MS024897 (gene) Bitter gourd (TR) v1

Overview


Name	MS024897
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	chitotriosidase-1-like
Location	scaffold83: 12200 .. 13888 (+)
RNA-Seq Expression	MS024897
Synteny	MS024897

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACTGTGGCGAGTCCTTCTCCTTCAGTTGTGGTGTAATTTTAGTGTGTTTGGCATATTTGTCTTTTAAAGTTCTTAGAGTGCTTAGGGAGGAATATAACTATATAAGTACCTTTTTAAAAATATGTAGTATTTGGTTTAATTTTAACAGTGTTTTAAACCTCATAAATGCTATCCCCTCTTTGTGCTCGTAATATCTTTGGTACAATGCCGTGGGATCCATTTAGTTTAGTTGGAGAGAAATCATAGAACTTTTGCGGATGTCTCCAAATCTTACCACCACCTTGGGATAACATTATTGTTTTAGCTTCCTCTTAGTCTTCTAAGTCTACTTTCTTTTATAACTACAATATCTCGTCCATTTCACTTAACTGGAGCGCTTTTACTTAGCCTCTTTATCTTTTTGTACGCATGTTTCTCACATACTTGAATAAATCGTTCTAGTATCTTTTAAAAAAAATAGTGTTTTAAACCTATTAAAAGTTCTTTTTAAATTTTTAATAATCTAAAAGAGTTTAAAAGTTATTGAAAAAAGAAAAAACAGTTTACACTGGCTTTTAGATGAATCGTTTGATTAATTTTATTCTGAAAGTGTTTGCAAAATAAATACTTCACTTTACAACACTTTTTTCAATTGGCATCCTGAAATACATTTACTTTAGAGGGTTGACAGGAATTTTAGGGAGAGAATTAAACTACGTAAGAAAAAAAGTTTCTGATTCCTGCTATTAAAAAAGAAAGCTTTTAATTATTCTTTCTTCAAATTTTAAAGAAATAATAGGTGAATTTTTTACTTTTCCTACCTGGGAAGCCATCCCTTAAATTGCTGTAAATTCATTAAATATCATGTCAAGTAAAGTTATCACAAGACAATTTTATTTTCCTATCATATAATTGAAATTTTTCAAAATATAAGAAAAATTTTCGTCGCTTTTCCAGCGACGAAAATTGTTTTCGTCGCATTTCCAGCGACGAAAGTTTTTTTCGACGCTGTTTTCGTCGCATTTATTTTCGTCGCTGTTTTGCGACGATAAATACTTTTTGTCGCTGGAAAAGCGACGAAAAAAACTTCGTCGCTAATTAATGTCGCTGAAGACCTTTTTTGTTGTAGTGAATGAAGATTAAAATTCTTCTCAAAAAAAAAAAACAATGAAGATTAAATAAATACCACTTAAACATTAGGAACTCAAACATCTATCCAGCGGTAATTAAACAGCAACCACAGCCACTATTCCTTCATTCTATTTCACTTGTTGCGTTGAATTTATGGAACAGGTATCAAGTCATGGATCAACAGTTTTCCTAATTTGCCTTCCAAAAAGATCGTATTTGGAATTCCTTTCCATGGCTGGGCATGGAAACTCGCAGACGCTCACCGACACGACGTCTTTTCGAAGGCCGAAGGACCAGCCGTAGGAGACAGTATTTCTTCGGACGGCCAAATCGACTACTCCAATATCAAGAAGTTTATAAAAGATAATCAGGCTGAGAATCAAAAAAATGATGGGAGATATGTAATTGGGTACACATATTTTGATACAACTTGGATTGCCTACGAAAATGAAGAAACCAAACCAGAGAAGCTTAGATTGGCAAAGTCCCACCACGTGCTTGGTTACTTTGCTTCCAACATTGCAGCCGATGATGATGTTAATACTCTTGCTAACGCAGCTAAAGCCAATTGGTGA

mRNA sequence

ATGTACTGTGGCGAGTCCTTCTCCTTCAGTTGTGGTGTAATTTTAGTGTGTTTGGCATATTTGTCTTTTAAAGTTCTTAGAGTGCTTAGGGAGGAATATAACTATATAAGTATCAAGTCATGGATCAACAGTTTTCCTAATTTGCCTTCCAAAAAGATCGTATTTGGAATTCCTTTCCATGGCTGGGCATGGAAACTCGCAGACGCTCACCGACACGACGTCTTTTCGAAGGCCGAAGGACCAGCCGTAGGAGACAGTATTTCTTCGGACGGCCAAATCGACTACTCCAATATCAAGAAGTTTATAAAAGATAATCAGGCTGAGAATCAAAAAAATGATGGGAGATATGTAATTGGGTACACATATTTTGATACAACTTGGATTGCCTACGAAAATGAAGAAACCAAACCAGAGAAGCTTAGATTGGCAAAGTCCCACCACGTGCTTGGTTACTTTGCTTCCAACATTGCAGCCGATGATGATGTTAATACTCTTGCTAACGCAGCTAAAGCCAATTGGTGA

Coding sequence (CDS)

ATGTACTGTGGCGAGTCCTTCTCCTTCAGTTGTGGTGTAATTTTAGTGTGTTTGGCATATTTGTCTTTTAAAGTTCTTAGAGTGCTTAGGGAGGAATATAACTATATAAGTATCAAGTCATGGATCAACAGTTTTCCTAATTTGCCTTCCAAAAAGATCGTATTTGGAATTCCTTTCCATGGCTGGGCATGGAAACTCGCAGACGCTCACCGACACGACGTCTTTTCGAAGGCCGAAGGACCAGCCGTAGGAGACAGTATTTCTTCGGACGGCCAAATCGACTACTCCAATATCAAGAAGTTTATAAAAGATAATCAGGCTGAGAATCAAAAAAATGATGGGAGATATGTAATTGGGTACACATATTTTGATACAACTTGGATTGCCTACGAAAATGAAGAAACCAAACCAGAGAAGCTTAGATTGGCAAAGTCCCACCACGTGCTTGGTTACTTTGCTTCCAACATTGCAGCCGATGATGATGTTAATACTCTTGCTAACGCAGCTAAAGCCAATTGGTGA

Protein sequence

MYCGESFSFSCGVILVCLAYLSFKVLRVLREEYNYISIKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKPEKLRLAKSHHVLGYFASNIAADDDVNTLANAAKANW

Homology

[Close]

BLAST of MS024897 vs. NCBI nr
Match: XP_022143191.1 (chitotriosidase-1-like [Momordica charantia])

HSP 1 Score: 231.9 bits (590), Expect = 4.2e-57
Identity = 109/135 (80.74%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 38  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSN 97
           I++WI  +PNLPS++IVFGIPFHGWAWKLAD  +HDVFS+A+G A+G  ISSDGQI YSN
Sbjct: 218 IEAWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSN 277

Query: 98  IKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKPEKLRLAKSHHVLGYFASNIA 157
           IKKFI+ N+A+N KNDG+YVIGYTYFDTTWIAYENE T PEKLRLAKS HVLGYFASNIA
Sbjct: 278 IKKFIESNKAKNLKNDGKYVIGYTYFDTTWIAYENEVTIPEKLRLAKSLHVLGYFASNIA 337

Query: 158 ADDDVNTLANAAKAN 173
           ADDDVNTLANAAKAN
Sbjct: 338 ADDDVNTLANAAKAN 352

[Close]

BLAST of MS024897 vs. NCBI nr
Match: XP_022159350.1 (chitinase-3-like protein 2 [Momordica charantia])

HSP 1 Score: 191.8 bits (486), Expect = 4.9e-45
Identity = 94/148 (63.51%), Postives = 109/148 (73.65%), Query Frame = 0


Query: 27  RVLREEYNYISIKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDS 86
           R+ R       I +WI S  NLP K+IVFGIPFHGWAWKLA+  +HDVFSKA GPA GD 
Sbjct: 212 RMARSLSANFGIDAWIQSLANLPRKQIVFGIPFHGWAWKLANPDKHDVFSKALGPAKGDQ 271

