
MS025000 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCGGTCTCTGGAGCCACTGGTGGTTGGCAGAGTGATCGGAGATGTGCTGGACATGTTCACTCCGGCGGCCGACCTCTCCGTCAGTTATGGCTCTAAACAGGTCGCTAACGGCTGCGAAATCAAGCCCTCCGCCGCTTCCGATGCTCCCACTCTTCTTATTCACAGCCCCCTCTCCAACCACCTTTACACTTTGGTATTTTTGCACTTTTAATTTCAACTCTCCTTTTTCTTTTTTCTTTTGAATGATTCTGAAACTGGAATTTTGGGTAGGTTATGGTTGATCCTGATGCTCCGAGTCCTAGTGAGCCAACATTCAGAGAGTGGCTTCACTGGTAATTATTAAACTTTTAACTTTCTGTTTCCCTTAATTCTGTTTGAATTGTATGCTGGGAAATTTTTTGATTGCTCAGGATTGTGGTGGACATTCCAGAAGGGTCTGATGCCTACAAAGGTATGCTTTAATTTTCTCAATTCGCAAATCAAATTCAAGATGATTAAAAACAAAAAGAATTAGTTCGTGGGGAGATATAATTTATTTTGTAATGCTATGACAAAGTATAGTGGGAATAATTAAAATTCCGAATGCGAGAAAAGAATCTCTATCAATGTTTTGTTTAGTACCCAAATAATTAATTTAGGTCTTACACGTAGGGGGCTTTGTGGATAGACTCGATTGGGGTTGGATTAAGACGGTCCTGATTTAGCTGAGGCTGTATTTGATTAAAAATTTAGTCCTAATTGCTAAATTTCAATTGTAAATTTTACTCCTATCTAAGTATTAATTAACTCAACATCTAAGTATTATCGAACGAAGTATAATTCTTCACGTTGTACATGGGCGTGAAGTCTATTTGGGCACAAACTTGGAAAACTTGGGCGTTTTCGTTGTTGTTATTATTATTTAAATATATATTTTTTAATAGTGGGTTTCATATCTAGCCATTTGGCTTGAAAGGATAGCAAATCTAATATAAACTATTAAAATTGGTAAACATGACACAAATTTTTTTCCACACGTCTATTTAGACGTTTATTAGTCTATCAATAATTGACCCTCGTAGAGGTCTATGAGTAATATTAGTTTTTGAAGTACCACAAATTGACGTAGGGAATTCAACTTTTAATCTCAAGAGGAGTAGTTCTCTACCTTTAACATCAGCTATTAATATTTCTCTACCTATCCTGGATTGATCTAGTAAGTCTAAAAGGTTCGAGGTAAATTTTAAAGAATTTAAGGGGTGGTCTAGTAGTCTAAAGGGGCCAGGTAAATTTCCGAATTTAGGAGTTAAAAGGTAAATTTTAAAGAATTTATGGCGAATTCAAACCTTGGCTGCTTCGTACTTATATTTAATATAACTTATTGACAACCAAATTTTAGAGGATGAAGTGGTTAGTCTTTCCCTAAAGGTCTAACCTACAAAATTGTTATGTAATTGCAAATATAACTTCATTTTTGCCACCCATTAAATTCATCTTTTATAATCTTCTTTCTGAATGGCCGAGATTTACAAAACAATCCTAACAAAAAATGTTCTTTTTTAACTAAATTTTCCCTCTTAGGCTATTCATGTCTAAGAGATTTCTAAAGCTTTCTTTTGAAAATAGCTTTAAAAAAATGTAAAGAATTTGGTTTATTTCTAACCATCATGGAGCCTTTCTTATTTTTTTGGTTTTTATAGGTGGTGGGTCTTTTAACACCCCTAACTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAGAAAAGGAAGTTGAGGGTATCCGTAATTACAAAAGCAGCAACATAATGGAAGAGGTATAAATTATTTTTTCAAATTTAAAATGAATGAGAAATAATTTTTATAAAAAAAAAGAGAGAGAGAGAAAATTGCTGCTTTTGATGGTGGAATGAAATTAAAGGTAGTGGTTGGTGATGGTGTAATTTCAGGGAAGGAGGTGGTGCAGTACATGGGACCGCAGCCTCCAACAGGAATTCACCGGTACGTGTTAGCGGCGTTCAAGCAGAACACGGCCATCGGCGGCAGGGTCCGACCGCCACTCAGCCGGAGCAATTTCAGCACCCGCCAATTTGCTTCTCAGAACGCCCTCGGCCTTCCTGTCGCCGCCGTGTACTTCAACTCCCAGAAGCAGCCCGCAGCCAAGAAACGCTGA ATGGTGCGGTCTCTGGAGCCACTGGTGGTTGGCAGAGTGATCGGAGATGTGCTGGACATGTTCACTCCGGCGGCCGACCTCTCCGTCAGTTATGGCTCTAAACAGGTCGCTAACGGCTGCGAAATCAAGCCCTCCGCCGCTTCCGATGCTCCCACTCTTCTTATTCACAGCCCCCTCTCCAACCACCTTTACACTTTGGTTATGGTTGATCCTGATGCTCCGAGTCCTAGTGAGCCAACATTCAGAGAGTGGCTTCACTGGATTGTGGTGGACATTCCAGAAGGGTCTGATGCCTACAAAGGGAAGGAGGTGGTGCAGTACATGGGACCGCAGCCTCCAACAGGAATTCACCGGTACGTGTTAGCGGCGTTCAAGCAGAACACGGCCATCGGCGGCAGGGTCCGACCGCCACTCAGCCGGAGCAATTTCAGCACCCGCCAATTTGCTTCTCAGAACGCCCTCGGCCTTCCTGTCGCCGCCGTGTACTTCAACTCCCAGAAGCAGCCCGCAGCCAAGAAACGCTGA