MS024962 (gene) Bitter gourd (TR) v1

Overview
NameMS024962
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationscaffold254: 990360 .. 993956 (-)
RNA-Seq ExpressionMS024962
SyntenyMS024962
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACCGCCGAGATTCTGTTTCAACGATTCACCGGAAACTGCCCAAGAAGTTCTTCGTTCATCACTACTGAAAGCTCTGTCATCTGCCAAAAACACCTCACAGCTACGGAATATCCATTCCTTGATCATCATTTCAGGACTGAGCCTCTCCGTCGTCTTTTCCGGCAAACTCATAAGCAAGTACGCCCAGCTTAAAGACCCAATTTCTTCTGTTTCGGTTTTTCGCACTGTTTCTCCAACTTCCAATGTCTATCAATGGAATTCGATTATACGTGCTTCCACCCACAATGGTCTCTTCACGCAAGCACTTGGATATTACACTGAGATGCGTGAAAAAAAGCTTCAGCCTGATGCTTATACTTTTCCTTCTGTTATCAATTCATGTGCTCGACTTTTGGACCTGAATATGGGTCACGTTGTTCATGAACATGTTTTGGAAATGGGGTTTGGATCGGATTTGTATATTGGCAACGCATTGATCGATATGTATTCTAGATTTGGGGATCTTGATAAAGCACGATATGTGTTTGAGGAAATGTCTGACAGAGACAGTGTATCGTGGAATAGTTTAATTTCTGGATATTGTTCAAATGGGTTTTGGGAGGAGGCTCTGGAAATGTATCACAAGTCCAGAATGATTGGGATGGTACCCGATCGTTTCACCATGTCCAGCGTTTTACTTGCTTGTGGATGCTTAATGGCTGTTAAAGAAGGGTTGAATGTTCATGGGGCGATTGAGAAGATTGGAATTGGTCGAGATGTTATTATAGGTAATGGACTTCTTTCCATGTACTTCAAGTTTGAGAGACCAAGAGAAGCAGGTCAGGTTTTTGGCGAGATGGATGTGAAGGACTCGGTTACTTGGAATACCATGATTTGTGGATACTCCCAACTTGGGCAGTATGAAGAATCTGTGAAGTTATTCATGGAGATGATAGATGAATTTACTCCAGATTTATTGTCGGTTACATCAACCATTCGTGCCTGCGGGCACTTGGGAGATCTGCAGGTTGGAAAATATGTTCATAATTACTTAATCGGGAGCAGGTATGACTGTGATACTGTAGCATGTAATATCCTTATAGATATGTATGCTAAGTGTGGGGATCTTTTGGCTGCACAGCGAGTCTTCGACACAATGAAATGCAAGGATTCTGTGACATGGAACTCGTTAATTAACGGTTACACTCAACATGGCTATTACAAGGAGGGGGTGGAGACTTTTAAGATGGTGAAAAGGGAAAACGAACTGGATTCCGTGACTTTCATTCTGCTCCTATCTATATTTTCTCAATTAGCTAATATAGATCAGGGGAGAGGAATCCATTGTGATGTGATAAAATTTGGGTTTGAAGCTGAACTTGTCATTGGTAATGCACTTCTAGATATGTATGCTAAATGTGGTGGAATGGACGATTTATTGAGGGTGTTTGCATACATGAGAGCTCATGACATTATATCATGGAATACCCTCATTGCTTCAAGTGTTCATTTTGATGATTGCAGCATAGGATTTCAGGCAATTAGCCGAATGAGAACGGAAGGGTTGATTCCAGATGAGGCCACCATATTAGGTATCTTGCCCATGTGTTCCTTGCTTGCTGCACGGCGACAAGGGAAAGAGATCCATGGCTGCATTTTCAAGTTAGGATTTGAATCAGATGTCCCAACTGGAAATGCCCTAATTGAAATGTACTCCAAATGTGGTAGTCTAGAAAATTGTACTAAAGTATTCAACTATATGAAAGAAAAAGATGTGGTGACATGGACTGCTTTGATCTCTGCATTTGGAATGTATGGTGAAGGAAAGAAAGCATTAAAGGCTTTTCAGGATATGGAGTCAAGTGGAGTTTTTCCTGATTCTGTTACCTTCATTGCTCTCATTTTTGCTTGTAGTCATTCTGGAATGGTCAAAGAGGGGCTCACATACTTTGATCGAATGAAAACCGACTACAATATTGAACCTATGATGGAACATTATGCTTGTGTTGTTGATCTTTTGGCTCGATCTGGCTTATTAGCTCAAGCAGAGGAGTTTATTCTGTCAATGCCAATAAAACCAGATGCAAGTTTATGGGGAGCTTTACTTAGTGCCTGTCGAGCAACTGGGCACACGAACATCACTCAACGAATCTCAAAGCAAATTCTTCAGTTGAACTCAGACAATACTGGGTATTATGTGCTTGTATCAAATATATATGCCACATTGGGGAAGTGGGATCAAGTGAGAATGGTAAGAAATGCAATGAAAACTAAAGGGCTCAAAAAGGAACCTGGAAGTAGCTGGATTGAGATTCAGAAAAGGGTTTATGTATTTAGGACAGGTGATAAATCATTTGAACAGTATGACAAGGTCAAAGATTTACTCGAATACCTTGCGGGGTTAATGGCCAAGGAAGGCTATGTTGCAGACCTACAATTTTCTCTGCACGATGTCGAGGAAGATGATAAGAGAGACATGCTATGTGGGCATAGCGAAAGACTCGCGATAGCCTTCGGATTGTTGAATACAAAATCAGGGACCCCTTTATTGGTAATGAAAAACCTTCGAGTATGTGGAGATTGTCATACTGTAACCAAATACATAACTAAGATAATGCAAAGAGAAATACTGGTGAGAGATGCCAATCGGTTTCATTTATTCAAGGATGGAACCTGTAGTTGTGGAGATCACTGGTGAATGATTGATGTACTTAGTTATAATTCTTAATACCTGAGCATAATATCTTCACATTAGACTACAAATGAACTTTTTCATCCTTGTTCGAGCTTGGAGCAAATCTGAGAAGGTTGACTCCTGCCAAGTTGCACCAGTTGATCGCCGTCAAATTCCTAACGTTGCAAGTCAATGCTATCCTTTCTTTTGTCTTCTGGACAAAGATAACTGGAAATGGAAGAATTTAAATCAAGATGGGTCTTTTAAAGTAATTGATCTTTACTGATTGAACTGTTTTGATGAGATGATTCAATGCTACCTGATACTGCCATAAGTAGGTAGGATTGAGATTATGAGAAAGCAGATTGTGTGTGTGCTACTTCATGACAGGTAATTCTATTTTGACATGGCTACCAATTTTTAGAATGATCTATCTTGCACCAAGACGTGTTCTTTTATGTAAATTATTTTCTGTGTGCATTCCTGCAGATTCCTCCTACAATACTGACTGCTGATGACCTCTCAAGCTAGCCTATGAATCAAATTATAAATATATTTTCTAAAGGTTAGTCTTTCTTGCAGTGCTTCTGATTGCTCTTTCTAGCTATCAAGTGTTCTTAACAACTTCAGTGAAAGTGAAAAGGAAACGCAATAACAAACATTTCCATCATCCAGCGTTCCATTCGTGGAAAGAAGAGATGTTCAAAAGTTAATAAAAAATGGAAGATTTCCATAAGAAAGAAGAAGAATAATTCCATGTTCTGTTAACTACATGCTCTATTCCAATATAGCACTGTTATAGTAATTATTTACAATATTTGATTGTCATGCAGTTCTTGGCGCACTCTCTCTGCCTTCAGTTTTTCTTTAGAAGGCCAGTTTTCTTTGATACTTGGCGCATCGGGAAATTCTCCATGGCAGCTTCAACTTCACGTTTAA

mRNA sequence

ATGAAACCGCCGAGATTCTGTTTCAACGATTCACCGGAAACTGCCCAAGAAGTTCTTCGTTCATCACTACTGAAAGCTCTGTCATCTGCCAAAAACACCTCACAGCTACGGAATATCCATTCCTTGATCATCATTTCAGGACTGAGCCTCTCCGTCGTCTTTTCCGGCAAACTCATAAGCAAGTACGCCCAGCTTAAAGACCCAATTTCTTCTGTTTCGGTTTTTCGCACTGTTTCTCCAACTTCCAATGTCTATCAATGGAATTCGATTATACGTGCTTCCACCCACAATGGTCTCTTCACGCAAGCACTTGGATATTACACTGAGATGCGTGAAAAAAAGCTTCAGCCTGATGCTTATACTTTTCCTTCTGTTATCAATTCATGTGCTCGACTTTTGGACCTGAATATGGGTCACGTTGTTCATGAACATGTTTTGGAAATGGGGTTTGGATCGGATTTGTATATTGGCAACGCATTGATCGATATGTATTCTAGATTTGGGGATCTTGATAAAGCACGATATGTGTTTGAGGAAATGTCTGACAGAGACAGTGTATCGTGGAATAGTTTAATTTCTGGATATTGTTCAAATGGGTTTTGGGAGGAGGCTCTGGAAATGTATCACAAGTCCAGAATGATTGGGATGGTACCCGATCGTTTCACCATGTCCAGCGTTTTACTTGCTTGTGGATGCTTAATGGCTGTTAAAGAAGGGTTGAATGTTCATGGGGCGATTGAGAAGATTGGAATTGGTCGAGATGTTATTATAGGTAATGGACTTCTTTCCATGTACTTCAAGTTTGAGAGACCAAGAGAAGCAGGTCAGGTTTTTGGCGAGATGGATGTGAAGGACTCGGTTACTTGGAATACCATGATTTGTGGATACTCCCAACTTGGGCAGTATGAAGAATCTGTGAAGTTATTCATGGAGATGATAGATGAATTTACTCCAGATTTATTGTCGGTTACATCAACCATTCGTGCCTGCGGGCACTTGGGAGATCTGCAGGTTGGAAAATATGTTCATAATTACTTAATCGGGAGCAGGTATGACTGTGATACTGTAGCATGTAATATCCTTATAGATATGTATGCTAAGTGTGGGGATCTTTTGGCTGCACAGCGAGTCTTCGACACAATGAAATGCAAGGATTCTGTGACATGGAACTCGTTAATTAACGGTTACACTCAACATGGCTATTACAAGGAGGGGGTGGAGACTTTTAAGATGGTGAAAAGGGAAAACGAACTGGATTCCGTGACTTTCATTCTGCTCCTATCTATATTTTCTCAATTAGCTAATATAGATCAGGGGAGAGGAATCCATTGTGATGTGATAAAATTTGGGTTTGAAGCTGAACTTGTCATTGGTAATGCACTTCTAGATATGTATGCTAAATGTGGTGGAATGGACGATTTATTGAGGGTGTTTGCATACATGAGAGCTCATGACATTATATCATGGAATACCCTCATTGCTTCAAGTGTTCATTTTGATGATTGCAGCATAGGATTTCAGGCAATTAGCCGAATGAGAACGGAAGGGTTGATTCCAGATGAGGCCACCATATTAGGTATCTTGCCCATGTGTTCCTTGCTTGCTGCACGGCGACAAGGGAAAGAGATCCATGGCTGCATTTTCAAGTTAGGATTTGAATCAGATGTCCCAACTGGAAATGCCCTAATTGAAATGTACTCCAAATGTGGTAGTCTAGAAAATTGTACTAAAGTATTCAACTATATGAAAGAAAAAGATGTGGTGACATGGACTGCTTTGATCTCTGCATTTGGAATTTCTTGGCGCACTCTCTCTGCCTTCAGTTTTTCTTTAGAAGGCCAGTTTTCTTTGATACTTGGCGCATCGGGAAATTCTCCATGGCAGCTTCAACTTCACGTTTAA

Coding sequence (CDS)

