MS024352 (gene) Bitter gourd (TR) v1

Overview
NameMS024352
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAlcohol dehydrogenase
Locationscaffold318: 705775 .. 711727 (+)
RNA-Seq ExpressionMS024352
SyntenyMS024352
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTTACCACCAAGAGCTGGAAAGGCTCACGAGGAACCTTTTATAAGAGAGGTACAATTTGGCGGTGGACATCATTTGGTGACCATGGGATTAGGTGCAAGCCTTAAAAAGCTCTGGGCGTTTAGGTATTGGGAATCAACTTACCAGGATCCTAGCTCTAATGGTTAGATAGCTTTGGGGATTAAATATTTCCACTTGGGAGGTCACCCTTATGGCGTATTGCCTTATGACGAAATTCTGGTAGGTTGGATTCTTTGCTGTTTGGTGGGGAAGAATTAGAAGAATATTTTTAGGGCTTGATAGATCTTGGGAGGATGTGTGGGGTTTGGTGCATTTTGATGCTTCACTTCGGGCTTCTAACTCAAATTTGTTTTGTAATTACACTTCCTTTTTTATTACCAGAAGTTGGGGGTTCTTTTGTACAAGTTTTTTGCGCTTCCCACTTTTGGCCTGGCGTTTTCTATGACAGGCCTTCTTTTACTTTCCTTCATTTTATAGAAAGTTTGTTTCGCTTTAAAAATTTGAGGATCAAGTTGGTTGTAGAACAACTGTTTTTCAATTTTCAGTCATCATGTATACCGTTGCAATGCAATCCATACCAAGTTTAGTGTAAAGTATGATCAAGAAAATAATGATAAAATAGTGCTATTATTTTACAACTAAAAGTCAATCACTTTGATAAGCAAGATGTATTTTATTTAATTTGGATTGGAAATAATTTCATTGATAGAATGAAATTACAAAAGAGGGGACGAAAGCCAACCCCTAACATTTTGATGTCATTAGTTCAATACCTCTTCTAGCCAACTGGTACCCACCTAAGATTTGAAATAATTTACAAGTCTTTTGAATGCTGAATGTCATATAATGTTCATATTAAATTTTAAGTTTTCTGATGTTCATTTCTTTTCAGGACCCTGAAGGTCTCTTCCCCTGTATTCTTGGTCATGAGGCTGCAGGGTATGCAATTTTTTTAAAAGTCAGATCCCAGATATTATGGTTTTTAGTACACACACACATATATACACACACACACACACCATGTTACACATGGTCTGAAATTCTTCCTCTGTATGCTTAACATTATTGCTCAAGCGCCAAGCGGCATGTTACACCCATGGGCAGGATAGTTGAGAGTGTTGGTGAAGGTGTGACTGAAGTTCAGCCTGGAGACCATGTCATTCCTTGTTACCAAGCAGAATGTCGAGAATGCAAGTTCTGCAAATCAGGGAAAACAAACCTCTGTGGCAAAGTTCGTGCTGCCACTGGAGTTGGAGTAATGATGTCAGATCGCCAGAGTCGTTTCTCCATAAATGGAAAGCCTATATATCACTTCATGGGAACGTCGACATTTAGTCAATACACTGTTGTTCATGATGTCAGTGTTGCAAAGATTGACCCAAAAGCTCCTTTAGATAAAGTATGCCTTCTTGGATGTGGCGTTCCTACAGGTATAACTTGCATCAAAATCAATTACGTCTCTAGTTGGATTATTTCTGCACTCAACTTTCATCAAATAAAAGAATAAAATGAAGTAAAAAGGCCAAAAAGAAAAACTAACGATTCCACCGATAAAATGGGTACCAAAAAGTAAGAAAATTACGTAAAGCGATTGAATTGTTGGTGGTAAAAAATAAAGGGAAATGACAAAAAAGACTTGATTCAAGGACCCAAAGAGAAGCTTTTAGACGAGTCAGACTCAAGGCATCCTCCCAAGATTCTTCTACACATGCACAAAAGAGAGAATAAAAAGACTCCTACTCTCTGACCCCAAGTAGTTCAAGAAATTGCAAAAAGACCAGCTTGGGATAACACTCTTTGTGGAGCTCTCTTATTTCTGTTATTATTTCTTTGATTTATACCAATTATGGTAGTTTTTAAATCTCCCCATTGAGTATTATTGTTCACCCTTTCTGTATTATTCAATATTCAATTTTTTTTTTATCTAAAAAAATTAAAACGAGATAAAATCTCAATAAGTAAAGGAAATAAGTTAGACAAATTACATTCTCATATTTCTTCTGAAACCAAAAGTTTCATATTTATTTTACATACTGTTTCAGGATAATTTACAACTTTAATCATTCTAAGATGCAAAACCTTTTTGTCTAACATGTCCACGAGATATTCAAATTTTCCTTTGAGTGTAGAAGACCTGTAGAACTTGTTCTGACATAAGCCTTATTGGATAACTCCATACATGTACATACAAACTGTATTAATGATAGGGCAAGGTCATCGAATCATGGTCGCACAAAGAATATTACTTAATTTTTAAATTTCTCTTAGTTGTAAAAATTCATTTCTTCATCTTATTAGAAACGACACTGTTACTTTAACAACTAGCATAATTGTCCTGTTTTAGCTATGAAAAGTTAGAAAAAAAAAATGTAGGAAGATTTTAGATGGACATGGTTGCTGTGGTGTTTTCTATCTAAGGAAAGAAGTGAGCTGGTGTTATTTTTGTTTTTCTGTTTTTCTGGTTTACTCATTTCTTTTGAATGAGGGGGCATTGTTCTCATTAAGTAATATCTTACAGGTAAATTATTTTAAATTTATTATTTCATTTGCTGTAGCATATGCTATTTTCAGGTCTTGGAGCTGTTTGGAACACGGCAAAAGTAGAGCCAGGGTCCAATGTTGCTATTTTTGGCCTAGGGACTGTAGGCCTCGCTGTAAGCTTCATATCAGACCTTCCTGTTCTTTTGACTGCCCCCTCTTGACCTCGGTTTGAGTCTAATTTAGCATGGATTTCTTCACGACTTATGTTTTGTCAATGTTTTAAAAGGATATTCAGGTTTAACAAGGTCCAAGGTGAAACTCAATTTTTATGCCTCAGTTTACATTTTCAGTTTTTCAGAGGCTTGCAGCCCTTATAGACAAGAGGCGTACGCCTCCATTGCAAGGCATCTAGGCTTATAGTCATAGGCAATAGGTAGATGGCCTCACATGATAGCTACAAGAATAATACTGACTATTCATATTTTGAAATATAAAACCAACTAATGCATGTATATCTCTGTTTCTTGTATAGAAAAAAAAAAAATTAATGCATGTAGATATATAACACTAAAGATACTTTTACCACAGGCTAAGAATAGATGCAAAAGACTAGAAGTAAGGAACGTACTGATGTTTGTGACAAAAATTAAGATGTGGAGAATAGAATCTTTATTTAAAAAAAAAATACAATTGATGACGAGTTTTCCGTCCTACTTTAAGCATTTATATCAAAGCTTATGCCTTAGCAGAGCCCGGCAGTCTTTAGCATTCTTAAACATTGGTGTTTGCAGTGGATTGATTGCTGTAAGCTATTTCTTCACGAACCAAGAAACATGACCTAGTCCCCTTCATTTCTATACCTTCTTTCCTTATCTACCAAATTGTTTCTCTGGCTAAAAGCATCGATTTCTTTGTTACCTAAAATTTTACAGGTTGCAGAAGGTGCCAAAGCAGCTGGTGCCTCTCGTATAATTGGCATTGATATTGACAACAAAAAGTTTGAAATCGGTATACCTTGATTACTTACATCTTATGCTTTATTTCTTGAATTTATAATCTAAGGAAAGTTGTTGTGAAGCATATTATAGTCTTCGAGGATTGTGGTTCTATTTTACATTTCATTATGGTCAGATCTTGTAACTGTTCCACGATTTATGAGTAATATTTTTTTCGTTAACATATATTTCTTGAATATGCTTCTGGAAGTAACTTTTTATTAAATGTATGTCTATATGGTCAAACAATCAACTTTTCTATGGCACAACAAACTCTCTGGCATAACATAACGGTTTCTTTTCCTATTATATATTTTAAACGTTATAATACTATACTATGTTGAATTTATTTATTGTTGAAAAATGAAAATCCATATTTCAAGAAAATTATCTCTCCAAAGTTTAACCAGTTAGTTTTATAGTTGCTTTGAGGATAAGGAGTTCATAATTTTGTGTTCTTTCTTATTCAATCTGATTGAATTGCTCCTCATTGAACTTGTCCTTTTCTTGTTTTTGCTTTTTGTCTTTTTCTATCGCTCCTTCTAGGGCTGGTATCTTGAGCAATTTTCCTTTCCTTAAAAAAAAATTATTGTCTGCATGTCATAAAGTGATATATTTGAAACAACAGGTCCTTGTTATCTAGCAAAGGAATGGAAACATGGAATCAACACTAACATAAATGGAGGATGACATTTGTCAATCTGATCTTTTTATATTCAGTTTTTTGTTTTCTATTCTTCTTTTTCCAATTTACCTCTTTGTTTGAACATAACTAGATTATGCCTTAACTACCAAATTTTCCCTGTATCTCATCAGTAGTTTGATAATGTTTGGTTCCTTAATCTTTACTATTTTTGTGACCACGAGGATAGATATTAAGTAATGATGCATTTTACTAATTTTGTTTGATTTAAGTGGTAACTTTCCCTAGCTTTTTTAACGCCTTTATCTGAAGTTTGGGATATGAACATCCATTCAAACAGATTTAAGCTCTTCTTTATCTGCGGTTAGAAAGGAACAGGAGGTCTTTTGAGGATATTTCTTACAATTTAGCTAATCTTTTGAGTATTGTACAGCTCACAACCTCTAGGTGGTGCTATACTTGGAGCAAATTTTTTTTTAAACTATGATACTTCAAAATTAGAAGGTTTTTTGACTTAGCTTCCTGATCCTTCAAAATTAGAAGGCTTTTTTGACTCAGCTTCCTGGGAGGTGGTCCCCTCTTCCTCCTGCCCTTAGCTTAGCCTCGGTTTTTTTTTTCTCTTTTTGTGAGTAATACATCTTNNNNNNNNNNNNGAAAAAAAAAAAAAAAGAGCTAACAGTGTATAGTAAGATTTGCACTTTCTTCAATGATTCTTGAGGGGTCAATGAGGTGTTTTTTATGACATTATTTACCGATACCTTGCAGCTAAGAAATTTGGAGCGACTGAATTTGTGAACCCAAAGGAACACGACAAACCAATTCAGCAGGTAATTGTTGATCTGACAGATGGCGGTGTTGACTATAGTTTTGAGTGCATAGGGAATGTCTCTGTGATGAGGTCTGCTCTGGAATGCTGCCACAAGGCAAGTGTTATAACCTATAACAGATCTTATTTCGTTGATAGATCATTGAAGTAGCTTTTTACATTTGTAAACATGTGTGATTTTGTGATGCATCTTCCTAACAGGGATGGGGAGAATCAGTCATTGTGGGGGTTGCAGCGTCTGGCCAGGAAATATCAACAAGGCCTTTCCAGTTGGTGACTGGTCGTGTCTGGAAAGGAACAGCCTTTGGTGGTTTCAAGAGTCGTTCTCAAGTGCCTTGGCTTGTTGAAAAGTACTTGAAGAAGGTATTTAGCGACTGTTGACCATTTTGTTTTTCGTTATCTTTTTAAAAAATAAGCTCGTCTACTAACAATTTACAACTGCCTTGTTTTCTAATTTACTTTCTAAATACGTCCTTCAATTTTGGTTAAGGCTTAGTGTCTGTTTAGTCCTATATCTTCAGATGAATCTAATAGGTGCGGTAGATTTCAATTTTTTGTCTATAATAGATTTATGTTGCTAACTCCATTAGTTTAACGCTTCACTATCAAATACCTAAATTTTCTCGAGATTAGCCTCCCACGTAGTCTTTAAATATAACCATTAGCTGCCACATAAACGGTAAACCAATGGAATTAACTTCAAGGATCCATTTAACATAAAATTGAAAGTTTAAGGACCGGTTAAAAACCTTTTAAAAGTAACCAAATAGATACCATCTTGAAAATTAGAGACCTGCATGAAAGTTTAGGTACCAAACTTCTTATTTAACCTTTAAAAGTTACAACTGATCTCATCCATGGTTGCAGGAAATCAAAGTTGATGAATACATAACTCACAATTTGACCTTGGAAGAGATCAACAAAGCGTTTGATCTGATGCATGGAGGCGACTGCCTGCGCTGCGTTCTTTCTGCCCATCCCTAA

mRNA sequence

ATGTTGTTACCACCAAGAGCTGGAAAGGCTCACGAGGAACCTTTTATAAGAGAGGACCCTGAAGGTCTCTTCCCCTGTATTCTTGGTCATGAGGCTGCAGGAGCCCGGCAGTCTTTAGCATTCTTAAACATTGGTGTTTGCAGTGGATTGATTGCTGTTGCAGAAGGTGCCAAAGCAGCTGGTGCCTCTCGTATAATTGGCATTGATATTGACAACAAAAAGTTTGAAATCGCGTCTGGCCAGGAAATATCAACAAGGCCTTTCCAGTTGGTGACTGGTCGTGTCTGGAAAGGAACAGCCTTTGGTGGTTTCAAGAGTCGTTCTCAAGTGCCTTGGCTTGTTGAAAAGTACTTGAAGAAGGAAATCAAAGTTGATGAATACATAACTCACAATTTGACCTTGGAAGAGATCAACAAAGCGTTTGATCTGATGCATGGAGGCGACTGCCTGCGCTGCGTTCTTTCTGCCCATCCCTAA

Coding sequence (CDS)

ATGTTGTTACCACCAAGAGCTGGAAAGGCTCACGAGGAACCTTTTATAAGAGAGGACCCTGAAGGTCTCTTCCCCTGTATTCTTGGTCATGAGGCTGCAGGAGCCCGGCAGTCTTTAGCATTCTTAAACATTGGTGTTTGCAGTGGATTGATTGCTGTTGCAGAAGGTGCCAAAGCAGCTGGTGCCTCTCGTATAATTGGCATTGATATTGACAACAAAAAGTTTGAAATCGCGTCTGGCCAGGAAATATCAACAAGGCCTTTCCAGTTGGTGACTGGTCGTGTCTGGAAAGGAACAGCCTTTGGTGGTTTCAAGAGTCGTTCTCAAGTGCCTTGGCTTGTTGAAAAGTACTTGAAGAAGGAAATCAAAGTTGATGAATACATAACTCACAATTTGACCTTGGAAGAGATCAACAAAGCGTTTGATCTGATGCATGGAGGCGACTGCCTGCGCTGCGTTCTTTCTGCCCATCCCTAA

Protein sequence

MLLPPRAGKAHEEPFIREDPEGLFPCILGHEAAGARQSLAFLNIGVCSGLIAVAEGAKAAGASRIIGIDIDNKKFEIASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKEIKVDEYITHNLTLEEINKAFDLMHGGDCLRCVLSAHP
Homology
[Close]
BLAST of MS024352 vs. NCBI nr
Match: XP_022157518.1 (alcohol dehydrogenase class-3 [Momordica charantia])

HSP 1 Score: 193.0 bits (489), Expect = 2.0e-45
Identity = 107/172 (62.21%), Postives = 108/172 (62.79%), Query Frame = 0 

Query: 51  IAVAEGAKAAGASRIIGIDIDNKKFEI--------------------------------- 110
           +AVAEGAKAAGASRIIGIDIDNKKFEI                                 
Sbjct: 208 LAVAEGAKAAGASRIIGIDIDNKKFEIAKKFGATEFVNPKEHDKPIQQVIVDLTDGGVDY 267

Query: 111 -------------------------------ASGQEISTRPFQLVTGRVWKGTAFGGFKS 159
                                          ASGQEISTRPFQLVTGRVWKGTAFGGFKS
Sbjct: 268 SFECIGNVSVMRSALECCHKGWGESVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327

[Close]
BLAST of MS024352 vs. NCBI nr
Match: XP_004140582.1 (alcohol dehydrogenase class-3 [Cucumis sativus] >KGN46364.1 hypothetical protein Csa_005038 [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 2.0e-45
Identity = 107/172 (62.21%), Postives = 108/172 (62.79%), Query Frame = 0 

Query: 51  IAVAEGAKAAGASRIIGIDIDNKKFEI--------------------------------- 110
           +AVAEGAKAAGASRIIGIDIDNKKFEI                                 
Sbjct: 208 LAVAEGAKAAGASRIIGIDIDNKKFEIAKKFGANEFVNPKEHDKPIQQVIVDLTDGGVDY 267

Query: 111 -------------------------------ASGQEISTRPFQLVTGRVWKGTAFGGFKS 159
                                          ASGQEISTRPFQLVTGRVWKGTAFGGFKS
Sbjct: 268 SFECIGNVNVMRSALECCHKGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327

[Close]
BLAST of MS024352 vs. NCBI nr
Match: KAG7025257.1 (Alcohol dehydrogenase class-3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 192.6 bits (488), Expect = 2.6e-45
Identity = 103/148 (69.59%), Postives = 105/148 (70.95%), Query Frame = 0 

Query: 51  IAVAEGAKAAGASRIIGIDIDNKKFEI--------------------------------- 110
           +AVAEGAKAAGASRIIGIDID+K  EI                                 
Sbjct: 208 LAVAEGAKAAGASRIIGIDIDSKNKEIWSDLKFVTQGNEKQFSRSSDWCVHASSYQGWGQ 267

Query: 111 -------ASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKEIKVDEYITH 159
                  ASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKEIKVDEYITH
Sbjct: 268 SVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKEIKVDEYITH 327

[Close]
BLAST of MS024352 vs. NCBI nr
Match: XP_008459982.1 (PREDICTED: alcohol dehydrogenase class-3 [Cucumis melo])

HSP 1 Score: 191.0 bits (484), Expect = 7.6e-45
Identity = 106/172 (61.63%), Postives = 108/172 (62.79%), Query Frame = 0 

Query: 51  IAVAEGAKAAGASRIIGIDIDNKKFEI--------------------------------- 110
           +AVAEGAKAAGASRIIGIDID+KKFEI                                 
Sbjct: 208 LAVAEGAKAAGASRIIGIDIDSKKFEIAKQFGANEFVNPKEHDKPIQQVIVDLTDGGVDY 267

Query: 111 -------------------------------ASGQEISTRPFQLVTGRVWKGTAFGGFKS 159
                                          ASGQEISTRPFQLVTGRVWKGTAFGGFKS
Sbjct: 268 SFECIGNVNVMRSALECCHKGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327

[Close]
BLAST of MS024352 vs. NCBI nr
Match: XP_038876338.1 (alcohol dehydrogenase class-3 [Benincasa hispida])

HSP 1 Score: 190.7 bits (483), Expect = 9.9e-45
Identity = 105/172 (61.05%), Postives = 108/172 (62.79%), Query Frame = 0 

Query: 51  IAVAEGAKAAGASRIIGIDIDNKKFEI--------------------------------- 110
           +AVAEGAKAAGASRIIGIDID+KKFEI                                 
Sbjct: 208 LAVAEGAKAAGASRIIGIDIDSKKFEIAKKFGANEFVNPKEHDKPIQQVIIDLTDGGVDY 267

Query: 111 -------------------------------ASGQEISTRPFQLVTGRVWKGTAFGGFKS 159
                                          ASGQEISTRPFQLVTGRVWKGTAFGGFKS
Sbjct: 268 SFECIGNVNVMRSALECCHKGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327

[Close]
BLAST of MS024352 vs. ExPASy Swiss-Prot
Match: P80572 (Alcohol dehydrogenase class-3 OS=Pisum sativum OX=3888 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.9e-41
Identity = 94/171 (54.97%), Postives = 101/171 (59.06%), Query Frame = 0 

Query: 51  IAVAEGAKAAGASRIIGIDIDNKKFE---------------------------------- 110
           +AVAEGAK+AGASRIIGIDID+ K++                                  
Sbjct: 207 LAVAEGAKSAGASRIIGIDIDSNKYDTAKNFGVTEFINPKDHEKPIQQVIIDLTDGGVDY 266

Query: 111 ------------------------------IASGQEISTRPFQLVTGRVWKGTAFGGFKS 158
                                          ASGQEISTRPFQLVTGRVWKGTAFGGFKS
Sbjct: 267 SFECLGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 326


HSP 2 Score: 42.0 bits (97), Expect = 7.5e-03
Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 0 

Query: 18 EDPEGLFPCILGHEAAGARQSL 40
          +DPEGLFPCILGHEAAG  +S+
Sbjct: 56 KDPEGLFPCILGHEAAGIVESV 77

[Close]
BLAST of MS024352 vs. ExPASy Swiss-Prot
Match: Q96533 (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana OX=3702 GN=ADH2 PE=1 SV=2)

HSP 1 Score: 163.3 bits (412), Expect = 2.2e-39
Identity = 92/168 (54.76%), Postives = 98/168 (58.33%), Query Frame = 0 

Query: 51  IAVAEGAKAAGASRIIGIDIDNKKFE---------------------------------- 110
           +AVAEGAK AGASRIIGIDID+KK+E                                  
Sbjct: 208 LAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDY 267

Query: 111 ------------------------------IASGQEISTRPFQLVTGRVWKGTAFGGFKS 155
                                          ASGQEISTRPFQLVTGRVWKGTAFGGFKS
Sbjct: 268 SFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327


HSP 2 Score: 42.0 bits (97), Expect = 7.5e-03
Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 0 

Query: 18 EDPEGLFPCILGHEAAGARQSL 40
          +DPEGLFPCILGHEAAG  +S+
Sbjct: 57 KDPEGLFPCILGHEAAGIVESV 78

[Close]
BLAST of MS024352 vs. ExPASy Swiss-Prot
Match: A2XAZ3 (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica OX=39946 GN=ADHIII PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 4.9e-39
Identity = 89/169 (52.66%), Postives = 100/169 (59.17%), Query Frame = 0 

Query: 51  IAVAEGAKAAGASRIIGIDIDNKKFEI--------------------------------- 110
           +AVAEGAK+AGASRIIGIDID+KKF++                                 
Sbjct: 210 LAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDY 269

Query: 111 -------------------------------ASGQEISTRPFQLVTGRVWKGTAFGGFKS 156
                                          ASGQEISTRPFQLVTGRVWKGTAFGGFKS
Sbjct: 270 SFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 329


HSP 2 Score: 42.0 bits (97), Expect = 7.5e-03
Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 0 

Query: 18 EDPEGLFPCILGHEAAGARQSL 40
          +DPEGLFPCILGHEAAG  +S+
Sbjct: 59 KDPEGLFPCILGHEAAGIVESV 80

[Close]
BLAST of MS024352 vs. ExPASy Swiss-Prot
Match: Q0DWH1 (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 4.9e-39
Identity = 89/169 (52.66%), Postives = 100/169 (59.17%), Query Frame = 0 

Query: 51  IAVAEGAKAAGASRIIGIDIDNKKFEI--------------------------------- 110
           +AVAEGAK+AGASRIIGIDID+KKF++                                 
Sbjct: 210 LAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDY 269

Query: 111 -------------------------------ASGQEISTRPFQLVTGRVWKGTAFGGFKS 156
                                          ASGQEISTRPFQLVTGRVWKGTAFGGFKS
Sbjct: 270 SFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 329


HSP 2 Score: 42.0 bits (97), Expect = 7.5e-03
Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 0 

Query: 18 EDPEGLFPCILGHEAAGARQSL 40
          +DPEGLFPCILGHEAAG  +S+
Sbjct: 59 KDPEGLFPCILGHEAAGIVESV 80

[Close]
BLAST of MS024352 vs. ExPASy Swiss-Prot
Match: P93629 (Alcohol dehydrogenase class-3 OS=Zea mays OX=4577 GN=FDH PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-38
Identity = 88/169 (52.07%), Postives = 99/169 (58.58%), Query Frame = 0 

Query: 51  IAVAEGAKAAGASRIIGIDIDNKKFEI--------------------------------- 110
           +AVAEGAKAAGASR+IGIDIDNKKF++                                 
Sbjct: 210 LAVAEGAKAAGASRVIGIDIDNKKFDVAKNFGVTEFVNPKEHDKPIQQVLVDLTDGGVDY 269

Query: 111 -------------------------------ASGQEISTRPFQLVTGRVWKGTAFGGFKS 156
                                          ASGQEISTRPFQLVTGRVWKGTAFGGFKS
Sbjct: 270 SFECIGNVSIMRAALECSDKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 329


HSP 2 Score: 42.0 bits (97), Expect = 7.5e-03
Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 0 

Query: 18 EDPEGLFPCILGHEAAGARQSL 40
          +DPEGLFPCILGHEAAG  +S+
Sbjct: 59 KDPEGLFPCILGHEAAGIVESV 80

[Close]
BLAST of MS024352 vs. ExPASy TrEMBL
Match: A0A0A0KBZ1 (S-(hydroxymethyl)glutathione dehydrogenase OS=Cucumis sativus OX=3659 GN=Csa_6G087920 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 9.7e-46
Identity = 107/172 (62.21%), Postives = 108/172 (62.79%), Query Frame = 0 

Query: 51  IAVAEGAKAAGASRIIGIDIDNKKFEI--------------------------------- 110
           +AVAEGAKAAGASRIIGIDIDNKKFEI                                 
Sbjct: 208 LAVAEGAKAAGASRIIGIDIDNKKFEIAKKFGANEFVNPKEHDKPIQQVIVDLTDGGVDY 267

Query: 111 -------------------------------ASGQEISTRPFQLVTGRVWKGTAFGGFKS 159
                                          ASGQEISTRPFQLVTGRVWKGTAFGGFKS
Sbjct: 268 SFECIGNVNVMRSALECCHKGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327

[Close]
BLAST of MS024352 vs. ExPASy TrEMBL
Match: A0A6J1DTJ7 (S-(hydroxymethyl)glutathione dehydrogenase OS=Momordica charantia OX=3673 GN=LOC111024194 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 9.7e-46
Identity = 107/172 (62.21%), Postives = 108/172 (62.79%), Query Frame = 0 

Query: 51  IAVAEGAKAAGASRIIGIDIDNKKFEI--------------------------------- 110
           +AVAEGAKAAGASRIIGIDIDNKKFEI                                 
Sbjct: 208 LAVAEGAKAAGASRIIGIDIDNKKFEIAKKFGATEFVNPKEHDKPIQQVIVDLTDGGVDY 267

Query: 111 -------------------------------ASGQEISTRPFQLVTGRVWKGTAFGGFKS 159
                                          ASGQEISTRPFQLVTGRVWKGTAFGGFKS
Sbjct: 268 SFECIGNVSVMRSALECCHKGWGESVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327

[Close]
BLAST of MS024352 vs. ExPASy TrEMBL
Match: A0A1S3CB00 (S-(hydroxymethyl)glutathione dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103498931 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.7e-45
Identity = 106/172 (61.63%), Postives = 108/172 (62.79%), Query Frame = 0 

Query: 51  IAVAEGAKAAGASRIIGIDIDNKKFEI--------------------------------- 110
           +AVAEGAKAAGASRIIGIDID+KKFEI                                 
Sbjct: 208 LAVAEGAKAAGASRIIGIDIDSKKFEIAKQFGANEFVNPKEHDKPIQQVIVDLTDGGVDY 267

Query: 111 -------------------------------ASGQEISTRPFQLVTGRVWKGTAFGGFKS 159
                                          ASGQEISTRPFQLVTGRVWKGTAFGGFKS
Sbjct: 268 SFECIGNVNVMRSALECCHKGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327

[Close]
BLAST of MS024352 vs. ExPASy TrEMBL
Match: A0A6J1JR82 (S-(hydroxymethyl)glutathione dehydrogenase OS=Cucurbita maxima OX=3661 GN=LOC111488173 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 6.3e-45
Identity = 105/172 (61.05%), Postives = 108/172 (62.79%), Query Frame = 0 

Query: 51  IAVAEGAKAAGASRIIGIDIDNKKFEI--------------------------------- 110
           +AVAEGAKAAGASRIIGIDID+KKFE+                                 
Sbjct: 208 LAVAEGAKAAGASRIIGIDIDSKKFELAKKFGANEFVNPKEHDKPIQQVIVDLTDGGVDY 267

Query: 111 -------------------------------ASGQEISTRPFQLVTGRVWKGTAFGGFKS 159
                                          ASGQEISTRPFQLVTGRVWKGTAFGGFKS
Sbjct: 268 SFECIGNVNVMRSALECCHKGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327

[Close]
BLAST of MS024352 vs. ExPASy TrEMBL
Match: A0A6J1GRL8 (S-(hydroxymethyl)glutathione dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111456401 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.1e-44
Identity = 104/172 (60.47%), Postives = 108/172 (62.79%), Query Frame = 0 

Query: 51  IAVAEGAKAAGASRIIGIDIDNKKFEI--------------------------------- 110
           +AVAEGAKAAGASRIIGIDID+KKFE+                                 
Sbjct: 208 LAVAEGAKAAGASRIIGIDIDSKKFELAKKFGANEFVNPKEHDKPIQQVIVDLTDGGVDY 267

Query: 111 -------------------------------ASGQEISTRPFQLVTGRVWKGTAFGGFKS 159
                                          ASGQEISTRPFQLVTGRVWKGTAFGGFKS
Sbjct: 268 SFECIGNVNVMRSALECCHKGWGQSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327

[Close]
BLAST of MS024352 vs. TAIR 10
Match: AT5G43940.1 (GroES-like zinc-binding dehydrogenase family protein )

HSP 1 Score: 163.3 bits (412), Expect = 1.6e-40
Identity = 92/168 (54.76%), Postives = 98/168 (58.33%), Query Frame = 0 

Query: 51  IAVAEGAKAAGASRIIGIDIDNKKFE---------------------------------- 110
           +AVAEGAK AGASRIIGIDID+KK+E                                  
Sbjct: 208 LAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDY 267

Query: 111 ------------------------------IASGQEISTRPFQLVTGRVWKGTAFGGFKS 155
                                          ASGQEISTRPFQLVTGRVWKGTAFGGFKS
Sbjct: 268 SFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327


HSP 2 Score: 42.0 bits (97), Expect = 5.3e-04
Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 0 

Query: 18 EDPEGLFPCILGHEAAGARQSL 40
          +DPEGLFPCILGHEAAG  +S+
Sbjct: 57 KDPEGLFPCILGHEAAGIVESV 78

[Close]
BLAST of MS024352 vs. TAIR 10
Match: AT5G43940.2 (GroES-like zinc-binding dehydrogenase family protein )

HSP 1 Score: 163.3 bits (412), Expect = 1.6e-40
Identity = 92/168 (54.76%), Postives = 98/168 (58.33%), Query Frame = 0 

Query: 51  IAVAEGAKAAGASRIIGIDIDNKKFE---------------------------------- 110
           +AVAEGAK AGASRIIGIDID+KK+E                                  
Sbjct: 220 LAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDY 279

Query: 111 ------------------------------IASGQEISTRPFQLVTGRVWKGTAFGGFKS 155
                                          ASGQEISTRPFQLVTGRVWKGTAFGGFKS
Sbjct: 280 SFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 339


HSP 2 Score: 42.0 bits (97), Expect = 5.3e-04
Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 0 

Query: 18 EDPEGLFPCILGHEAAGARQSL 40
          +DPEGLFPCILGHEAAG  +S+
Sbjct: 69 KDPEGLFPCILGHEAAGIVESV 90

[Close]
BLAST of MS024352 vs. TAIR 10
Match: AT5G24760.1 (GroES-like zinc-binding dehydrogenase family protein )

HSP 1 Score: 90.1 bits (222), Expect = 1.7e-18
Identity = 40/73 (54.79%), Postives = 54/73 (73.97%), Query Frame = 0 

Query: 82  EISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKEIKVDEYITHNLTLEEINKAF 141
           E+S      ++G+  KGT FGG+K +S +P L++KY+ KEI +DE+ITHNL+ +EINKAF
Sbjct: 305 EVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAF 364

Query: 142 DLMHGGDCLRCVL 155
            LM  G CLRCVL
Sbjct: 365 VLMREGKCLRCVL 377

[Close]
BLAST of MS024352 vs. TAIR 10
Match: AT5G24760.2 (GroES-like zinc-binding dehydrogenase family protein )

HSP 1 Score: 90.1 bits (222), Expect = 1.7e-18
Identity = 40/73 (54.79%), Postives = 54/73 (73.97%), Query Frame = 0 

Query: 82  EISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKEIKVDEYITHNLTLEEINKAF 141
           E+S      ++G+  KGT FGG+K +S +P L++KY+ KEI +DE+ITHNL+ +EINKAF
Sbjct: 276 EVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAF 335

Query: 142 DLMHGGDCLRCVL 155
            LM  G CLRCVL
Sbjct: 336 VLMREGKCLRCVL 348

[Close]
BLAST of MS024352 vs. TAIR 10
Match: AT5G24760.3 (GroES-like zinc-binding dehydrogenase family protein )

HSP 1 Score: 90.1 bits (222), Expect = 1.7e-18
Identity = 40/73 (54.79%), Postives = 54/73 (73.97%), Query Frame = 0 

Query: 82  EISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKEIKVDEYITHNLTLEEINKAF 141
           E+S      ++G+  KGT FGG+K +S +P L++KY+ KEI +DE+ITHNL+ +EINKAF
Sbjct: 276 EVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAF 335

Query: 142 DLMHGGDCLRCVL 155
            LM  G CLRCVL
Sbjct: 336 VLMREGKCLRCVL 348

The following BLAST results are available for this feature:
BLAST of MS024352 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022157518.12.0e-4562.21alcohol dehydrogenase class-3 [Momordica charantia][more]
XP_004140582.12.0e-4562.21alcohol dehydrogenase class-3 [Cucumis sativus] >KGN46364.1 hypothetical protein... [more]
KAG7025257.12.6e-4569.59Alcohol dehydrogenase class-3 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_008459982.17.6e-4561.63PREDICTED: alcohol dehydrogenase class-3 [Cucumis melo][more]
XP_038876338.19.9e-4561.05alcohol dehydrogenase class-3 [Benincasa hispida][more]
BLAST of MS024352 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P805726.9e-4154.97Alcohol dehydrogenase class-3 OS=Pisum sativum OX=3888 PE=1 SV=1[more]
Q965332.2e-3954.76Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana OX=3702 GN=ADH2 PE=1 SV=2[more]
A2XAZ34.9e-3952.66Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica OX=39946 GN=ADHIII P... [more]
Q0DWH14.9e-3952.66Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0... [more]
P936291.1e-3852.07Alcohol dehydrogenase class-3 OS=Zea mays OX=4577 GN=FDH PE=2 SV=1[more]
BLAST of MS024352 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBZ19.7e-4662.21S-(hydroxymethyl)glutathione dehydrogenase OS=Cucumis sativus OX=3659 GN=Csa_6G0... [more]
A0A6J1DTJ79.7e-4662.21S-(hydroxymethyl)glutathione dehydrogenase OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A1S3CB003.7e-4561.63S-(hydroxymethyl)glutathione dehydrogenase OS=Cucumis melo OX=3656 GN=LOC1034989... [more]
A0A6J1JR826.3e-4561.05S-(hydroxymethyl)glutathione dehydrogenase OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1GRL81.1e-4460.47S-(hydroxymethyl)glutathione dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
BLAST of MS024352 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G43940.11.6e-4054.76GroES-like zinc-binding dehydrogenase family protein [more]
AT5G43940.21.6e-4054.76GroES-like zinc-binding dehydrogenase family protein [more]
AT5G24760.11.7e-1854.79GroES-like zinc-binding dehydrogenase family protein [more]
AT5G24760.21.7e-1854.79GroES-like zinc-binding dehydrogenase family protein [more]
AT5G24760.31.7e-1854.79GroES-like zinc-binding dehydrogenase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.180.10coord: 100..151
e-value: 1.4E-23
score: 85.4
NoneNo IPR availableGENE3D3.40.50.720coord: 33..78
e-value: 2.1E-5
score: 26.4
NoneNo IPR availableGENE3D3.40.50.720coord: 79..99
e-value: 1.4E-23
score: 85.4
NoneNo IPR availablePANTHERPTHR43880:SF47S-(HYDROXYMETHYL)GLUTATHIONE DEHYDROGENASEcoord: 45..78
NoneNo IPR availablePANTHERPTHR43880ALCOHOL DEHYDROGENASEcoord: 18..39
NoneNo IPR availablePANTHERPTHR43880:SF47S-(HYDROXYMETHYL)GLUTATHIONE DEHYDROGENASEcoord: 78..156
NoneNo IPR availablePANTHERPTHR43880:SF47S-(HYDROXYMETHYL)GLUTATHIONE DEHYDROGENASEcoord: 18..39
NoneNo IPR availablePANTHERPTHR43880ALCOHOL DEHYDROGENASEcoord: 45..78
NoneNo IPR availablePANTHERPTHR43880ALCOHOL DEHYDROGENASEcoord: 78..156
IPR011032GroES-like superfamilySUPERFAMILY50129GroES-likecoord: 105..154

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS024352.1MS024352.1mRNA