAATTAATATTGATAGTTGGTATCATGATAATTTTCAAACTCATGAAGGAGGGCAACGATAATGCGTATAAAAGATCAAATATATCGTAACTTATTGGTATAAGCTTTTAGGTTTGGTATATACCAAGTTTTTAGGTTTAGTGCATAGTTTAAAGTTCTAAATTCATAAACATTAGATTATTCGTCTAATCTTACTTGATATGTGGAGTACGTTTTACCAGTAAATGAGTGAGGTACGGCTTTTATCATGATAACAAGAAGTAGTTTCTAAGTGAAAAGTTAAAACTGAAGAACTAAAGAGAAATAGCTAGCTCAAATTATTACTTCTTTTCATGTCTTGAAGGCTAATTTCCATGATTTAGGTATCATCAAATGGTTGATTGGTTGGGGAGGCCATTTCGCAGCGTTCCTAGGCATCCTGTACCTCCGCTCAAAGTTTCGATTTCGAGAAAACTGAAGGAGGTTGTAGAGGAGAAGTATAAGAAAGCAGGTGCTGAGAAAGGAAAATATATTGTGATTCATGGGATAGAATCAGATTCCAAAGCCTCAATGCAGTCCAAAGGTGATACTGATAGCTTGCTGCCCATTCAAGCCTGGGCTGAAATAGCCAGTACTATAAGGTAGATATTATGTCAGTTCCTTACTTATAACCTGAAGGTAATTAAAAGTAACATGATTCTGCTTCTCCTTTCACTCTTTTTCTGATGATAACACTTTGTTATTGAATCTAAAAACAGGGGATTCAAACCAGTTTTTGTCATCCCACATGAAAAAGAAAGAGAGAATGTCGAGGAAGAGGTTGGGGATGATGCTAGCATCGTATTTATCACAACCCCGGGACAGGTATTGATGATGATCCATCATCTTCTTTAAGTATCAAAAAAGATGGATGCAGAAGAACAATCTTGAATAAGAAAGAAAGGGAATTAACACCTAACAGTTAAATCAGTTGATGAAAGTCAATGATCTCACCACACCATTCTTAACTGCCATCTGCAGCTAGCTGCTCTCATTAACGACTCGGCTGGTCTAATAGCCACCAACACAGCTGCTATCCAACTCGCCATTGCTCGCGAAAAACCGAGGTCTTGATTTGTTTCTCTTTCACATGAACTCAGTAGTTTGCTTCCTGACCTTAAAATCTTCCATTTGCTAGAAGTTTAAAAAGGAACTGTCCTTGACATGTGTCTGTGGTGCCATTCTGTTTGCAGCATTGCTTTGTTTTCCTCTGATGAGAAAGCAAAACTATTCGTTCCCGATGCCGAGGCAAAGAGATGCATCACGGTTTCATCAGCGACAGGACGACTAATCGACATCGATATGGGCACGGTTAAAAGGGCCATACAGAGTTTTGAAGTGCCGCTAGCTCTTGCTTTTTAG

mRNA sequence

ATGGCCATGGCTACTTCTTCTCTACCCACCAAATCCCTCCCGCCATTTCTCCCAAGCTCAGCCTCCCCACCTTCTTCTCCTTCAACCCACTTCACCAAGCCGCTCTTTCTAGCCCCACCCGACATTTCTCCTCTCTCCACTACCCCATCACCACCAAAATCTCACATCCGCACTGCCAAAAAGAACCCATGGTTCGATCCTTTCGACGACGGAGACGATCCGGACATGGAATACGGCTCTCTCTTCGCCGACGGCAAGCAGGAGGAGGACCCTCGGCCGCCCGACAACCCCAATAATCCCTATGGGTTCTTGAAATTTCCTCAGGGCTACATGGTGGAGATCGCTTCTCTGGGTCTGAAACTCCGGGGAGATGTCCGGCGGTGCTGCTGCGTGATCTCCGGCGGCGTCTACGAGAACTTACTCTTCTTTCCGGCCATTCAATTGCTCAAGGATCGGTACCCGGGAGTCCAGATAGACGTGGTGGCTTCGGCCAGGGGAAAACAGACTTATGAACTGAACAAGAATGTGAGATGGTCTAATGTCTACGACCCGGATGATTATTTTCCTGAACCAGCAGAGTACACTGACATGGTTGGATTGCTCAAGAGTAGGTACTATGACATGGTCTTGTCAACCAAGCTAGCAGGGGTTGGGCATGCAGTGTTTTTGTTTATGACAACAGCCAGAGATAGAGTGAGCTACATTTACCCAGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTGAAACATTTAAACCAGATAGCTCCAATCTTTCTGAGGGAGGGTTCAACATGTATCATCAAATGGTTGATTGGTTGGGGAGGCCATTTCGCAGCGTTCCTAGGCATCCTGTACCTCCGCTCAAAGTTTCGATTTCGAGAAAACTGAAGGAGGTTGTAGAGGAGAAGTATAAGAAAGCAGGTGCTGAGAAAGGAAAATATATTGTGATTCATGGGATAGAATCAGATTCCAAAGCCTCAATGCAGTCCAAAGGTGATACTGATAGCTTGCTGCCCATTCAAGCCTGGGCTGAAATAGCCAGTACTATAAGGGGATTCAAACCAGTTTTTGTCATCCCACATGAAAAAGAAAGAGAGAATGTCGAGGAAGAGGTTGGGGATGATGCTAGCATCGTATTTATCACAACCCCGGGACAGCTAGCTGCTCTCATTAACGACTCGGCTGGTCTAATAGCCACCAACACAGCTGCTATCCAACTCGCCATTGCTCGCGAAAAACCGAGCATTGCTTTGTTTTCCTCTGATGAGAAAGCAAAACTATTCGTTCCCGATGCCGAGGCAAAGAGATGCATCACGGTTTCATCAGCGACAGGACGACTAATCGACATCGATATGGGCACGGTTAAAAGGGCCATACAGAGTTTTGAAGTGCCGCTAGCTCTTGCTTTTTAG

Coding sequence (CDS)

ATGGCCATGGCTACTTCTTCTCTACCCACCAAATCCCTCCCGCCATTTCTCCCAAGCTCAGCCTCCCCACCTTCTTCTCCTTCAACCCACTTCACCAAGCCGCTCTTTCTAGCCCCACCCGACATTTCTCCTCTCTCCACTACCCCATCACCACCAAAATCTCACATCCGCACTGCCAAAAAGAACCCATGGTTCGATCCTTTCGACGACGGAGACGATCCGGACATGGAATACGGCTCTCTCTTCGCCGACGGCAAGCAGGAGGAGGACCCTCGGCCGCCCGACAACCCCAATAATCCCTATGGGTTCTTGAAATTTCCTCAGGGCTACATGGTGGAGATCGCTTCTCTGGGTCTGAAACTCCGGGGAGATGTCCGGCGGTGCTGCTGCGTGATCTCCGGCGGCGTCTACGAGAACTTACTCTTCTTTCCGGCCATTCAATTGCTCAAGGATCGGTACCCGGGAGTCCAGATAGACGTGGTGGCTTCGGCCAGGGGAAAACAGACTTATGAACTGAACAAGAATGTGAGATGGTCTAATGTCTACGACCCGGATGATTATTTTCCTGAACCAGCAGAGTACACTGACATGGTTGGATTGCTCAAGAGTAGGTACTATGACATGGTCTTGTCAACCAAGCTAGCAGGGGTTGGGCATGCAGTGTTTTTGTTTATGACAACAGCCAGAGATAGAGTGAGCTACATTTACCCAGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTGAAACATTTAAACCAGATAGCTCCAATCTTTCTGAGGGAGGGTTCAACATGTATCATCAAATGGTTGATTGGTTGGGGAGGCCATTTCGCAGCGTTCCTAGGCATCCTGTACCTCCGCTCAAAGTTTCGATTTCGAGAAAACTGAAGGAGGTTGTAGAGGAGAAGTATAAGAAAGCAGGTGCTGAGAAAGGAAAATATATTGTGATTCATGGGATAGAATCAGATTCCAAAGCCTCAATGCAGTCCAAAGGTGATACTGATAGCTTGCTGCCCATTCAAGCCTGGGCTGAAATAGCCAGTACTATAAGGGGATTCAAACCAGTTTTTGTCATCCCACATGAAAAAGAAAGAGAGAATGTCGAGGAAGAGGTTGGGGATGATGCTAGCATCGTATTTATCACAACCCCGGGACAGCTAGCTGCTCTCATTAACGACTCGGCTGGTCTAATAGCCACCAACACAGCTGCTATCCAACTCGCCATTGCTCGCGAAAAACCGAGCATTGCTTTGTTTTCCTCTGATGAGAAAGCAAAACTATTCGTTCCCGATGCCGAGGCAAAGAGATGCATCACGGTTTCATCAGCGACAGGACGACTAATCGACATCGATATGGGCACGGTTAAAAGGGCCATACAGAGTTTTGAAGTGCCGCTAGCTCTTGCTTTTTAG

Protein sequence

MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFSSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF

Homology

[Close]

BLAST of MS025748 vs. NCBI nr
Match: XP_022145001.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Momordica charantia])

HSP 1 Score: 927.9 bits (2397), Expect = 3.4e-266
Identity = 466/471 (98.94%), Postives = 468/471 (99.36%), Query Frame = 0


Query: 1   MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAK 60
           MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHI TAK
Sbjct: 1   MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAK 60

Query: 61  KNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLK 120
           KNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLK
Sbjct: 61  KNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLK 120

Query: 121 LRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSN 180
           LRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSN
Sbjct: 121 LRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSN 180

Query: 181 VYDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVN 240
           VYDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVN
Sbjct: 181 VYDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVN 240

Query: 241 AAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEV 300
           AAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKV ISRKLKEV
Sbjct: 241 AAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEV 300

Query: 301 VEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVI 360
           VEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVI
Sbjct: 301 VEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVI 360

Query: 361 PHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALF 420
           PHEKERENVEEEVGDDA I+FITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALF
Sbjct: 361 PHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALF 420

Query: 421 SSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 472
           SSDEKAKLFVPDAE+KRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Sbjct: 421 SSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 471

[Close]

BLAST of MS025748 vs. NCBI nr
Match: XP_022953552.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 870.5 bits (2248), Expect = 6.4e-249
Identity = 435/470 (92.55%), Postives = 453/470 (96.38%), Query Frame = 0


Query: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRT-AKK 62
           MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HI + AKK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 63  NPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 122
           NPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLKL
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 120

Query: 123 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 182
           RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 183 YDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNA 242
           YDPDDYFPEPA+YTDMVGLLK RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 243 AGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV 302
           AGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKE+V
Sbjct: 241 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 303 EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIP 362
           +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 363 HEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFS 422
           HEKERENVEEEVGD+ASIVFITTPGQLAALINDSAG+IATNTAAIQLAIAREKPSIALF 
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 423 SDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 472
           S+EKAKLFVPD+EAKRCI VSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Sbjct: 421 SEEKAKLFVPDSEAKRCIAVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 470

[Close]

BLAST of MS025748 vs. NCBI nr
Match: KAG6575629.1 (Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014183.1 Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 870.2 bits (2247), Expect = 8.4e-249
Identity = 435/470 (92.55%), Postives = 452/470 (96.17%), Query Frame = 0


Query: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRT-AKK 62
           MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HI + AKK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 63  NPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 122
           NPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLKL
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 120

Query: 123 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 182
           RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 183 YDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNA 242
           YDPDDYFPEPA+YTDMVGLLK RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 243 AGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV 302
           AGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKE+V
Sbjct: 241 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 303 EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIP 362
           +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 363 HEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFS 422
           HEKERENVEEEVGD+ASIVFITTPGQLAALINDSAG+IATNTAAIQLAIAREKPSIALF 
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 423 SDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 472
           S+EKAKLFVPDAEAKRCI VSS TGRLIDIDMGTVKRAIQSFEVPLALAF
Sbjct: 421 SEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAF 470

[Close]

BLAST of MS025748 vs. NCBI nr
Match: XP_022992479.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 867.5 bits (2240), Expect = 5.4e-248
Identity = 434/470 (92.34%), Postives = 451/470 (95.96%), Query Frame = 0


Query: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRT-AKK 62
           MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HI + AKK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 63  NPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 122
           NPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 120

Query: 123 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 182
           RGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 183 YDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNA 242
           YDPDDYFPEPA+YTDMVGLLK RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 243 AGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV 302
           AGAGLFLS+TFKP+SSNLSEGGFNMYHQM DWLGRPFRSVPRHPVPPLKVSISRKLKE+V
Sbjct: 241 AGAGLFLSQTFKPESSNLSEGGFNMYHQMADWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 303 EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIP 362
           +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 363 HEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFS 422
           HEKERENVEEEVGD+ASIVFITTPGQLAALINDSAG+IATNTAAIQLAIAREKPSIALF 
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 423 SDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 472
           S+EKAKLFVPDAEAKRCI VSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Sbjct: 421 SEEKAKLFVPDAEAKRCIAVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 470