ATGAAACCGCCGAGATTCTGTTTCAACGATTCACCGGAAACTGCCCAAGAAGTTCTTCGTTCATCACTACTGAAAGCTCTGTCATCTGCCAAAAACACCTCACAGCTACGGAATATCCATTCCTTGATCATCATTTCAGGACTGAGCCTCTCCGTCGTCTTTTCCGGCAAACTCATAAGCAAGTACGCCCAGCTTAAAGACCCAATTTCTTCTGTTTCGGTTTTTCGCACTGTTTCTCCAACTTCCAATGTCTATCAATGGAATTCGATTATACGTGCTTCCACCCACAATGGTCTCTTCACGCAAGCACTTGGATATTACACTGAGATGCGTGAAAAAAAGCTTCAGCCTGATGCTTATACTTTTCCTTCTGTTATCAATTCATGTGCTCGACTTTTGGACCTGAATATGGGTCACGTTGTTCATGAACATGTTTTGGAAATGGGGTTTGGATCGGATTTGTATATTGGCAACGCATTGATCGATATGTATTCTAGATTTGGGGATCTTGATAAAGCACGATATGTGTTTGAGGAAATGTCTGACAGAGACAGTGTATCGTGGAATAGTTTAATTTCTGGATATTGTTCAAATGGGTTTTGGGAGGAGGCTCTGGAAATGTATCACAAGTCCAGAATGATTGGGATGGTACCCGATCGTTTCACCATGTCCAGCGTTTTACTTGCTTGTGGATGCTTAATGGCTGTTAAAGAAGGGTTGAATGTTCATGGGGCGATTGAGAAGATTGGAATTGGTCGAGATGTTATTATAGGTAATGGACTTCTTTCCATGTACTTCAAGTTTGAGAGACCAAGAGAAGCAGGTCAGGTTTTTGGCGAGATGGATGTGAAGGACTCGGTTACTTGGAATACCATGATTTGTGGATACTCCCAACTTGGGCAGTATGAAGAATCTGTGAAGTTATTCATGGAGATGATAGATGAATTTACTCCAGATTTATTGTCGGTTACATCAACCATTCGTGCCTGCGGGCACTTGGGAGATCTGCAGGTTGGAAAATATGTTCATAATTACTTAATCGGGAGCAGGTATGACTGTGATACTGTAGCATGTAATATCCTTATAGATATGTATGCTAAGTGTGGGGATCTTTTGGCTGCACAGCGAGTCTTCGACACAATGAAATGCAAGGATTCTGTGACATGGAACTCGTTAATTAACGGTTACACTCAACATGGCTATTACAAGGAGGGGGTGGAGACTTTTAAGATGGTGAAAAGGGAAAACGAACTGGATTCCGTGACTTTCATTCTGCTCCTATCTATATTTTCTCAATTAGCTAATATAGATCAGGGGAGAGGAATCCATTGTGATGTGATAAAATTTGGGTTTGAAGCTGAACTTGTCATTGGTAATGCACTTCTAGATATGTATGCTAAATGTGGTGGAATGGACGATTTATTGAGGGTGTTTGCATACATGAGAGCTCATGACATTATATCATGGAATACCCTCATTGCTTCAAGTGTTCATTTTGATGATTGCAGCATAGGATTTCAGGCAATTAGCCGAATGAGAACGGAAGGGTTGATTCCAGATGAGGCCACCATATTAGGTATCTTGCCCATGTGTTCCTTGCTTGCTGCACGGCGACAAGGGAAAGAGATCCATGGCTGCATTTTCAAGTTAGGATTTGAATCAGATGTCCCAACTGGAAATGCCCTAATTGAAATGTACTCCAAATGTGGTAGTCTAGAAAATTGTACTAAAGTATTCAACTATATGAAAGAAAAAGATGTGGTGACATGGACTGCTTTGATCTCTGCATTTGGAATTTCTTGGCGCACTCTCTCTGCCTTCAGTTTTTCTTTAGAAGGCCAGTTTTCTTTGATACTTGGCGCATCGGGAAATTCTCCATGGCAGCTTCAACTTCACGTTTAA

Protein sequence

MKPPRFCFNDSPETAQEVLRSSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKLISKYAQLKDPISSVSVFRTVSPTSNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPDAYTFPSVINSCARLLDLNMGHVVHEHVLEMGFGSDLYIGNALIDMYSRFGDLDKARYVFEEMSDRDSVSWNSLISGYCSNGFWEEALEMYHKSRMIGMVPDRFTMSSVLLACGCLMAVKEGLNVHGAIEKIGIGRDVIIGNGLLSMYFKFERPREAGQVFGEMDVKDSVTWNTMICGYSQLGQYEESVKLFMEMIDEFTPDLLSVTSTIRACGHLGDLQVGKYVHNYLIGSRYDCDTVACNILIDMYAKCGDLLAAQRVFDTMKCKDSVTWNSLINGYTQHGYYKEGVETFKMVKRENELDSVTFILLLSIFSQLANIDQGRGIHCDVIKFGFEAELVIGNALLDMYAKCGGMDDLLRVFAYMRAHDIISWNTLIASSVHFDDCSIGFQAISRMRTEGLIPDEATILGILPMCSLLAARRQGKEIHGCIFKLGFESDVPTGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFGISWRTLSAFSFSLEGQFSLILGASGNSPWQLQLHV
Homology
BLAST of MS024962 vs. NCBI nr
Match: XP_022146916.1 (pentatricopeptide repeat-containing protein At3g03580 [Momordica charantia])

HSP 1 Score: 1184.9 bits (3064), Expect = 0.0e+00
Identity = 581/599 (96.99%), Postives = 592/599 (98.83%), Query Frame = 0

Query: 1   MKPPRFCFNDSPETAQEVLRSSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKLIS 60
           MKPPRFCFNDSPETAQEVLRSSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKLIS
Sbjct: 1   MKPPRFCFNDSPETAQEVLRSSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKLIS 60

Query: 61  KYAQLKDPISSVSVFRTVSPTSNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPDAY 120
           KYAQLKDPISSVSVFRTVSPTSNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPDAY
Sbjct: 61  KYAQLKDPISSVSVFRTVSPTSNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPDAY 120

Query: 121 TFPSVINSCARLLDLNMGHVVHEHVLEMGFGSDLYIGNALIDMYSRFGDLDKARYVFEEM 180
           TFPSVINSCARLLDLNMGHVVHEHV+EMGFGSDLYIGNALIDMYSRFGDLDKARYVFEEM
Sbjct: 121 TFPSVINSCARLLDLNMGHVVHEHVMEMGFGSDLYIGNALIDMYSRFGDLDKARYVFEEM 180

Query: 181 SDRDSVSWNSLISGYCSNGFWEEALEMYHKSRMIGMVPDRFTMSSVLLACGCLMAVKEGL 240
           SDRDSVSWNSLISGYCSNGFWEEALEMYHKSRMIGMVPDRFT +SVLLACG LMAVKEGL
Sbjct: 181 SDRDSVSWNSLISGYCSNGFWEEALEMYHKSRMIGMVPDRFT-TSVLLACGSLMAVKEGL 240

Query: 241 NVHGAIEKIGIGRDVIIGNGLLSMYFKFERPREAGQVFGEMDVKDSVTWNTMICGYSQLG 300
           NVHGAIEKIGIGRDVIIGNGLLSMYFKFERPREAGQVFGEMDVKDSV+WNTMICGYSQLG
Sbjct: 241 NVHGAIEKIGIGRDVIIGNGLLSMYFKFERPREAGQVFGEMDVKDSVSWNTMICGYSQLG 300

Query: 301 QYEESVKLFMEMIDEFTPDLLSVTSTIRACGHLGDLQVGKYVHNYLIGSRYDCDTVACNI 360
           QYEESVKLFMEMID+FTPDLLSVTSTIRACGHL DLQVGKYVHNYLIGS Y+CDTVACNI
Sbjct: 301 QYEESVKLFMEMIDKFTPDLLSVTSTIRACGHLADLQVGKYVHNYLIGSGYECDTVACNI 360

Query: 361 LIDMYAKCGDLLAAQRVFDTMKCKDSVTWNSLINGYTQHGYYKEGVETFKMVKRENELDS 420
           LIDMYAKCGDLLAAQ+VFD MKCKDSVTWNSLINGYTQHGYYKEGVETFKM+KRENELDS
Sbjct: 361 LIDMYAKCGDLLAAQQVFDAMKCKDSVTWNSLINGYTQHGYYKEGVETFKMMKRENELDS 420

Query: 421 VTFILLLSIFSQLANIDQGRGIHCDVIKFGFEAELVIGNALLDMYAKCGGMDDLLRVFAY 480
           VTF+LLLS+FSQLANIDQGRGIHCD+IK GFEAELVIGNALLDMYAKCGGMDDLLRVFAY
Sbjct: 421 VTFVLLLSMFSQLANIDQGRGIHCDMIKLGFEAELVIGNALLDMYAKCGGMDDLLRVFAY 480

Query: 481 MRAHDIISWNTLIASSVHFDDCSIGFQAISRMRTEGLIPDEATILGILPMCSLLAARRQG 540
           MRAHDIISWNTLIASSVHFDDCSIGFQAI RMRTEGLIPDEATILGILPMCSLLAARRQG
Sbjct: 481 MRAHDIISWNTLIASSVHFDDCSIGFQAIIRMRTEGLIPDEATILGILPMCSLLAARRQG 540

Query: 541 KEIHGCIFKLGFESDVPTGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFGI 600
           KEIHGCIFKLGFESDVPTGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG+
Sbjct: 541 KEIHGCIFKLGFESDVPTGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFGM 598

BLAST of MS024962 vs. NCBI nr
Match: XP_038897296.1 (pentatricopeptide repeat-containing protein At3g03580 [Benincasa hispida])

HSP 1 Score: 1063.9 bits (2750), Expect = 5.3e-307
Identity = 512/601 (85.19%), Postives = 560/601 (93.18%), Query Frame = 0

Query: 1   MKPPRFC--FNDSPETAQEVLRSSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKL 60
           M PP+FC  FN SPET+QE +RSSLLKALSSAKNTSQLR +HSLII SGL+LSV+FSGKL
Sbjct: 1   MTPPKFCSNFNSSPETSQEFIRSSLLKALSSAKNTSQLRTVHSLIITSGLALSVIFSGKL 60

Query: 61  ISKYAQLKDPISSVSVFRTVSPTSNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPD 120
           ISKYAQLKDPISSVSVFRTVSPT NVYQWNSIIRA THNGLFTQALGYYT+MREKKLQPD
Sbjct: 61  ISKYAQLKDPISSVSVFRTVSPTHNVYQWNSIIRALTHNGLFTQALGYYTKMREKKLQPD 120

Query: 121 AYTFPSVINSCARLLDLNMGHVVHEHVLEMGFGSDLYIGNALIDMYSRFGDLDKARYVFE 180
           A+TFPSVINSC RLLDL  G +VHEH++EMGF SDLYIGNALIDMYSR  DLD AR VFE
Sbjct: 121 AFTFPSVINSCGRLLDLKTGRIVHEHIVEMGFESDLYIGNALIDMYSRSVDLDNARNVFE 180

Query: 181 EMSDRDSVSWNSLISGYCSNGFWEEALEMYHKSRMIGMVPDRFTMSSVLLACGCLMAVKE 240
           EMSDRD VSWNSLISGYC NGFWEEAL+MYHKSRM GMVPD FTMSSVLL+CG LMA+KE
Sbjct: 181 EMSDRDRVSWNSLISGYCCNGFWEEALDMYHKSRMTGMVPDCFTMSSVLLSCGSLMAIKE 240

Query: 241 GLNVHGAIEKIGIGRDVIIGNGLLSMYFKFERPREAGQVFGEMDVKDSVTWNTMICGYSQ 300
           G+ VHGAIEKIGIG DVIIGNGLLSMYFKFERPREAG+VF EM VKDSVTWNTMICGYSQ
Sbjct: 241 GVTVHGAIEKIGIGGDVIIGNGLLSMYFKFERPREAGRVFSEMAVKDSVTWNTMICGYSQ 300

