![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS025647 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACTGTGAATCTGAAGTTGTTTCTAATGCTGCATTCTTGAAGGGAAAGCTTGTTGCAGGACAGGCATTGGTCAGTCCAACAATTGAAATGTACATTGCTGGAAGCTTTTCTGGAAACCCCGTCGTCATAACGAAAACTCTGCAACTCAGCTTTCGGAAGCACGGTCATAAACACAGGTTGGATGCAATACCAGAGTATGATACAACTGAACGGCAGAAAGACTCATATCCTGTATATGATTCACAAGTAAGCTTCTTGATAGCTTCTGATTCTACATTGAATCTTATTTCTTTCTGCTTTTCAACTGAAATAATTCAACAAGGAAGTTTCACTAGCCCCTTGTTACATCAAAAAATCTTTTCACTCGCATGTAATGTTTCCTGCACTGTAACCTACTTTTTTAAGATCCAAACAGTTCCATTTTGTTGCATAGAACTTAAAATCTTATCCAAAAAGTTCCATGTTGTTGCATAGAACTTAGAATCTTATCCAAAAAGCTCTCATTGTATAGAACTTAGAATCTTATCCAAGGCATATGAATCGATGAAAGAAGTATCAATAGGGACTGGGGAGCAACGTGCTAGCTGGGATGGTCCTCATTCTAATCACCATTACCTTGCTCTTTTGTTCTGCGACCCATTATTTTAAGTTTTCTTTGATGATCTATCAGAACCGGGTCATCTGACAAACATGGCCTCTCCCTCTCCTAAGACATGTTGAGAATTGTAAAATGGGGCCCCCGCCACTATTCCTGAAGTTTCCTTGGGAACCCTCCTCTTGATACTTCATCCATTCTTCTGTGTCGTTTCTCAAAAAGTAGCATATATTTGAAACATGACCAATTTTAGTGTACAAATCTATCTAATGATTGGATTGCTCTCTGCCATGGTTTCCACAATTCTTTGATAGTAATAATGGCTTCCTTCATGGTGTCGATTTTTCTTGCTGATGGGATGCTCAAGCCAGTTCTGTATAACATCTGTCTACTCAATCATTGTGCAGGTTTCAGAGTAAAGAAGTTACAGACAAGACAATGAAGATGACTACAGTAACGTGTACTGCGGAACAGACTACATGGAAAGAGAATATGGTGAACTATCCTGGTTAA ATGCACTGTGAATCTGAAGTTGTTTCTAATGCTGCATTCTTGAAGGGAAAGCTTGTTGCAGGACAGGCATTGGTCAGTCCAACAATTGAAATGTACATTGCTGGAAGCTTTTCTGGAAACCCCGTCGTCATAACGAAAACTCTGCAACTCAGCTTTCGGAAGCACGGTCATAAACACAGGTTTCAGAGTAAAGAAGTTACAGACAAGACAATGAAGATGACTACAGTAACGTGTACTGCGGAACAGACTACATGGAAAGAGAATATGGTGAACTATCCTGGTTAA ATGCACTGTGAATCTGAAGTTGTTTCTAATGCTGCATTCTTGAAGGGAAAGCTTGTTGCAGGACAGGCATTGGTCAGTCCAACAATTGAAATGTACATTGCTGGAAGCTTTTCTGGAAACCCCGTCGTCATAACGAAAACTCTGCAACTCAGCTTTCGGAAGCACGGTCATAAACACAGGTTTCAGAGTAAAGAAGTTACAGACAAGACAATGAAGATGACTACAGTAACGTGTACTGCGGAACAGACTACATGGAAAGAGAATATGGTGAACTATCCTGGTTAA MHCESEVVSNAAFLKGKLVAGQALVSPTIEMYIAGSFSGNPVVITKTLQLSFRKHGHKHRFQSKEVTDKTMKMTTVTCTAEQTTWKENMVNYPG Homology
BLAST of MS025647 vs. NCBI nr
Match: KAG7037857.1 (hypothetical protein SDJN02_01488, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 95.9 bits (237), Expect = 2.0e-16 Identity = 47/59 (79.66%), Postives = 54/59 (91.53%), Query Frame = 0
BLAST of MS025647 vs. NCBI nr
Match: XP_022940521.1 (uncharacterized protein At1g01500-like [Cucurbita moschata]) HSP 1 Score: 95.9 bits (237), Expect = 2.0e-16 Identity = 47/59 (79.66%), Postives = 54/59 (91.53%), Query Frame = 0
BLAST of MS025647 vs. NCBI nr
Match: KAG6608533.1 (hypothetical protein SDJN03_01875, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 95.9 bits (237), Expect = 2.0e-16 Identity = 47/59 (79.66%), Postives = 54/59 (91.53%), Query Frame = 0
BLAST of MS025647 vs. NCBI nr
Match: XP_023525038.1 (uncharacterized protein At1g01500-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 94.4 bits (233), Expect = 5.7e-16 Identity = 46/59 (77.97%), Postives = 53/59 (89.83%), Query Frame = 0
BLAST of MS025647 vs. NCBI nr
Match: XP_004147785.1 (uncharacterized protein At1g01500 [Cucumis sativus] >KGN59953.1 hypothetical protein Csa_001764 [Cucumis sativus]) HSP 1 Score: 93.6 bits (231), Expect = 9.8e-16 Identity = 47/71 (66.20%), Postives = 56/71 (78.87%), Query Frame = 0
BLAST of MS025647 vs. ExPASy TrEMBL
Match: A0A6J1FIQ0 (uncharacterized protein At1g01500-like OS=Cucurbita moschata OX=3662 GN=LOC111446093 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 9.6e-17 Identity = 47/59 (79.66%), Postives = 54/59 (91.53%), Query Frame = 0
BLAST of MS025647 vs. ExPASy TrEMBL
Match: A0A0A0LDV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G855960 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 4.7e-16 Identity = 47/71 (66.20%), Postives = 56/71 (78.87%), Query Frame = 0
BLAST of MS025647 vs. ExPASy TrEMBL
Match: A0A5D3D7W5 (Erythronate-4-phosphate dehydrogenase family protein isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00210 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 3.1e-15 Identity = 46/71 (64.79%), Postives = 56/71 (78.87%), Query Frame = 0
BLAST of MS025647 vs. ExPASy TrEMBL
Match: A0A1S3CRR3 (uncharacterized protein At1g01500-like OS=Cucumis melo OX=3656 GN=LOC103503952 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 3.1e-15 Identity = 46/71 (64.79%), Postives = 56/71 (78.87%), Query Frame = 0
BLAST of MS025647 vs. ExPASy TrEMBL
Match: A0A6J1J0K8 (uncharacterized protein At1g01500-like OS=Cucurbita maxima OX=3661 GN=LOC111480824 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 5.3e-15 Identity = 45/59 (76.27%), Postives = 52/59 (88.14%), Query Frame = 0
BLAST of MS025647 vs. TAIR 10
Match: AT1G75180.1 (Erythronate-4-phosphate dehydrogenase family protein ) HSP 1 Score: 66.6 bits (161), Expect = 1.2e-11 Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0
BLAST of MS025647 vs. TAIR 10
Match: AT1G75180.2 (Erythronate-4-phosphate dehydrogenase family protein ) HSP 1 Score: 66.6 bits (161), Expect = 1.2e-11 Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0
BLAST of MS025647 vs. TAIR 10
Match: AT1G75180.3 (Erythronate-4-phosphate dehydrogenase family protein ) HSP 1 Score: 66.6 bits (161), Expect = 1.2e-11 Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0
BLAST of MS025647 vs. TAIR 10
Match: AT1G19400.1 (Erythronate-4-phosphate dehydrogenase family protein ) HSP 1 Score: 62.8 bits (151), Expect = 1.7e-10 Identity = 36/96 (37.50%), Postives = 53/96 (55.21%), Query Frame = 0
BLAST of MS025647 vs. TAIR 10
Match: AT1G19400.2 (Erythronate-4-phosphate dehydrogenase family protein ) HSP 1 Score: 62.8 bits (151), Expect = 1.7e-10 Identity = 36/96 (37.50%), Postives = 53/96 (55.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|