Query: 87  -ISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKPEKLRLAKS 146
            IS +GQID SN+K+FIK N A+  K+D RY I Y Y  TTWIAYE+E T P+K+  AKS
Sbjct: 272 YISQNGQIDXSNVKRFIKQNHAQYVKDDSRYSISYAYAGTTWIAYESEYTIPDKISSAKS 331

Query: 147 HHVLGYFASNIAADDDVNTLANAAKANW 174
             VLGYFA NIAADD+VNTLANAA+ NW
Sbjct: 332 SKVLGYFAWNIAADDEVNTLANAAQTNW 359

[Close]

BLAST of MS024897 vs. NCBI nr
Match: XP_023545402.1 (acidic mammalian chitinase-like, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.0 bits (463), Expect = 2.3e-42
Identity = 83/136 (61.03%), Postives = 105/136 (77.21%), Query Frame = 0


Query: 38  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSN 97
           I+SW  S  NLP KKIVFGIPFHGWAWKL ++H+H +F+KA+G A G+ I   GQI YS+
Sbjct: 214 IRSWAQSLHNLPHKKIVFGIPFHGWAWKLFNSHQHTLFAKADGAATGEYIGPHGQIFYSD 273

Query: 98  IKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKPEKLRLAKSHHVLGYFASNIA 157
           ++KFI+DNQA  +  D  Y++ YTYF+TTWI YE++ T  +K+ LAK+  VLGYFA NIA
Sbjct: 274 VQKFIEDNQAGVEDKDKSYLVAYTYFETTWITYESDYTIADKIALAKADKVLGYFAFNIA 333

Query: 158 ADDDVNTLANAAKANW 174
           ADD  NTLANAAK+NW
Sbjct: 334 ADDASNTLANAAKSNW 349

[Close]

BLAST of MS024897 vs. NCBI nr
Match: XP_023521369.1 (acidic mammalian chitinase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.0 bits (463), Expect = 2.3e-42
Identity = 83/136 (61.03%), Postives = 105/136 (77.21%), Query Frame = 0


Query: 38  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSN 97
           I+SW  S  NLP KKIVFGIPFHGWAWKL ++H+H +F+KA+G A G+ I   GQI YS+
Sbjct: 229 IRSWAQSLHNLPHKKIVFGIPFHGWAWKLFNSHQHTLFAKADGAATGEYIGPHGQIFYSD 288

Query: 98  IKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKPEKLRLAKSHHVLGYFASNIA 157
           ++KFI+DNQA  +  D  Y++ YTYF+TTWI YE++ T  +K+ LAK+  VLGYFA NIA
Sbjct: 289 VQKFIEDNQAGVEDKDKSYLVAYTYFETTWITYESDYTIADKIALAKADKVLGYFAFNIA 348

Query: 158 ADDDVNTLANAAKANW 174
           ADD  NTLANAAK+NW
Sbjct: 349 ADDASNTLANAAKSNW 364

[Close]

BLAST of MS024897 vs. NCBI nr
Match: XP_022142964.1 (oviduct-specific glycoprotein-like [Momordica charantia])

HSP 1 Score: 183.0 bits (463), Expect = 2.3e-42
Identity = 90/148 (60.81%), Postives = 108/148 (72.97%), Query Frame = 0


Query: 27  RVLREEYNYISIKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVG-D 86
           R+ R       I +WI S  NLP K+IVF IPFHGWAWKLA+  ++DVFSKA GPA G  
Sbjct: 143 RIARSLSANFGIDAWIQSLANLPRKQIVFEIPFHGWAWKLANPDKNDVFSKALGPAKGYQ 202

Query: 87  SISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKPEKLRLAKS 146
            IS DGQIDYSN++KFIK+N AE  K+D RY I Y Y  +TWIAYE+E   P+K+  AKS
Sbjct: 203 YISQDGQIDYSNVRKFIKENHAEYVKDDSRYSISYAYAGSTWIAYESEYIIPDKISSAKS 262