[Close]

BLAST of MS025748 vs. NCBI nr
Match: XP_038896546.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 866.3 bits (2237), Expect = 1.2e-247
Identity = 434/469 (92.54%), Postives = 451/469 (96.16%), Query Frame = 0


Query: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKN 62
           MATSSLPTKSLPPF P+S+  PSSPSTHFTKPLFLAPPDIS  +++ S  K  I ++KKN
Sbjct: 1   MATSSLPTKSLPPFSPTSSFSPSSPSTHFTKPLFLAPPDISLSTSSSSSSKLLIPSSKKN 60

Query: 63  PWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR 122
            W DPFDDGDDP+MEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR
Sbjct: 61  QWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR 120

Query: 123 GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 182
           GDVRRCCCV+SGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY
Sbjct: 121 GDVRRCCCVMSGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 180

Query: 183 DPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAA 242
           DPDDYFPEPAEYTDMVGLLK RYYDMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAA
Sbjct: 181 DPDDYFPEPAEYTDMVGLLKGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNAA 240

Query: 243 GAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVE 302
           GAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV 
Sbjct: 241 GAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVA 300

Query: 303 EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPH 362
           EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ +RGFKPVFVIPH
Sbjct: 301 EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAVRGFKPVFVIPH 360

Query: 363 EKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFSS 422
           EKERENVEEEVGDDASIVFITTPGQLAALINDSAG+IATNTAA+QLAIAREKPSIALF S
Sbjct: 361 EKERENVEEEVGDDASIVFITTPGQLAALINDSAGVIATNTAAVQLAIAREKPSIALFCS 420

Query: 423 DEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 472
           +EKAKLFVPDAEAKRCITVSSATGRL DID+GTVK+AIQSFEVPLALAF
Sbjct: 421 EEKAKLFVPDAEAKRCITVSSATGRLTDIDLGTVKKAIQSFEVPLALAF 469

[Close]

BLAST of MS025748 vs. ExPASy Swiss-Prot
Match: Q9S9N6 (Photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSB1 PE=2 SV=1)

HSP 1 Score: 659.1 bits (1699), Expect = 3.8e-188
Identity = 340/466 (72.96%), Postives = 385/466 (82.62%), Query Frame = 0


Query: 6   SSLPTKSLP-PFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKNPW 65
           SSLP   LP P  P   +PP S S    KPL     +     T+ S   S     K NPW
Sbjct: 3   SSLPL--LPKPISPFFKTPPFSTS----KPLVFL--NFQTRLTSRSSDVSVNLKKKNNPW 62

Query: 66  FDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLRGD 125
            DPFD G+DPD EYGSLFADGKQ+EDPRPPDNP+NPYGFLKFP+GY VE+ASL LK+RGD
Sbjct: 63  LDPFDSGEDPDNEYGSLFADGKQDEDPRPPDNPDNPYGFLKFPKGYTVELASLPLKIRGD 122

Query: 126 VRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDP 185
           VRRCCCVISGGVYENLLFFP IQL+KDRYPGVQ+D++ + RGKQTYELNKNVRW+NVYDP
Sbjct: 123 VRRCCCVISGGVYENLLFFPTIQLIKDRYPGVQVDILTTERGKQTYELNKNVRWANVYDP 182

Query: 186 DDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGA 245
           DD++PEPAEYTDM+GLLK RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYP+VN+AGA
Sbjct: 183 DDHWPEPAEYTDMIGLLKGRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYIYPNVNSAGA 242

Query: 246 GLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVEEK 305
           GL LSETF  +++NLSE G++MY QM DWLGRPFRSVPR P+ PL+VSISRK+KEVV  K
Sbjct: 243 GLMLSETFTAENTNLSELGYSMYTQMEDWLGRPFRSVPRTPLLPLRVSISRKVKEVVAAK 302

Query: 306 YKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEK 365
           Y+ AGA  GK+IVIHGIESDSKASMQSKGD DSLL ++ WA+I   +RGFKPVFVIPHEK
Sbjct: 303 YRNAGAVTGKFIVIHGIESDSKASMQSKGDADSLLSLEKWAKIIKGVRGFKPVFVIPHEK 362