Query: 301 LGQYEESVKLFMEMIDEFTPDLLSVTSTIRACGHLGDLQVGKYVHNYLIGSRYDCDTVAC 360
           LG++EESVKLFMEMIDEFTPD+L++TSTIRACGHLGDLQVGK+VH YLIGS Y+CDT+AC
Sbjct: 301 LGRHEESVKLFMEMIDEFTPDVLTITSTIRACGHLGDLQVGKFVHKYLIGSGYECDTIAC 360

Query: 361 NILIDMYAKCGDLLAAQRVFDTMKCKDSVTWNSLINGYTQHGYYKEGVETFKMVKRENEL 420
           NILIDMYAKCGDLLAAQ VFD+ KCKDSVTWNS+INGYTQ GYYKEGVE FKM+K E++ 
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDSTKCKDSVTWNSIINGYTQSGYYKEGVEKFKMMKMESKP 420

Query: 421 DSVTFILLLSIFSQLANIDQGRGIHCDVIKFGFEAELVIGNALLDMYAKCGGMDDLLRVF 480
           DSVTF+LLLSIFSQLA I+QGRGIHCDVIKFGF+AEL+IGN+LLDMYAKCGGM+DLL++F
Sbjct: 421 DSVTFVLLLSIFSQLAEINQGRGIHCDVIKFGFDAELIIGNSLLDMYAKCGGMNDLLKMF 480

Query: 481 AYMRAHDIISWNTLIASSVHFDDCSIGFQAISRMRTEGLIPDEATILGILPMCSLLAARR 540
           +YMRAHDIISWNTLIASSVHFDDC++GF+AI+ MRTEGL+PDEAT+LGILPM SLLA R+
Sbjct: 481 SYMRAHDIISWNTLIASSVHFDDCNVGFRAINEMRTEGLVPDEATVLGILPMSSLLAVRQ 540

Query: 541 QGKEIHGCIFKLGFESDVPTGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600
           QGKEIHGCIFKLGFES VP GNALIEMYSKCGSLENC+KVF+YMKEKDVVTWTALISAFG
Sbjct: 541 QGKEIHGCIFKLGFESHVPIGNALIEMYSKCGSLENCSKVFDYMKEKDVVTWTALISAFG 600

BLAST of MS024962 vs. NCBI nr
Match: KAG7028688.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1055.4 bits (2728), Expect = 1.9e-304
Identity = 515/601 (85.69%), Postives = 551/601 (91.68%), Query Frame = 0

Query: 1   MKPPRF--CFNDSPETAQEVLRSSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKL 60
           MKPP+F   FN SPETAQE+LRSSLLKALSSAKNTSQLR +HS IIISGL LSVVFSGKL
Sbjct: 1   MKPPKFRSNFNSSPETAQELLRSSLLKALSSAKNTSQLRAVHSWIIISGLGLSVVFSGKL 60

Query: 61  ISKYAQLKDPISSVSVFRTVSPTSNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPD 120
           ISKYAQLKDPISSVSVFRTVSPT NVYQWNSIIRA T NGLFTQALGYYTEMRE KLQPD
Sbjct: 61  ISKYAQLKDPISSVSVFRTVSPTRNVYQWNSIIRALTRNGLFTQALGYYTEMRETKLQPD 120

Query: 121 AYTFPSVINSCARLLDLNMGHVVHEHVLEMGFGSDLYIGNALIDMYSRFGDLDKARYVFE 180
           AYTFPSVINSCAR+LDL MG VVHEHV EMGF SDLYIGNALIDMY RFGDL+ ARY+F+
Sbjct: 121 AYTFPSVINSCARILDLKMGRVVHEHVEEMGFESDLYIGNALIDMYCRFGDLENARYMFD 180

Query: 181 EMSDRDSVSWNSLISGYCSNGFWEEALEMYHKSRMIGMVPDRFTMSSVLLACGCLMAVKE 240
           EMSDRDSVSWNSLISGYCSNGFWEEAL+MYHKSRMIGMVPD FTMSSVLLACG L AV+E
Sbjct: 181 EMSDRDSVSWNSLISGYCSNGFWEEALDMYHKSRMIGMVPDCFTMSSVLLACGSLTAVEE 240

Query: 241 GLNVHGAIEKIGIGRDVIIGNGLLSMYFKFERPREAGQVFGEMDVKDSVTWNTMICGYSQ 300
           GL +HG IEKIGIG D++ GNGLLSMYFKFERPRE G+VF EM  KDSVTWNTMICGYSQ
Sbjct: 241 GLKIHGVIEKIGIGGDIVTGNGLLSMYFKFERPRETGRVFTEMAAKDSVTWNTMICGYSQ 300

Query: 301 LGQYEESVKLFMEMIDEFTPDLLSVTSTIRACGHLGDLQVGKYVHNYLIGSRYDCDTVAC 360
           LG +EESVKLFM MIDEF PD+LSVTSTIRACGHLGDL++GKYVH YLIG  Y+CDTVAC
Sbjct: 301 LGWHEESVKLFMAMIDEFAPDVLSVTSTIRACGHLGDLRIGKYVHKYLIGRGYECDTVAC 360

Query: 361 NILIDMYAKCGDLLAAQRVFDTMKCKDSVTWNSLINGYTQHGYYKEGVETFKMVKRENEL 420
           NILIDMYAKCGDLLAAQ VFDTM CKDSVTWNSLINGYTQ GYYK+G+E FK++KRE++ 
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTMNCKDSVTWNSLINGYTQRGYYKKGMENFKIMKRESKP 420

Query: 421 DSVTFILLLSIFSQLANIDQGRGIHCDVIKFGFEAELVIGNALLDMYAKCGGMDDLLRVF 480
           DSVTF+LLLS+ SQLA+I QGRGIHCDVIK GFE EL+IGNALLDMYAKCGGMDDLL+ F
Sbjct: 421 DSVTFVLLLSLCSQLADISQGRGIHCDVIKSGFEDELIIGNALLDMYAKCGGMDDLLKAF 480

Query: 481 AYMRAHDIISWNTLIASSVHFDDCSIGFQAISRMRTEGLIPDEATILGILPMCSLLAARR 540
           +YMRA DIISWNTLIASSVHFDDC++G++AIS MRTEGL+PDEATILGILPMCSLLAARR
Sbjct: 481 SYMRARDIISWNTLIASSVHFDDCTVGYRAISEMRTEGLMPDEATILGILPMCSLLAARR 540

Query: 541 QGKEIHGCIFKLGFESDVPTGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600
           QGKEIH CIFKLG E DVP GNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG
Sbjct: 541 QGKEIHCCIFKLGLELDVPIGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600

BLAST of MS024962 vs. NCBI nr
Match: KAG6597217.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1055.4 bits (2728), Expect = 1.9e-304
Identity = 515/601 (85.69%), Postives = 551/601 (91.68%), Query Frame = 0

Query: 1   MKPPRF--CFNDSPETAQEVLRSSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKL 60
           MKPP+F   FN SPETAQE+LRSSLLKALSSAKNTSQLR +HS IIISGL LSVVFSGKL
Sbjct: 1   MKPPKFRSNFNSSPETAQELLRSSLLKALSSAKNTSQLRAVHSWIIISGLGLSVVFSGKL 60

Query: 61  ISKYAQLKDPISSVSVFRTVSPTSNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPD 120
           ISKYAQLKDPISSVSVFRTVSPT NVYQWNSIIRA T NGLFTQALGYYTEMRE KLQPD
Sbjct: 61  ISKYAQLKDPISSVSVFRTVSPTRNVYQWNSIIRALTRNGLFTQALGYYTEMRETKLQPD 120

Query: 121 AYTFPSVINSCARLLDLNMGHVVHEHVLEMGFGSDLYIGNALIDMYSRFGDLDKARYVFE 180
           AYTFPSVINSCAR+LDL MG VVHEHV EMGF SDLYIGNALIDMY RFGDL+ ARY+F+
Sbjct: 121 AYTFPSVINSCARILDLKMGRVVHEHVEEMGFESDLYIGNALIDMYCRFGDLENARYMFD 180

Query: 181 EMSDRDSVSWNSLISGYCSNGFWEEALEMYHKSRMIGMVPDRFTMSSVLLACGCLMAVKE 240
           EMSDRDSVSWNSLISGYCSNGFWEEAL+MYHKSR+IGMVPD FTMSSVLLACG L AV+E
Sbjct: 181 EMSDRDSVSWNSLISGYCSNGFWEEALDMYHKSRIIGMVPDCFTMSSVLLACGSLTAVEE 240

Query: 241 GLNVHGAIEKIGIGRDVIIGNGLLSMYFKFERPREAGQVFGEMDVKDSVTWNTMICGYSQ 300
           GL +HG IEKIGIG D++ GNGLLSMYFKFERPRE G+VF EM  KDSVTWNTMICGYSQ
Sbjct: 241 GLKIHGVIEKIGIGGDIVTGNGLLSMYFKFERPRETGRVFTEMAAKDSVTWNTMICGYSQ 300

Query: 301 LGQYEESVKLFMEMIDEFTPDLLSVTSTIRACGHLGDLQVGKYVHNYLIGSRYDCDTVAC 360
           LG +EESVKLFM MIDEF PD+LSVTSTIRACGHLGDL++GKYVH YLIG  Y+CDTVAC
Sbjct: 301 LGWHEESVKLFMAMIDEFAPDVLSVTSTIRACGHLGDLRIGKYVHKYLIGRGYECDTVAC 360

Query: 361 NILIDMYAKCGDLLAAQRVFDTMKCKDSVTWNSLINGYTQHGYYKEGVETFKMVKRENEL 420
           NILIDMYAKCGDLLAAQ VFDTM CKDSVTWNSLINGYTQ GYYKEG+E FK++KRE++ 
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTMNCKDSVTWNSLINGYTQRGYYKEGMENFKIMKRESKP 420

Query: 421 DSVTFILLLSIFSQLANIDQGRGIHCDVIKFGFEAELVIGNALLDMYAKCGGMDDLLRVF 480
           DSVTF+LLLS+ SQLA+I QGRGIHCDVIK GFE EL+IGNALLDMYAKCGGMDDLL+ F
Sbjct: 421 DSVTFVLLLSLCSQLADISQGRGIHCDVIKSGFEDELIIGNALLDMYAKCGGMDDLLKAF 480

Query: 481 AYMRAHDIISWNTLIASSVHFDDCSIGFQAISRMRTEGLIPDEATILGILPMCSLLAARR 540
           +YMRA DIISWNTLIASSVHFDDC++G++AIS MRTEGL+PDEATILGILPMCSLLAARR
Sbjct: 481 SYMRARDIISWNTLIASSVHFDDCTVGYRAISEMRTEGLMPDEATILGILPMCSLLAARR 540

Query: 541 QGKEIHGCIFKLGFESDVPTGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600
           QGKEIH CIFKLG E DVP GNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG
Sbjct: 541 QGKEIHCCIFKLGLELDVPIGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600

BLAST of MS024962 vs. NCBI nr
Match: XP_023540929.1 (pentatricopeptide repeat-containing protein At3g03580 [Cucurbita pepo subsp. pepo] >XP_023540930.1 pentatricopeptide repeat-containing protein At3g03580 [Cucurbita pepo subsp. pepo] >XP_023540931.1 pentatricopeptide repeat-containing protein At3g03580 [Cucurbita pepo subsp. pepo] >XP_023540932.1 pentatricopeptide repeat-containing protein At3g03580 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1053.5 bits (2723), Expect = 7.2e-304
Identity = 515/601 (85.69%), Postives = 549/601 (91.35%), Query Frame = 0

Query: 1   MKPPRF--CFNDSPETAQEVLRSSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKL 60
           MKPP+F   FN SPETAQE+LRSSLLKALSSAKNTSQLR +HS IIISG  LSVVFSGKL
Sbjct: 1   MKPPKFRSNFNSSPETAQELLRSSLLKALSSAKNTSQLRAVHSWIIISGFGLSVVFSGKL 60

