MS024480 (gene) Bitter gourd (TR) v1

Overview


Name	MS024480
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	UPF0481 protein At3g47200-like
Location	scaffold595_1: 1030196 .. 1030822 (-)
RNA-Seq Expression	MS024480
Synteny	MS024480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGGCCGCCATCGATGCCCATCAGAATTATTAAAGACAACAATGAGTCTGCCGTGGTTATTCGGGTCAGGGAAAATCTCAATCAACTATTGTTGGATACTCCTGCCGTGGAGGCCGAAGGGCTTTCAATCTACAAAATACCACACTTCATGAGACAAGTTCAGCCCAAAGCTTTATTTGAGCCACAGTTGGTGTCGTTTGGGCCATACCACCATGGAGAATCGCATTTGTTTCGGATGGAACTGGAAAAACGTCAAGCATTTAAGAATTTTCAAACCAGGTACGGATTGCCCGTAGAGCCCATAGTGGAACGTGTGTGGAGCATGCTGGAAGATGTGCAAGGATGCTATGATGAGCTTGAGGGTGAATGGAAATTAGAAGATGGAGCAGCCAAGTTCTTGCAGCTCATGGTCCTGGATGGTTGTTTCATGCTGGAAGTCCTGTTGGCCGACAGTGGCGGCTGGCTAAGTAATATGAGGGAGGATATAGTGCGGGATATGCTGCTGCTTGAGAATCAGTTGCCTATGAAGCTTCTGGAGGAGCTGCATTCCATGGCAAACCATTCCTATTTAAAGGCATGCACCTTTCATCTCTCTTCTCATTTTATTAATCTCCATTATTGA

mRNA sequence

ATGGAGAGGCCGCCATCGATGCCCATCAGAATTATTAAAGACAACAATGAGTCTGCCGTGGTTATTCGGGTCAGGGAAAATCTCAATCAACTATTGTTGGATACTCCTGCCGTGGAGGCCGAAGGGCTTTCAATCTACAAAATACCACACTTCATGAGACAAGTTCAGCCCAAAGCTTTATTTGAGCCACAGTTGGTGTCGTTTGGGCCATACCACCATGGAGAATCGCATTTGTTTCGGATGGAACTGGAAAAACGTCAAGCATTTAAGAATTTTCAAACCAGGTACGGATTGCCCGTAGAGCCCATAGTGGAACGTGTGTGGAGCATGCTGGAAGATGTGCAAGGATGCTATGATGAGCTTGAGGGTGAATGGAAATTAGAAGATGGAGCAGCCAAGTTCTTGCAGCTCATGGTCCTGGATGGTTGTTTCATGCTGGAAGTCCTGTTGGCCGACAGTGGCGGCTGGCTAAGTAATATGAGGGAGGATATAGTGCGGGATATGCTGCTGCTTGAGAATCAGTTGCCTATGAAGCTTCTGGAGGAGCTGCATTCCATGGCAAACCATTCCTATTTAAAGGCATGCACCTTTCATCTCTCTTCTCATTTTATTAATCTCCATTATTGA

Coding sequence (CDS)

ATGGAGAGGCCGCCATCGATGCCCATCAGAATTATTAAAGACAACAATGAGTCTGCCGTGGTTATTCGGGTCAGGGAAAATCTCAATCAACTATTGTTGGATACTCCTGCCGTGGAGGCCGAAGGGCTTTCAATCTACAAAATACCACACTTCATGAGACAAGTTCAGCCCAAAGCTTTATTTGAGCCACAGTTGGTGTCGTTTGGGCCATACCACCATGGAGAATCGCATTTGTTTCGGATGGAACTGGAAAAACGTCAAGCATTTAAGAATTTTCAAACCAGGTACGGATTGCCCGTAGAGCCCATAGTGGAACGTGTGTGGAGCATGCTGGAAGATGTGCAAGGATGCTATGATGAGCTTGAGGGTGAATGGAAATTAGAAGATGGAGCAGCCAAGTTCTTGCAGCTCATGGTCCTGGATGGTTGTTTCATGCTGGAAGTCCTGTTGGCCGACAGTGGCGGCTGGCTAAGTAATATGAGGGAGGATATAGTGCGGGATATGCTGCTGCTTGAGAATCAGTTGCCTATGAAGCTTCTGGAGGAGCTGCATTCCATGGCAAACCATTCCTATTTAAAGGCATGCACCTTTCATCTCTCTTCTCATTTTATTAATCTCCATTATTGA

Protein sequence

MERPPSMPIRIIKDNNESAVVIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKALFEPQLVSFGPYHHGESHLFRMELEKRQAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLLLENQLPMKLLEELHSMANHSYLKACTFHLSSHFINLHY

Homology

[Close]

BLAST of MS024480 vs. NCBI nr
Match: XP_022148888.1 (UPF0481 protein At3g47200-like [Momordica charantia])

HSP 1 Score: 391.3 bits (1004), Expect = 5.0e-105
Identity = 192/193 (99.48%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNNESAVVIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKAL 60
           MERPPSMPIRIIKDNNESAVVIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKAL
Sbjct: 1   MERPPSMPIRIIKDNNESAVVIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKAL 60

Query: 61  FEPQLVSFGPYHHGESHLFRMELEKRQAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDE 120
           FEPQLVSFGPYHHGESHLFRMELEKR+AFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDE
Sbjct: 61  FEPQLVSFGPYHHGESHLFRMELEKRKAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDE 120

Query: 121 LEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLLLENQLPMKLL 180
           LEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLLLENQLPMKLL
Sbjct: 121 LEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLLLENQLPMKLL 180

Query: 181 EELHSMANHSYLK 194
           EELHSMANHSYLK
Sbjct: 181 EELHSMANHSYLK 193

[Close]

BLAST of MS024480 vs. NCBI nr
Match: XP_038875622.1 (UPF0481 protein At3g47200-like [Benincasa hispida])

HSP 1 Score: 179.9 bits (455), Expect = 2.3e-41
Identity = 105/195 (53.85%), Postives = 139/195 (71.28%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNNE----SAVVIRVRENLNQLLLDTPAVEAEG-------LSIYKIP 60
           ME  P +PIR I+++N+      VVI+V+ NLN+ LLD+ AV+  G        SIYKIP
Sbjct: 1   MEEQPLLPIRHIRNDNQVGKKDDVVIQVKNNLNK-LLDSAAVDEMGPLGESTQPSIYKIP 60

Query: 61  HFMRQVQPKALFEPQLVSFGPYHHGESHLFRMELEKRQAFKNFQTRYGLPVEPIVERVWS 120
            FMR++Q KA FEPQLVS GPYHHG+ HL  ME EK++AF+ F   YGL +E IVE + +
Sbjct: 61  EFMRKIQAKA-FEPQLVSLGPYHHGKEHLVSMEEEKQKAFRRFVNDYGLNLESIVESMSN 120

Query: 121 MLEDVQGCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDML 180
            LE++ G YD+L+ +WK +DG AKFL++M++DGCFML+    +    LS MR DI RDML
Sbjct: 121 NLENLWGAYDKLDEKWK-QDG-AKFLEVMIVDGCFMLD-FFKECPYSLSTMRWDIKRDML 180

Query: 181 LLENQLPMKLLEELH 185
           LLENQLPM+LL+EL+
Sbjct: 181 LLENQLPMQLLQELY 190

[Close]

BLAST of MS024480 vs. NCBI nr
Match: KAG6592830.1 (UPF0481 protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 168.3 bits (425), Expect = 6.9e-38
Identity = 98/198 (49.49%), Postives = 132/198 (66.67%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNN---ESAVVIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQP 60
           ME+ P + I++I+D+N      +VI+V E LN+  LD+PA +    SIYK+P FMRQ   
Sbjct: 10  MEKQPPLSIKLIRDDNVDKPDDMVIQVMECLNEPGLDSPANKH---SIYKLPFFMRQTHS 69

Query: 61  KAL---FEPQLVSFGPYHHGESHLFRMELEKRQAFKNFQTRYGLPVEPIVERVWSMLEDV 120
           +A    F+PQ+VSFGPYHHG+ HL  ME +K +AF   +TR GLPVE IV  V ++L+D+
Sbjct: 70  EAFNKAFDPQVVSFGPYHHGKKHLSPMERQKAKAFNTLKTR-GLPVEAIVREVSTILDDL 129

Query: 121 QGCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLLLENQ 180
              YD LE EW  + G  KFL+LM++DGCFML  L  D    L NM+ DI  + LLLENQ
Sbjct: 130 LESYDRLEEEWTQDPG--KFLKLMIVDGCFMLR-LFCDCPASLVNMKMDIRLETLLLENQ 189

Query: 181 LPMKLLEELHSMANHSYL 193
           LP+KLL +LHS+A   ++
Sbjct: 190 LPLKLLHKLHSIAGPIFI 200

[Close]

BLAST of MS024480 vs. NCBI nr
Match: XP_023513985.1 (UPF0481 protein At3g47200-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-37
Identity = 96/197 (48.73%), Postives = 133/197 (67.51%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNN--ESAVVIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPK 60
           ME+ P + I++I+D+N  +  +VI+V   LN+  LD+PA+      IYK+P FMRQ  P+
Sbjct: 10  MEKQPPLSIKLIRDDNVDKPDMVIQVMGCLNEPGLDSPAITH---CIYKLPFFMRQTHPE 69

Query: 61  AL---FEPQLVSFGPYHHGESHLFRMELEKRQAFKNFQTRYGLPVEPIVERVWSMLEDVQ 120
           A    F+PQ+VSFGPYH G+ HL  ME EK + F + +TR GLPVE +V  V S+L+D+ 
Sbjct: 70  AFNTAFDPQVVSFGPYHQGKHHLSPMEREKAKVFNSLKTR-GLPVEAVVSGVHSILDDLL 129

Query: 121 GCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLLLENQL 180
           G YD L+ EW    G  KFL LM++DGCF+LE LL +    L NM+ DI ++ LLLENQL
Sbjct: 130 GSYDRLDQEWTQHPG--KFLMLMIVDGCFLLE-LLCNCPASLINMKMDIRQETLLLENQL 189

Query: 181 PMKLLEELHSMANHSYL 193
           PMKLL +L+S+A   ++
Sbjct: 190 PMKLLHQLYSIAGPIFI 199

[Close]

BLAST of MS024480 vs. NCBI nr
Match: XP_023004238.1 (UPF0481 protein At3g47200-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 167.2 bits (422), Expect = 1.5e-37
Identity = 98/200 (49.00%), Postives = 136/200 (68.00%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNN---ESAVVIRVRENLNQLLLDTPAV-------EAEGLSIYKIPH 60
           ME+ P + + + +D+N   ++ +V+RV+  L+Q LLD+PA+        +E LSIYKIP 
Sbjct: 1   MEKQPPLQVMVGRDDNIGDKADMVVRVKGTLDQ-LLDSPAILNMEAEQSSELLSIYKIPF 60

Query: 61  FMRQVQPKALFEPQLVSFGPYHHGESHLFRMELEKRQAFKNFQTRYGLPVEPIVERVWSM 120
           FM Q  PKA +EPQ+VS GPY+HG+ HL  MELEK + F +F+TR  L VE IV  V ++
Sbjct: 61  FMTQTHPKA-YEPQVVSLGPYNHGKQHLSPMELEKLKLFHSFKTRCLLDVESIVRGVSTI 120

Query: 121 LEDVQGCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLL 180
           L+++   YD LE EW  + G  KFLQLM++DGCFML  L++     L N+  DI +DMLL
Sbjct: 121 LDELMESYDRLEEEWTQDPG--KFLQLMIVDGCFMLGFLISCPNS-LINVSPDIKQDMLL 180

Query: 181 LENQLPMKLLEELHSMANHS 191
           LENQLPM LLE+L+S+A  +
Sbjct: 181 LENQLPMLLLEKLYSIAGRN 195

[Close]

BLAST of MS024480 vs. ExPASy Swiss-Prot
Match: Q9SD53 (UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.0e-11
Identity = 51/159 (32.08%), Postives = 82/159 (51.57%), Query Frame = 0


Query: 41  EGLSIYKIPHFMRQVQPKALFEPQLVSFGPYHHGESHLFRMELEK---RQAFKNFQTRYG 100
           E   I+++P     + PKA ++P++VS GPYH+GE HL  ++  K    Q F +   +  
Sbjct: 44  ESCCIFRVPESFVALNPKA-YKPKVVSIGPYHYGEKHLQMIQQHKPRLLQLFLDEAKKKD 103

Query: 101 LPVEPIVERVWSMLEDVQGCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGG-- 160
           +    +V+ V  + + ++  Y E     +L+ G    + +MVLDGCF+L V L  SG   
Sbjct: 104 VEENVLVKAVVDLEDKIRKSYSE-----ELKTG-HDLMFMMVLDGCFILMVFLIMSGNIE 163

Query: 161 ----------WLSNMREDIVRDMLLLENQLPMKLLEELH 185
                     WL +    I  D+LLLENQ+P  +L+ L+
Sbjct: 164 LSEDPIFSIPWLLS---SIQSDLLLLENQVPFFVLQTLY 192

[Close]

BLAST of MS024480 vs. ExPASy TrEMBL
Match: A0A6J1D5C0 (UPF0481 protein At3g47200-like OS=Momordica charantia OX=3673 GN=LOC111017450 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.4e-105
Identity = 192/193 (99.48%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNNESAVVIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKAL 60
           MERPPSMPIRIIKDNNESAVVIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKAL
Sbjct: 1   MERPPSMPIRIIKDNNESAVVIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKAL 60

Query: 61  FEPQLVSFGPYHHGESHLFRMELEKRQAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDE 120
           FEPQLVSFGPYHHGESHLFRMELEKR+AFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDE
Sbjct: 61  FEPQLVSFGPYHHGESHLFRMELEKRKAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDE 120

Query: 121 LEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLLLENQLPMKLL 180
           LEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLLLENQLPMKLL
Sbjct: 121 LEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLLLENQLPMKLL 180

Query: 181 EELHSMANHSYLK 194
           EELHSMANHSYLK
Sbjct: 181 EELHSMANHSYLK 193

[Close]

BLAST of MS024480 vs. ExPASy TrEMBL
Match: A0A6J1KYV8 (UPF0481 protein At3g47200-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497633 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 7.5e-38
Identity = 98/200 (49.00%), Postives = 136/200 (68.00%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNN---ESAVVIRVRENLNQLLLDTPAV-------EAEGLSIYKIPH 60
           ME+ P + + + +D+N   ++ +V+RV+  L+Q LLD+PA+        +E LSIYKIP 
Sbjct: 1   MEKQPPLQVMVGRDDNIGDKADMVVRVKGTLDQ-LLDSPAILNMEAEQSSELLSIYKIPF 60

Query: 61  FMRQVQPKALFEPQLVSFGPYHHGESHLFRMELEKRQAFKNFQTRYGLPVEPIVERVWSM 120
           FM Q  PKA +EPQ+VS GPY+HG+ HL  MELEK + F +F+TR  L VE IV  V ++
Sbjct: 61  FMTQTHPKA-YEPQVVSLGPYNHGKQHLSPMELEKLKLFHSFKTRCLLDVESIVRGVSTI 120

Query: 121 LEDVQGCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLL 180
           L+++   YD LE EW  + G  KFLQLM++DGCFML  L++     L N+  DI +DMLL
Sbjct: 121 LDELMESYDRLEEEWTQDPG--KFLQLMIVDGCFMLGFLISCPNS-LINVSPDIKQDMLL 180

Query: 181 LENQLPMKLLEELHSMANHS 191
           LENQLPM LLE+L+S+A  +
Sbjct: 181 LENQLPMLLLEKLYSIAGRN 195

[Close]

BLAST of MS024480 vs. ExPASy TrEMBL
Match: A0A6J1KVQ6 (UPF0481 protein At3g47200-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497633 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 7.5e-38
Identity = 98/200 (49.00%), Postives = 136/200 (68.00%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNN---ESAVVIRVRENLNQLLLDTPAV-------EAEGLSIYKIPH 60
           ME+ P + + + +D+N   ++ +V+RV+  L+Q LLD+PA+        +E LSIYKIP 
Sbjct: 1   MEKQPPLQVMVGRDDNIGDKADMVVRVKGTLDQ-LLDSPAILNMEAEQSSELLSIYKIPF 60

Query: 61  FMRQVQPKALFEPQLVSFGPYHHGESHLFRMELEKRQAFKNFQTRYGLPVEPIVERVWSM 120
           FM Q  PKA +EPQ+VS GPY+HG+ HL  MELEK + F +F+TR  L VE IV  V ++
Sbjct: 61  FMTQTHPKA-YEPQVVSLGPYNHGKQHLSPMELEKLKLFHSFKTRCLLDVESIVRGVSTI 120

Query: 121 LEDVQGCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLL 180
           L+++   YD LE EW  + G  KFLQLM++DGCFML  L++     L N+  DI +DMLL
Sbjct: 121 LDELMESYDRLEEEWTQDPG--KFLQLMIVDGCFMLGFLISCPNS-LINVSPDIKQDMLL 180

Query: 181 LENQLPMKLLEELHSMANHS 191
           LENQLPM LLE+L+S+A  +
Sbjct: 181 LENQLPMLLLEKLYSIAGRN 195

[Close]

BLAST of MS024480 vs. ExPASy TrEMBL
Match: A0A6J1H6V9 (UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111461034 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 9.8e-38
Identity = 97/198 (48.99%), Postives = 131/198 (66.16%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNN---ESAVVIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQP 60
           ME+ P + I++I+D+N      +VI+V E LN+  LD+P  +    SIYK+P FMRQ   
Sbjct: 10  MEKQPPLSIKLIRDDNVDKPDDMVIQVMECLNEPGLDSPTNKH---SIYKLPFFMRQTHS 69

Query: 61  KAL---FEPQLVSFGPYHHGESHLFRMELEKRQAFKNFQTRYGLPVEPIVERVWSMLEDV 120
           +A    F+PQ+VSFGPYHHG+ HL  ME +K +AF   +TR GLPVE IV  V ++L+D+
Sbjct: 70  EAFNKAFDPQVVSFGPYHHGKKHLSPMERQKAKAFNTLKTR-GLPVEAIVREVSTILDDL 129

Query: 121 QGCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLLLENQ 180
              YD LE EW  + G  KFL+LM++DGCFML  L  D    L NM+ DI  + LLLENQ
Sbjct: 130 LESYDRLEEEWTQDPG--KFLKLMIVDGCFMLR-LFCDCPASLINMKMDIRLETLLLENQ 189

Query: 181 LPMKLLEELHSMANHSYL 193
           LP+KLL +LHS+A   ++
Sbjct: 190 LPLKLLHKLHSIAGPIFI 200

[Close]

BLAST of MS024480 vs. ExPASy TrEMBL
Match: A0A6J1HB25 (UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111461183 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.3e-37
Identity = 98/200 (49.00%), Postives = 138/200 (69.00%), Query Frame = 0


Query: 1   MERPPSMPIRIIKDNN---ESAVVIRVRENLNQLLLDTPAV-------EAEGLSIYKIPH 60
           ME+ PS+ + + +D+N    + +V+RV+  L+Q LLD+PA+        +E LSIYKIP 
Sbjct: 1   MEKHPSLQVMLGRDDNIGDNADMVVRVKGTLDQ-LLDSPAILNMEAEQSSELLSIYKIPF 60

Query: 61  FMRQVQPKALFEPQLVSFGPYHHGESHLFRMELEKRQAFKNFQTRYGLPVEPIVERVWSM 120
           FM Q  PKA +EPQ+VS GPY+HG+ HL  MELEK + F +F+ R  L VE IV  V ++
Sbjct: 61  FMTQTHPKA-YEPQVVSLGPYNHGKQHLSPMELEKLKLFHSFKARCLLDVESIVRGVSTI 120

Query: 121 LEDVQGCYDELEGEWKLEDGAAKFLQLMVLDGCFMLEVLLADSGGWLSNMREDIVRDMLL 180
           L+++   YD+LE +WK + G  KFLQLM++DGCFML  L+ +    L N+  DI +DMLL
Sbjct: 121 LDELMESYDKLEEDWKEDPG--KFLQLMIVDGCFMLGFLI-NCPDSLINVSPDIKQDMLL 180

Query: 181 LENQLPMKLLEELHSMANHS 191
           LENQLPM LLE+L+S+A+ +
Sbjct: 181 LENQLPMLLLEKLYSIADRN 195

[Close]

BLAST of MS024480 vs. TAIR 10
Match: AT3G50130.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 93.6 bits (231), Expect = 2.0e-19
Identity = 53/176 (30.11%), Postives = 89/176 (50.57%), Query Frame = 0


Query: 21  VIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKALFEPQLVSFGPYHHGESHLFR 80
           VI +R+ + Q L +      + L IY++P ++++   K+ F PQ VS GP+HHG  HL  
Sbjct: 117 VISIRDKMEQALREDATTSWDKLCIYRVPQYLQENNKKSYF-PQTVSLGPFHHGNKHLLP 176

Query: 81  MELEKRQAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDELEGEWKLEDGAAKFLQLMVL 140
           M+  K +A      R    +E  ++ +  + +  + CY     E  ++  + KF +++VL
Sbjct: 177 MDRHKWRAVNMVMARTKHDIEMYIDAMKELEDRARACY-----EGPIDLSSNKFSEMLVL 236

Query: 141 DGCFMLEVLLADSGGW-------------LSNMREDIVRDMLLLENQLPMKLLEEL 184
           DGCF+LE+      G+             +      I RDM++LENQLP+ +L  L
Sbjct: 237 DGCFVLELFRGADEGFSELGYDRNDPVFAMRGSMHSIQRDMVMLENQLPLFVLNRL 286

[Close]

BLAST of MS024480 vs. TAIR 10
Match: AT3G50170.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 91.3 bits (225), Expect = 1.0e-18
Identity = 58/176 (32.95%), Postives = 87/176 (49.43%), Query Frame = 0


Query: 21  VIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKALFEPQLVSFGPYHHGESHLFR 80
           VI +R+ L Q   D        L IY++PH++++   K+ F PQ VS GPYHHG+  L  
Sbjct: 91  VISIRDKLEQADRDDDTTIWGKLCIYRVPHYLQENDKKSYF-PQTVSLGPYHHGKKRLRP 150

Query: 81  MELEKRQAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDELEGEWKLEDGAAKFLQLMVL 140
           ME  K +A      R    +E     +  + E  + CY   EG   L     +F +++VL
Sbjct: 151 MERHKWRALNKVLKRLKQRIEMYTNAMRELEEKARACY---EGPISLSRN--EFTEMLVL 210

Query: 141 DGCFMLEVLLADSGGW-------------LSNMREDIVRDMLLLENQLPMKLLEEL 184
           DGCF+LE+      G+             +  +   I RDM++LENQLP+ +L+ L
Sbjct: 211 DGCFVLELFRGTVEGFTEIGYARNDPVFAMRGLMHSIQRDMIMLENQLPLFVLDRL 260

[Close]

BLAST of MS024480 vs. TAIR 10
Match: AT3G50170.2 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 91.3 bits (225), Expect = 1.0e-18
Identity = 58/176 (32.95%), Postives = 87/176 (49.43%), Query Frame = 0


Query: 21  VIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKALFEPQLVSFGPYHHGESHLFR 80
           VI +R+ L Q   D        L IY++PH++++   K+ F PQ VS GPYHHG+  L  
Sbjct: 91  VISIRDKLEQADRDDDTTIWGKLCIYRVPHYLQENDKKSYF-PQTVSLGPYHHGKKRLRP 150

Query: 81  MELEKRQAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDELEGEWKLEDGAAKFLQLMVL 140
           ME  K +A      R    +E     +  + E  + CY   EG   L     +F +++VL
Sbjct: 151 MERHKWRALNKVLKRLKQRIEMYTNAMRELEEKARACY---EGPISLSRN--EFTEMLVL 210

Query: 141 DGCFMLEVLLADSGGW-------------LSNMREDIVRDMLLLENQLPMKLLEEL 184
           DGCF+LE+      G+             +  +   I RDM++LENQLP+ +L+ L
Sbjct: 211 DGCFVLELFRGTVEGFTEIGYARNDPVFAMRGLMHSIQRDMIMLENQLPLFVLDRL 260

[Close]

BLAST of MS024480 vs. TAIR 10
Match: AT3G50140.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 89.4 bits (220), Expect = 3.8e-18
Identity = 55/176 (31.25%), Postives = 88/176 (50.00%), Query Frame = 0


Query: 21  VIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKALFEPQLVSFGPYHHGESHLFR 80
           VI +++ + Q++ D      + + IY++P  +++    + F PQ VS GPYHHG+ HL  
Sbjct: 91  VIWIKDKMEQVMRDAATTSWDKICIYRVPLSLKKSDKNSYF-PQAVSLGPYHHGDEHLRP 150

Query: 81  MELEKRQAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDELEGEWKLEDGAAKFLQLMVL 140
           M+  K +A      R    +E  ++ +  + E  + CY   EG   L     KF Q++VL
Sbjct: 151 MDYHKWRAVNMVMKRTKQGIEMYIDAMKELEERARACY---EGPIGLSSN--KFTQMLVL 210

Query: 141 DGCFMLEVLLADSGGW-------------LSNMREDIVRDMLLLENQLPMKLLEEL 184
           DGCF+L++      G+             +      I RDML+LENQLP+ +L  L
Sbjct: 211 DGCFVLDLFRGAYEGFSKLGYDRNDPVFAMRGSMHSIRRDMLMLENQLPLFVLNRL 260

[Close]

BLAST of MS024480 vs. TAIR 10
Match: AT3G50180.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 89.0 bits (219), Expect = 5.0e-18
Identity = 57/176 (32.39%), Postives = 85/176 (48.30%), Query Frame = 0


Query: 21  VIRVRENLNQLLLDTPAVEAEGLSIYKIPHFMRQVQPKALFEPQLVSFGPYHHGESHLFR 80
           VI +++ L Q   +        L IYK+PH++     K+ F PQ VS GPYHHG      
Sbjct: 156 VISIKDKLEQAYRNDDRTSWGKLCIYKVPHYLHGNDKKSYF-PQTVSLGPYHHGRQQTQS 215

Query: 81  MELEKRQAFKNFQTRYGLPVEPIVERVWSMLEDVQGCYDELEGEWKLEDGAAKFLQLMVL 140
           ME  K +A      R    +E  ++ +  + E  + CY   EG   L     +F ++++L
Sbjct: 216 MECHKWRAVNMVLKRTNQGIEVFLDAMIELEEKARACY---EGSIVLSSN--EFTEMLLL 275

Query: 141 DGCFMLEVLLADSGGWLS-------------NMREDIVRDMLLLENQLPMKLLEEL 184
           DGCF+LE+L   + G+L                   I RDM++LENQLP+ +L  L
Sbjct: 276 DGCFILELLQGVNEGFLKLGYDHNDPVFAVRGSMHSIQRDMIMLENQLPLFVLNRL 325

The following BLAST results are available for this feature:

BLAST of MS024480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148888.1	5.0e-105	99.48	UPF0481 protein At3g47200-like [Momordica charantia]	[more]
XP_038875622.1	2.3e-41	53.85	UPF0481 protein At3g47200-like [Benincasa hispida]	[more]
KAG6592830.1	6.9e-38	49.49	UPF0481 protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023513985.1	1.2e-37	48.73	UPF0481 protein At3g47200-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004238.1	1.5e-37	49.00	UPF0481 protein At3g47200-like isoform X1 [Cucurbita maxima]	[more]

BLAST of MS024480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD53	2.0e-11	32.08	UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1	[more]

BLAST of MS024480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5C0	2.4e-105	99.48	UPF0481 protein At3g47200-like OS=Momordica charantia OX=3673 GN=LOC111017450 PE...	[more]
A0A6J1KYV8	7.5e-38	49.00	UPF0481 protein At3g47200-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1KVQ6	7.5e-38	49.00	UPF0481 protein At3g47200-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1H6V9	9.8e-38	48.99	UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111461034 PE=...	[more]
A0A6J1HB25	1.3e-37	49.00	UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111461183 PE=...	[more]

BLAST of MS024480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50130.1	2.0e-19	30.11	Plant protein of unknown function (DUF247)	[more]
AT3G50170.1	1.0e-18	32.95	Plant protein of unknown function (DUF247)	[more]
AT3G50170.2	1.0e-18	32.95	Plant protein of unknown function (DUF247)	[more]
AT3G50140.1	3.8e-18	31.25	Plant protein of unknown function (DUF247)	[more]
AT3G50180.1	5.0e-18	32.39	Plant protein of unknown function (DUF247)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004158	Protein of unknown function DUF247, plant	PFAM	PF03140	DUF247	coord: 45..192 e-value: 7.8E-35 score: 120.9
IPR004158	Protein of unknown function DUF247, plant	PANTHER	PTHR31549	PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED	coord: 37..195
None	No IPR available	PANTHER	PTHR31549:SF210	PROTEIN, PUTATIVE (DUF247)-RELATED	coord: 37..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS024480.1	MS024480.1	mRNA