Query: 366 ERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFSSDE 425
           ERENVE+ VGDD SIVFITTPGQLAALINDSAG+IATNTAAIQLA AR+KP I LFSS+E
Sbjct: 363 ERENVEDFVGDDTSIVFITTPGQLAALINDSAGVIATNTAAIQLANARDKPCIGLFSSEE 422

Query: 426 KAKLFVPDAEAK-RCITVSSATGRLIDIDMGTVKRAIQSFEVPLAL 470
           K KLFVP AE K  C+ ++S TG+L DID+GTVK A+Q FE  LAL
Sbjct: 423 KGKLFVPYAEEKSNCVIIASKTGKLADIDIGTVKNAMQVFEGSLAL 460

[Close]

BLAST of MS025748 vs. ExPASy TrEMBL
Match: A0A6J1CV27 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014527 PE=4 SV=1)

HSP 1 Score: 927.9 bits (2397), Expect = 1.6e-266
Identity = 466/471 (98.94%), Postives = 468/471 (99.36%), Query Frame = 0


Query: 1   MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAK 60
           MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHI TAK
Sbjct: 1   MAMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPTAK 60

Query: 61  KNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLK 120
           KNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLK
Sbjct: 61  KNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLK 120

Query: 121 LRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSN 180
           LRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSN
Sbjct: 121 LRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSN 180

Query: 181 VYDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVN 240
           VYDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVN
Sbjct: 181 VYDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVN 240

Query: 241 AAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEV 300
           AAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKV ISRKLKEV
Sbjct: 241 AAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEV 300

Query: 301 VEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVI 360
           VEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVI
Sbjct: 301 VEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVI 360

Query: 361 PHEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALF 420
           PHEKERENVEEEVGDDA I+FITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALF
Sbjct: 361 PHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALF 420

Query: 421 SSDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 472
           SSDEKAKLFVPDAE+KRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Sbjct: 421 SSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 471

[Close]

BLAST of MS025748 vs. ExPASy TrEMBL
Match: A0A6J1GNJ2 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111456057 PE=4 SV=1)

HSP 1 Score: 870.5 bits (2248), Expect = 3.1e-249
Identity = 435/470 (92.55%), Postives = 453/470 (96.38%), Query Frame = 0


Query: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRT-AKK 62
           MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HI + AKK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 63  NPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 122
           NPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLKL
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 120

Query: 123 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 182
           RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 183 YDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNA 242
           YDPDDYFPEPA+YTDMVGLLK RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 243 AGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV 302
           AGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKE+V
Sbjct: 241 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 303 EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIP 362
           +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 363 HEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFS 422
           HEKERENVEEEVGD+ASIVFITTPGQLAALINDSAG+IATNTAAIQLAIAREKPSIALF 
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 423 SDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 472
           S+EKAKLFVPD+EAKRCI VSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Sbjct: 421 SEEKAKLFVPDSEAKRCIAVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 470

[Close]

BLAST of MS025748 vs. ExPASy TrEMBL
Match: A0A6J1JXN2 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111488799 PE=4 SV=1)

HSP 1 Score: 867.5 bits (2240), Expect = 2.6e-248
Identity = 434/470 (92.34%), Postives = 451/470 (95.96%), Query Frame = 0


Query: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRT-AKK 62
           MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HI + AKK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 63  NPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 122
           NPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 120

Query: 123 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 182
           RGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 183 YDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNA 242
           YDPDDYFPEPA+YTDMVGLLK RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 243 AGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV 302
           AGAGLFLS+TFKP+SSNLSEGGFNMYHQM DWLGRPFRSVPRHPVPPLKVSISRKLKE+V
Sbjct: 241 AGAGLFLSQTFKPESSNLSEGGFNMYHQMADWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 303 EEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIP 362
           +EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 363 HEKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFS 422
           HEKERENVEEEVGD+ASIVFITTPGQLAALINDSAG+IATNTAAIQLAIAREKPSIALF 
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 423 SDEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 472
           S+EKAKLFVPDAEAKRCI VSSATGRLIDIDMGTVKRAIQSFEVPLALAF
Sbjct: 421 SEEKAKLFVPDAEAKRCIAVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 470

[Close]