Query: 61  ISKYAQLKDPISSVSVFRTVSPTSNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPD 120
           ISKYAQLKDPISSVSVFRTVSPT NVYQWNSIIRA T NGLFTQALGYYTEMRE KLQPD
Sbjct: 61  ISKYAQLKDPISSVSVFRTVSPTRNVYQWNSIIRALTRNGLFTQALGYYTEMRETKLQPD 120

Query: 121 AYTFPSVINSCARLLDLNMGHVVHEHVLEMGFGSDLYIGNALIDMYSRFGDLDKARYVFE 180
           AYTFPSVINSCARLLDL MG  VHEHV EMGF SDLYIGNALIDMY RFGDL+ ARY+F+
Sbjct: 121 AYTFPSVINSCARLLDLKMGRDVHEHVEEMGFESDLYIGNALIDMYCRFGDLENARYMFD 180

Query: 181 EMSDRDSVSWNSLISGYCSNGFWEEALEMYHKSRMIGMVPDRFTMSSVLLACGCLMAVKE 240
           EMS+RDSVSWNSLISGYCSNGFWEEAL+MYHKSRMIGMVPD FTMSSVLLACG L AV+E
Sbjct: 181 EMSNRDSVSWNSLISGYCSNGFWEEALDMYHKSRMIGMVPDCFTMSSVLLACGSLTAVEE 240

Query: 241 GLNVHGAIEKIGIGRDVIIGNGLLSMYFKFERPREAGQVFGEMDVKDSVTWNTMICGYSQ 300
           GL +HG IEKIGIG D++ GNGLLSMYFKFERPRE G+VF EM  KDSVTWNTMICGYSQ
Sbjct: 241 GLKIHGVIEKIGIGGDIVTGNGLLSMYFKFERPRETGRVFAEMAAKDSVTWNTMICGYSQ 300

Query: 301 LGQYEESVKLFMEMIDEFTPDLLSVTSTIRACGHLGDLQVGKYVHNYLIGSRYDCDTVAC 360
           LG +EESVKLFM MIDEF PD+LSVTSTIRACGHLGDL++GKYVH YLIG  Y+CDTVAC
Sbjct: 301 LGWHEESVKLFMAMIDEFVPDVLSVTSTIRACGHLGDLRIGKYVHKYLIGRGYECDTVAC 360

Query: 361 NILIDMYAKCGDLLAAQRVFDTMKCKDSVTWNSLINGYTQHGYYKEGVETFKMVKRENEL 420
           NILIDMYAKCGDLLAAQ VFDTM CKDSVTWNSLINGYTQ GY+KEGVE FKM+KRE++ 
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTMNCKDSVTWNSLINGYTQRGYFKEGVENFKMMKRESKP 420

Query: 421 DSVTFILLLSIFSQLANIDQGRGIHCDVIKFGFEAELVIGNALLDMYAKCGGMDDLLRVF 480
           DSVTF+LLLS+ SQLA+I QGRGIHCDVIK GFE EL+IGNALLDMYAKCGGMDDLL+ F
Sbjct: 421 DSVTFVLLLSLCSQLADISQGRGIHCDVIKSGFEDELIIGNALLDMYAKCGGMDDLLKAF 480

Query: 481 AYMRAHDIISWNTLIASSVHFDDCSIGFQAISRMRTEGLIPDEATILGILPMCSLLAARR 540
           +YMRA DIISWNTLIASSVHFDDC++GF+AI+ MRTEGL+PDEATILGILPMCSLLAARR
Sbjct: 481 SYMRARDIISWNTLIASSVHFDDCTVGFRAINEMRTEGLMPDEATILGILPMCSLLAARR 540

Query: 541 QGKEIHGCIFKLGFESDVPTGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600
           QGKEIH CIFKLG E DVP GNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG
Sbjct: 541 QGKEIHCCIFKLGLELDVPIGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600

BLAST of MS024962 vs. ExPASy Swiss-Prot
Match: Q9SS60 (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H23 PE=2 SV=1)

HSP 1 Score: 652.9 bits (1683), Expect = 3.7e-186
Identity = 307/576 (53.30%), Postives = 430/576 (74.65%), Query Frame = 0

Query: 25  KALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKLISKYAQLKDPISSVSVFRTVSPTSNV 84
           +ALSS+ N ++LR IH+L+I  GL  S  FSGKLI KY+  ++P SS+SVFR VSP  NV
Sbjct: 12  RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71

Query: 85  YQWNSIIRASTHNGLFTQALGYYTEMREKKLQPDAYTFPSVINSCARLLDLNMGHVVHEH 144
           Y WNSIIRA + NGLF +AL +Y ++RE K+ PD YTFPSVI +CA L D  MG +V+E 
Sbjct: 72  YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131

Query: 145 VLEMGFGSDLYIGNALIDMYSRFGDLDKARYVFEEMSDRDSVSWNSLISGYCSNGFWEEA 204
           +L+MGF SDL++GNAL+DMYSR G L +AR VF+EM  RD VSWNSLISGY S+G++EEA
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191

Query: 205 LEMYHKSRMIGMVPDRFTMSSVLLACGCLMAVKEGLNVHGAIEKIGIGRDVIIGNGLLSM 264
           LE+YH+ +   +VPD FT+SSVL A G L+ VK+G  +HG   K G+   V++ NGL++M
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251

Query: 265 YFKFERPREAGQVFGEMDVKDSVTWNTMICGYSQLGQYEESVKLFMEMIDEFTPDLLSVT 324
           Y KF RP +A +VF EMDV+DSV++NTMICGY +L   EESV++F+E +D+F PDLL+V+
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVS 311

Query: 325 STIRACGHLGDLQVGKYVHNYLIGSRYDCDTVACNILIDMYAKCGDLLAAQRVFDTMKCK 384
           S +RACGHL DL + KY++NY++ + +  ++   NILID+YAKCGD++ A+ VF++M+CK
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK 371

Query: 385 DSVTWNSLINGYTQHGYYKEGVETFKMVK-RENELDSVTFILLLSIFSQLANIDQGRGIH 444
           D+V+WNS+I+GY Q G   E ++ FKM+   E + D +T+++L+S+ ++LA++  G+G+H
Sbjct: 372 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLH 431

Query: 445 CDVIKFGFEAELVIGNALLDMYAKCGGMDDLLRVFAYMRAHDIISWNTLIASSVHFDDCS 504
            + IK G   +L + NAL+DMYAKCG + D L++F+ M   D ++WNT+I++ V F D +
Sbjct: 432 SNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFA 491

Query: 505 IGFQAISRMRTEGLIPDEATILGILPMCSLLAARRQGKEIHGCIFKLGFESDVPTGNALI 564
            G Q  ++MR   ++PD AT L  LPMC+ LAA+R GKEIH C+ + G+ES++  GNALI
Sbjct: 492 TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALI 551

Query: 565 EMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFGI 600
           EMYSKCG LEN ++VF  M  +DVVTWT +I A+G+
Sbjct: 552 EMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGM 587

BLAST of MS024962 vs. ExPASy Swiss-Prot
Match: Q9STE1 (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E36 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 4.7e-88
Identity = 183/581 (31.50%), Postives = 300/581 (51.64%), Query Frame = 0

Query: 21  SSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKLISKYAQLKDPISSVSVF-RTVS 80
           S LL+A S+     Q + +H+ +I++ +S       +++  YA          +F R   
Sbjct: 39  SLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDL 98

Query: 81  PTSNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPDAYTFPSVINSCARLLDLNMGH 140
             S++  WNSII +   NGL  QAL +Y +M    + PD  TFP ++ +C  L +     
Sbjct: 99  RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGID 158

Query: 141 VVHEHVLEMGFGSDLYIGNALIDMYSRFGDLDKARYVFEEMSDRDSVSWNSLISGYCSNG 200
            + + V  +G   + ++ ++LI  Y  +G +D    +F+ +  +D V WN +++GY   G
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218

Query: 201 FWEEALEMYHKSRMIGMVPDRFTMSSVLLACGCLMAVKEGLNVHGAIEKIGIGRDVIIGN 260
             +  ++ +   RM  + P+  T   VL  C   + +  G+ +HG +   G+  +  I N
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278

Query: 261 GLLSMYFKFERPREAGQVFGEMDVKDSVTWNTMICGYSQLGQYEESVKLFMEMIDE-FTP 320
            LLSMY K  R  +A ++F  M   D+VTWN MI GY Q G  EES+  F EMI     P
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 338

Query: 321 DLLSVTSTIRACGHLGDLQVGKYVHNYLIGSRYDCDTVACNILIDMYAKCGDLLAAQRVF 380
           D ++ +S + +     +L+  K +H Y++      D    + LID Y KC  +  AQ +F
Sbjct: 339 DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF 398

Query: 381 DTMKCKDSVTWNSLINGYTQHGYYKEGVETFK-MVKRENELDSVTFILLLSIFSQLANID 440
                 D V + ++I+GY  +G Y + +E F+ +VK +   + +T + +L +   L  + 
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALK 458

Query: 441 QGRGIHCDVIKFGFEAELVIGNALLDMYAKCGGMDDLLRVFAYMRAHDIISWNTLIASSV 500
            GR +H  +IK GF+    IG A++DMYAKCG M+    +F  +   DI+SWN++I    
Sbjct: 459 LGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCA 518

Query: 501 HFDDCSIGFQAISRMRTEGLIPDEATILGILPMCSLLAARRQGKEIHGCIFKLGFESDVP 560
             D+ S       +M   G+  D  +I   L  C+ L +   GK IHG + K    SDV 
Sbjct: 519 QSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVY 578

Query: 561 TGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 599
           + + LI+MY+KCG+L+    VF  MKEK++V+W ++I+A G
Sbjct: 579 SESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACG 619

BLAST of MS024962 vs. ExPASy Swiss-Prot
Match: Q9SVP7 (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 323.2 bits (827), Expect = 6.7e-87
Identity = 175/564 (31.03%), Postives = 300/564 (53.19%), Query Frame = 0

Query: 36  LRNIHSLIIISGLSLSVVFSGKLISKYAQLKDPISSVSVFRTVSPTSNVYQWNSIIRAST 95
           +  IH+ I+  GL  S V    LI  Y++      +  VF  +    +   W ++I   +
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR-LKDHSSWVAMISGLS 265

Query: 96  HNGLFTQALGYYTEMREKKLQPDAYTFPSVINSCARLLDLNMGHVVHEHVLEMGFGSDLY 155
            N    +A+  + +M    + P  Y F SV+++C ++  L +G  +H  VL++GF SD Y
Sbjct: 266 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 325

Query: 156 IGNALIDMYSRFGDLDKARYVFEEMSDRDSVSWNSLISGYCSNGFWEEALEMYHKSRMIG 215
           + NAL+ +Y   G+L  A ++F  MS RD+V++N+LI+G    G+ E+A+E++ +  + G
Sbjct: 326 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG 385

Query: 216 MVPDRFTMSSVLLACGCLMAVKEGLNVHGAIEKIGIGRDVIIGNGLLSMYFKFERPREAG 275
           + PD  T++S+++AC     +  G  +H    K+G   +  I   LL++Y K      A 
Sbjct: 386 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 445

Query: 276 QVFGEMDVKDSVTWNTMICGYSQLGQYEESVKLFMEM-IDEFTPDLLSVTSTIRACGHLG 335
             F E +V++ V WN M+  Y  L     S ++F +M I+E  P+  +  S ++ C  LG
Sbjct: 446 DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 505

Query: 336 DLQVGKYVHNYLIGSRYDCDTVACNILIDMYAKCGDLLAAQRVFDTMKCKDSVTWNSLIN 395
           DL++G+ +H+ +I + +  +   C++LIDMYAK G L  A  +      KD V+W ++I 
Sbjct: 506 DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 565

Query: 396 GYTQHGYYKEGVETFK-MVKRENELDSVTFILLLSIFSQLANIDQGRGIHCDVIKFGFEA 455
           GYTQ+ +  + + TF+ M+ R    D V     +S  + L  + +G+ IH      GF +
Sbjct: 566 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS 625

Query: 456 ELVIGNALLDMYAKCGGMDDLLRVFAYMRAHDIISWNTLIASSVHFDDCSIGFQAISRMR 515
           +L   NAL+ +Y++CG +++    F    A D I+WN L++      +     +   RM 
Sbjct: 626 DLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 685

Query: 516 TEGLIPDEATILGILPMCSLLAARRQGKEIHGCIFKLGFESDVPTGNALIEMYSKCGSLE 575
            EG+  +  T    +   S  A  +QGK++H  I K G++S+    NALI MY+KCGS+ 
Sbjct: 686 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 745

Query: 576 NCTKVFNYMKEKDVVTWTALISAF 598
           +  K F  +  K+ V+W A+I+A+
Sbjct: 746 DAEKQFLEVSTKNEVSWNAIINAY 768

BLAST of MS024962 vs. ExPASy Swiss-Prot
Match: Q9M1V3 (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)

HSP 1 Score: 315.1 bits (806), Expect = 1.8e-84
Identity = 184/582 (31.62%), Postives = 318/582 (54.64%), Query Frame = 0

Query: 23  LLKALSSAKNTSQLRNIHSLIIISGLSLSVVF-SGKLISKYAQLKDPISSVSVFRTVSPT 82
           +L+     +  SQ R +HS I  +  S  + F +GKL+  Y +      +  VF  + P 
Sbjct: 86  VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM-PD 145

Query: 83  SNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPDAYTFPSVINSCARLLDLNMGHVV 142
              + WN++I A   NG    AL  Y  MR + +     +FP+++ +CA+L D+  G  +
Sbjct: 146 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 205

Query: 143 HEHVLEMGFGSDLYIGNALIDMYSRFGDLDKARYVFEEMSDR-DSVSWNSLISGYCSNGF 202
           H  ++++G+ S  +I NAL+ MY++  DL  AR +F+   ++ D+V WNS++S Y ++G 
Sbjct: 206 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK 265

Query: 203 WEEALEMYHKSRMIGMVPDRFTMSSVLLACGCLMAVKEGLNVHGAIEKIGI-GRDVIIGN 262
             E LE++ +  M G  P+ +T+ S L AC      K G  +H ++ K      ++ + N
Sbjct: 266 SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCN 325

Query: 263 GLLSMYFKFERPREAGQVFGEMDVKDSVTWNTMICGYSQLGQYEESVKLFMEMIDE-FTP 322
            L++MY +  +  +A ++  +M+  D VTWN++I GY Q   Y+E+++ F +MI      
Sbjct: 326 ALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS 385

Query: 323 DLLSVTSTIRACGHLGDLQVGKYVHNYLIGSRYDCDTVACNILIDMYAKCGDLLAAQRVF 382
           D +S+TS I A G L +L  G  +H Y+I   +D +    N LIDMY+KC       R F
Sbjct: 386 DEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF 445

Query: 383 DTMKCKDSVTWNSLINGYTQHGYYKEGVETFK-MVKRENELDSVTFILLLSIFSQLANID 442
             M  KD ++W ++I GY Q+  + E +E F+ + K+  E+D +    +L   S L ++ 
Sbjct: 446 LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSML 505

Query: 443 QGRGIHCDVIKFGFEAELVIGNALLDMYAKCGGMDDLLRVFAYMRAHDIISWNTLIASSV 502
             + IHC +++ G   + VI N L+D+Y KC  M    RVF  ++  D++SW ++I+SS 
Sbjct: 506 IVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSA 565

Query: 503 HFDDCSIGFQAISRMRTEGLIPDEATILGILPMCSLLAARRQGKEIHGCIFKLGFESDVP 562
              + S   +   RM   GL  D   +L IL   + L+A  +G+EIH  + + GF  +  
Sbjct: 566 LNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGS 625

Query: 563 TGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFGI 600
              A+++MY+ CG L++   VF+ ++ K ++ +T++I+A+G+
Sbjct: 626 IAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGM 665

BLAST of MS024962 vs. ExPASy Swiss-Prot
Match: O80647 (Pentatricopeptide repeat-containing protein At2g39620 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E33 PE=3 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 5.0e-82
Identity = 181/581 (31.15%), Postives = 304/581 (52.32%), Query Frame = 0

Query: 21  SSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKLISKYAQLKDPISSVSVFRTVSP 80
           ++LL  L   KN   L  +H  +I+SGL        +LI+ Y+  +    S  +F +V  
Sbjct: 6   TNLLLMLRECKNFRCLLQVHGSLIVSGLKP----HNQLINAYSLFQRQDLSRVIFDSVR- 65

Query: 81  TSNVYQWNSIIRASTHNGLFTQALGYYTEMREKK-LQPDAYTFPSVINSCARLLDLNMGH 140
              V  WNS+IR  T  GL  +ALG++  M E+K + PD Y+F   + +CA  +D   G 
Sbjct: 66  DPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGL 125

Query: 141 VVHEHVLEMGFGSDLYIGNALIDMYSRFGDLDKARYVFEEMSDRDSVSWNSLISGYCSNG 200
            +H+ + EMG  SD+YIG AL++MY +  DL  AR VF++M  +D V+WN+++SG   NG
Sbjct: 126 RIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 185

Query: 201 FWEEALEMYHKSRMIGMVPDRFTMSSVLLACGCLMAVKEGLNVHGAIEKIGIGRDVIIGN 260
               AL ++H  R   +  D  ++ +++ A   L        +HG + K G        +
Sbjct: 186 CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF--IFAFSS 245

Query: 261 GLLSMYFKFERPREAGQVFGEMDVKDSVTWNTMICGYSQLGQYEESVKLFMEMID-EFTP 320
           GL+ MY        A  VF E+  KD  +W TM+  Y+  G +EE ++LF  M + +   
Sbjct: 246 GLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRM 305

Query: 321 DLLSVTSTIRACGHLGDLQVGKYVHNYLIGSRYDCDTVACNILIDMYAKCGDLLAAQRVF 380
           + ++  S ++A  ++GDL  G  +H+Y +      D      L+ MY+KCG+L  A+++F
Sbjct: 306 NKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLF 365

Query: 381 DTMKCKDSVTWNSLINGYTQHGYYKEGVETFK-MVKRENELDSVTFILLLSIFSQLANID 440
             ++ +D V+W+++I  Y Q G + E +  F+ M++   + ++VT   +L   + +A   
Sbjct: 366 INIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASR 425

Query: 441 QGRGIHCDVIKFGFEAELVIGNALLDMYAKCGGMDDLLRVFAYMRAHDIISWNTLIASSV 500
            G+ IHC  IK   E+EL    A++ MYAKCG     L+ F  +   D +++N L     
Sbjct: 426 LGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYT 485

Query: 501 HFDDCSIGFQAISRMRTEGLIPDEATILGILPMCSLLAARRQGKEIHGCIFKLGFESDVP 560
              D +  F     M+  G+ PD  T++G+L  C+  +   +G  ++G I K GF+S+  
Sbjct: 486 QIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECH 545

Query: 561 TGNALIEMYSKCGSLENCTKVFNYMK-EKDVVTWTALISAF 598
             +ALI M++KC +L     +F+    EK  V+W  +++ +
Sbjct: 546 VAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGY 579

BLAST of MS024962 vs. ExPASy TrEMBL
Match: A0A6J1D0T4 (pentatricopeptide repeat-containing protein At3g03580 OS=Momordica charantia OX=3673 GN=LOC111016001 PE=3 SV=1)

HSP 1 Score: 1184.9 bits (3064), Expect = 0.0e+00
Identity = 581/599 (96.99%), Postives = 592/599 (98.83%), Query Frame = 0

Query: 1   MKPPRFCFNDSPETAQEVLRSSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKLIS 60
           MKPPRFCFNDSPETAQEVLRSSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKLIS
Sbjct: 1   MKPPRFCFNDSPETAQEVLRSSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKLIS 60

Query: 61  KYAQLKDPISSVSVFRTVSPTSNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPDAY 120
           KYAQLKDPISSVSVFRTVSPTSNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPDAY
Sbjct: 61  KYAQLKDPISSVSVFRTVSPTSNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPDAY 120

Query: 121 TFPSVINSCARLLDLNMGHVVHEHVLEMGFGSDLYIGNALIDMYSRFGDLDKARYVFEEM 180
           TFPSVINSCARLLDLNMGHVVHEHV+EMGFGSDLYIGNALIDMYSRFGDLDKARYVFEEM
Sbjct: 121 TFPSVINSCARLLDLNMGHVVHEHVMEMGFGSDLYIGNALIDMYSRFGDLDKARYVFEEM 180

Query: 181 SDRDSVSWNSLISGYCSNGFWEEALEMYHKSRMIGMVPDRFTMSSVLLACGCLMAVKEGL 240
           SDRDSVSWNSLISGYCSNGFWEEALEMYHKSRMIGMVPDRFT +SVLLACG LMAVKEGL
Sbjct: 181 SDRDSVSWNSLISGYCSNGFWEEALEMYHKSRMIGMVPDRFT-TSVLLACGSLMAVKEGL 240

Query: 241 NVHGAIEKIGIGRDVIIGNGLLSMYFKFERPREAGQVFGEMDVKDSVTWNTMICGYSQLG 300
           NVHGAIEKIGIGRDVIIGNGLLSMYFKFERPREAGQVFGEMDVKDSV+WNTMICGYSQLG
Sbjct: 241 NVHGAIEKIGIGRDVIIGNGLLSMYFKFERPREAGQVFGEMDVKDSVSWNTMICGYSQLG 300

Query: 301 QYEESVKLFMEMIDEFTPDLLSVTSTIRACGHLGDLQVGKYVHNYLIGSRYDCDTVACNI 360
           QYEESVKLFMEMID+FTPDLLSVTSTIRACGHL DLQVGKYVHNYLIGS Y+CDTVACNI
Sbjct: 301 QYEESVKLFMEMIDKFTPDLLSVTSTIRACGHLADLQVGKYVHNYLIGSGYECDTVACNI 360

Query: 361 LIDMYAKCGDLLAAQRVFDTMKCKDSVTWNSLINGYTQHGYYKEGVETFKMVKRENELDS 420
           LIDMYAKCGDLLAAQ+VFD MKCKDSVTWNSLINGYTQHGYYKEGVETFKM+KRENELDS
Sbjct: 361 LIDMYAKCGDLLAAQQVFDAMKCKDSVTWNSLINGYTQHGYYKEGVETFKMMKRENELDS 420

Query: 421 VTFILLLSIFSQLANIDQGRGIHCDVIKFGFEAELVIGNALLDMYAKCGGMDDLLRVFAY 480
           VTF+LLLS+FSQLANIDQGRGIHCD+IK GFEAELVIGNALLDMYAKCGGMDDLLRVFAY
Sbjct: 421 VTFVLLLSMFSQLANIDQGRGIHCDMIKLGFEAELVIGNALLDMYAKCGGMDDLLRVFAY 480

Query: 481 MRAHDIISWNTLIASSVHFDDCSIGFQAISRMRTEGLIPDEATILGILPMCSLLAARRQG 540
           MRAHDIISWNTLIASSVHFDDCSIGFQAI RMRTEGLIPDEATILGILPMCSLLAARRQG
Sbjct: 481 MRAHDIISWNTLIASSVHFDDCSIGFQAIIRMRTEGLIPDEATILGILPMCSLLAARRQG 540

Query: 541 KEIHGCIFKLGFESDVPTGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFGI 600
           KEIHGCIFKLGFESDVPTGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG+
Sbjct: 541 KEIHGCIFKLGFESDVPTGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFGM 598