Query: 147 HHVLGYFASNIAADDDVNTLANAAKANW 174
             VLGYFA NIAAD++VNTLA+AA+ NW
Sbjct: 263 SKVLGYFAWNIAADNEVNTLASAAQTNW 290

[Close]

BLAST of MS024897 vs. ExPASy Swiss-Prot
Match: O81862 (Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 6.7e-21
Identity = 55/136 (40.44%), Postives = 81/136 (59.56%), Query Frame = 0


Query: 39  KSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNI 98
           +SWI +   LP+KK V G P++G+AW+L +A+ H  ++    P  G +IS DG I Y  I
Sbjct: 240 RSWIQA--GLPAKKAVLGFPYYGYAWRLTNANSHSYYA----PTTGAAISPDGSIGYGQI 299

Query: 99  KKFIKDNQAENQKNDGRYVIG-YTYFDTTWIAYENEETKPEKLRLAKSHHVLGYFASNIA 158
           +KFI DN A    N    V+G Y Y  T WI Y++ ++   K+R AK   +LGYF+ ++ 
Sbjct: 300 RKFIVDNGATTVYNS--TVVGDYCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVG 359

Query: 159 ADDDVNTLANAAKANW 174
           ADD+ + L+ AA   W
Sbjct: 360 ADDN-SGLSRAASQAW 366

[Close]

BLAST of MS024897 vs. ExPASy Swiss-Prot
Match: A0A1B1J8Z2 (Class V chitinase CHIT5 OS=Lotus japonicus OX=34305 GN=CHIT5 PE=1 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 4.9e-16
Identity = 53/136 (38.97%), Postives = 76/136 (55.88%), Query Frame = 0


Query: 38  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSN 97
           I SWI S   +P++K+V G+P +G AW+L D + H V +KA GPAV     +DG +DY  
Sbjct: 268 IGSWIGS--GVPAEKLVMGLPLYGRAWELKDPNDHGVGAKAVGPAV----DTDGSMDYDE 327

Query: 98  IKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKPEKLRLAKSHHVLGYFASNIA 157
           I  F KD  A+    D   V  Y+Y  TTWI Y++  +  +K++ A+S  + GYF   I 
Sbjct: 328 ILVFNKDTGAK-VVYDEVAVSFYSYSGTTWIGYDDGPSITKKVQFARSMGLKGYFFWAIG 387

Query: 158 ADDDVNTLANAAKANW 174
            D D  T++  A   W
Sbjct: 388 KDKDW-TISKQASNAW 395

[Close]

BLAST of MS024897 vs. ExPASy Swiss-Prot
Match: A0A072VEP0 (Class V chitinase CHIT5a OS=Medicago truncatula OX=3880 GN=CHIT5A PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.3e-12
Identity = 46/134 (34.33%), Postives = 72/134 (53.73%), Query Frame = 0


Query: 38  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSN 97
           + SWI S   +  +K+V G+  +G AW+L D + + V ++A GPA      +DG ++Y+ 
Sbjct: 255 LHSWIKS--GVRPEKLVMGLALYGRAWELKDPNVNGVGAEAVGPAT----DTDGSMNYNE 314

Query: 98  IKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKPEKLRLAKSHHVLGYFASNIA 157
           I KF K + A N   D   +  Y+Y  TTWI Y++  +   K+R AKS  + GYF   + 
Sbjct: 315 ILKFNKQSGA-NVVYDKVAISFYSYAGTTWIGYDDGPSITTKVRFAKSLGLKGYFFWALG 374

Query: 158 ADDDVNTLANAAKA 172
            D D +    A+ A
Sbjct: 375 KDKDWSISKQASNA 381

[Close]

BLAST of MS024897 vs. ExPASy Swiss-Prot
Match: A0A072UR65 (Class V chitinase CHIT5b OS=Medicago truncatula OX=3880 GN=CHIT5B PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 8.4e-08
Identity = 34/113 (30.09%), Postives = 59/113 (52.21%), Query Frame = 0