BLAST of MS025748 vs. ExPASy TrEMBL
Match: A0A5A7UYW0 (Photosynthetic NDH subunit of subcomplex B 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001650 PE=4 SV=1)

HSP 1 Score: 855.9 bits (2210), Expect = 7.9e-245
Identity = 430/469 (91.68%), Postives = 451/469 (96.16%), Query Frame = 0


Query: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKN 62
           MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKPLFL+P  IS LST+    K  I  +KKN
Sbjct: 1   MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPLFLSPLLIS-LSTS---SKLRIPCSKKN 60

Query: 63  PWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR 122
           PWFDPFDDG+DP+MEYGSLF+DGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR
Sbjct: 61  PWFDPFDDGEDPEMEYGSLFSDGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR 120

Query: 123 GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 182
           GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY
Sbjct: 121 GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 180

Query: 183 DPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAA 242
           DPDDYFPEPAEYTDMVG+LK RYYDMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAA
Sbjct: 181 DPDDYFPEPAEYTDMVGVLKGRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAA 240

Query: 243 GAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVE 302
           GAGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSI+RKLKEV+ 
Sbjct: 241 GAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIA 300

Query: 303 EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPH 362
           EKYKKAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIA+ IRGFKPVFVIPH
Sbjct: 301 EKYKKAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIANCIRGFKPVFVIPH 360

Query: 363 EKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFSS 422
           EKERENVEEEVG++ASIVFITTPGQLAALINDSAGLIATNTAA+QLAIAREKPSIALF S
Sbjct: 361 EKERENVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAVQLAIAREKPSIALFCS 420

Query: 423 DEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 472
           +EKAKLFVPDAEAKRCITVSS TGRLIDIDMGT+K+AIQSFEVPLALAF
Sbjct: 421 EEKAKLFVPDAEAKRCITVSSTTGRLIDIDMGTIKKAIQSFEVPLALAF 465

[Close]

BLAST of MS025748 vs. ExPASy TrEMBL
Match: A0A1S3CEK1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499839 PE=4 SV=1)

HSP 1 Score: 852.8 bits (2202), Expect = 6.7e-244
Identity = 429/469 (91.47%), Postives = 450/469 (95.95%), Query Frame = 0


Query: 3   MATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKN 62
           MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKPLFL+P  IS LST+    K  I  +KKN
Sbjct: 1   MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPLFLSPLLIS-LSTS---SKLRIPCSKKN 60

Query: 63  PWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR 122
           PWFDPFDDG+DP+MEYGSLF+DGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR
Sbjct: 61  PWFDPFDDGEDPEMEYGSLFSDGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLR 120

Query: 123 GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 182
           GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY
Sbjct: 121 GDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVY 180

Query: 183 DPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAA 242
           DPDDYFPEPAEYTDMVG+LK RYYDMVLSTKLAG+GHAVFLFMTTARDRVSYIYPDVNAA
Sbjct: 181 DPDDYFPEPAEYTDMVGVLKGRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNAA 240

Query: 243 GAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVE 302
           GAGLFLSETFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSI+RKLKEV+ 
Sbjct: 241 GAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVIA 300

Query: 303 EKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPH 362
           EKYKKAG EKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIA+ IRGFKPVFVIP 
Sbjct: 301 EKYKKAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIANCIRGFKPVFVIPR 360

Query: 363 EKERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFSS 422
           EKERENVEEEVG++ASIVFITTPGQLAALINDSAGLIATNTAA+QLAIAREKPSIALF S
Sbjct: 361 EKERENVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAVQLAIAREKPSIALFCS 420

Query: 423 DEKAKLFVPDAEAKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 472
           +EKAKLFVPDAEAKRCITVSS TGRLIDIDMGT+K+AIQSFEVPLALAF
Sbjct: 421 EEKAKLFVPDAEAKRCITVSSTTGRLIDIDMGTIKKAIQSFEVPLALAF 465

[Close]

BLAST of MS025748 vs. TAIR 10
Match: AT1G15980.1 (NDH-dependent cyclic electron flow 1 )

HSP 1 Score: 659.1 bits (1699), Expect = 2.7e-189
Identity = 340/466 (72.96%), Postives = 385/466 (82.62%), Query Frame = 0


Query: 6   SSLPTKSLP-PFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIRTAKKNPW 65
           SSLP   LP P  P   +PP S S    KPL     +     T+ S   S     K NPW
Sbjct: 3   SSLPL--LPKPISPFFKTPPFSTS----KPLVFL--NFQTRLTSRSSDVSVNLKKKNNPW 62