BLAST of MS024962 vs. ExPASy TrEMBL
Match: A0A6J1GDL7 (pentatricopeptide repeat-containing protein At3g03580 OS=Cucurbita moschata OX=3662 GN=LOC111453213 PE=3 SV=1)

HSP 1 Score: 1053.1 bits (2722), Expect = 4.5e-304
Identity = 516/601 (85.86%), Postives = 550/601 (91.51%), Query Frame = 0

Query: 1   MKPPRF--CFNDSPETAQEVLRSSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKL 60
           MKPP+F   FN SPETAQE+LRSSLLKALSSAKNTSQLR +HS IIISGL LSVVFSGKL
Sbjct: 1   MKPPKFRSNFNSSPETAQELLRSSLLKALSSAKNTSQLRAVHSWIIISGLGLSVVFSGKL 60

Query: 61  ISKYAQLKDPISSVSVFRTVSPTSNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPD 120
           ISKYAQLKDPISSVSVFRTVSPT NVYQWNSIIRA T NGLFTQALGYYTEMRE KLQPD
Sbjct: 61  ISKYAQLKDPISSVSVFRTVSPTRNVYQWNSIIRALTRNGLFTQALGYYTEMRETKLQPD 120

Query: 121 AYTFPSVINSCARLLDLNMGHVVHEHVLEMGFGSDLYIGNALIDMYSRFGDLDKARYVFE 180
           AYTFPSVINSCARLLDL MG VVHEHV EMGF SDLYIGNALIDMY RFGDL+ ARY+F+
Sbjct: 121 AYTFPSVINSCARLLDLKMGRVVHEHVEEMGFESDLYIGNALIDMYCRFGDLENARYMFD 180

Query: 181 EMSDRDSVSWNSLISGYCSNGFWEEALEMYHKSRMIGMVPDRFTMSSVLLACGCLMAVKE 240
           EMSDRDSVSWNSLISGYCSNGFWEEAL+MYHKSR+IGMVPD FTMSSVLLACG L AV+E
Sbjct: 181 EMSDRDSVSWNSLISGYCSNGFWEEALDMYHKSRIIGMVPDCFTMSSVLLACGSLTAVEE 240

Query: 241 GLNVHGAIEKIGIGRDVIIGNGLLSMYFKFERPREAGQVFGEMDVKDSVTWNTMICGYSQ 300
           GL +HG IEKIGIG D++ GNGLLSMYFKFERPRE G+VF EM  KDSVTWNTMICGYSQ
Sbjct: 241 GLKIHGVIEKIGIGGDIVTGNGLLSMYFKFERPRETGRVFTEMAAKDSVTWNTMICGYSQ 300

Query: 301 LGQYEESVKLFMEMIDEFTPDLLSVTSTIRACGHLGDLQVGKYVHNYLIGSRYDCDTVAC 360
           LG +EESVKLFM MIDEF PD+LSVTSTIRACGHLGDL++GKYVH YLIG  Y+CDTVAC
Sbjct: 301 LGWHEESVKLFMAMIDEFAPDVLSVTSTIRACGHLGDLRIGKYVHKYLIGRGYECDTVAC 360

Query: 361 NILIDMYAKCGDLLAAQRVFDTMKCKDSVTWNSLINGYTQHGYYKEGVETFKMVKRENEL 420
           NILIDMYAKCGDLLAAQ VFDTM  KDSVTWNSLINGYTQ GYYKEG+E FK++KRE++ 
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTMNRKDSVTWNSLINGYTQRGYYKEGMENFKIMKRESKP 420

Query: 421 DSVTFILLLSIFSQLANIDQGRGIHCDVIKFGFEAELVIGNALLDMYAKCGGMDDLLRVF 480
           DSVTF+LLLS+ SQLA+I QGRGIHCDVIK GFE EL+IGNALLDMYAKCGGMDDLL+ F
Sbjct: 421 DSVTFVLLLSLCSQLADISQGRGIHCDVIKSGFEDELIIGNALLDMYAKCGGMDDLLKAF 480

Query: 481 AYMRAHDIISWNTLIASSVHFDDCSIGFQAISRMRTEGLIPDEATILGILPMCSLLAARR 540
           +YMRA DIISWNTLIASSVHFDDC++G+QAIS MRTEGL+PDEATILGILPMCSLLAARR
Sbjct: 481 SYMRARDIISWNTLIASSVHFDDCTVGYQAISEMRTEGLMPDEATILGILPMCSLLAARR 540

Query: 541 QGKEIHGCIFKLGFESDVPTGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600
           QGKEIH CIFKLG E DVP GNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG
Sbjct: 541 QGKEIHCCIFKLGLELDVPIGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600

BLAST of MS024962 vs. ExPASy TrEMBL
Match: A0A6J1IH14 (pentatricopeptide repeat-containing protein At3g03580 OS=Cucurbita maxima OX=3661 GN=LOC111475085 PE=3 SV=1)

HSP 1 Score: 1044.3 bits (2699), Expect = 2.1e-301
Identity = 513/601 (85.36%), Postives = 545/601 (90.68%), Query Frame = 0

Query: 1   MKPPRFC--FNDSPETAQEVLRSSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKL 60
           MKPP+FC  FN SPETAQEVLRSSLLKALSSAKNTSQLR +HS IIISGL LSVVFSGKL
Sbjct: 1   MKPPKFCSNFNSSPETAQEVLRSSLLKALSSAKNTSQLRALHSWIIISGLGLSVVFSGKL 60

Query: 61  ISKYAQLKDPISSVSVFRTVSPTSNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPD 120
           ISKYAQLKDPISSVSVFRTVSPT NVYQWNSIIRA T NGLFTQALGYYTEMRE KLQPD
Sbjct: 61  ISKYAQLKDPISSVSVFRTVSPTRNVYQWNSIIRALTRNGLFTQALGYYTEMRETKLQPD 120

Query: 121 AYTFPSVINSCARLLDLNMGHVVHEHVLEMGFGSDLYIGNALIDMYSRFGDLDKARYVFE 180
           AYTFPSVINSCARLLDL MG VVHEHV EMG  SDLYIGNALIDMY RFGDL+KARY+F+
Sbjct: 121 AYTFPSVINSCARLLDLKMGRVVHEHVEEMGIESDLYIGNALIDMYCRFGDLEKARYMFD 180

Query: 181 EMSDRDSVSWNSLISGYCSNGFWEEALEMYHKSRMIGMVPDRFTMSSVLLACGCLMAVKE 240
           EMSDRDSVSWNSLISGYCSNGFWEEAL+MYHKSRM G+VPD FTMSSVLLACG L AV+E
Sbjct: 181 EMSDRDSVSWNSLISGYCSNGFWEEALDMYHKSRMSGIVPDCFTMSSVLLACGSLTAVEE 240

Query: 241 GLNVHGAIEKIGIGRDVIIGNGLLSMYFKFERPREAGQVFGEMDVKDSVTWNTMICGYSQ 300
           GL +HG IEKIGIG D++ GNGLLSMYFKFER RE G+VF EM  KDSVTWNTMI GYSQ
Sbjct: 241 GLKIHGVIEKIGIGGDIVTGNGLLSMYFKFERLRETGRVFAEMAAKDSVTWNTMIYGYSQ 300

Query: 301 LGQYEESVKLFMEMIDEFTPDLLSVTSTIRACGHLGDLQVGKYVHNYLIGSRYDCDTVAC 360
           LG +EESVKLFM MIDEF PD+LSVTSTIRACGHLGDL++GKYVH YLIG  Y+CDTVAC
Sbjct: 301 LGWHEESVKLFMAMIDEFAPDVLSVTSTIRACGHLGDLRIGKYVHKYLIGRGYECDTVAC 360

Query: 361 NILIDMYAKCGDLLAAQRVFDTMKCKDSVTWNSLINGYTQHGYYKEGVETFKMVKRENEL 420
           NILIDMYAKCGDLLAAQ VFDTM CKDSVTWNSLINGY Q  YYKEGVE FKM+KRE++ 
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTMNCKDSVTWNSLINGYIQRVYYKEGVENFKMMKRESKP 420

Query: 421 DSVTFILLLSIFSQLANIDQGRGIHCDVIKFGFEAELVIGNALLDMYAKCGGMDDLLRVF 480
           DSVTF+LLLS+ SQLA+I QGRGIHCDVIK GFE EL+IGNALLDMYAKCGGMDDL + F
Sbjct: 421 DSVTFVLLLSLCSQLADISQGRGIHCDVIKSGFEDELIIGNALLDMYAKCGGMDDLSKAF 480

Query: 481 AYMRAHDIISWNTLIASSVHFDDCSIGFQAISRMRTEGLIPDEATILGILPMCSLLAARR 540
           +YMRA DIISWNTLIASSVHFDDC++GF+AI+ MRTEGL+PDEATILGILPMCSLLAARR
Sbjct: 481 SYMRARDIISWNTLIASSVHFDDCTVGFRAINEMRTEGLMPDEATILGILPMCSLLAARR 540

Query: 541 QGKEIHGCIFKLGFESDVPTGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600
           QGKEIH CIF LG E DVP GNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG
Sbjct: 541 QGKEIHCCIFNLGLELDVPIGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600

BLAST of MS024962 vs. ExPASy TrEMBL
Match: A0A0A0L4F4 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126920 PE=3 SV=1)

HSP 1 Score: 1032.7 bits (2669), Expect = 6.3e-298
Identity = 500/601 (83.19%), Postives = 550/601 (91.51%), Query Frame = 0

Query: 1   MKPPRFC--FNDSPETAQEVLRSSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKL 60
           MKPP+FC  FN++PE +QE LRSSLLK LSSAKNT QLR +HSLII SGLSLSV+FSGKL
Sbjct: 1   MKPPKFCSNFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKL 60

Query: 61  ISKYAQLKDPISSVSVFRTVSPTSNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPD 120
           ISKYAQ+KDPISSVSVFR++SPT+NVY WNSIIRA THNGLFTQALGYYTEMREKKLQPD
Sbjct: 61  ISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPD 120

Query: 121 AYTFPSVINSCARLLDLNMGHVVHEHVLEMGFGSDLYIGNALIDMYSRFGDLDKARYVFE 180
           A+TFPSVINSCAR+LDL +G +VHEH +EMGF SDLYIGNALIDMYSRF DLD ARYVFE
Sbjct: 121 AFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFE 180

Query: 181 EMSDRDSVSWNSLISGYCSNGFWEEALEMYHKSRMIGMVPDRFTMSSVLLACGCLMAVKE 240
           EMS+RDSVSWNSLISGYCSNGFWE+AL+MYHK RM GMVPD FTMSSVLLACG LMAVKE
Sbjct: 181 EMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKE 240

Query: 241 GLNVHGAIEKIGIGRDVIIGNGLLSMYFKFERPREAGQVFGEMDVKDSVTWNTMICGYSQ 300
           G+ VHG IEKIGI  DVIIGNGLLSMYFKFER REA +VF +M VKDSVTWNTMICGY+Q
Sbjct: 241 GVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQ 300

Query: 301 LGQYEESVKLFMEMIDEFTPDLLSVTSTIRACGHLGDLQVGKYVHNYLIGSRYDCDTVAC 360
           LG++E SVKLFM+MID F PD+LS+TSTIRACG  GDLQVGK+VH YLIGS ++CDTVAC
Sbjct: 301 LGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVAC 360

Query: 361 NILIDMYAKCGDLLAAQRVFDTMKCKDSVTWNSLINGYTQHGYYKEGVETFKMVKRENEL 420
           NILIDMYAKCGDLLAAQ VFDT KCKDSVTWNSLINGYTQ GYYKEG+E+FKM+K E + 
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKP 420

Query: 421 DSVTFILLLSIFSQLANIDQGRGIHCDVIKFGFEAELVIGNALLDMYAKCGGMDDLLRVF 480
           DSVTF+LLLSIFSQLA+I+QGRGIHCDVIKFGFEAEL+IGN+LLD+YAKCG MDDLL+VF
Sbjct: 421 DSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVF 480

Query: 481 AYMRAHDIISWNTLIASSVHFDDCSIGFQAISRMRTEGLIPDEATILGILPMCSLLAARR 540
           +YM AHDIISWNT+IASSVHFDDC++GFQ I+ MRTEGL+PDEAT+LGILPMCSLLA RR
Sbjct: 481 SYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRR 540

Query: 541 QGKEIHGCIFKLGFESDVPTGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600
           QGKEIHG IFK GFES+VP GNALIEMYSKCGSLENC KVF YMKEKDVVTWTALISAFG
Sbjct: 541 QGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFG 600

BLAST of MS024962 vs. ExPASy TrEMBL
Match: A0A5A7TZN0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G002920 PE=3 SV=1)

HSP 1 Score: 1028.9 bits (2659), Expect = 9.2e-297
Identity = 506/621 (81.48%), Postives = 559/621 (90.02%), Query Frame = 0

Query: 1   MKPPRFC--FNDSPETAQEVLRSSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKL 60
           MKPP+FC  FN++PE +QE+LRSSLLK LSSAKNT QLR +HSLII SGLSLSV+FSGKL
Sbjct: 1   MKPPKFCSNFNNTPEPSQELLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKL 60

Query: 61  ISKYAQLKDPISSVSVFRTVSPTSNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPD 120
           ISKY+Q+KDPISSVSVFR++SPT+NVY WNSIIRA THNGLFTQALGYY EMREKKLQPD
Sbjct: 61  ISKYSQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYHEMREKKLQPD 120

Query: 121 AYTFPSVINSCARLLDLNMGHVVHEHVLEMGFGSDLYIGNALIDMYSRFGDLDKARYVFE 180
           A+TFPSVINSCARLLDL +G +VH+HV+EMGF SDLYIGNALIDMYSRF DLD ARYVFE
Sbjct: 121 AFTFPSVINSCARLLDLELGCIVHQHVMEMGFESDLYIGNALIDMYSRFVDLDNARYVFE 180

Query: 181 EMSDRDSVSWNSLISGYCSNGFWEEALEMYHKSRMIGMVPDRFTMSSVLLACGCLMAVKE 240
           EMS+RDSVSWNSLISGYCSNGFWEEAL+MYHK RM GMVPD FTMSSVLLACG LMAVKE
Sbjct: 181 EMSNRDSVSWNSLISGYCSNGFWEEALDMYHKFRMTGMVPDYFTMSSVLLACGSLMAVKE 240

Query: 241 GLNVHGAIEKIGIGRDVIIGNGLLSMYFKFERPREAGQVFGEMDVKDSVTWNTMICGYSQ 300
           G+ VHG IEKIGI  DVIIGNGLLSMYFKFER REA  +F EM VKDSVTWNTMICGY+Q
Sbjct: 241 GVAVHGVIEKIGITGDVIIGNGLLSMYFKFERLREARWIFSEMAVKDSVTWNTMICGYAQ 300

Query: 301 LGQYEESVKLFMEMIDEFTPDLLSVTSTIRACGHLGDLQVGKYVHNYLIGSRYDCDTVAC 360
           LG++EESVKLFMEMID F PD+LS+TSTIRACG  G+LQ+GK+VH YLIGS ++CDTVA 
Sbjct: 301 LGRHEESVKLFMEMIDGFIPDMLSITSTIRACGQSGNLQIGKFVHKYLIGSGFECDTVAN 360

Query: 361 NILIDMYAKCGDLLAAQRVFDTMKCKDSVTWNSLINGYTQHGYYKEGVETFKMVKRENEL 420
           NILIDMYAKCGDLLAAQ VFDT KCKDSVTWNSLINGYTQ GYYKEG+E+FKM+K E++ 
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMESKP 420

Query: 421 DSVTFILLLSIFSQLANIDQGRGIHCDVIKFGFEAELVIGNALLDMYAKCGGMDDLLRVF 480
           DSVTF+LLLSIFSQLA+I+QGRGI CDVIKFGFEAEL+IGN+LLDMYAKCG MDDLL+VF
Sbjct: 421 DSVTFVLLLSIFSQLADINQGRGIQCDVIKFGFEAELIIGNSLLDMYAKCGEMDDLLKVF 480

Query: 481 AYMRAHDIISWNTLIASSVHFDDCSIGFQAISRMRTEGLIPDEATILGILPMCSLLAARR 540
           +YM AHD ISWNT+IASSVHFDDC++GFQ I+ MRTEGL+PDEAT+LGILPMCSLLA RR
Sbjct: 481 SYMSAHDNISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRR 540

Query: 541 QGKEIHGCIFKLGFESDVPTGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 600
           QGKEIHG IFKLGFES+VP GNALIEMYSKCGSLENCTKVFNYM+EKDVVTWTALISAFG
Sbjct: 541 QGKEIHGYIFKLGFESNVPIGNALIEMYSKCGSLENCTKVFNYMEEKDVVTWTALISAFG 600

Query: 601 I---SWRTLSAF-SFSLEGQF 616
           +     + L AF    L G F
Sbjct: 601 MYGEGKKALKAFQDMELSGVF 621

BLAST of MS024962 vs. TAIR 10
Match: AT3G03580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 652.9 bits (1683), Expect = 2.6e-187
Identity = 307/576 (53.30%), Postives = 430/576 (74.65%), Query Frame = 0

Query: 25  KALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKLISKYAQLKDPISSVSVFRTVSPTSNV 84
           +ALSS+ N ++LR IH+L+I  GL  S  FSGKLI KY+  ++P SS+SVFR VSP  NV
Sbjct: 12  RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71

Query: 85  YQWNSIIRASTHNGLFTQALGYYTEMREKKLQPDAYTFPSVINSCARLLDLNMGHVVHEH 144
           Y WNSIIRA + NGLF +AL +Y ++RE K+ PD YTFPSVI +CA L D  MG +V+E 
Sbjct: 72  YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131

Query: 145 VLEMGFGSDLYIGNALIDMYSRFGDLDKARYVFEEMSDRDSVSWNSLISGYCSNGFWEEA 204
           +L+MGF SDL++GNAL+DMYSR G L +AR VF+EM  RD VSWNSLISGY S+G++EEA
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191

Query: 205 LEMYHKSRMIGMVPDRFTMSSVLLACGCLMAVKEGLNVHGAIEKIGIGRDVIIGNGLLSM 264
           LE+YH+ +   +VPD FT+SSVL A G L+ VK+G  +HG   K G+   V++ NGL++M
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251

Query: 265 YFKFERPREAGQVFGEMDVKDSVTWNTMICGYSQLGQYEESVKLFMEMIDEFTPDLLSVT 324
           Y KF RP +A +VF EMDV+DSV++NTMICGY +L   EESV++F+E +D+F PDLL+V+
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVS 311

Query: 325 STIRACGHLGDLQVGKYVHNYLIGSRYDCDTVACNILIDMYAKCGDLLAAQRVFDTMKCK 384
           S +RACGHL DL + KY++NY++ + +  ++   NILID+YAKCGD++ A+ VF++M+CK
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK 371

Query: 385 DSVTWNSLINGYTQHGYYKEGVETFKMVK-RENELDSVTFILLLSIFSQLANIDQGRGIH 444
           D+V+WNS+I+GY Q G   E ++ FKM+   E + D +T+++L+S+ ++LA++  G+G+H
Sbjct: 372 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLH 431

Query: 445 CDVIKFGFEAELVIGNALLDMYAKCGGMDDLLRVFAYMRAHDIISWNTLIASSVHFDDCS 504
            + IK G   +L + NAL+DMYAKCG + D L++F+ M   D ++WNT+I++ V F D +
Sbjct: 432 SNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFA 491

Query: 505 IGFQAISRMRTEGLIPDEATILGILPMCSLLAARRQGKEIHGCIFKLGFESDVPTGNALI 564
            G Q  ++MR   ++PD AT L  LPMC+ LAA+R GKEIH C+ + G+ES++  GNALI
Sbjct: 492 TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALI 551

Query: 565 EMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFGI 600
           EMYSKCG LEN ++VF  M  +DVVTWT +I A+G+
Sbjct: 552 EMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGM 587

BLAST of MS024962 vs. TAIR 10
Match: AT4G21300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 327.0 bits (837), Expect = 3.3e-89
Identity = 183/581 (31.50%), Postives = 300/581 (51.64%), Query Frame = 0

Query: 21  SSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKLISKYAQLKDPISSVSVF-RTVS 80
           S LL+A S+     Q + +H+ +I++ +S       +++  YA          +F R   
Sbjct: 39  SLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDL 98

Query: 81  PTSNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPDAYTFPSVINSCARLLDLNMGH 140
             S++  WNSII +   NGL  QAL +Y +M    + PD  TFP ++ +C  L +     
Sbjct: 99  RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGID 158

Query: 141 VVHEHVLEMGFGSDLYIGNALIDMYSRFGDLDKARYVFEEMSDRDSVSWNSLISGYCSNG 200
            + + V  +G   + ++ ++LI  Y  +G +D    +F+ +  +D V WN +++GY   G
Sbjct: 159 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 218

Query: 201 FWEEALEMYHKSRMIGMVPDRFTMSSVLLACGCLMAVKEGLNVHGAIEKIGIGRDVIIGN 260
             +  ++ +   RM  + P+  T   VL  C   + +  G+ +HG +   G+  +  I N
Sbjct: 219 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 278

Query: 261 GLLSMYFKFERPREAGQVFGEMDVKDSVTWNTMICGYSQLGQYEESVKLFMEMIDE-FTP 320
            LLSMY K  R  +A ++F  M   D+VTWN MI GY Q G  EES+  F EMI     P
Sbjct: 279 SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 338

Query: 321 DLLSVTSTIRACGHLGDLQVGKYVHNYLIGSRYDCDTVACNILIDMYAKCGDLLAAQRVF 380
           D ++ +S + +     +L+  K +H Y++      D    + LID Y KC  +  AQ +F
Sbjct: 339 DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF 398

Query: 381 DTMKCKDSVTWNSLINGYTQHGYYKEGVETFK-MVKRENELDSVTFILLLSIFSQLANID 440
                 D V + ++I+GY  +G Y + +E F+ +VK +   + +T + +L +   L  + 
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALK 458

Query: 441 QGRGIHCDVIKFGFEAELVIGNALLDMYAKCGGMDDLLRVFAYMRAHDIISWNTLIASSV 500
            GR +H  +IK GF+    IG A++DMYAKCG M+    +F  +   DI+SWN++I    
Sbjct: 459 LGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCA 518

Query: 501 HFDDCSIGFQAISRMRTEGLIPDEATILGILPMCSLLAARRQGKEIHGCIFKLGFESDVP 560
             D+ S       +M   G+  D  +I   L  C+ L +   GK IHG + K    SDV 
Sbjct: 519 QSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVY 578

Query: 561 TGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFG 599
           + + LI+MY+KCG+L+    VF  MKEK++V+W ++I+A G
Sbjct: 579 SESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACG 619

BLAST of MS024962 vs. TAIR 10
Match: AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 323.2 bits (827), Expect = 4.8e-88
Identity = 175/564 (31.03%), Postives = 300/564 (53.19%), Query Frame = 0

Query: 36  LRNIHSLIIISGLSLSVVFSGKLISKYAQLKDPISSVSVFRTVSPTSNVYQWNSIIRAST 95
           +  IH+ I+  GL  S V    LI  Y++      +  VF  +    +   W ++I   +
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR-LKDHSSWVAMISGLS 265

Query: 96  HNGLFTQALGYYTEMREKKLQPDAYTFPSVINSCARLLDLNMGHVVHEHVLEMGFGSDLY 155
            N    +A+  + +M    + P  Y F SV+++C ++  L +G  +H  VL++GF SD Y
Sbjct: 266 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 325

