MS024312 (gene) Bitter gourd (TR) v1

Overview


Name	MS024312
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	AT-hook motif nuclear-localized protein
Location	scaffold30: 2759697 .. 2760173 (-)
RNA-Seq Expression	MS024312
Synteny	MS024312

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAATTAATGGCTGCAGCTGGTGATCAAGATATGGCACTTCACTCTCTTGGGTCTAAAGTTTCTGTGCTTTCAGATCATGAACCTGAAAAATGTGGCCATGTTAACAACAATAATGTTGGCAATCACCAACAAAGACCTTGCTTTGATCCTAATTCTCTTGTTTCTCCCAAGGCTGTGCCGCCGATTTCGGTGGCGGCTGAGGGCGATCAAGCTCTCCGCCGCCCTCGAGGGCGTCCGGCCGGCTCCAAAAACAAGCCTAAACCACCCATCATTGTCACCCGAGATAGCGCCAATGCTCTCCGCGCTCATGCCATCGAAGTCAGCTCTGGCTGTGACGTTAACGAGAGCCTATCCAACTTCGCGCGAAGGAAACAACGTGGCGTTTGTATTTTGAGCGGGAGTGGATGTGTCACCAACGTCACGCTCCGCCAGGCTGCCTCCTCAGGCGCCATCGTCACTCTTCACGGCCGGTAA

mRNA sequence

ATGCAATTAATGGCTGCAGCTGGTGATCAAGATATGGCACTTCACTCTCTTGGGTCTAAAGTTTCTGTGCTTTCAGATCATGAACCTGAAAAATGTGGCCATGTTAACAACAATAATGTTGGCAATCACCAACAAAGACCTTGCTTTGATCCTAATTCTCTTGTTTCTCCCAAGGCTGTGCCGCCGATTTCGGTGGCGGCTGAGGGCGATCAAGCTCTCCGCCGCCCTCGAGGGCGTCCGGCCGGCTCCAAAAACAAGCCTAAACCACCCATCATTGTCACCCGAGATAGCGCCAATGCTCTCCGCGCTCATGCCATCGAAGTCAGCTCTGGCTGTGACGTTAACGAGAGCCTATCCAACTTCGCGCGAAGGAAACAACGTGGCGTTTGTATTTTGAGCGGGAGTGGATGTGTCACCAACGTCACGCTCCGCCAGGCTGCCTCCTCAGGCGCCATCGTCACTCTTCACGGCCGGTAA

Coding sequence (CDS)

ATGCAATTAATGGCTGCAGCTGGTGATCAAGATATGGCACTTCACTCTCTTGGGTCTAAAGTTTCTGTGCTTTCAGATCATGAACCTGAAAAATGTGGCCATGTTAACAACAATAATGTTGGCAATCACCAACAAAGACCTTGCTTTGATCCTAATTCTCTTGTTTCTCCCAAGGCTGTGCCGCCGATTTCGGTGGCGGCTGAGGGCGATCAAGCTCTCCGCCGCCCTCGAGGGCGTCCGGCCGGCTCCAAAAACAAGCCTAAACCACCCATCATTGTCACCCGAGATAGCGCCAATGCTCTCCGCGCTCATGCCATCGAAGTCAGCTCTGGCTGTGACGTTAACGAGAGCCTATCCAACTTCGCGCGAAGGAAACAACGTGGCGTTTGTATTTTGAGCGGGAGTGGATGTGTCACCAACGTCACGCTCCGCCAGGCTGCCTCCTCAGGCGCCATCGTCACTCTTCACGGCCGGTAA

Protein sequence

MQLMAAAGDQDMALHSLGSKVSVLSDHEPEKCGHVNNNNVGNHQQRPCFDPNSLVSPKAVPPISVAAEGDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR

Homology

[Close]

BLAST of MS024312 vs. NCBI nr
Match: XP_022135397.1 (AT-hook motif nuclear-localized protein 16 [Momordica charantia])

HSP 1 Score: 306.6 bits (784), Expect = 1.2e-79
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MQLMAAAGDQDMALHSLGSKVSVLSDHEPEKCGHVNNNNVGNHQQRPCFDPNSLVSPKAV 60
           MQLMAAAGDQDMALHSLGSKVSVLSDHEPEKCGHV NNNVGNHQQRPCFDPNSLVSPKAV
Sbjct: 1   MQLMAAAGDQDMALHSLGSKVSVLSDHEPEKCGHV-NNNVGNHQQRPCFDPNSLVSPKAV 60

Query: 61  PPISVAAEGDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSN 120
           PPISVAAEGDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSN
Sbjct: 61  PPISVAAEGDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSN 120

Query: 121 FARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 159
           FARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR
Sbjct: 121 FARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 157

[Close]

BLAST of MS024312 vs. NCBI nr
Match: XP_038880552.1 (AT-hook motif nuclear-localized protein 16 [Benincasa hispida])

HSP 1 Score: 267.7 bits (683), Expect = 6.4e-68
Identity = 138/156 (88.46%), Postives = 144/156 (92.31%), Query Frame = 0


Query: 3   LMAAAGDQDMALHSLGSKVSVLSDHEPEKCGHVNNNNVGNHQQRPCFDPNSLVSPKAVPP 62
           +  A GDQDMA+HSLGSK+SV+S+HEPEKCG   +N   NHQQRPCFDP SLVSPKAVPP
Sbjct: 1   MQMAGGDQDMAIHSLGSKLSVVSEHEPEKCG---SNATNNHQQRPCFDP-SLVSPKAVPP 60

Query: 63  ISVAAEGDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFA 122
           ISVA E DQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFA
Sbjct: 61  ISVAVESDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFA 120

Query: 123 RRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 159
           RRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR
Sbjct: 121 RRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 152

[Close]

BLAST of MS024312 vs. NCBI nr
Match: KAE8652473.1 (hypothetical protein Csa_013658 [Cucumis sativus])

HSP 1 Score: 266.2 bits (679), Expect = 1.9e-67
Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 6   AAGDQ-DMALHSLGSKVSVLSDHEPEKCGHVNNNNVGNHQQRPCFDPNSLVSPKAVPPIS 65
           A GDQ DMA+HSLGSK+S++SDHEPEKCG  NNN   NHQQRPCFDP SLVSPK VPPIS
Sbjct: 2   AGGDQADMAVHSLGSKLSLISDHEPEKCG--NNNVTNNHQQRPCFDP-SLVSPKVVPPIS 61

Query: 66  VAAEGDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARR 125
           VAAE DQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVS+GCDVNESLSNFARR
Sbjct: 62  VAAESDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSTGCDVNESLSNFARR 121

Query: 126 KQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 159
           KQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR
Sbjct: 122 KQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 152

[Close]

BLAST of MS024312 vs. NCBI nr
Match: XP_011649113.1 (AT-hook motif nuclear-localized protein 16 [Cucumis sativus])

HSP 1 Score: 266.2 bits (679), Expect = 1.9e-67
Identity = 139/157 (88.54%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 3   LMAAAGDQ-DMALHSLGSKVSVLSDHEPEKCGHVNNNNVGNHQQRPCFDPNSLVSPKAVP 62
           +  A GDQ DMA+HSLGSK+S++SDHEPEKCG  NNN   NHQQRPCFDP SLVSPK VP
Sbjct: 1   MQMAGGDQADMAVHSLGSKLSLISDHEPEKCG--NNNVTNNHQQRPCFDP-SLVSPKVVP 60

Query: 63  PISVAAEGDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNF 122
           PISVAAE DQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVS+GCDVNESLSNF
Sbjct: 61  PISVAAESDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSTGCDVNESLSNF 120

Query: 123 ARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 159
           ARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR
Sbjct: 121 ARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 154

[Close]

BLAST of MS024312 vs. NCBI nr
Match: KAA0058128.1 (AT-hook motif nuclear-localized protein 16 [Cucumis melo var. makuwa] >TYK28482.1 AT-hook motif nuclear-localized protein 16 [Cucumis melo var. makuwa])

HSP 1 Score: 265.4 bits (677), Expect = 3.2e-67
Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 6   AAGDQ-DMALHSLGSKVSVLSDHEPEKCGHVNNNNVGNHQQRPCFDPNSLVSPKAVPPIS 65
           A GDQ DMA+HSLGSK+S++S+HEPEKCG  NNN   NHQQRPCFDP SLVSPK VPPIS
Sbjct: 2   AGGDQADMAVHSLGSKLSLISEHEPEKCGS-NNNVTNNHQQRPCFDP-SLVSPKVVPPIS 61

Query: 66  VAAEGDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARR 125
           VAAE DQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARR
Sbjct: 62  VAAESDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARR 121

Query: 126 KQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 159
           KQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR
Sbjct: 122 KQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 153

[Close]

BLAST of MS024312 vs. ExPASy Swiss-Prot
Match: Q9SJG4 (AT-hook motif nuclear-localized protein 16 OS=Arabidopsis thaliana OX=3702 GN=AHL16 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.5e-39
Identity = 91/152 (59.87%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 7   AGDQDMALHSLGSKVSVLSDHEPEKCGHVNNNNVGNHQQRPCFDPNSLVSPKAVPPISVA 66
           AG   +   S+GSK   + +HE  + G+ NN              N    PKAV P+S +
Sbjct: 2   AGGTALTPTSVGSKSVPMRNHEATERGNTNN--------------NLRALPKAVQPVS-S 61

Query: 67  AEGDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARRKQ 126
            EG+ A +RPRGRPAGSKNKPKPPIIVT DS N+LRA+A+E+SSGCD+ E+LS+FARRKQ
Sbjct: 62  IEGEMA-KRPRGRPAGSKNKPKPPIIVTHDSPNSLRANAVEISSGCDICETLSDFARRKQ 121

Query: 127 RGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 159
           RG+CILS +GCVTNVTLRQ ASSGAIVTLHGR
Sbjct: 122 RGLCILSANGCVTNVTLRQPASSGAIVTLHGR 137

[Close]

BLAST of MS024312 vs. ExPASy Swiss-Prot
Match: O82166 (AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AHL21 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.5e-31
Identity = 62/89 (69.66%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 69  GDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARRKQRG 128
           GD  +RRPRGRPAGSKNKPKPP+IVTR+SAN LRAH +EV SGCDV E +S +ARR+QRG
Sbjct: 73  GDLVMRRPRGRPAGSKNKPKPPVIVTRESANTLRAHILEVGSGCDVFECISTYARRRQRG 132

Query: 129 VCILSGSGCVTNVTLRQAASSGAIVTLHG 158
           +C+LSG+G VTNV++RQ  ++GA+VTL G
Sbjct: 133 ICVLSGTGTVTNVSIRQPTAAGAVVTLRG 161

[Close]

BLAST of MS024312 vs. ExPASy Swiss-Prot
Match: O49662 (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.7e-29
Identity = 62/91 (68.13%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 71  QALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARRKQRGVC 130
           Q  RRPRGRPAGSKNKPKPPII+TRDSANALR H +E+  GCD+ ES++ FARR+QRGVC
Sbjct: 102 QMTRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRGVC 161

Query: 131 ILSGSGCVTNVTLRQAA---SSGAIVTLHGR 159
           ++SG+G VTNVT+RQ     S G++V+LHGR
Sbjct: 162 VMSGTGNVTNVTIRQPGSHPSPGSVVSLHGR 192

[Close]

BLAST of MS024312 vs. ExPASy Swiss-Prot
Match: O22130 (AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AHL22 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.6e-29
Identity = 62/89 (69.66%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 74  RRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARRKQRGVCILS 133
           RRPRGRPAGSKNKPKPPII+TRDSANAL++H +EV++GCDV ES++ FARR+QRG+C+LS
Sbjct: 89  RRPRGRPAGSKNKPKPPIIITRDSANALKSHVMEVANGCDVMESVTVFARRRQRGICVLS 148

Query: 134 GSGCVTNVTLRQAAS----SGAIVTLHGR 159
           G+G VTNVT+RQ AS      ++V LHGR
Sbjct: 149 GNGAVTNVTIRQPASVPGGGSSVVNLHGR 177

[Close]

BLAST of MS024312 vs. ExPASy Swiss-Prot
Match: Q9SZ70 (AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AHL26 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.6e-29
Identity = 60/91 (65.93%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 69  GDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARRKQRG 128
           G+Q  RRPRGRPAGSKNKPK PII+TRDSANALR H +E+  GCD+ + ++ FARR+QRG
Sbjct: 113 GEQMTRRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRG 172

Query: 129 VCILSGSGCVTNVTLRQAAS-SGAIVTLHGR 159
           VC++SG+G VTNVT+RQ  S  G++V+LHGR
Sbjct: 173 VCVMSGTGSVTNVTIRQPGSPPGSVVSLHGR 203

[Close]

BLAST of MS024312 vs. ExPASy TrEMBL
Match: A0A6J1C2K6 (AT-hook motif nuclear-localized protein 16 OS=Momordica charantia OX=3673 GN=LOC111007358 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 6.0e-80
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MQLMAAAGDQDMALHSLGSKVSVLSDHEPEKCGHVNNNNVGNHQQRPCFDPNSLVSPKAV 60
           MQLMAAAGDQDMALHSLGSKVSVLSDHEPEKCGHV NNNVGNHQQRPCFDPNSLVSPKAV
Sbjct: 1   MQLMAAAGDQDMALHSLGSKVSVLSDHEPEKCGHV-NNNVGNHQQRPCFDPNSLVSPKAV 60

Query: 61  PPISVAAEGDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSN 120
           PPISVAAEGDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSN
Sbjct: 61  PPISVAAEGDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSN 120

Query: 121 FARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 159
           FARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR
Sbjct: 121 FARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 157

[Close]

BLAST of MS024312 vs. ExPASy TrEMBL
Match: A0A0A0LPP3 (PPC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G024970 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 9.0e-68
Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 6   AAGDQ-DMALHSLGSKVSVLSDHEPEKCGHVNNNNVGNHQQRPCFDPNSLVSPKAVPPIS 65
           A GDQ DMA+HSLGSK+S++SDHEPEKCG  NNN   NHQQRPCFDP SLVSPK VPPIS
Sbjct: 2   AGGDQADMAVHSLGSKLSLISDHEPEKCG--NNNVTNNHQQRPCFDP-SLVSPKVVPPIS 61

Query: 66  VAAEGDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARR 125
           VAAE DQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVS+GCDVNESLSNFARR
Sbjct: 62  VAAESDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSTGCDVNESLSNFARR 121

Query: 126 KQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 159
           KQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR
Sbjct: 122 KQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 152

[Close]

BLAST of MS024312 vs. ExPASy TrEMBL
Match: A0A5A7USJ9 (AT-hook motif nuclear-localized protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001160 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.5e-67
Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 6   AAGDQ-DMALHSLGSKVSVLSDHEPEKCGHVNNNNVGNHQQRPCFDPNSLVSPKAVPPIS 65
           A GDQ DMA+HSLGSK+S++S+HEPEKCG  NNN   NHQQRPCFDP SLVSPK VPPIS
Sbjct: 2   AGGDQADMAVHSLGSKLSLISEHEPEKCGS-NNNVTNNHQQRPCFDP-SLVSPKVVPPIS 61

Query: 66  VAAEGDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARR 125
           VAAE DQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARR
Sbjct: 62  VAAESDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARR 121

Query: 126 KQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 159
           KQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR
Sbjct: 122 KQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 153

[Close]

BLAST of MS024312 vs. ExPASy TrEMBL
Match: A0A1S3BX46 (AT-hook motif nuclear-localized protein 16 OS=Cucumis melo OX=3656 GN=LOC103494172 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.5e-67
Identity = 139/157 (88.54%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 3   LMAAAGDQ-DMALHSLGSKVSVLSDHEPEKCGHVNNNNVGNHQQRPCFDPNSLVSPKAVP 62
           +  A GDQ DMA+HSLGSK+S++S+HEPEKCG  NNN   NHQQRPCFDP SLVSPK VP
Sbjct: 1   MQMAGGDQADMAVHSLGSKLSLISEHEPEKCGS-NNNVTNNHQQRPCFDP-SLVSPKVVP 60

Query: 63  PISVAAEGDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNF 122
           PISVAAE DQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNF
Sbjct: 61  PISVAAESDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNF 120

Query: 123 ARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 159
           ARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR
Sbjct: 121 ARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 155

[Close]

BLAST of MS024312 vs. ExPASy TrEMBL
Match: A0A6J1KL97 (AT-hook motif nuclear-localized protein 16-like OS=Cucurbita maxima OX=3661 GN=LOC111495589 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.6e-59
Identity = 120/147 (81.63%), Postives = 128/147 (87.07%), Query Frame = 0


Query: 12  MALHSLGSKVSVLSDHEPEKCGHVNNNNVGNHQQRPCFDPNSLVSPKAVPPISVAAEGDQ 71
           + +H++      +  HEPEKCG     N  NHQQRPCFDP+SL+SPKAVPPISVAAE DQ
Sbjct: 3   LKVHAMAGSDQDMGVHEPEKCG-----NNANHQQRPCFDPSSLLSPKAVPPISVAAESDQ 62

Query: 72  ALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARRKQRGVCI 131
           ALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLS+FARRKQRGVCI
Sbjct: 63  ALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSSFARRKQRGVCI 122

Query: 132 LSGSGCVTNVTLRQAASSGAIVTLHGR 159
           LSGSGCV NVTLRQAASSG IVTLHGR
Sbjct: 123 LSGSGCVVNVTLRQAASSGTIVTLHGR 144

[Close]

BLAST of MS024312 vs. TAIR 10
Match: AT2G42940.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 161.8 bits (408), Expect = 4.6e-40
Identity = 91/152 (59.87%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 7   AGDQDMALHSLGSKVSVLSDHEPEKCGHVNNNNVGNHQQRPCFDPNSLVSPKAVPPISVA 66
           AG   +   S+GSK   + +HE  + G+ NN              N    PKAV P+S +
Sbjct: 2   AGGTALTPTSVGSKSVPMRNHEATERGNTNN--------------NLRALPKAVQPVS-S 61

Query: 67  AEGDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARRKQ 126
            EG+ A +RPRGRPAGSKNKPKPPIIVT DS N+LRA+A+E+SSGCD+ E+LS+FARRKQ
Sbjct: 62  IEGEMA-KRPRGRPAGSKNKPKPPIIVTHDSPNSLRANAVEISSGCDICETLSDFARRKQ 121

Query: 127 RGVCILSGSGCVTNVTLRQAASSGAIVTLHGR 159
           RG+CILS +GCVTNVTLRQ ASSGAIVTLHGR
Sbjct: 122 RGLCILSANGCVTNVTLRQPASSGAIVTLHGR 137

[Close]

BLAST of MS024312 vs. TAIR 10
Match: AT2G35270.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 135.2 bits (339), Expect = 4.6e-32
Identity = 62/89 (69.66%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 69  GDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARRKQRG 128
           GD  +RRPRGRPAGSKNKPKPP+IVTR+SAN LRAH +EV SGCDV E +S +ARR+QRG
Sbjct: 73  GDLVMRRPRGRPAGSKNKPKPPVIVTRESANTLRAHILEVGSGCDVFECISTYARRRQRG 132

Query: 129 VCILSGSGCVTNVTLRQAASSGAIVTLHG 158
           +C+LSG+G VTNV++RQ  ++GA+VTL G
Sbjct: 133 ICVLSGTGTVTNVSIRQPTAAGAVVTLRG 161

[Close]

BLAST of MS024312 vs. TAIR 10
Match: AT4G22810.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 129.8 bits (325), Expect = 1.9e-30
Identity = 62/91 (68.13%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 71  QALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARRKQRGVC 130
           Q  RRPRGRPAGSKNKPKPPII+TRDSANALR H +E+  GCD+ ES++ FARR+QRGVC
Sbjct: 102 QMTRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRGVC 161

Query: 131 ILSGSGCVTNVTLRQAA---SSGAIVTLHGR 159
           ++SG+G VTNVT+RQ     S G++V+LHGR
Sbjct: 162 VMSGTGNVTNVTIRQPGSHPSPGSVVSLHGR 192

[Close]

BLAST of MS024312 vs. TAIR 10
Match: AT2G45430.1 (AT-hook motif nuclear-localized protein 22 )

HSP 1 Score: 129.4 bits (324), Expect = 2.5e-30
Identity = 62/89 (69.66%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 74  RRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARRKQRGVCILS 133
           RRPRGRPAGSKNKPKPPII+TRDSANAL++H +EV++GCDV ES++ FARR+QRG+C+LS
Sbjct: 89  RRPRGRPAGSKNKPKPPIIITRDSANALKSHVMEVANGCDVMESVTVFARRRQRGICVLS 148

Query: 134 GSGCVTNVTLRQAAS----SGAIVTLHGR 159
           G+G VTNVT+RQ AS      ++V LHGR
Sbjct: 149 GNGAVTNVTIRQPASVPGGGSSVVNLHGR 177

[Close]

BLAST of MS024312 vs. TAIR 10
Match: AT4G12050.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 129.0 bits (323), Expect = 3.3e-30
Identity = 60/91 (65.93%), Postives = 76/91 (83.52%), Query Frame = 0


Query: 69  GDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSSGCDVNESLSNFARRKQRG 128
           G+Q  RRPRGRPAGSKNKPK PII+TRDSANALR H +E+  GCD+ + ++ FARR+QRG
Sbjct: 113 GEQMTRRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRG 172

Query: 129 VCILSGSGCVTNVTLRQAAS-SGAIVTLHGR 159
           VC++SG+G VTNVT+RQ  S  G++V+LHGR
Sbjct: 173 VCVMSGTGSVTNVTIRQPGSPPGSVVSLHGR 203

The following BLAST results are available for this feature:

BLAST of MS024312 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135397.1	1.2e-79	99.37	AT-hook motif nuclear-localized protein 16 [Momordica charantia]	[more]
XP_038880552.1	6.4e-68	88.46	AT-hook motif nuclear-localized protein 16 [Benincasa hispida]	[more]
KAE8652473.1	1.9e-67	90.26	hypothetical protein Csa_013658 [Cucumis sativus]	[more]
XP_011649113.1	1.9e-67	88.54	AT-hook motif nuclear-localized protein 16 [Cucumis sativus]	[more]
KAA0058128.1	3.2e-67	90.26	AT-hook motif nuclear-localized protein 16 [Cucumis melo var. makuwa] >TYK28482....	[more]

BLAST of MS024312 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJG4	6.5e-39	59.87	AT-hook motif nuclear-localized protein 16 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O82166	6.5e-31	69.66	AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O49662	2.7e-29	68.13	AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O22130	3.6e-29	69.66	AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q9SZ70	4.6e-29	65.93	AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]

BLAST of MS024312 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2K6	6.0e-80	99.37	AT-hook motif nuclear-localized protein 16 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A0A0LPP3	9.0e-68	90.26	PPC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G024970 PE=4 SV...	[more]
A0A5A7USJ9	1.5e-67	90.26	AT-hook motif nuclear-localized protein 16 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BX46	1.5e-67	88.54	AT-hook motif nuclear-localized protein 16 OS=Cucumis melo OX=3656 GN=LOC1034941...	[more]
A0A6J1KL97	7.6e-59	81.63	AT-hook motif nuclear-localized protein 16-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of MS024312 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42940.1	4.6e-40	59.87	Predicted AT-hook DNA-binding family protein	[more]
AT2G35270.1	4.6e-32	69.66	Predicted AT-hook DNA-binding family protein	[more]
AT4G22810.1	1.9e-30	68.13	Predicted AT-hook DNA-binding family protein	[more]
AT2G45430.1	2.5e-30	69.66	AT-hook motif nuclear-localized protein 22	[more]
AT4G12050.1	3.3e-30	65.93	Predicted AT-hook DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.1330.80		coord: 101..158 e-value: 1.4E-8 score: 36.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..91
None	No IPR available	PANTHER	PTHR31100:SF15	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED	coord: 59..158
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 98..157
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 102..144 e-value: 3.4E-10 score: 40.3
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 98..158 score: 22.059566
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 102..158 e-value: 7.38473E-14 score: 62.2178
IPR014476	AT-hook motif nuclear-localized protein 15-29	PANTHER	PTHR31100	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	coord: 59..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS024312.1	MS024312.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding