Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCGCCAATTGGTTGTCCTCGCCCTTCTCTTCGCCGCCGTCGTCGGCGTTGTATCCGCCGCCGAGGCCCCATCCACCGCTCCGGCTGCTGCTCCCTCCAAGTCCAATTCCACCGAAGCCAAAGATTCCCCTGCTTCTAAATCTCCCGCCTCTGCTCCGGCTGCTGCTCCCTCCAAATCCAATTCCTCCTCCGCCCCCGCCGCTGCCGAGTCCGACGCCCCATCTTCCGCCACTCCCGCCGCCGATGCTCCCAAGGGGGCTGCTTCATCTCCCGCGGCTGATGCCCCAAAGGGCGCGAAAGCAGAGTCTGCCCCCGCCGGCTCCCCTGCTTCGTCCCCTGCTGCTGACGGGCCCGCATCCGACGAATCCCCCGCCGCATCCCCCGACGCCGCCGATGTTTCATCCCCACCCTCCCCCAGCGGTCCCGCCGCCGGACCCGCCGCTGACAGTGACGCTGCAGATGCTGATGCTGATGCACCCGCTGCCGGAGGACCCGCCGGCGATGCACCCTCCGATGCTCCGGCCAGTGGAGCTTCGTTCGTGAAGGCGTCGGCTGCTGCCATTGCCGGAGTTTGCGCAGTTGCTGGATTCTTTGCCTTCTAA
mRNA sequence
ATGGCCCGCCAATTGGTTGTCCTCGCCCTTCTCTTCGCCGCCGTCGTCGGCGTTGTATCCGCCGCCGAGGCCCCATCCACCGCTCCGGCTGCTGCTCCCTCCAAGTCCAATTCCACCGAAGCCAAAGATTCCCCTGCTTCTAAATCTCCCGCCTCTGCTCCGGCTGCTGCTCCCTCCAAATCCAATTCCTCCTCCGCCCCCGCCGCTGCCGAGTCCGACGCCCCATCTTCCGCCACTCCCGCCGCCGATGCTCCCAAGGGGGCTGCTTCATCTCCCGCGGCTGATGCCCCAAAGGGCGCGAAAGCAGAGTCTGCCCCCGCCGGCTCCCCTGCTTCGTCCCCTGCTGCTGACGGGCCCGCATCCGACGAATCCCCCGCCGCATCCCCCGACGCCGCCGATGTTTCATCCCCACCCTCCCCCAGCGGTCCCGCCGCCGGACCCGCCGCTGACAGTGACGCTGCAGATGCTGATGCTGATGCACCCGCTGCCGGAGGACCCGCCGGCGATGCACCCTCCGATGCTCCGGCCAGTGGAGCTTCGTTCGTGAAGGCGTCGGCTGCTGCCATTGCCGGAGTTTGCGCAGTTGCTGGATTCTTTGCCTTCTAA
Coding sequence (CDS)
ATGGCCCGCCAATTGGTTGTCCTCGCCCTTCTCTTCGCCGCCGTCGTCGGCGTTGTATCCGCCGCCGAGGCCCCATCCACCGCTCCGGCTGCTGCTCCCTCCAAGTCCAATTCCACCGAAGCCAAAGATTCCCCTGCTTCTAAATCTCCCGCCTCTGCTCCGGCTGCTGCTCCCTCCAAATCCAATTCCTCCTCCGCCCCCGCCGCTGCCGAGTCCGACGCCCCATCTTCCGCCACTCCCGCCGCCGATGCTCCCAAGGGGGCTGCTTCATCTCCCGCGGCTGATGCCCCAAAGGGCGCGAAAGCAGAGTCTGCCCCCGCCGGCTCCCCTGCTTCGTCCCCTGCTGCTGACGGGCCCGCATCCGACGAATCCCCCGCCGCATCCCCCGACGCCGCCGATGTTTCATCCCCACCCTCCCCCAGCGGTCCCGCCGCCGGACCCGCCGCTGACAGTGACGCTGCAGATGCTGATGCTGATGCACCCGCTGCCGGAGGACCCGCCGGCGATGCACCCTCCGATGCTCCGGCCAGTGGAGCTTCGTTCGTGAAGGCGTCGGCTGCTGCCATTGCCGGAGTTTGCGCAGTTGCTGGATTCTTTGCCTTCTAA
Protein sequence
MARQLVVLALLFAAVVGVVSAAEAPSTAPAAAPSKSNSTEAKDSPASKSPASAPAAAPSKSNSSSAPAAAESDAPSSATPAADAPKGAASSPAADAPKGAKAESAPAGSPASSPAADGPASDESPAASPDAADVSSPPSPSGPAAGPAADSDAADADADAPAAGGPAGDAPSDAPASGASFVKASAAAIAGVCAVAGFFAF
Homology
BLAST of MS024489 vs. NCBI nr
Match:
XP_022133599.1 (brain acid soluble protein 1 [Momordica charantia])
HSP 1 Score: 283.5 bits (724), Expect = 1.4e-72
Identity = 194/201 (96.52%), Postives = 196/201 (97.51%), Query Frame = 0
Query: 1 MARQLVVLALLFAAVVGVVSAAEAPSTAPAAAPSKSNSTEAKDSPASKSPASAPAAAPSK 60
MARQLVVLALLFAAVVGVVSAA+APSTAPAAAPSKSNSTEAKDSPASKSPASAPAAAPSK
Sbjct: 1 MARQLVVLALLFAAVVGVVSAAKAPSTAPAAAPSKSNSTEAKDSPASKSPASAPAAAPSK 60
Query: 61 SNSSSAPAAAESDAPSSATPAADAPKGAASSPAADAPKGAKAESAPAGSPASSPAADGPA 120
SNSSSAPAAAESDAPSSATPAADAPKGAASSPAADAPKG KAESAPAGSPASSPAADGPA
Sbjct: 61 SNSSSAPAAAESDAPSSATPAADAPKGAASSPAADAPKGTKAESAPAGSPASSPAADGPA 120
Query: 121 SDESPAASPDAADVSSPPSPSGPAAGPAADSDAADADADAPAAGGPAGDAPSDAPASGAS 180
SDESPAASPDAADVSSPPSPS GPAADSDAADADADAPAAGGPAGDAP+DAPASGAS
Sbjct: 121 SDESPAASPDAADVSSPPSPS----GPAADSDAADADADAPAAGGPAGDAPTDAPASGAS 180
Query: 181 FVKASAAAIAGVCAVAGFFAF 202
FVKASAAAIAGVCAVAGFFAF
Sbjct: 181 FVKASAAAIAGVCAVAGFFAF 197
BLAST of MS024489 vs. NCBI nr
Match:
XP_038889219.1 (classical arabinogalactan protein 11 [Benincasa hispida])
HSP 1 Score: 105.9 bits (263), Expect = 4.1e-19
Identity = 120/203 (59.11%), Postives = 142/203 (69.95%), Query Frame = 0
Query: 1 MARQLVVLALLFAAVVGVVSAAEAPSTAPAAAPSKSNSTEAKDSPASKSPASAPAAAPSK 60
MARQLV+LALLF AVVG+VSAAEAP+ +PA++P A D A PAAAPSK
Sbjct: 1 MARQLVLLALLFTAVVGIVSAAEAPTASPASSP-------AADDHAVSDAEKTPAAAPSK 60
Query: 61 SNSSSAPAAAESDAPSSATP-AADAPKGAASSPAADAPKGAKAESAPAGSPASSPAADGP 120
S PAAA + AP +ATP AA AP+GAASSP A+ AES AG PAS PA D
Sbjct: 61 S-----PAAA-TTAPIAATPSAAGAPEGAASSPQAE------AESPAAGGPASGPAGDES 120
Query: 121 ASDESPAASPDA-ADVSSPPSPSGPAAGPAADSDAADADADAPAAGGPAGDAPSDAPASG 180
+SD SPA +P++ ADVSSPPSP+GPAAGP AD A+D +A AA PA D+P+DA ASG
Sbjct: 121 SSD-SPAGAPESDADVSSPPSPTGPAAGP-ADGPASDGEA---AADAPA-DSPTDA-ASG 177
Query: 181 ASFVKASAAAIAGVCAVAGFFAF 202
SF+K S AA+AG+ AVAGFFAF
Sbjct: 181 GSFLKVSVAAVAGISAVAGFFAF 177
BLAST of MS024489 vs. NCBI nr
Match:
XP_031741751.1 (lysine-rich arabinogalactan protein 17 [Cucumis sativus])