Query: 40  SWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNIK 99
           SWI+S   +  +K+V G+P +G +WKL D + H +      P+VG     +G + Y  + 
Sbjct: 250 SWIHS--GVVPEKLVMGMPLYGKSWKLRDPNVHGI----GAPSVGSGPGVNGLMAYFQVL 309

Query: 100 KFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKPEKLRLAKSHHVLGYF 153
            F +   A+ + +     + Y+Y  +TWI Y+N  T   K+  A++  + GYF
Sbjct: 310 DFNRQKSAKVEYDVDTASV-YSYSGSTWIGYDNPFTVSIKVGFAQALKLRGYF 355

[Close]

BLAST of MS024897 vs. ExPASy TrEMBL
Match: A0A6J1CPI6 (chitotriosidase-1-like OS=Momordica charantia OX=3673 GN=LOC111013120 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 2.1e-57
Identity = 109/135 (80.74%), Postives = 122/135 (90.37%), Query Frame = 0


Query: 38  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSN 97
           I++WI  +PNLPS++IVFGIPFHGWAWKLAD  +HDVFS+A+G A+G  ISSDGQI YSN
Sbjct: 218 IEAWIKCYPNLPSQQIVFGIPFHGWAWKLADRLQHDVFSEADGAAIGHDISSDGQIYYSN 277

Query: 98  IKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKPEKLRLAKSHHVLGYFASNIA 157
           IKKFI+ N+A+N KNDG+YVIGYTYFDTTWIAYENE T PEKLRLAKS HVLGYFASNIA
Sbjct: 278 IKKFIESNKAKNLKNDGKYVIGYTYFDTTWIAYENEVTIPEKLRLAKSLHVLGYFASNIA 337

Query: 158 ADDDVNTLANAAKAN 173
           ADDDVNTLANAAKAN
Sbjct: 338 ADDDVNTLANAAKAN 352

[Close]

BLAST of MS024897 vs. ExPASy TrEMBL
Match: A0A6J1DYG4 (chitinase-3-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111025768 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.4e-45
Identity = 94/148 (63.51%), Postives = 109/148 (73.65%), Query Frame = 0


Query: 27  RVLREEYNYISIKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDS 86
           R+ R       I +WI S  NLP K+IVFGIPFHGWAWKLA+  +HDVFSKA GPA GD 
Sbjct: 212 RMARSLSANFGIDAWIQSLANLPRKQIVFGIPFHGWAWKLANPDKHDVFSKALGPAKGDQ 271

Query: 87  -ISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKPEKLRLAKS 146
            IS +GQID SN+K+FIK N A+  K+D RY I Y Y  TTWIAYE+E T P+K+  AKS
Sbjct: 272 YISQNGQIDXSNVKRFIKQNHAQYVKDDSRYSISYAYAGTTWIAYESEYTIPDKISSAKS 331

Query: 147 HHVLGYFASNIAADDDVNTLANAAKANW 174
             VLGYFA NIAADD+VNTLANAA+ NW
Sbjct: 332 SKVLGYFAWNIAADDEVNTLANAAQTNW 359

[Close]

BLAST of MS024897 vs. ExPASy TrEMBL
Match: A0A6J1CMZ0 (oviduct-specific glycoprotein-like OS=Momordica charantia OX=3673 GN=LOC111012959 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.1e-42
Identity = 90/148 (60.81%), Postives = 108/148 (72.97%), Query Frame = 0


Query: 27  RVLREEYNYISIKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVG-D 86
           R+ R       I +WI S  NLP K+IVF IPFHGWAWKLA+  ++DVFSKA GPA G  
Sbjct: 143 RIARSLSANFGIDAWIQSLANLPRKQIVFEIPFHGWAWKLANPDKNDVFSKALGPAKGYQ 202

Query: 87  SISSDGQIDYSNIKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKPEKLRLAKS 146
            IS DGQIDYSN++KFIK+N AE  K+D RY I Y Y  +TWIAYE+E   P+K+  AKS
Sbjct: 203 YISQDGQIDYSNVRKFIKENHAEYVKDDSRYSISYAYAGSTWIAYESEYIIPDKISSAKS 262

Query: 147 HHVLGYFASNIAADDDVNTLANAAKANW 174
             VLGYFA NIAAD++VNTLA+AA+ NW
Sbjct: 263 SKVLGYFAWNIAADNEVNTLASAAQTNW 290

[Close]

BLAST of MS024897 vs. ExPASy TrEMBL
Match: A0A6J1G2P4 (acidic mammalian chitinase-like OS=Cucurbita moschata OX=3662 GN=LOC111450275 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 4.2e-42
Identity = 82/136 (60.29%), Postives = 104/136 (76.47%), Query Frame = 0


Query: 38  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSN 97
           I+SW  S  NLP KKIVFGIPFHGWAWKL ++H+H +F+KA+G A G+ I   GQI YS+
Sbjct: 223 IRSWAQSLHNLPHKKIVFGIPFHGWAWKLFNSHQHTLFAKADGAATGEYIGPHGQIFYSD 282

Query: 98  IKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKPEKLRLAKSHHVLGYFASNIA 157
           ++KFI+DNQA  +  D  Y++ Y Y++TTWI YE+E T  +K+ LAK+  VLGYFA NIA
Sbjct: 283 VQKFIEDNQAGVEDKDKSYLVAYAYYETTWITYESEYTIADKIALAKTDKVLGYFAFNIA 342

Query: 158 ADDDVNTLANAAKANW 174
           ADD  NTLANAAK+NW
Sbjct: 343 ADDASNTLANAAKSNW 358

[Close]

BLAST of MS024897 vs. ExPASy TrEMBL
Match: A0A6J1G4H5 (chitotriosidase-1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450666 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.1e-41
Identity = 82/136 (60.29%), Postives = 103/136 (75.74%), Query Frame = 0


Query: 38  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSN 97
           I+SW  S  NLP KKIVFGIPFHGWAWKL ++H+H  F+KA+G A G+ I   GQI YS+
Sbjct: 223 IRSWAQSLHNLPHKKIVFGIPFHGWAWKLFNSHQHAPFAKADGAASGEYIGPHGQIFYSD 282

Query: 98  IKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKPEKLRLAKSHHVLGYFASNIA 157
           ++KFI+DNQA  +  D  Y++ Y Y++TTWI YE+E T  +K+ LAK+  VLGYFA NIA
Sbjct: 283 VQKFIEDNQAGVEDKDKSYLVAYAYYETTWITYESEYTIADKIALAKADKVLGYFAFNIA 342

Query: 158 ADDDVNTLANAAKANW 174
           ADD  NTLANAAK+NW
Sbjct: 343 ADDASNTLANAAKSNW 358

[Close]

BLAST of MS024897 vs. TAIR 10
Match: AT4G19810.1 (Glycosyl hydrolase family protein with chitinase insertion domain )

HSP 1 Score: 102.1 bits (253), Expect = 4.7e-22
Identity = 55/136 (40.44%), Postives = 81/136 (59.56%), Query Frame = 0


Query: 39  KSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSNI 98
           +SWI +   LP+KK V G P++G+AW+L +A+ H  ++    P  G +IS DG I Y  I
Sbjct: 240 RSWIQA--GLPAKKAVLGFPYYGYAWRLTNANSHSYYA----PTTGAAISPDGSIGYGQI 299

Query: 99  KKFIKDNQAENQKNDGRYVIG-YTYFDTTWIAYENEETKPEKLRLAKSHHVLGYFASNIA 158
           +KFI DN A    N    V+G Y Y  T WI Y++ ++   K+R AK   +LGYF+ ++ 
Sbjct: 300 RKFIVDNGATTVYNS--TVVGDYCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVG 359

Query: 159 ADDDVNTLANAAKANW 174
           ADD+ + L+ AA   W
Sbjct: 360 ADDN-SGLSRAASQAW 366

[Close]

BLAST of MS024897 vs. TAIR 10
Match: AT4G19770.1 (Glycosyl hydrolase family protein with chitinase insertion domain )

