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MS024312 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAATTAATGGCTGCAGCTGGTGATCAAGATATGGCACTTCACTCTCTTGGGTCTAAAGTTTCTGTGCTTTCAGATCATGAACCTGAAAAATGTGGCCATGTTAACAACAATAATGTTGGCAATCACCAACAAAGACCTTGCTTTGATCCTAATTCTCTTGTTTCTCCCAAGGCTGTGCCGCCGATTTCGGTGGCGGCTGAGGGCGATCAAGCTCTCCGCCGCCCTCGAGGGCGTCCGGCCGGCTCCAAAAACAAGCCTAAACCACCCATCATTGTCACCCGAGATAGCGCCAATGCTCTCCGCGCTCATGCCATCGAAGTCAGCTCTGGCTGTGACGTTAACGAGAGCCTATCCAACTTCGCGCGAAGGAAACAACGTGGCGTTTGTATTTTGAGCGGGAGTGGATGTGTCACCAACGTCACGCTCCGCCAGGCTGCCTCCTCAGGCGCCATCGTCACTCTTCACGGCCGGTAA ATGCAATTAATGGCTGCAGCTGGTGATCAAGATATGGCACTTCACTCTCTTGGGTCTAAAGTTTCTGTGCTTTCAGATCATGAACCTGAAAAATGTGGCCATGTTAACAACAATAATGTTGGCAATCACCAACAAAGACCTTGCTTTGATCCTAATTCTCTTGTTTCTCCCAAGGCTGTGCCGCCGATTTCGGTGGCGGCTGAGGGCGATCAAGCTCTCCGCCGCCCTCGAGGGCGTCCGGCCGGCTCCAAAAACAAGCCTAAACCACCCATCATTGTCACCCGAGATAGCGCCAATGCTCTCCGCGCTCATGCCATCGAAGTCAGCTCTGGCTGTGACGTTAACGAGAGCCTATCCAACTTCGCGCGAAGGAAACAACGTGGCGTTTGTATTTTGAGCGGGAGTGGATGTGTCACCAACGTCACGCTCCGCCAGGCTGCCTCCTCAGGCGCCATCGTCACTCTTCACGGCCGGTAA ATGCAATTAATGGCTGCAGCTGGTGATCAAGATATGGCACTTCACTCTCTTGGGTCTAAAGTTTCTGTGCTTTCAGATCATGAACCTGAAAAATGTGGCCATGTTAACAACAATAATGTTGGCAATCACCAACAAAGACCTTGCTTTGATCCTAATTCTCTTGTTTCTCCCAAGGCTGTGCCGCCGATTTCGGTGGCGGCTGAGGGCGATCAAGCTCTCCGCCGCCCTCGAGGGCGTCCGGCCGGCTCCAAAAACAAGCCTAAACCACCCATCATTGTCACCCGAGATAGCGCCAATGCTCTCCGCGCTCATGCCATCGAAGTCAGCTCTGGCTGTGACGTTAACGAGAGCCTATCCAACTTCGCGCGAAGGAAACAACGTGGCGTTTGTATTTTGAGCGGGAGTGGATGTGTCACCAACGTCACGCTCCGCCAGGCTGCCTCCTCAGGCGCCATCGTCACTCTTCACGGCCGGTAA MQLMAAAGDQDMALHSLGSKVSVLSDHEPEKCGHVNNNNVGNHQQRPCFDPNSLVSPKAVPPISVAAEGDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR Homology
BLAST of MS024312 vs. NCBI nr
Match: XP_022135397.1 (AT-hook motif nuclear-localized protein 16 [Momordica charantia]) HSP 1 Score: 306.6 bits (784), Expect = 1.2e-79 Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0
BLAST of MS024312 vs. NCBI nr
Match: XP_038880552.1 (AT-hook motif nuclear-localized protein 16 [Benincasa hispida]) HSP 1 Score: 267.7 bits (683), Expect = 6.4e-68 Identity = 138/156 (88.46%), Postives = 144/156 (92.31%), Query Frame = 0
BLAST of MS024312 vs. NCBI nr
Match: KAE8652473.1 (hypothetical protein Csa_013658 [Cucumis sativus]) HSP 1 Score: 266.2 bits (679), Expect = 1.9e-67 Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 0
BLAST of MS024312 vs. NCBI nr
Match: XP_011649113.1 (AT-hook motif nuclear-localized protein 16 [Cucumis sativus]) HSP 1 Score: 266.2 bits (679), Expect = 1.9e-67 Identity = 139/157 (88.54%), Postives = 145/157 (92.36%), Query Frame = 0
BLAST of MS024312 vs. NCBI nr
Match: KAA0058128.1 (AT-hook motif nuclear-localized protein 16 [Cucumis melo var. makuwa] >TYK28482.1 AT-hook motif nuclear-localized protein 16 [Cucumis melo var. makuwa]) HSP 1 Score: 265.4 bits (677), Expect = 3.2e-67 Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 0
BLAST of MS024312 vs. ExPASy Swiss-Prot
Match: Q9SJG4 (AT-hook motif nuclear-localized protein 16 OS=Arabidopsis thaliana OX=3702 GN=AHL16 PE=1 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 6.5e-39 Identity = 91/152 (59.87%), Postives = 110/152 (72.37%), Query Frame = 0
BLAST of MS024312 vs. ExPASy Swiss-Prot
Match: O82166 (AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AHL21 PE=2 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 6.5e-31 Identity = 62/89 (69.66%), Postives = 77/89 (86.52%), Query Frame = 0
BLAST of MS024312 vs. ExPASy Swiss-Prot
Match: O49662 (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 2.7e-29 Identity = 62/91 (68.13%), Postives = 76/91 (83.52%), Query Frame = 0
BLAST of MS024312 vs. ExPASy Swiss-Prot
Match: O22130 (AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AHL22 PE=1 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 3.6e-29 Identity = 62/89 (69.66%), Postives = 77/89 (86.52%), Query Frame = 0
BLAST of MS024312 vs. ExPASy Swiss-Prot
Match: Q9SZ70 (AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AHL26 PE=2 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 4.6e-29 Identity = 60/91 (65.93%), Postives = 76/91 (83.52%), Query Frame = 0
BLAST of MS024312 vs. ExPASy TrEMBL
Match: A0A6J1C2K6 (AT-hook motif nuclear-localized protein 16 OS=Momordica charantia OX=3673 GN=LOC111007358 PE=4 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 6.0e-80 Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0
BLAST of MS024312 vs. ExPASy TrEMBL
Match: A0A0A0LPP3 (PPC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G024970 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 9.0e-68 Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 0
BLAST of MS024312 vs. ExPASy TrEMBL
Match: A0A5A7USJ9 (AT-hook motif nuclear-localized protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001160 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 1.5e-67 Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 0
BLAST of MS024312 vs. ExPASy TrEMBL
Match: A0A1S3BX46 (AT-hook motif nuclear-localized protein 16 OS=Cucumis melo OX=3656 GN=LOC103494172 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 1.5e-67 Identity = 139/157 (88.54%), Postives = 145/157 (92.36%), Query Frame = 0
BLAST of MS024312 vs. ExPASy TrEMBL
Match: A0A6J1KL97 (AT-hook motif nuclear-localized protein 16-like OS=Cucurbita maxima OX=3661 GN=LOC111495589 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 7.6e-59 Identity = 120/147 (81.63%), Postives = 128/147 (87.07%), Query Frame = 0
BLAST of MS024312 vs. TAIR 10
Match: AT2G42940.1 (Predicted AT-hook DNA-binding family protein ) HSP 1 Score: 161.8 bits (408), Expect = 4.6e-40 Identity = 91/152 (59.87%), Postives = 110/152 (72.37%), Query Frame = 0
BLAST of MS024312 vs. TAIR 10
Match: AT2G35270.1 (Predicted AT-hook DNA-binding family protein ) HSP 1 Score: 135.2 bits (339), Expect = 4.6e-32 Identity = 62/89 (69.66%), Postives = 77/89 (86.52%), Query Frame = 0
BLAST of MS024312 vs. TAIR 10
Match: AT4G22810.1 (Predicted AT-hook DNA-binding family protein ) HSP 1 Score: 129.8 bits (325), Expect = 1.9e-30 Identity = 62/91 (68.13%), Postives = 76/91 (83.52%), Query Frame = 0
BLAST of MS024312 vs. TAIR 10
Match: AT2G45430.1 (AT-hook motif nuclear-localized protein 22 ) HSP 1 Score: 129.4 bits (324), Expect = 2.5e-30 Identity = 62/89 (69.66%), Postives = 77/89 (86.52%), Query Frame = 0
BLAST of MS024312 vs. TAIR 10
Match: AT4G12050.1 (Predicted AT-hook DNA-binding family protein ) HSP 1 Score: 129.0 bits (323), Expect = 3.3e-30 Identity = 60/91 (65.93%), Postives = 76/91 (83.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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