ATGGTGCGGTCTCTGGAGCCACTGGTGGTTGGCAGAGTGATCGGAGATGTGCTGGACATGTTCACTCCGGCGGCCGACCTCTCCGTCAGTTATGGCTCTAAACAGGTCGCTAACGGCTGCGAAATCAAGCCCTCCGCCGCTTCCGATGCTCCCACTCTTCTTATTCACAGCCCCCTCTCCAACCACCTTTACACTTTGGTTATGGTTGATCCTGATGCTCCGAGTCCTAGTGAGCCAACATTCAGAGAGTGGCTTCACTGGATTGTGGTGGACATTCCAGAAGGGTCTGATGCCTACAAAGGGAAGGAGGTGGTGCAGTACATGGGACCGCAGCCTCCAACAGGAATTCACCGGTACGTGTTAGCGGCGTTCAAGCAGAACACGGCCATCGGCGGCAGGGTCCGACCGCCACTCAGCCGGAGCAATTTCAGCACCCGCCAATTTGCTTCTCAGAACGCCCTCGGCCTTCCTGTCGCCGCCGTGTACTTCAACTCCCAGAAGCAGCCCGCAGCCAAGAAACGCTGA MVRSLEPLVVGRVIGDVLDMFTPAADLSVSYGSKQVANGCEIKPSAASDAPTLLIHSPLSNHLYTLVMVDPDAPSPSEPTFREWLHWIVVDIPEGSDAYKGKEVVQYMGPQPPTGIHRYVLAAFKQNTAIGGRVRPPLSRSNFSTRQFASQNALGLPVAAVYFNSQKQPAAKKR Homology
BLAST of MS025000 vs. NCBI nr
Match: XP_038893803.1 (protein MOTHER of FT and TFL1-like [Benincasa hispida]) HSP 1 Score: 315.8 bits (808), Expect = 2.2e-82 Identity = 152/174 (87.36%), Postives = 163/174 (93.68%), Query Frame = 0
BLAST of MS025000 vs. NCBI nr
Match: XP_023000789.1 (protein MOTHER of FT and TFL1-like [Cucurbita maxima]) HSP 1 Score: 315.8 bits (808), Expect = 2.2e-82 Identity = 156/175 (89.14%), Postives = 165/175 (94.29%), Query Frame = 0
BLAST of MS025000 vs. NCBI nr
Match: XP_022927391.1 (protein MOTHER of FT and TFL1-like [Cucurbita moschata] >KAG6584038.1 Protein MOTHER of FT and TFL1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 315.8 bits (808), Expect = 2.2e-82 Identity = 156/175 (89.14%), Postives = 164/175 (93.71%), Query Frame = 0
BLAST of MS025000 vs. NCBI nr
Match: XP_023519622.1 (protein MOTHER of FT and TFL1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 315.5 bits (807), Expect = 2.9e-82 Identity = 157/175 (89.71%), Postives = 164/175 (93.71%), Query Frame = 0
BLAST of MS025000 vs. NCBI nr
Match: XP_008441938.1 (PREDICTED: protein MOTHER of FT and TFL1-like [Cucumis melo]) HSP 1 Score: 309.3 bits (791), Expect = 2.1e-80 Identity = 149/174 (85.63%), Postives = 162/174 (93.10%), Query Frame = 0
BLAST of MS025000 vs. ExPASy Swiss-Prot
Match: Q9XFK7 (Protein MOTHER of FT and TFL1 OS=Arabidopsis thaliana OX=3702 GN=MFT PE=1 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 1.8e-58 Identity = 108/174 (62.07%), Postives = 135/174 (77.59%), Query Frame = 0
BLAST of MS025000 vs. ExPASy Swiss-Prot
Match: Q9ASJ1 (Protein MOTHER of FT and TFL1 homolog 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MFT2 PE=2 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 1.9e-52 Identity = 96/175 (54.86%), Postives = 133/175 (76.00%), Query Frame = 0
BLAST of MS025000 vs. ExPASy Swiss-Prot
Match: Q656A5 (Protein MOTHER of FT and TFL1 homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MFT1 PE=3 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 1.6e-51 Identity = 99/177 (55.93%), Postives = 128/177 (72.32%), Query Frame = 0
BLAST of MS025000 vs. ExPASy Swiss-Prot
Match: P93003 (Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana OX=3702 GN=TFL1 PE=1 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 2.1e-43 Identity = 91/174 (52.30%), Postives = 119/174 (68.39%), Query Frame = 0
BLAST of MS025000 vs. ExPASy Swiss-Prot
Match: Q9XH44 (CEN-like protein 1 OS=Nicotiana tabacum OX=4097 GN=CET1 PE=2 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 4.0e-42 Identity = 88/175 (50.29%), Postives = 119/175 (68.00%), Query Frame = 0
BLAST of MS025000 vs. ExPASy TrEMBL
Match: A0A6J1KKY5 (protein MOTHER of FT and TFL1-like OS=Cucurbita maxima OX=3661 GN=LOC111495135 PE=3 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 1.1e-82 Identity = 156/175 (89.14%), Postives = 165/175 (94.29%), Query Frame = 0
BLAST of MS025000 vs. ExPASy TrEMBL
Match: A0A6J1EHJ1 (protein MOTHER of FT and TFL1-like OS=Cucurbita moschata OX=3662 GN=LOC111434225 PE=3 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 1.1e-82 Identity = 156/175 (89.14%), Postives = 164/175 (93.71%), Query Frame = 0
BLAST of MS025000 vs. ExPASy TrEMBL
Match: A0A1S3B4K3 (protein MOTHER of FT and TFL1-like OS=Cucumis melo OX=3656 GN=LOC103485930 PE=3 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 1.0e-80 Identity = 149/174 (85.63%), Postives = 162/174 (93.10%), Query Frame = 0
BLAST of MS025000 vs. ExPASy TrEMBL
Match: A0A0A0LRT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G071830 PE=3 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 7.3e-79 Identity = 146/174 (83.91%), Postives = 158/174 (90.80%), Query Frame = 0
BLAST of MS025000 vs. ExPASy TrEMBL
Match: A0A5D2QJS0 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A05G180700v1 PE=3 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 5.2e-69 Identity = 130/175 (74.29%), Postives = 152/175 (86.86%), Query Frame = 0
BLAST of MS025000 vs. TAIR 10
Match: AT1G18100.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 226.9 bits (577), Expect = 1.3e-59 Identity = 108/174 (62.07%), Postives = 135/174 (77.59%), Query Frame = 0
BLAST of MS025000 vs. TAIR 10
Match: AT5G03840.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 176.8 bits (447), Expect = 1.5e-44 Identity = 91/174 (52.30%), Postives = 119/174 (68.39%), Query Frame = 0
BLAST of MS025000 vs. TAIR 10
Match: AT2G27550.1 (centroradialis ) HSP 1 Score: 164.9 bits (416), Expect = 6.0e-41 Identity = 87/172 (50.58%), Postives = 112/172 (65.12%), Query Frame = 0
BLAST of MS025000 vs. TAIR 10
Match: AT5G62040.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 162.5 bits (410), Expect = 3.0e-40 Identity = 84/175 (48.00%), Postives = 113/175 (64.57%), Query Frame = 0
BLAST of MS025000 vs. TAIR 10
Match: AT4G20370.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 157.1 bits (396), Expect = 1.2e-38 Identity = 83/164 (50.61%), Postives = 106/164 (64.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|