HSP 1 Score: 105.1 bits (261), Expect = 7.0e-19
Identity = 115/204 (56.37%), Postives = 146/204 (71.57%), Query Frame = 0
Query: 1 MARQLVVLALLF-AAVVGVVSAAEAPSTAPAAAPSKSNSTEAKDSPASKSP-ASAPAAAP 60
MARQ +LALLF AAVVG+VSAAEAP+T+PA++P+ S ++ K + S A PAAAP
Sbjct: 1 MARQFALLALLFSAAVVGIVSAAEAPATSPASSPASSPASSPKAADVEPSDGAKTPAAAP 60
Query: 61 SKSNSSSAPAAAESDAPSSATP-AADAPKGAASSPAADAPKGAKAESAPAGSPASSPAAD 120
SKS PAAA +DAP +ATP AA APKGAAS+P+A A +A++ AG PASSPA D
Sbjct: 61 SKS-----PAAA-ADAPIAATPSAAGAPKGAASAPSAKA-GAPEADTPVAGGPASSPAGD 120
Query: 121 GPASDESPAASPDAADVSSPPSPSGPAAGPAADSDAADADADAPAAGGPAGDAPSDAPAS 180
+S +PA +P+ ADVSSPPSP+GPAAGP +D+ ADA AD+ +A PA D PSD+PA+
Sbjct: 121 ESSSTVAPAGAPE-ADVSSPPSPTGPAAGPTSDA-VADAPADS-SADSPA-DTPSDSPAN 180
Query: 181 GASFVKASAAAIAGVCAVAGFFAF 202
G S VK S AA+AG+ + G F F
Sbjct: 181 GGSLVKVSVAAVAGISGIVGLFVF 193
BLAST of MS024489 vs. NCBI nr
Match:
XP_008458926.1 (PREDICTED: skin secretory protein xP2 [Cucumis melo])
HSP 1 Score: 94.7 bits (234), Expect = 9.4e-16
Identity = 107/210 (50.95%), Postives = 138/210 (65.71%), Query Frame = 0
Query: 1 MARQLVVLALLF-AAVVGVVSAAEAPSTAPAAAPSKS-NSTEAKDSPASKSPASAPAAAP 60
MARQ ++LALLF AAV+G+VSAAEAP+ +PA++P+ S + + + S K+PA+AP+ AP
Sbjct: 1 MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP 60
Query: 61 SKSNSSSAPAAAESDAPSSATP-AADAPKGAASSPAADAPKGAKAESAPAGSPASSPAAD 120
AA +DAP + TP AA APKGAAS+PAA +A+S AG PASSPA D
Sbjct: 61 ----------AAAADAPIAVTPSAAGAPKGAASAPAAKG-GAPEADSPVAGGPASSPAGD 120
Query: 121 GPASDESPAASP-----DAADVSSPPSPSGPAAGPAADSDAADADADAPAAGGPAGDAPS 180
+S +PA +P A+VSSPPSP+GPAAGP A+DA ADAPA D+P+
Sbjct: 121 ESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGP-----ASDAAADAPA------DSPA 180
Query: 181 DAPA-SGASFVKASAAAIAGVCAVAGFFAF 202
D+PA SG S VK S AA+AG+ V G F F
Sbjct: 181 DSPAPSGGSLVKVSVAAVAGISGVVGLFVF 188
BLAST of MS024489 vs. NCBI nr
Match:
XP_022959826.1 (skin secretory protein xP2-like [Cucurbita moschata])
HSP 1 Score: 69.7 bits (169), Expect = 3.2e-08
Identity = 104/235 (44.26%), Postives = 131/235 (55.74%), Query Frame = 0
Query: 1 MARQLVVLALLFAAVVGVVSAAEAP--------STAPAAAPSKSNSTEAKDSP-----AS 60
MARQL++LALLFAAV+G+ SAA+AP + PAAAP SNS+ A D+P A
Sbjct: 80 MARQLLLLALLFAAVLGIASAAKAPAPDADSAAAKTPAAAP--SNSSSAADAPKGAASAP 139
Query: 61 KSPASAPAAAPSKSNSSSAPAAAESDAP---------SSATPAAD--APKGAASSPAAD- 120
K+ A AP A + + AE+ AP + P AD APK A +P AD
Sbjct: 140 KAEADAPEADAGAPKADAGAPKAEAGAPEADAGAPKAEAGAPEADAGAPKAEAGAPEADA 199
Query: 121 -APK----------GAKAESAPAGSPASSPAADGPASDESPAASPDA-ADVSSPPSPSGP 180
APK GA + APAGSPAS GPASDESP+A+P++ A+ SSPPSPSGP
Sbjct: 200 EAPKAEAGAPEADAGAPSADAPAGSPAS-----GPASDESPSAAPESDAEASSPPSPSGP 259
Query: 181 AAGPAADSDAADADADAPAAGGPAGDAPSDAPASGASFVKASAAAIAGVCAVAGF 199
A GPA++ +AADA A DA SG+SF+K SA +A + V F
Sbjct: 260 AEGPASEEEAADAPA-------------PDASGSGSSFLKMSATTVATIAGVIVF 294
BLAST of MS024489 vs. ExPASy TrEMBL
Match:
A0A6J1BWF7 (brain acid soluble protein 1 OS=Momordica charantia OX=3673 GN=LOC111006138 PE=4 SV=1)
HSP 1 Score: 283.5 bits (724), Expect = 6.9e-73
Identity = 194/201 (96.52%), Postives = 196/201 (97.51%), Query Frame = 0
Query: 1 MARQLVVLALLFAAVVGVVSAAEAPSTAPAAAPSKSNSTEAKDSPASKSPASAPAAAPSK 60
MARQLVVLALLFAAVVGVVSAA+APSTAPAAAPSKSNSTEAKDSPASKSPASAPAAAPSK
Sbjct: 1 MARQLVVLALLFAAVVGVVSAAKAPSTAPAAAPSKSNSTEAKDSPASKSPASAPAAAPSK 60
Query: 61 SNSSSAPAAAESDAPSSATPAADAPKGAASSPAADAPKGAKAESAPAGSPASSPAADGPA 120
SNSSSAPAAAESDAPSSATPAADAPKGAASSPAADAPKG KAESAPAGSPASSPAADGPA
Sbjct: 61 SNSSSAPAAAESDAPSSATPAADAPKGAASSPAADAPKGTKAESAPAGSPASSPAADGPA 120
Query: 121 SDESPAASPDAADVSSPPSPSGPAAGPAADSDAADADADAPAAGGPAGDAPSDAPASGAS 180
SDESPAASPDAADVSSPPSPS GPAADSDAADADADAPAAGGPAGDAP+DAPASGAS
Sbjct: 121 SDESPAASPDAADVSSPPSPS----GPAADSDAADADADAPAAGGPAGDAPTDAPASGAS 180
Query: 181 FVKASAAAIAGVCAVAGFFAF 202
FVKASAAAIAGVCAVAGFFAF
Sbjct: 181 FVKASAAAIAGVCAVAGFFAF 197
BLAST of MS024489 vs. ExPASy TrEMBL
Match:
A0A1S3CA92 (skin secretory protein xP2 OS=Cucumis melo OX=3656 GN=LOC103498187 PE=4 SV=1)
HSP 1 Score: 94.7 bits (234), Expect = 4.6e-16
Identity = 107/210 (50.95%), Postives = 138/210 (65.71%), Query Frame = 0
Query: 1 MARQLVVLALLF-AAVVGVVSAAEAPSTAPAAAPSKS-NSTEAKDSPASKSPASAPAAAP 60
MARQ ++LALLF AAV+G+VSAAEAP+ +PA++P+ S + + + S K+PA+AP+ AP
Sbjct: 1 MARQFILLALLFSAAVIGIVSAAEAPAASPASSPASSPKAADLEPSDDGKTPAAAPSKAP 60
Query: 61 SKSNSSSAPAAAESDAPSSATP-AADAPKGAASSPAADAPKGAKAESAPAGSPASSPAAD 120
AA +DAP + TP AA APKGAAS+PAA +A+S AG PASSPA D
Sbjct: 61 ----------AAAADAPIAVTPSAAGAPKGAASAPAAKG-GAPEADSPVAGGPASSPAGD 120
Query: 121 GPASDESPAASP-----DAADVSSPPSPSGPAAGPAADSDAADADADAPAAGGPAGDAPS 180
+S +PA +P A+VSSPPSP+GPAAGP A+DA ADAPA D+P+
Sbjct: 121 ESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGP-----ASDAAADAPA------DSPA 180
Query: 181 DAPA-SGASFVKASAAAIAGVCAVAGFFAF 202
D+PA SG S VK S AA+AG+ V G F F
Sbjct: 181 DSPAPSGGSLVKVSVAAVAGISGVVGLFVF 188
BLAST of MS024489 vs. ExPASy TrEMBL
Match:
A0A0A0KUB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517830 PE=4 SV=1)
HSP 1 Score: 79.0 bits (193), Expect = 2.6e-11
Identity = 95/181 (52.49%), Postives = 123/181 (67.96%), Query Frame = 0
Query: 22 AEAPSTAPAAAPSKSNSTEAKDSPASKSPASAPAAAPSKSNSSSAPAAAESDAPSSATP- 81
A +P+++PA++P K+ E D A PAAAPSKS PAAA +DAP +ATP
Sbjct: 84 ASSPASSPASSP-KAADVEPSDG------AKTPAAAPSKS-----PAAA-ADAPIAATPS 143
Query: 82 AADAPKGAASSPAADAPKGAKAESAPAGSPASSPAADGPASDESPAASPDAADVSSPPSP 141
AA APKGAAS+P+A A +A++ AG PASSPA D +S +PA +P+ ADVSSPPSP
Sbjct: 144 AAGAPKGAASAPSAKA-GAPEADTPVAGGPASSPAGDESSSTVAPAGAPE-ADVSSPPSP 203
Query: 142 SGPAAGPAADSDAADADADAPAAGGPAGDAPSDAPASGASFVKASAAAIAGVCAVAGFFA 201
+GPAAGP +D+ ADA AD+ +A PA D PSD+PA+G S VK S AA+AG+ + G F
Sbjct: 204 TGPAAGPTSDA-VADAPADS-SADSPA-DTPSDSPANGGSLVKVSVAAVAGISGIVGLFV 246
BLAST of MS024489 vs. ExPASy TrEMBL
Match:
A0A6J1H5Y9 (skin secretory protein xP2-like OS=Cucurbita moschata OX=3662 GN=LOC111460771 PE=4 SV=1)
HSP 1 Score: 69.7 bits (169), Expect = 1.6e-08
Identity = 104/235 (44.26%), Postives = 131/235 (55.74%), Query Frame = 0
Query: 1 MARQLVVLALLFAAVVGVVSAAEAP--------STAPAAAPSKSNSTEAKDSP-----AS 60
MARQL++LALLFAAV+G+ SAA+AP + PAAAP SNS+ A D+P A
Sbjct: 80 MARQLLLLALLFAAVLGIASAAKAPAPDADSAAAKTPAAAP--SNSSSAADAPKGAASAP 139
Query: 61 KSPASAPAAAPSKSNSSSAPAAAESDAP---------SSATPAAD--APKGAASSPAAD- 120
K+ A AP A + + AE+ AP + P AD APK A +P AD
Sbjct: 140 KAEADAPEADAGAPKADAGAPKAEAGAPEADAGAPKAEAGAPEADAGAPKAEAGAPEADA 199
Query: 121 -APK----------GAKAESAPAGSPASSPAADGPASDESPAASPDA-ADVSSPPSPSGP 180
APK GA + APAGSPAS GPASDESP+A+P++ A+ SSPPSPSGP
Sbjct: 200 EAPKAEAGAPEADAGAPSADAPAGSPAS-----GPASDESPSAAPESDAEASSPPSPSGP 259
Query: 181 AAGPAADSDAADADADAPAAGGPAGDAPSDAPASGASFVKASAAAIAGVCAVAGF 199
A GPA++ +AADA A DA SG+SF+K SA +A + V F
Sbjct: 260 AEGPASEEEAADAPA-------------PDASGSGSSFLKMSATTVATIAGVIVF 294
BLAST of MS024489 vs. ExPASy TrEMBL
Match:
A0A5D3CDS4 (Skin secretory protein xP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold249G00550 PE=4 SV=1)
HSP 1 Score: 68.9 bits (167), Expect = 2.7e-08
Identity = 85/155 (54.84%), Postives = 100/155 (64.52%), Query Frame = 0
Query: 54 PAAAPSKSNSSSAPAAAESDAPSSATP-AADAPKGAASSPAADAPKGAKAESAPAGSPAS 113
PAAAPSK APAAA DAP + TP AA APKGAAS+PAA +A+S AG PAS
Sbjct: 16 PAAAPSK-----APAAA-VDAPIAVTPSAAGAPKGAASAPAAKG-GAPEADSPVAGGPAS 75
Query: 114 SPAADGPASDESPAASP-----DAADVSSPPSPSGPAAGPAADSDAADADADAPAAGGPA 173
SPA D +S +PA +P A+VSSPPSP+GPAAGP A+DA ADAPA
Sbjct: 76 SPAGDESSSTVAPAGAPAGAPASDAEVSSPPSPTGPAAGP-----ASDAAADAPA----- 135
Query: 174 GDAPSDAPA-SGASFVKASAAAIAGVCAVAGFFAF 202
D+P+D+PA SG S VK S AA+AG+ V G F F
Sbjct: 136 -DSPADSPAPSGGSLVKVSVAAVAGISGVVGLFVF 152
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1BWF7 | 6.9e-73 | 96.52 | brain acid soluble protein 1 OS=Momordica charantia OX=3673 GN=LOC111006138 PE=4... | [more] |
A0A1S3CA92 | 4.6e-16 | 50.95 | skin secretory protein xP2 OS=Cucumis melo OX=3656 GN=LOC103498187 PE=4 SV=1 | [more] |
A0A0A0KUB8 | 2.6e-11 | 52.49 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517830 PE=4 SV=1 | [more] |
A0A6J1H5Y9 | 1.6e-08 | 44.26 | skin secretory protein xP2-like OS=Cucurbita moschata OX=3662 GN=LOC111460771 PE... | [more] |
A0A5D3CDS4 | 2.7e-08 | 54.84 | Skin secretory protein xP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... | [more] |
Match Name | E-value | Identity | Description | |