Query: 66  FDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKLRGD 125
            DPFD G+DPD EYGSLFADGKQ+EDPRPPDNP+NPYGFLKFP+GY VE+ASL LK+RGD
Sbjct: 63  LDPFDSGEDPDNEYGSLFADGKQDEDPRPPDNPDNPYGFLKFPKGYTVELASLPLKIRGD 122

Query: 126 VRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDP 185
           VRRCCCVISGGVYENLLFFP IQL+KDRYPGVQ+D++ + RGKQTYELNKNVRW+NVYDP
Sbjct: 123 VRRCCCVISGGVYENLLFFPTIQLIKDRYPGVQVDILTTERGKQTYELNKNVRWANVYDP 182

Query: 186 DDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVNAAGA 245
           DD++PEPAEYTDM+GLLK RYYDMVLSTKLAG+GHA FLFMTTARDRVSYIYP+VN+AGA
Sbjct: 183 DDHWPEPAEYTDMIGLLKGRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYIYPNVNSAGA 242

Query: 246 GLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVVEEK 305
           GL LSETF  +++NLSE G++MY QM DWLGRPFRSVPR P+ PL+VSISRK+KEVV  K
Sbjct: 243 GLMLSETFTAENTNLSELGYSMYTQMEDWLGRPFRSVPRTPLLPLRVSISRKVKEVVAAK 302

Query: 306 YKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVIPHEK 365
           Y+ AGA  GK+IVIHGIESDSKASMQSKGD DSLL ++ WA+I   +RGFKPVFVIPHEK
Sbjct: 303 YRNAGAVTGKFIVIHGIESDSKASMQSKGDADSLLSLEKWAKIIKGVRGFKPVFVIPHEK 362

Query: 366 ERENVEEEVGDDASIVFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALFSSDE 425
           ERENVE+ VGDD SIVFITTPGQLAALINDSAG+IATNTAAIQLA AR+KP I LFSS+E
Sbjct: 363 ERENVEDFVGDDTSIVFITTPGQLAALINDSAGVIATNTAAIQLANARDKPCIGLFSSEE 422

Query: 426 KAKLFVPDAEAK-RCITVSSATGRLIDIDMGTVKRAIQSFEVPLAL 470
           K KLFVP AE K  C+ ++S TG+L DID+GTVK A+Q FE  LAL
Sbjct: 423 KGKLFVPYAEEKSNCVIIASKTGKLADIDIGTVKNAMQVFEGSLAL 460

The following BLAST results are available for this feature:

BLAST of MS025748 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145001.1	3.4e-266	98.94	photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Momordica charantia...	[more]
XP_022953552.1	6.4e-249	92.55	photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita moschata]	[more]
KAG6575629.1	8.4e-249	92.55	Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita ...	[more]
XP_022992479.1	5.4e-248	92.34	photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita maxima]	[more]
XP_038896546.1	1.2e-247	92.54	photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Benincasa hispida]	[more]

BLAST of MS025748 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S9N6	3.8e-188	72.96	Photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Arabidopsis thali...	[more]

BLAST of MS025748 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CV27	1.6e-266	98.94	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Momordica charant...	[more]
A0A6J1GNJ2	3.1e-249	92.55	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita moschat...	[more]
A0A6J1JXN2	2.6e-248	92.34	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita maxima ...	[more]
A0A5A7UYW0	7.9e-245	91.68	Photosynthetic NDH subunit of subcomplex B 1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3CEK1	6.7e-244	91.47	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucumis melo OX=3...	[more]

BLAST of MS025748 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15980.1	2.7e-189	72.96	NDH-dependent cyclic electron flow 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.2000	Glycogen Phosphorylase B;	coord: 300..465 e-value: 4.5E-11 score: 44.7
None	No IPR available	GENE3D	3.40.50.2000	Glycogen Phosphorylase B;	coord: 139..273 e-value: 3.0E-9 score: 39.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	SUPERFAMILY	53756	UDP-Glycosyltransferase/glycogen phosphorylase	coord: 139..462
IPR044983	Photosynthetic NDH subunit of subcomplex B 1, chloroplastic	PANTHER	PTHR37698	PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 1, CHLOROPLASTIC	coord: 3..470

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS025748.1	MS025748.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)