HSP 1 Score: 101.3 bits (251), Expect = 8.1e-22
Identity = 50/123 (40.65%), Postives = 72/123 (58.54%), Query Frame = 0


Query: 38  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSN 97
           +K WI++   LP++K V G P++GWAW LAD   H  +    GPA+ D    DG+I YS 
Sbjct: 130 VKDWIDA--GLPAEKAVLGFPYYGWAWTLADPKNHGYYVDTTGPAISD----DGEISYSQ 189

Query: 98  IKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKPEKLRLAKSHHVLGYFASNIA 157
           +K +I DN+A    +D   +  Y Y  TTWI Y++EE+   K+  AK   +LGYF+  + 
Sbjct: 190 LKTWIVDNKA-TTVHDNIVIGDYCYAGTTWIGYDSEESIVTKVIYAKQKGLLGYFSWQVG 245

Query: 158 ADD 161
            DD
Sbjct: 250 GDD 245

[Close]

BLAST of MS024897 vs. TAIR 10
Match: AT4G19820.1 (Glycosyl hydrolase family protein with chitinase insertion domain )

HSP 1 Score: 97.1 bits (240), Expect = 1.5e-20
Identity = 49/124 (39.52%), Postives = 73/124 (58.87%), Query Frame = 0


Query: 38  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSN 97
           +++W  +   LP+KK V G P +G+AW L DA  H+ ++ + GPA    IS DG I Y  
Sbjct: 237 VRAWTQA--GLPAKKAVLGFPLYGYAWCLTDAKNHNYYANSSGPA----ISPDGSIGYDQ 296

Query: 98  IKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKPEKLRLAKSHHVLGYFASNIA 157
           I++FI DN+A    N    V  Y Y   TWI Y++ ++   K++ AK   +LGYF+ +I 
Sbjct: 297 IRRFIVDNKATMVYN-SNLVQNYCYAKKTWIGYDDNQSIVMKVKYAKQRGLLGYFSWHIG 353

Query: 158 ADDD 162
           ADD+
Sbjct: 357 ADDN 353

[Close]

BLAST of MS024897 vs. TAIR 10
Match: AT4G19800.1 (Glycosyl hydrolase family protein with chitinase insertion domain )

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-18
Identity = 46/124 (37.10%), Postives = 71/124 (57.26%), Query Frame = 0


Query: 38  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSN 97
           ++ W  +   LP+KK V G P++GWAW LAD   +   +   GPA+ D    DG+I Y  
Sbjct: 217 VRDWTEA--GLPAKKAVLGFPYYGWAWTLADPDVNGYDANTTGPAISD----DGEISYRQ 276

Query: 98  IKKFIKDNQAENQKNDGRYVIGYTYFDTTWIAYENEETKPEKLRLAKSHHVLGYFASNIA 157
           ++ +I DN A  + +D   V  Y Y  TTWI Y++E++   K+  AK   +LGYF+ ++ 
Sbjct: 277 LQTWIVDNGA-TKVHDDMMVGDYCYAGTTWIGYDSEKSIVTKVIYAKQKGLLGYFSWHVG 333

Query: 158 ADDD 162
            DD+
Sbjct: 337 GDDN 333

[Close]

BLAST of MS024897 vs. TAIR 10
Match: AT4G19750.1 (Glycosyl hydrolase family protein with chitinase insertion domain )

HSP 1 Score: 86.3 bits (212), Expect = 2.7e-17
Identity = 48/123 (39.02%), Postives = 69/123 (56.10%), Query Frame = 0


Query: 38  IKSWINSFPNLPSKKIVFGIPFHGWAWKLADAHRHDVFSKAEGPAVGDSISSDGQIDYSN 97
           +  W+ +   LP+KK V G  + GWAW L DA  +   +  +G A    ISSDG I Y+ 
Sbjct: 228 LSKWLEA--KLPAKKAVLGFSYCGWAWTLEDAENNGYDAATDGAA----ISSDGSITYAK 287

