Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGCTGCGCTAAAGCGAAAGAAAACAACTTGTAGTGGAGGCATGATCATGATTGTGCTTCCCCCTGTGTCAAAAGGAGGCCAAAAAACACCTCATTTCAGACTTTCCCCACTCTGTTTAAGTGCACAGCAAACTGTAATCATTATGATAAAAACTCCACATTACTTTTTGTGGGAAATCCCATTTCCAGCATGCCATCTGTTTGATCAAATGCCTGACTACTGCTCTGACCATATTCATCCACAGGGCTCCGACTCTGGTCATGGTTTCAGCGGATCGGACCAGCGAAGAGCGGCGTTACCTTGTTGATTGCACTCCTGGCGGCGTCGGCGGCGCGGAGCAGGTGCACCGCCGTAGTGTGCTCTTGCTATGCACCCTCCGGTAGCTTCAACAACAAAGGCGAAGGAAGCAAGACGAGCACTTTTTACAAGACGCGTTCTTTTGCAGAAAAGAGAGATGGGGTCGGGCAAAACTTCCGTAATCATGAACTACAAGATGGGAGTGGAAATGGGTCTAATGGGGTTCGTGTTGAATTCCCAAATCTCAAGAGCAATCTGAAGAAGAAGACAAACGAGGAGGAGGAGGAGGAGAAAATTTTCGCTACAGAAACAAGGAAAGTGAACTGGCCAGATGCCCATGGCAAAGATATTGCTCATATCCAAGAGTTTGAACCGAGGTATGGGTTTGTTTATGTCTGGATGATTGATTTGTCATAA
mRNA sequence
ATGAGTGCTGCGCTAAAGCGAAAGAAAACAACTTGTAGTGGAGGCATGATCATGATTGTGCTTCCCCCTGTGTCAAAAGGAGGCCAAAAAACACCTCATTTCAGACTTTCCCCACTCTGGCTCCGACTCTGGTCATGGTTTCAGCGGATCGGACCAGCGAAGAGCGGCGTTACCTTGTTGATTGCACTCCTGGCGGCGTCGGCGGCGCGGAGCAGGTGCACCGCCGTAGTGTGCTCTTGCTATGCACCCTCCGGTAGCTTCAACAACAAAGGCGAAGGAAGCAAGACGAGCACTTTTTACAAGACGCGTTCTTTTGCAGAAAAGAGAGATGGGGTCGGGCAAAACTTCCGTAATCATGAACTACAAGATGGGAGTGGAAATGGGTCTAATGGGGTTCGTGTTGAATTCCCAAATCTCAAGAGCAATCTGAAGAAGAAGACAAACGAGGAGGAGGAGGAGGAGAAAATTTTCGCTACAGAAACAAGGAAAGTGAACTGGCCAGATGCCCATGGCAAAGATATTGCTCATATCCAAGAGTTTGAACCGAGGTATGGGTTTGTTTATGTCTGGATGATTGATTTGTCATAA
Coding sequence (CDS)
ATGAGTGCTGCGCTAAAGCGAAAGAAAACAACTTGTAGTGGAGGCATGATCATGATTGTGCTTCCCCCTGTGTCAAAAGGAGGCCAAAAAACACCTCATTTCAGACTTTCCCCACTCTGGCTCCGACTCTGGTCATGGTTTCAGCGGATCGGACCAGCGAAGAGCGGCGTTACCTTGTTGATTGCACTCCTGGCGGCGTCGGCGGCGCGGAGCAGGTGCACCGCCGTAGTGTGCTCTTGCTATGCACCCTCCGGTAGCTTCAACAACAAAGGCGAAGGAAGCAAGACGAGCACTTTTTACAAGACGCGTTCTTTTGCAGAAAAGAGAGATGGGGTCGGGCAAAACTTCCGTAATCATGAACTACAAGATGGGAGTGGAAATGGGTCTAATGGGGTTCGTGTTGAATTCCCAAATCTCAAGAGCAATCTGAAGAAGAAGACAAACGAGGAGGAGGAGGAGGAGAAAATTTTCGCTACAGAAACAAGGAAAGTGAACTGGCCAGATGCCCATGGCAAAGATATTGCTCATATCCAAGAGTTTGAACCGAGGTATGGGTTTGTTTATGTCTGGATGATTGATTTGTCATAA
Protein sequence
MSAALKRKKTTCSGGMIMIVLPPVSKGGQKTPHFRLSPLWLRLWSWFQRIGPAKSGVTLLIALLAASAARSRCTAVVCSCYAPSGSFNNKGEGSKTSTFYKTRSFAEKRDGVGQNFRNHELQDGSGNGSNGVRVEFPNLKSNLKKKTNEEEEEEKIFATETRKVNWPDAHGKDIAHIQEFEPRYGFVYVWMIDLS
Homology
BLAST of MS025491 vs. NCBI nr
Match:
KAG7026120.1 (hypothetical protein SDJN02_12619 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 226.1 bits (575), Expect = 2.6e-55
Identity = 115/150 (76.67%), Postives = 130/150 (86.67%), Query Frame = 0
Query: 34 FRLSPLWLRLWSWFQRIGPAKSGVTLLIALLAASAARSRCTAVVCSCYAPSGSFNNKGEG 93
F+ + WL++WSWFQRI P K GV+LLI LL ASAARSRCTAVVCSCYAPSGSFNNKGEG
Sbjct: 852 FKCTANWLQVWSWFQRIEPVKRGVSLLIVLL-ASAARSRCTAVVCSCYAPSGSFNNKGEG 911
Query: 94 SKTSTFYKTRSFAEKRDGVGQNFR-NHELQDGSGNGSNGVRVEFPNLKSNLKKKTNEEEE 153
SKTST +++RS EKRDGV Q +R NHELQDG+GNGSNG+ +E PNLKSNLKKKT E+EE
Sbjct: 912 SKTSTIFRSRSVEEKRDGVKQKWRNNHELQDGNGNGSNGIHLEIPNLKSNLKKKTKEKEE 971
Query: 154 EEKIFATETRKVNWPDAHGKDIAHIQEFEP 183
EE+ TETRKVNWPDAHGKDIAHIQEF+P
Sbjct: 972 EEETCPTETRKVNWPDAHGKDIAHIQEFDP 1000
BLAST of MS025491 vs. NCBI nr
Match:
KAG6593791.1 (hypothetical protein SDJN03_13267, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 221.9 bits (564), Expect = 5.0e-54
Identity = 120/169 (71.01%), Postives = 135/169 (79.88%), Query Frame = 0
Query: 15 GMIMIVLPPVSKGGQKTPHFRLSPLWLRLWSWFQRIGPAKSGVTLLIALLAASAARSRCT 74
G+ VLP V RL + L++WSWFQRI P K GV+LLI LL ASAARSRCT
Sbjct: 821 GISTTVLPEVLSRLSSRVFARL--IRLQVWSWFQRIEPVKRGVSLLIVLL-ASAARSRCT 880
Query: 75 AVVCSCYAPSGSFNNKGEGSKTSTFYKTRSFAEKRDGVGQNFR-NHELQDGSGNGSNGVR 134
AVVCSCYAPSGSFNNKGEGSKTST +++RS EKRDGV Q +R NHELQDG+GNGSNG+
Sbjct: 881 AVVCSCYAPSGSFNNKGEGSKTSTIFRSRSVEEKRDGVKQKWRNNHELQDGNGNGSNGIH 940
Query: 135 VEFPNLKSNLKKKTNEEEEEEKIFATETRKVNWPDAHGKDIAHIQEFEP 183
+E PNLKSNLKKKT E+EEEE+ TETRKVNWPDAHGKDIAHIQEF+P
Sbjct: 941 LEIPNLKSNLKKKTKEKEEEEETCPTETRKVNWPDAHGKDIAHIQEFDP 986
BLAST of MS025491 vs. NCBI nr
Match:
KAF3972265.1 (hypothetical protein CMV_004221 [Castanea mollissima])
HSP 1 Score: 110.9 bits (276), Expect = 1.2e-20
Identity = 66/132 (50.00%), Postives = 90/132 (68.18%), Query Frame = 0
Query: 60 LIALLAASAARSRCTAVVCSCYAPSGSFNNKGEGSKTST---FYKTRSFAEKRDGVGQNF 119
++++L A++A++RC+A+VCSCY PS S +NK E S S+ K +S AEKRDGV +
Sbjct: 1 MLSVLLAASAQNRCSALVCSCYVPSRSLDNKVEESNRSSNNNNTKKQSRAEKRDGVMEEL 60
Query: 120 RNHELQDGSG------NGSNGVRVEFPNLKSNLKKKTNEEEEEEKIFATETRKVNWPDAH 179
NHEL+ +G +GSNG +E P LKSNLKK T + + ++ E RKV+WPDAH
Sbjct: 61 HNHELRLQNGGNYSRSSGSNGPHIEHPTLKSNLKKTTIVDGNQPRL---EKRKVSWPDAH 120
Query: 180 GKDIAHIQEFEP 183
GKDIAH+ EFEP
Sbjct: 121 GKDIAHVHEFEP 129
BLAST of MS025491 vs. NCBI nr
Match:
XP_024931762.1 (uncharacterized protein LOC112492388 [Ziziphus jujuba])
HSP 1 Score: 110.5 bits (275), Expect = 1.6e-20
Identity = 84/207 (40.58%), Postives = 109/207 (52.66%), Query Frame = 0
Query: 1 MSA-ALKRKKTTCSGGMIMIVLPPVSKGGQKTPHFRLSPLWLRLWSWFQRI--GPAKSGV 60
MSA A K+K+ T SGG + I+ L+LWSW I + +
Sbjct: 1 MSAKAKKQKEATFSGGGMKII--------------------LQLWSWCFSIHRNRKERRI 60
Query: 61 TLLIALLAASAARSRCTAVVCSCYAPSGSFNNKGE----------GSKTSTFYKTRSFAE 120
TL LLAAS A+++CT +V SCY PS ++NKGE S + K +S AE
Sbjct: 61 TLSFVLLAAS-AQNKCTTLVWSCYVPSKGYHNKGEENSKNDDNNDNSNSIISDKKQSVAE 120
Query: 121 KRDGVGQNFRNHEL------------QDGSGNGSNGVRVEFPNLKSNLKKKTNEEEEEEK 180
K+DGV + N+E ++ +GSNG +E NLKSNLKK EE +
Sbjct: 121 KKDGVKEEVDNNEARGCDSSSSNNGGRNSRSSGSNGPHIEHSNLKSNLKKAVVEENNQ-- 180
Query: 181 IFATETRKVNWPDAHGKDIAHIQEFEP 183
TE RKV+WPDAHGKDIAH+QEFEP
Sbjct: 181 -LRTERRKVSWPDAHGKDIAHVQEFEP 183
BLAST of MS025491 vs. NCBI nr
Match:
KAG6731304.1 (hypothetical protein I3842_01G123200, partial [Carya illinoinensis])
HSP 1 Score: 109.0 bits (271), Expect = 4.7e-20
Identity = 73/141 (51.77%), Postives = 93/141 (65.96%), Query Frame = 0
Query: 56 GVTLLIALLAASAARSRCTAVVCSCYAPSGSFNNKGEG---SKTSTFYKTRSFAEKRDGV 115
G L LLAAS A++RCTA+VCSCY PS S +N+GE S S K +S AEK+DGV
Sbjct: 5 GRAFLFVLLAAS-AQNRCTALVCSCYVPSRSLDNRGEESNISSNSNNNKKQSPAEKKDGV 64
Query: 116 GQNFRNHELQ-----DGSG----NGSNGVRVEFPNLKSNLKKKT--NEEEEEEKIFATET 175
+ N+ELQ +GS +G+NG ++E P LKSNLKK T + +++I E
Sbjct: 65 MEKLHNYELQLQNKSNGSSYCRRSGTNGPQIERPTLKSNLKKGTTVGVGDNQQRI---EK 124
Query: 176 RKVNWPDAHGKDIAHIQEFEP 183
RKV+WPDAHGKDIAH+QEFEP
Sbjct: 125 RKVSWPDAHGKDIAHVQEFEP 141
BLAST of MS025491 vs. ExPASy TrEMBL
Match:
A0A2N9F5A9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS9921 PE=4 SV=1)
HSP 1 Score: 118.2 bits (295), Expect = 3.7e-23
Identity = 69/138 (50.00%), Postives = 92/138 (66.67%), Query Frame = 0
Query: 59 LLIALLAASAARSRCTAVVCSCYAPSGSFNNKGEGSK---TSTFYKTRSFAEKRDGVGQN 118
L++++L A++A++RC+A+VCSCY PS + +NKGE S S K +S AEKRDGV +
Sbjct: 15 LVVSVLLAASAQNRCSALVCSCYVPSRNLDNKGEESNRSINSNNTKKQSSAEKRDGVMEE 74
Query: 119 FRNHELQ----------DGSGNGSNGVRVEFPNLKSNLKKKTNEEEEEEKIFATETRKVN 178
NHELQ G+GSNG +E P LKSNLKK T ++ + ++ E RKV+
Sbjct: 75 LHNHELQLQNKSNGGNHYSRGSGSNGPHIEHPTLKSNLKKTTLVDDNQLRL---EKRKVS 134
Query: 179 WPDAHGKDIAHIQEFEPR 184
WPDAHGKDIAH+ EFEPR
Sbjct: 135 WPDAHGKDIAHVHEFEPR 149
BLAST of MS025491 vs. ExPASy TrEMBL
Match:
A0A6P6GC85 (uncharacterized protein LOC112492388 OS=Ziziphus jujuba OX=326968 GN=LOC112492388 PE=4 SV=1)
HSP 1 Score: 110.5 bits (275), Expect = 7.8e-21
Identity = 84/207 (40.58%), Postives = 109/207 (52.66%), Query Frame = 0
Query: 1 MSA-ALKRKKTTCSGGMIMIVLPPVSKGGQKTPHFRLSPLWLRLWSWFQRI--GPAKSGV 60
MSA A K+K+ T SGG + I+ L+LWSW I + +
Sbjct: 1 MSAKAKKQKEATFSGGGMKII--------------------LQLWSWCFSIHRNRKERRI 60
Query: 61 TLLIALLAASAARSRCTAVVCSCYAPSGSFNNKGE----------GSKTSTFYKTRSFAE 120
TL LLAAS A+++CT +V SCY PS ++NKGE S + K +S AE
Sbjct: 61 TLSFVLLAAS-AQNKCTTLVWSCYVPSKGYHNKGEENSKNDDNNDNSNSIISDKKQSVAE 120
Query: 121 KRDGVGQNFRNHEL------------QDGSGNGSNGVRVEFPNLKSNLKKKTNEEEEEEK 180
K+DGV + N+E ++ +GSNG +E NLKSNLKK EE +
Sbjct: 121 KKDGVKEEVDNNEARGCDSSSSNNGGRNSRSSGSNGPHIEHSNLKSNLKKAVVEENNQ-- 180
Query: 181 IFATETRKVNWPDAHGKDIAHIQEFEP 183
TE RKV+WPDAHGKDIAH+QEFEP
Sbjct: 181 -LRTERRKVSWPDAHGKDIAHVQEFEP 183
BLAST of MS025491 vs. ExPASy TrEMBL
Match:
A0A7J9E5R1 (Uncharacterized protein (Fragment) OS=Gossypium trilobum OX=34281 GN=Gotri_017094 PE=4 SV=1)
HSP 1 Score: 98.6 bits (244), Expect = 3.1e-17
Identity = 70/144 (48.61%), Postives = 93/144 (64.58%), Query Frame = 0
Query: 61 IALLAASAARSRCTAVVCSCYAPSGSFNNKGE-----GSKTSTFYKTRSFAEK--RDGV- 120
+ALLAAS A++RCTA+VCSCY PS + ++K E S +S+ K R+ EK +DGV
Sbjct: 1 LALLAAS-AQNRCTALVCSCYVPSRNSSSKEEEIISNRSSSSSNIKKRTSLEKNIKDGVM 60
Query: 121 ----GQNFRNHELQ-----DGSGNGSNGVRVE-FPNLKSNLKKKT----NEEEEEEKIFA 180
G N N ELQ +G+G+NG +E P LKSNLKK T ++ + E ++
Sbjct: 61 EEAAGNNNNNDELQLSVDKISNGSGTNGSHIEPNPTLKSNLKKTTTAAADDNDGEGELMK 120
Query: 181 TETRKVNWPDAHGKDIAHIQEFEP 183
TE RKV+WPDAHGKDIAH++EFEP
Sbjct: 121 TERRKVSWPDAHGKDIAHVREFEP 143
BLAST of MS025491 vs. ExPASy TrEMBL
Match:
A0A7J8RS91 (Uncharacterized protein (Fragment) OS=Gossypium davidsonii OX=34287 GN=Godav_016268 PE=4 SV=1)
HSP 1 Score: 98.6 bits (244), Expect = 3.1e-17
Identity = 70/144 (48.61%), Postives = 93/144 (64.58%), Query Frame = 0
Query: 61 IALLAASAARSRCTAVVCSCYAPSGSFNNKGE-----GSKTSTFYKTRSFAEK--RDGV- 120
+ALLAAS A++RCTA+VCSCY PS + ++K E S +S+ K R+ EK +DGV
Sbjct: 15 LALLAAS-AQNRCTALVCSCYVPSRNSSSKEEEIISNRSSSSSNIKKRTSLEKNIKDGVM 74
Query: 121 ----GQNFRNHELQ-----DGSGNGSNGVRVE-FPNLKSNLKKKT----NEEEEEEKIFA 180
G N N ELQ +G+G+NG +E P LKSNLKK T ++ + E ++
Sbjct: 75 EEAAGNNNNNDELQLSIDKISNGSGTNGSHIEPNPTLKSNLKKTTTAAADDNDGEGELMK 134
Query: 181 TETRKVNWPDAHGKDIAHIQEFEP 183
TE RKV+WPDAHGKDIAH++EFEP
Sbjct: 135 TERRKVSWPDAHGKDIAHVREFEP 157
BLAST of MS025491 vs. ExPASy TrEMBL
Match:
A0A7J8M2J2 (Uncharacterized protein (Fragment) OS=Gossypium lobatum OX=34289 GN=Golob_015857 PE=4 SV=1)
HSP 1 Score: 98.6 bits (244), Expect = 3.1e-17
Identity = 70/144 (48.61%), Postives = 93/144 (64.58%), Query Frame = 0
Query: 61 IALLAASAARSRCTAVVCSCYAPSGSFNNKGE-----GSKTSTFYKTRSFAEK--RDGV- 120
+ALLAAS A++RCTA+VCSCY PS + ++K E S +S+ K R+ EK +DGV
Sbjct: 1 LALLAAS-AQNRCTALVCSCYVPSRNSSSKEEEIISNRSSSSSNIKKRTSLEKNIKDGVM 60
Query: 121 ----GQNFRNHELQ-----DGSGNGSNGVRVE-FPNLKSNLKKKT----NEEEEEEKIFA 180
G N N ELQ +G+G+NG +E P LKSNLKK T ++ + E ++
Sbjct: 61 EEAAGNNNNNDELQLSIDKISNGSGTNGSHIEPNPTLKSNLKKTTTAAADDNDGEGELMK 120
Query: 181 TETRKVNWPDAHGKDIAHIQEFEP 183
TE RKV+WPDAHGKDIAH++EFEP
Sbjct: 121 TERRKVSWPDAHGKDIAHVREFEP 143
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7026120.1 | 2.6e-55 | 76.67 | hypothetical protein SDJN02_12619 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
KAG6593791.1 | 5.0e-54 | 71.01 | hypothetical protein SDJN03_13267, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAF3972265.1 | 1.2e-20 | 50.00 | hypothetical protein CMV_004221 [Castanea mollissima] | [more] |
XP_024931762.1 | 1.6e-20 | 40.58 | uncharacterized protein LOC112492388 [Ziziphus jujuba] | [more] |
KAG6731304.1 | 4.7e-20 | 51.77 | hypothetical protein I3842_01G123200, partial [Carya illinoinensis] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2N9F5A9 | 3.7e-23 | 50.00 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS9921 PE=4 SV=1 | [more] |
A0A6P6GC85 | 7.8e-21 | 40.58 | uncharacterized protein LOC112492388 OS=Ziziphus jujuba OX=326968 GN=LOC11249238... | [more] |
A0A7J9E5R1 | 3.1e-17 | 48.61 | Uncharacterized protein (Fragment) OS=Gossypium trilobum OX=34281 GN=Gotri_01709... | [more] |
A0A7J8RS91 | 3.1e-17 | 48.61 | Uncharacterized protein (Fragment) OS=Gossypium davidsonii OX=34287 GN=Godav_016... | [more] |
A0A7J8M2J2 | 3.1e-17 | 48.61 | Uncharacterized protein (Fragment) OS=Gossypium lobatum OX=34289 GN=Golob_015857... | [more] |
Match Name | E-value | Identity | Description | |