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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAAGACGAGCCTGTAGATATGCTAATATTCGGAAATGAAGATACCCACGAGAGAGACGAGGGTTTCCGTGATGGAGTGGTGGGATCTGATAGCCACTGGGAAGAGAGAACTGAACGCACAGAAGAACAAGACGGCAGTGAAGAAGATACTGCTGTGAAAGCCATCGTGCAGATTGAGTTCATTCGTCCACCCACGACTTTTCATTTTAAGTAA mRNA sequence ATGGAAGACGAGCCTGTAGATATGCTAATATTCGGAAATGAAGATACCCACGAGAGAGACGAGGGTTTCCGTGATGGAGTGGTGGGATCTGATAGCCACTGGGAAGAGAGAACTGAACGCACAGAAGAACAAGACGGCAGTGAAGAAGATACTGCTGTGAAAGCCATCGTGCAGATTGAGTTCATTCGTCCACCCACGACTTTTCATTTTAAGTAA Coding sequence (CDS) ATGGAAGACGAGCCTGTAGATATGCTAATATTCGGAAATGAAGATACCCACGAGAGAGACGAGGGTTTCCGTGATGGAGTGGTGGGATCTGATAGCCACTGGGAAGAGAGAACTGAACGCACAGAAGAACAAGACGGCAGTGAAGAAGATACTGCTGTGAAAGCCATCGTGCAGATTGAGTTCATTCGTCCACCCACGACTTTTCATTTTAAGTAA Protein sequence MEDEPVDMLIFGNEDTHERDEGFRDGVVGSDSHWEERTERTEEQDGSEEDTAVKAIVQIEFIRPPTTFHFK
Homology
BLAST of MS024550 vs. NCBI nr
Match: KAG6602739.1 (hypothetical protein SDJN03_07972, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 85.9 bits (211), Expect = 1.5e-13 Identity = 45/64 (70.31%), Postives = 50/64 (78.12%), Query Frame = 0
Query: 4 EPVDMLIFGNEDTHERDEGFRDGVVGSDSHWEERTERTEEQDGSEEDTAVKAIVQIEFIR 63
EP+D L+ GNED HERDE F GVVG D HWEER ERT+ DG EED AV A+VQI+FIR
Sbjct: 153 EPLDRLMDGNEDAHERDEDF-CGVVGVDMHWEERIERTKALDGIEEDIAVNAMVQIQFIR 212
Query: 64 PPTT 68
PPTT
Sbjct: 213 PPTT 215
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KAG6602739.1 | 1.5e-13 | 70.31 | hypothetical protein SDJN03_07972, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 10..41 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..50 |
Relationships
The following mRNA feature(s) are a part of this gene:
| Feature Name | Unique Name | Type |
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| MS024550.1 | MS024550.1 | mRNA |
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