Query: 98  IKKFIKDNQAENQKNDGRYVIG-YTYFDTTWIAYENEETKPEKLRLAKSHHVLGYFASNI 157
           I+ +I DN A    +    VIG Y Y  TTWI Y++ ++   K+R AK   +LGYF+ ++
Sbjct: 288 IRNYIIDNGAATFHDPA--VIGFYCYVGTTWIGYDDNQSIVSKVRYAKLKGLLGYFSWHV 342

Query: 158 AAD 160
            AD
Sbjct: 348 GAD 342

The following BLAST results are available for this feature:

BLAST of MS024897 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143191.1	4.2e-57	80.74	chitotriosidase-1-like [Momordica charantia]	[more]
XP_022159350.1	4.9e-45	63.51	chitinase-3-like protein 2 [Momordica charantia]	[more]
XP_023545402.1	2.3e-42	61.03	acidic mammalian chitinase-like, partial [Cucurbita pepo subsp. pepo]	[more]
XP_023521369.1	2.3e-42	61.03	acidic mammalian chitinase-like [Cucurbita pepo subsp. pepo]	[more]
XP_022142964.1	2.3e-42	60.81	oviduct-specific glycoprotein-like [Momordica charantia]	[more]

BLAST of MS024897 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81862	6.7e-21	40.44	Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1	[more]
A0A1B1J8Z2	4.9e-16	38.97	Class V chitinase CHIT5 OS=Lotus japonicus OX=34305 GN=CHIT5 PE=1 SV=2	[more]
A0A072VEP0	3.3e-12	34.33	Class V chitinase CHIT5a OS=Medicago truncatula OX=3880 GN=CHIT5A PE=1 SV=1	[more]
A0A072UR65	8.4e-08	30.09	Class V chitinase CHIT5b OS=Medicago truncatula OX=3880 GN=CHIT5B PE=1 SV=1	[more]

BLAST of MS024897 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPI6	2.1e-57	80.74	chitotriosidase-1-like OS=Momordica charantia OX=3673 GN=LOC111013120 PE=4 SV=1	[more]
A0A6J1DYG4	2.4e-45	63.51	chitinase-3-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111025768 PE=4 S...	[more]
A0A6J1CMZ0	1.1e-42	60.81	oviduct-specific glycoprotein-like OS=Momordica charantia OX=3673 GN=LOC11101295...	[more]
A0A6J1G2P4	4.2e-42	60.29	acidic mammalian chitinase-like OS=Cucurbita moschata OX=3662 GN=LOC111450275 PE...	[more]
A0A6J1G4H5	2.1e-41	60.29	chitotriosidase-1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450666 ...	[more]

BLAST of MS024897 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19810.1	4.7e-22	40.44	Glycosyl hydrolase family protein with chitinase insertion domain	[more]
AT4G19770.1	8.1e-22	40.65	Glycosyl hydrolase family protein with chitinase insertion domain	[more]
AT4G19820.1	1.5e-20	39.52	Glycosyl hydrolase family protein with chitinase insertion domain	[more]
AT4G19800.1	1.1e-18	37.10	Glycosyl hydrolase family protein with chitinase insertion domain	[more]
AT4G19750.1	2.7e-17	39.02	Glycosyl hydrolase family protein with chitinase insertion domain	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029070	Chitinase insertion domain superfamily	GENE3D	3.10.50.10		coord: 59..130 e-value: 1.4E-24 score: 89.2
IPR029070	Chitinase insertion domain superfamily	SUPERFAMILY	54556	Chitinase insertion domain	coord: 61..130
IPR001223	Glycoside hydrolase family 18, catalytic domain	PFAM	PF00704	Glyco_hydro_18	coord: 37..159 e-value: 1.9E-13 score: 50.8
IPR001223	Glycoside hydrolase family 18, catalytic domain	PROSITE	PS51910	GH18_2	coord: 1..173 score: 10.826267
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 36..160 e-value: 1.4E-24 score: 89.2
None	No IPR available	PANTHER	PTHR11177	CHITINASE	coord: 38..168
None	No IPR available	PANTHER	PTHR11177:SF351	CHITINASE-LIKE PROTEIN-RELATED	coord: 38..168
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 35..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS024897.1	MS024897.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process