Query: 156 IGNALIDMYSRFGDLDKARYVFEEMSDRDSVSWNSLISGYCSNGFWEEALEMYHKSRMIG 215
           + NAL+ +Y   G+L  A ++F  MS RD+V++N+LI+G    G+ E+A+E++ +  + G
Sbjct: 326 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG 385

Query: 216 MVPDRFTMSSVLLACGCLMAVKEGLNVHGAIEKIGIGRDVIIGNGLLSMYFKFERPREAG 275
           + PD  T++S+++AC     +  G  +H    K+G   +  I   LL++Y K      A 
Sbjct: 386 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL 445

Query: 276 QVFGEMDVKDSVTWNTMICGYSQLGQYEESVKLFMEM-IDEFTPDLLSVTSTIRACGHLG 335
             F E +V++ V WN M+  Y  L     S ++F +M I+E  P+  +  S ++ C  LG
Sbjct: 446 DYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 505

Query: 336 DLQVGKYVHNYLIGSRYDCDTVACNILIDMYAKCGDLLAAQRVFDTMKCKDSVTWNSLIN 395
           DL++G+ +H+ +I + +  +   C++LIDMYAK G L  A  +      KD V+W ++I 
Sbjct: 506 DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 565

Query: 396 GYTQHGYYKEGVETFK-MVKRENELDSVTFILLLSIFSQLANIDQGRGIHCDVIKFGFEA 455
           GYTQ+ +  + + TF+ M+ R    D V     +S  + L  + +G+ IH      GF +
Sbjct: 566 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS 625

Query: 456 ELVIGNALLDMYAKCGGMDDLLRVFAYMRAHDIISWNTLIASSVHFDDCSIGFQAISRMR 515
           +L   NAL+ +Y++CG +++    F    A D I+WN L++      +     +   RM 
Sbjct: 626 DLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMN 685

Query: 516 TEGLIPDEATILGILPMCSLLAARRQGKEIHGCIFKLGFESDVPTGNALIEMYSKCGSLE 575
            EG+  +  T    +   S  A  +QGK++H  I K G++S+    NALI MY+KCGS+ 
Sbjct: 686 REGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 745

Query: 576 NCTKVFNYMKEKDVVTWTALISAF 598
           +  K F  +  K+ V+W A+I+A+
Sbjct: 746 DAEKQFLEVSTKNEVSWNAIINAY 768

BLAST of MS024962 vs. TAIR 10
Match: AT3G63370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 315.1 bits (806), Expect = 1.3e-85
Identity = 184/582 (31.62%), Postives = 318/582 (54.64%), Query Frame = 0

Query: 23  LLKALSSAKNTSQLRNIHSLIIISGLSLSVVF-SGKLISKYAQLKDPISSVSVFRTVSPT 82
           +L+     +  SQ R +HS I  +  S  + F +GKL+  Y +      +  VF  + P 
Sbjct: 86  VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM-PD 145

Query: 83  SNVYQWNSIIRASTHNGLFTQALGYYTEMREKKLQPDAYTFPSVINSCARLLDLNMGHVV 142
              + WN++I A   NG    AL  Y  MR + +     +FP+++ +CA+L D+  G  +
Sbjct: 146 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 205

Query: 143 HEHVLEMGFGSDLYIGNALIDMYSRFGDLDKARYVFEEMSDR-DSVSWNSLISGYCSNGF 202
           H  ++++G+ S  +I NAL+ MY++  DL  AR +F+   ++ D+V WNS++S Y ++G 
Sbjct: 206 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK 265

Query: 203 WEEALEMYHKSRMIGMVPDRFTMSSVLLACGCLMAVKEGLNVHGAIEKIGI-GRDVIIGN 262
             E LE++ +  M G  P+ +T+ S L AC      K G  +H ++ K      ++ + N
Sbjct: 266 SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCN 325

Query: 263 GLLSMYFKFERPREAGQVFGEMDVKDSVTWNTMICGYSQLGQYEESVKLFMEMIDE-FTP 322
            L++MY +  +  +A ++  +M+  D VTWN++I GY Q   Y+E+++ F +MI      
Sbjct: 326 ALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS 385

Query: 323 DLLSVTSTIRACGHLGDLQVGKYVHNYLIGSRYDCDTVACNILIDMYAKCGDLLAAQRVF 382
           D +S+TS I A G L +L  G  +H Y+I   +D +    N LIDMY+KC       R F
Sbjct: 386 DEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF 445

Query: 383 DTMKCKDSVTWNSLINGYTQHGYYKEGVETFK-MVKRENELDSVTFILLLSIFSQLANID 442
             M  KD ++W ++I GY Q+  + E +E F+ + K+  E+D +    +L   S L ++ 
Sbjct: 446 LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSML 505

Query: 443 QGRGIHCDVIKFGFEAELVIGNALLDMYAKCGGMDDLLRVFAYMRAHDIISWNTLIASSV 502
             + IHC +++ G   + VI N L+D+Y KC  M    RVF  ++  D++SW ++I+SS 
Sbjct: 506 IVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSA 565

Query: 503 HFDDCSIGFQAISRMRTEGLIPDEATILGILPMCSLLAARRQGKEIHGCIFKLGFESDVP 562
              + S   +   RM   GL  D   +L IL   + L+A  +G+EIH  + + GF  +  
Sbjct: 566 LNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGS 625

Query: 563 TGNALIEMYSKCGSLENCTKVFNYMKEKDVVTWTALISAFGI 600
              A+++MY+ CG L++   VF+ ++ K ++ +T++I+A+G+
Sbjct: 626 IAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGM 665

BLAST of MS024962 vs. TAIR 10
Match: AT2G39620.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 307.0 bits (785), Expect = 3.5e-83
Identity = 181/581 (31.15%), Postives = 304/581 (52.32%), Query Frame = 0

Query: 21  SSLLKALSSAKNTSQLRNIHSLIIISGLSLSVVFSGKLISKYAQLKDPISSVSVFRTVSP 80
           ++LL  L   KN   L  +H  +I+SGL        +LI+ Y+  +    S  +F +V  
Sbjct: 6   TNLLLMLRECKNFRCLLQVHGSLIVSGLKP----HNQLINAYSLFQRQDLSRVIFDSVR- 65

Query: 81  TSNVYQWNSIIRASTHNGLFTQALGYYTEMREKK-LQPDAYTFPSVINSCARLLDLNMGH 140
              V  WNS+IR  T  GL  +ALG++  M E+K + PD Y+F   + +CA  +D   G 
Sbjct: 66  DPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGL 125

Query: 141 VVHEHVLEMGFGSDLYIGNALIDMYSRFGDLDKARYVFEEMSDRDSVSWNSLISGYCSNG 200
            +H+ + EMG  SD+YIG AL++MY +  DL  AR VF++M  +D V+WN+++SG   NG
Sbjct: 126 RIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 185

Query: 201 FWEEALEMYHKSRMIGMVPDRFTMSSVLLACGCLMAVKEGLNVHGAIEKIGIGRDVIIGN 260
               AL ++H  R   +  D  ++ +++ A   L        +HG + K G        +
Sbjct: 186 CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF--IFAFSS 245

Query: 261 GLLSMYFKFERPREAGQVFGEMDVKDSVTWNTMICGYSQLGQYEESVKLFMEMID-EFTP 320
           GL+ MY        A  VF E+  KD  +W TM+  Y+  G +EE ++LF  M + +   
Sbjct: 246 GLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRM 305

Query: 321 DLLSVTSTIRACGHLGDLQVGKYVHNYLIGSRYDCDTVACNILIDMYAKCGDLLAAQRVF 380
           + ++  S ++A  ++GDL  G  +H+Y +      D      L+ MY+KCG+L  A+++F
Sbjct: 306 NKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLF 365

Query: 381 DTMKCKDSVTWNSLINGYTQHGYYKEGVETFK-MVKRENELDSVTFILLLSIFSQLANID 440
             ++ +D V+W+++I  Y Q G + E +  F+ M++   + ++VT   +L   + +A   
Sbjct: 366 INIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASR 425

Query: 441 QGRGIHCDVIKFGFEAELVIGNALLDMYAKCGGMDDLLRVFAYMRAHDIISWNTLIASSV 500
            G+ IHC  IK   E+EL    A++ MYAKCG     L+ F  +   D +++N L     
Sbjct: 426 LGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYT 485

Query: 501 HFDDCSIGFQAISRMRTEGLIPDEATILGILPMCSLLAARRQGKEIHGCIFKLGFESDVP 560
              D +  F     M+  G+ PD  T++G+L  C+  +   +G  ++G I K GF+S+  
Sbjct: 486 QIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECH 545

Query: 561 TGNALIEMYSKCGSLENCTKVFNYMK-EKDVVTWTALISAF 598
             +ALI M++KC +L     +F+    EK  V+W  +++ +
Sbjct: 546 VAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGY 579

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022146916.10.0e+0096.99pentatricopeptide repeat-containing protein At3g03580 [Momordica charantia][more]
XP_038897296.15.3e-30785.19pentatricopeptide repeat-containing protein At3g03580 [Benincasa hispida][more]
KAG7028688.11.9e-30485.69Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
KAG6597217.11.9e-30485.69Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_023540929.17.2e-30485.69pentatricopeptide repeat-containing protein At3g03580 [Cucurbita pepo subsp. pep... [more]
Match NameE-valueIdentityDescription
Q9SS603.7e-18653.30Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX... [more]
Q9STE14.7e-8831.50Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX... [more]
Q9SVP76.7e-8731.03Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... [more]
Q9M1V31.8e-8431.62Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... [more]
O806475.0e-8231.15Pentatricopeptide repeat-containing protein At2g39620 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1D0T40.0e+0096.99pentatricopeptide repeat-containing protein At3g03580 OS=Momordica charantia OX=... [more]
A0A6J1GDL74.5e-30485.86pentatricopeptide repeat-containing protein At3g03580 OS=Cucurbita moschata OX=3... [more]
A0A6J1IH142.1e-30185.36pentatricopeptide repeat-containing protein At3g03580 OS=Cucurbita maxima OX=366... [more]
A0A0A0L4F46.3e-29883.19DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G1269... [more]
A0A5A7TZN09.2e-29781.48Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
AT3G03580.12.6e-18753.30Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G21300.13.3e-8931.50Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G13650.14.8e-8831.03Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G63370.11.3e-8531.62Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G39620.13.5e-8331.15Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 284..330
e-value: 5.3E-9
score: 36.1
coord: 83..131
e-value: 7.3E-9
score: 35.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 560..587
e-value: 0.0016
score: 18.5
coord: 387..416
e-value: 1.1E-6
score: 28.5
coord: 186..212
e-value: 1.3E-8
score: 34.5
coord: 356..384
e-value: 2.1E-4
score: 21.3
coord: 459..484
e-value: 0.96
score: 9.8
coord: 158..183
e-value: 8.8E-5
score: 22.5
coord: 259..283
e-value: 0.54
score: 10.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 87..119
e-value: 1.8E-4
score: 19.5
coord: 186..219
e-value: 2.3E-7
score: 28.5
coord: 287..314
e-value: 3.3E-7
score: 28.1
coord: 158..184
e-value: 1.5E-5
score: 22.9
coord: 387..415
e-value: 2.0E-4
score: 19.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 285..315
score: 11.32308
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 83..117
score: 10.095415
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 354..384
score: 9.328124
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 555..589
score: 9.404853
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 184..218
score: 12.934392
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 153..183
score: 9.361008
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 385..415
score: 9.996763
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 236..313
e-value: 9.6E-8
score: 33.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 440..540
e-value: 3.1E-12
score: 48.2
coord: 541..612
e-value: 1.5E-11
score: 46.0
coord: 136..235
e-value: 3.0E-24
score: 87.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 10..135
e-value: 3.8E-12
score: 48.2
coord: 314..439
e-value: 7.6E-24
score: 86.6
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 275..382
coord: 39..284
coord: 382..599
NoneNo IPR availablePANTHERPTHR24015:SF1920REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN, PUTATIVE-RELATEDcoord: 275..382
coord: 39..284
coord: 382..599

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS024962.1MS024962.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding