MS024317 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGTAGCTCAGTCCACCATTTTGGTGCTTTGGATAATTTATGCTATTTTAATCTGCATTGGCTCGGTCGTCGGAGCTCGGAAGATGTTGTTCCCGGCTCACAACGGTAGCGAGGACGACAACGACAGCTTAACGACTACAATGGAGACGACGACACTCGGTTCTTGCAAGTCAAAGAACCTCCATTGTTGTGAGTGCTCCTTCTCGAGCTCTGAGGAGATGGCCACGATCAATAATGGAAGCAGCAGCTCTGAGGAGAAAAGGGTTGTCCCCACTGGCCCTAACCCACTTCACAATAAGTAG ATGAGAGTAGCTCAGTCCACCATTTTGGTGCTTTGGATAATTTATGCTATTTTAATCTGCATTGGCTCGGTCGTCGGAGCTCGGAAGATGTTGTTCCCGGCTCACAACGGTAGCGAGGACGACAACGACAGCTTAACGACTACAATGGAGACGACGACACTCGGTTCTTGCAAGTCAAAGAACCTCCATTGTTGTGAGTGCTCCTTCTCGAGCTCTGAGGAGATGGCCACGATCAATAATGGAAGCAGCAGCTCTGAGGAGAAAAGGGTTGTCCCCACTGGCCCTAACCCACTTCACAATAAGTAG ATGAGAGTAGCTCAGTCCACCATTTTGGTGCTTTGGATAATTTATGCTATTTTAATCTGCATTGGCTCGGTCGTCGGAGCTCGGAAGATGTTGTTCCCGGCTCACAACGGTAGCGAGGACGACAACGACAGCTTAACGACTACAATGGAGACGACGACACTCGGTTCTTGCAAGTCAAAGAACCTCCATTGTTGTGAGTGCTCCTTCTCGAGCTCTGAGGAGATGGCCACGATCAATAATGGAAGCAGCAGCTCTGAGGAGAAAAGGGTTGTCCCCACTGGCCCTAACCCACTTCACAATAAGTAG MRVAQSTILVLWIIYAILICIGSVVGARKMLFPAHNGSEDDNDSLTTTMETTTLGSCKSKNLHCCECSFSSSEEMATINNGSSSSEEKRVVPTGPNPLHNK Homology
BLAST of MS024317 vs. NCBI nr
Match: KAG6587715.1 (hypothetical protein SDJN03_16280, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 113.2 bits (282), Expect = 1.3e-21 Identity = 68/101 (67.33%), Postives = 81/101 (80.20%), Query Frame = 0
BLAST of MS024317 vs. NCBI nr
Match: KGN65507.1 (hypothetical protein Csa_019832 [Cucumis sativus]) HSP 1 Score: 101.7 bits (252), Expect = 3.9e-18 Identity = 58/107 (54.21%), Postives = 76/107 (71.03%), Query Frame = 0
BLAST of MS024317 vs. NCBI nr
Match: KAA0058189.1 (Clavata3/ESR (CLE) protein [Cucumis melo var. makuwa] >TYK28553.1 Clavata3/ESR (CLE) gene family member [Cucumis melo var. makuwa]) HSP 1 Score: 99.0 bits (245), Expect = 2.5e-17 Identity = 57/107 (53.27%), Postives = 75/107 (70.09%), Query Frame = 0
BLAST of MS024317 vs. NCBI nr
Match: XP_023003872.1 (putative receptor-like protein kinase At4g00960 [Cucurbita maxima]) HSP 1 Score: 77.8 bits (190), Expect = 6.0e-11 Identity = 51/86 (59.30%), Postives = 64/86 (74.42%), Query Frame = 0
BLAST of MS024317 vs. ExPASy TrEMBL
Match: A0A0A0LXI1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G433060 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.9e-18 Identity = 58/107 (54.21%), Postives = 76/107 (71.03%), Query Frame = 0
BLAST of MS024317 vs. ExPASy TrEMBL
Match: A0A5A7UXE2 (Clavata3/ESR (CLE) gene family member OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002000 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.2e-17 Identity = 57/107 (53.27%), Postives = 75/107 (70.09%), Query Frame = 0
BLAST of MS024317 vs. ExPASy TrEMBL
Match: A0A6J1KNU3 (putative receptor-like protein kinase At4g00960 OS=Cucurbita maxima OX=3661 GN=LOC111497330 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.9e-11 Identity = 51/86 (59.30%), Postives = 64/86 (74.42%), Query Frame = 0
BLAST of MS024317 vs. ExPASy TrEMBL
Match: G7JT84 (Clavata3/ESR (CLE) gene family member OS=Medicago truncatula OX=3880 GN=MTR_4g126940 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 1.0e-03 Identity = 38/99 (38.38%), Postives = 52/99 (52.53%), Query Frame = 0
BLAST of MS024317 vs. ExPASy TrEMBL
Match: A0A396IGH6 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr4g0071381 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 1.0e-03 Identity = 38/99 (38.38%), Postives = 52/99 (52.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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