MS024308 (gene) Bitter gourd (TR) v1

Overview


Name	MS024308
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	peroxisome biogenesis protein 3-2-like
Location	scaffold30: 2714350 .. 2719032 (-)
RNA-Seq Expression	MS024308
Synteny	MS024308

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGAGTTCATAAAACTCGAGATAAAGTGTGCTAGGACTGTTACCGTCTTCTGTGCGTGGACAAAGCCGAACTCCAAGAGGTAAAAGATTAAAAACGAAGATTATTCTTATATTAATCAATCAATCGAAGTGCCCATTCTCTCTCGGCTTGCAGATTCCTTGTCTTCTTCAAGCTCAAAACCCTCGAAATTTCATTAGAATCCGCGTTAAGGAGGGCAAGACCTGCTTCCTTCTGTTCCTGCTGAGTTGCTTCCCGTGGGGTTTTCAAGTTTGCGGGCCTTATCGAGGAGTTGCGGCGTTTCTCCATCTCTTTTTCCTATCTGGGTCCGTGACTGTATTGGTTATCAGCTCATTTGATTTCCGCTTTACGTCCTTTTTCTTCTAATTTCAATCATTGTTTTGTTGGAATGGATTTGCAGTTGGCTAAGGCATGGTGATGGATATCCGGTTTAATTTATGACACCAAAATGATTCCGTTAAGGTCAGTTCTCATGTTCCTCCTGCATTCATTATTTCGCATGGCTCTCATCTGTGTTGCTATTGATCTGGGTATCTTTTTTATTTCATCGCAACTATTATATTGAAGCTGAATTTGTAAAGTAGTGGCTATGTTTGATAGCTGATCTAATTTTCGGTTCCGTTGTTCGTTTATTTGGTAGAAATGGTGCTACTCTCTGATTCGAGACAATTGCGAATTGGATGGGATGATTAATTTCTAATCGATCAATGTAGAGTAAATGGTTTCACATTATTTGATGACAAATCGATTCTGAATGAATGCAACTTCCATTTTCCTGTTTGAATGTATTCCCAATAGGAACTTTCTAATACCTCTACCATTATAATTTACACTTTTATCAAGGATAATAATTAATAATTGTGTCTTCAGTCTTGTATGTGAATTGAAAGAAATGAAAGAGAGAGCGTCAAGAGGGGGAAGGCTTGGGCTCTACGTCTACCTGATACGAAGCCTCCACAATGAAAAAAATTGTCTGTGTACCATTAAAATTAAATGGCTTTTACAAGTAGATTACAAAACAGTGGAAATAGTTAATAAGCAAGCAGTAAAATCAAAATTGTCATCAAACGAGTGTATGTATATTTGTTCAAAACCATAGATGTTTGGGCAAACTTAGATGGGCTCCAACTAACTATTTGGGACAACTAAACACTACAATTTTTTGCATAAAGGAAATTGTAGAACATTAGATATCTTCGTTAGTAGGCATGGTTGGAACACATGACCTCACAAGTATCTGTTTTGCACCTCATCCCTTTGATTATTGAGCCACCCCTAACATCACTTGATATCTTAAAATATCTATAAATTTCATTCTATTGATCTCAAAACATGGTTTCAGAATAAAAACGATATTGAAGGCAGATTGTGAGAGTTAGTAGTTGATAGGGAACTGCGACAATACTTTGGTTTCTTACATTTCATAATGTCTTATTATCTCTAACACTGTGCGAGCAGGGATTTTTGGAGAAGGCATAAGAGGAAGATTTTAATCACAGCTGGTGTTTTGGGAAGTGGGTATTTTCTTTACAGACAATATGATGCTTATAGTCGAAGGCTTCATGATATCCAGAGAGAGTTGGCTAATGAACGCGAAGCAGATGAGCTCATTAAGGCTCAGTTAAGAGATGCTACCTTTTCTTCCCTTATTTTCACCAGTATCGGTTCTCAGAGTTATTTAACTTTTGTGTTTTCTGGATTCATGTTTGTAGAATACAAGCTCATTTTGAGAATATTCAAAGGATAGCTGACACGACAACACTGCCTCATGCTATACGACATTTACATAGTCGGATAGAAGAAGATTTGGATCTTTCTCACCTGACAGAGAGGTTAATGATGGGGAAGGGTCAGCCAAACACTTTGACATTGGCTGAGAAACTTGATTTATGGGAAAACCTCAAAATACTAAGTATGAAGAGGGCCCAGGCCCACTTTGGTGTTTATTCTCTGGTCTTTAACTTATAACTTTTCTCCTTAACTGAAGACTATAAACTTAGATCACTTTGATCGGAATGTGTTTTTCCAGGCTTCACAAAGATGGTTATATCACTCTGGGCAATAACCGTGTTAAGCTTATACATTAGAGTTCAAGTCAACATATTAGGAAGACATATGTACATTGATACTGCTCGTGGTTTTGGTAGCTCCCATTTACTTGTAAGGCCTGCTGTATTTGCCATTTCATATTTTTGTGAACTGTTTTCATTATTGTTCCTCTCGGAATTACTGGATTAGTCATTTTACCTTTAGTTGTTATTTTGGTGCTGTTTTTATCATTTCTTATATAGAAGTGCTGATGATGTTTTCTGCGTGTATCATTAGAAATTTGGATTTATGATTTATGCAATTTTATCCAAATGTTTTTGAGATTTTTTTATGAGTTAATAATCATTTAATAACTCAAAAATATTCAATGCTTTAGATTTCTTACTGGAAGTTCTAACGTTACTCCCATATTCAGACTTCATAGAGTGTACCAGATGTTAATCTTCATATAATTTATTGTTGTTGTTGTTATTATTATTATTATTTTGGTAGCCAGAACATATGTATATTTGCTTAATTGTGTTTGCCATTATTTATGACCTGAGCTTTACATGACTGCGGTTTTGAATACGTTCTATGAAGAAAGAACTATTAGGAAAGGTGGGATGCAAAGTGGTTCCAGTGGACCAGTGGTATCTCTGTTCTGTAAAGGAAAAACAAATGTTCTACAGTGTGGAGTGGATGTGTTATTTGTTTCACCAATAAATAAGTAATCATTCTACAAAATCTAATAACCAGTAATTCGTATAATCCTGATCCAGTATGCTGCACCTGCATTTATTTTGCTAACATGGATGTCAATGCTTTTGCCAGTTGTAAACTTCTTAGAATGATGTGAGACGTTAAATGTCTTAGATATCATAACTAGAAAGTTGTGCAGTCTATGTTCTTTTTTAGTTATTCTTTGATTCATTGTCTACTTTTCTGAAATATTAGTCCTTGTGGTTCCTGATTCTGCAGGAGGAGGCTGATCTCATCGATAGGGACGACCAGCAGAAATTTCTGGCCATCTCTGATTTCCTCTCCAATTATGGTTTGAATGCCTTGATTCCTAAAATGCAGGTAGCAGTAGCAGAAGTTCTCAAGAGGTAAGAGGCTCGTTTGAATATAGTTTCAGAAAAATGCTTGAAACTTTCACAAGTATACATGTACATCACATCAAAGATATTCTTGTAAAATGGTATCTAGAGATCCCAAACGCCCCCCCATAGTGACCTAAAATATCATGTTCCTTAACTATTTTCCTGTTAAACCATTTTGTCATGCATATGAATCACACAAGTGGAAGTTTTTTTTTTTTTTTTTTTTTTAATCATCTGGAAACTGAGATTATTTCTTCATAAAACTTTATTCAAGTTCAAGACCAAATTGTGTTACTGATTCCAAGCTCTTCCATCAAGAAACTTGATGAACTGAAGCATAGTTATCCTGAAGCTTTGTTTGATAATGTTTTACGGAGATTATGTCTGATTGTACTATGTCTTTTATATCTCATCATTAGTATTCTTTATTGGTTCTTGGTTGCAGAAAACAGTTGCGAGATGTCTTTAACACAACTATACTTCGCGAAACTACAATGCAAATAATCAAAATCTTCATGAGCACAGGAAGTCCCCATCATTGGTTGGACTACTTGATGCCTGAGGACAATCAATCAAATATTAAAGCCGTGCTCTCCACCGATGAGGATGCAGCTGATCCAAATTTTAATAAGTTTGACCAACTTATGATGGAGACTAGAGCAGTGTTACTAAGGTATGATGATTATAAACCAACAGTCACCATAATGAATGTAGATGAAAGGCTCATAATCAATTTTACCAGGAAACATGCATGGAGTTGTGAAGGTTAATTTACAAGTTATGTCCCTGATATTTAGTCTCTATTTTATAGACAATAAAGTGTCTAATGAGTCTCTAAACTTTCAATTTTGAGTCTAAAGGTTCAAGAATGAAAAAAAAGGTAAGTTATGGACTTGTTAGGCACTTTTAAAGTTCTGTAACTTATCAAACACAAAATTGTACACCTATTTAAAATTAATGGATCTATTAGACACACTCTTATAAGTTCAAAAACTAAACTTATAATTTAACCGGTTTGAATGAACATGAAAATTGTGCACGGGTCAGAATTACTTAAAAACCATTACTGTTTGCAGTGTAAAATGCTTGCTTAAAAATGCATTTCTTCTGTAATCATGCTTCCTTGATACTTCATACGAGTTTTTCGTCGATCCTACATCCTTTAAGTTGATGCAATATCATCGCTCAAGCATCCACCCAGACGAATGTAAATGGAAGTTTCTTTCTACTAAAGATGTATCAGTTTATTCTCTCTCCTTTTCTGGGTTCAGTGCCGAATTTGGGAACGTAGTCGAGAGATCGTTAGAAGCAGGAGCTGATGGATTGATGGAAGAAATGGAGGCTTCGCTTGCAGGAGGCAGCAGTAGGACATCAGGGATACCACTGGCAAGACTTGTGCCAAGAGTTGCCCAGATGGGGCCATTGCTCCTTGAAGATCCAATCAAAAGTAGATTCATCCAAATGATAAGAGGTATACCAGAAGCGGAAATATTCTTCACTCTCCTCTATGCAAATATGCCTGCCTCCTAG

mRNA sequence

ATGATAGAGTTCATAAAACTCGAGATAAAGTGTGCTAGGACTGTTACCGTCTTCTGTGCGTGGACAAAGCCGAACTCCAAGAGACAATATGATGCTTATAGTCGAAGGCTTCATGATATCCAGAGAGAGTTGGCTAATGAACGCGAAGCAGATGAGCTCATTAAGGCTCAAATACAAGCTCATTTTGAGAATATTCAAAGGATAGCTGACACGACAACACTGCCTCATGCTATACGACATTTACATAGTCGGATAGAAGAAGATTTGGATCTTTCTCACCTGACAGAGAGGTTAATGATGGGGAAGGGTCAGCCAAACACTTTGACATTGGCTGAGAAACTTGATTTATGGGAAAACCTCAAAATACTAAGTATGAAGAGGGCCCAGGCCCACTTTGGTGTTTATTCTCTGCTTTACATGACTGCGGTTTTGAATACGTTCTATGAAGAAAGAACTATTAGGAAAGGTGGGATGCAAAGTGGTTCCAGTGGACCAGTGGAGGAGGCTGATCTCATCGATAGGGACGACCAGCAGAAATTTCTGGCCATCTCTGATTTCCTCTCCAATTATGGTTTGAATGCCTTGATTCCTAAAATGCAGGTAGCAGTAGCAGAAGTTCTCAAGAGAAAACAGTTGCGAGATGTCTTTAACACAACTATACTTCGCGAAACTACAATGCAAATAATCAAAATCTTCATGAGCACAGGAAGTCCCCATCATTGGTTGGACTACTTGATGCCTGAGGACAATCAATCAAATATTAAAGCCGTGCTCTCCACCGATGAGGATGCAGCTGATCCAAATTTTAATAAGTTTGACCAACTTATGATGGAGACTAGAGCAGTGTTACTAAGTGCCGAATTTGGGAACGTAGTCGAGAGATCGTTAGAAGCAGGAGCTGATGGATTGATGGAAGAAATGGAGGCTTCGCTTGCAGGAGGCAGCAGTAGGACATCAGGGATACCACTGGCAAGACTTGTGCCAAGAGTTGCCCAGATGGGGCCATTGCTCCTTGAAGATCCAATCAAAAGTAGATTCATCCAAATGATAAGAGGTATACCAGAAGCGGAAATATTCTTCACTCTCCTCTATGCAAATATGCCTGCCTCCTAG

Coding sequence (CDS)

ATGATAGAGTTCATAAAACTCGAGATAAAGTGTGCTAGGACTGTTACCGTCTTCTGTGCGTGGACAAAGCCGAACTCCAAGAGACAATATGATGCTTATAGTCGAAGGCTTCATGATATCCAGAGAGAGTTGGCTAATGAACGCGAAGCAGATGAGCTCATTAAGGCTCAAATACAAGCTCATTTTGAGAATATTCAAAGGATAGCTGACACGACAACACTGCCTCATGCTATACGACATTTACATAGTCGGATAGAAGAAGATTTGGATCTTTCTCACCTGACAGAGAGGTTAATGATGGGGAAGGGTCAGCCAAACACTTTGACATTGGCTGAGAAACTTGATTTATGGGAAAACCTCAAAATACTAAGTATGAAGAGGGCCCAGGCCCACTTTGGTGTTTATTCTCTGCTTTACATGACTGCGGTTTTGAATACGTTCTATGAAGAAAGAACTATTAGGAAAGGTGGGATGCAAAGTGGTTCCAGTGGACCAGTGGAGGAGGCTGATCTCATCGATAGGGACGACCAGCAGAAATTTCTGGCCATCTCTGATTTCCTCTCCAATTATGGTTTGAATGCCTTGATTCCTAAAATGCAGGTAGCAGTAGCAGAAGTTCTCAAGAGAAAACAGTTGCGAGATGTCTTTAACACAACTATACTTCGCGAAACTACAATGCAAATAATCAAAATCTTCATGAGCACAGGAAGTCCCCATCATTGGTTGGACTACTTGATGCCTGAGGACAATCAATCAAATATTAAAGCCGTGCTCTCCACCGATGAGGATGCAGCTGATCCAAATTTTAATAAGTTTGACCAACTTATGATGGAGACTAGAGCAGTGTTACTAAGTGCCGAATTTGGGAACGTAGTCGAGAGATCGTTAGAAGCAGGAGCTGATGGATTGATGGAAGAAATGGAGGCTTCGCTTGCAGGAGGCAGCAGTAGGACATCAGGGATACCACTGGCAAGACTTGTGCCAAGAGTTGCCCAGATGGGGCCATTGCTCCTTGAAGATCCAATCAAAAGTAGATTCATCCAAATGATAAGAGGTATACCAGAAGCGGAAATATTCTTCACTCTCCTCTATGCAAATATGCCTGCCTCCTAG

Protein sequence

MIEFIKLEIKCARTVTVFCAWTKPNSKRQYDAYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTLPHAIRHLHSRIEEDLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSMKRAQAHFGVYSLLYMTAVLNTFYEERTIRKGGMQSGSSGPVEEADLIDRDDQQKFLAISDFLSNYGLNALIPKMQVAVAEVLKRKQLRDVFNTTILRETTMQIIKIFMSTGSPHHWLDYLMPEDNQSNIKAVLSTDEDAADPNFNKFDQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASLAGGSSRTSGIPLARLVPRVAQMGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMPAS

Homology

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BLAST of MS024308 vs. NCBI nr
Match: XP_022135415.1 (peroxisome biogenesis protein 3-2-like [Momordica charantia] >XP_022135416.1 peroxisome biogenesis protein 3-2-like [Momordica charantia])

HSP 1 Score: 576.6 bits (1485), Expect = 1.5e-160
Identity = 308/345 (89.28%), Postives = 314/345 (91.01%), Query Frame = 0


Query: 28  RQYDAYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTLPHAIRHLHSRIEE 87
           RQYDAYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTLPHAIRHLHSRIEE
Sbjct: 30  RQYDAYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTLPHAIRHLHSRIEE 89

Query: 88  DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSMKRAQAHFGVYSL--LYMTAVLN 147
           DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILS  +        ++  LY+   +N
Sbjct: 90  DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSFTKMVISLWAITVLSLYIRVQVN 149

Query: 148 TFYEERTIRKGGMQSGSSGPVEEADLIDRDDQQKFLAISDFLSNYGLNALIPKMQVAVAE 207
                  I       GSS  +EEADLIDRDDQQKFLAISDFLSNYGLNALIPKMQVAVAE
Sbjct: 150 ILGRHMYI-DTARGFGSSHLLEEADLIDRDDQQKFLAISDFLSNYGLNALIPKMQVAVAE 209

Query: 208 VLKRKQLRDVFNTTILRETTMQIIKIFMSTGSPHHWLDYLMPEDNQSNIKAVLSTDEDAA 267
           VLKRKQLRDVFNTTILRETTMQIIKIFMSTGSPHHWLDYLMPEDNQSNIKAVLSTDEDAA
Sbjct: 210 VLKRKQLRDVFNTTILRETTMQIIKIFMSTGSPHHWLDYLMPEDNQSNIKAVLSTDEDAA 269

Query: 268 DPNFNKFDQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASLAGGSSRTSGIPLAR 327
           DPNFNKFDQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASLAGGSSRTSGIPLAR
Sbjct: 270 DPNFNKFDQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASLAGGSSRTSGIPLAR 329

Query: 328 LVPRVAQMGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMPAS 371
           LVPRVAQMGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMPAS
Sbjct: 330 LVPRVAQMGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMPAS 373

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BLAST of MS024308 vs. NCBI nr
Match: XP_008453453.1 (PREDICTED: peroxisome biogenesis protein 3-2 [Cucumis melo])

HSP 1 Score: 531.2 bits (1367), Expect = 7.2e-147
Identity = 283/345 (82.03%), Postives = 297/345 (86.09%), Query Frame = 0


Query: 28  RQYDAYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTLPHAIRHLHSRIEE 87
           RQYD YSRRLHDIQREL NEREADELIKAQIQAHFENIQRIADTTTLPHAI+HLHSRIEE
Sbjct: 30  RQYDYYSRRLHDIQRELDNEREADELIKAQIQAHFENIQRIADTTTLPHAIQHLHSRIEE 89

Query: 88  DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSMKRAQAHFGVYSL--LYMTAVLN 147
           DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILS  +        ++  LY+   +N
Sbjct: 90  DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSFTKMVISLWAITVLSLYIRVQVN 149

Query: 148 TFYEERTIRKGGMQSGSSGPVEEADLIDRDDQQKFLAISDFLSNYGLNALIPKMQVAVAE 207
                  I       GSS  +EEADLIDRDDQQKFLAISDFL NYGLNALIPK+QVAV E
Sbjct: 150 ILGRHMYI-DTARGLGSSHLLEEADLIDRDDQQKFLAISDFLCNYGLNALIPKLQVAVGE 209

Query: 208 VLKRKQLRDVFNTTILRETTMQIIKIFMSTGSPHHWLDYLMPEDNQSNIKAVLSTDEDAA 267
           VLKRKQLRDVFNTT+LRETT QIIKIFMSTGSPHHWLDYLMP DNQS+I   LSTD+DA 
Sbjct: 210 VLKRKQLRDVFNTTVLRETTTQIIKIFMSTGSPHHWLDYLMPGDNQSSITDTLSTDDDAV 269

Query: 268 DPNFNKFDQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASLAGGSSRTSGIPLAR 327
            PNFNKFDQLMMETRAVLLSAEFGN+VE+SLE G DGLMEEMEASLAG SS+ SGIPLAR
Sbjct: 270 APNFNKFDQLMMETRAVLLSAEFGNIVEKSLEVGVDGLMEEMEASLAGSSSKASGIPLAR 329

Query: 328 LVPRVAQMGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMPAS 371
           LVPRVAQMG LLLEDPIKSRFIQMIRGIPE EIFFTLLYANMPAS
Sbjct: 330 LVPRVAQMGLLLLEDPIKSRFIQMIRGIPEVEIFFTLLYANMPAS 373

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BLAST of MS024308 vs. NCBI nr
Match: XP_038878566.1 (peroxisome biogenesis protein 3-2-like [Benincasa hispida])

HSP 1 Score: 529.6 bits (1363), Expect = 2.1e-146
Identity = 285/345 (82.61%), Postives = 298/345 (86.38%), Query Frame = 0


Query: 28  RQYDAYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTLPHAIRHLHSRIEE 87
           RQYD YSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTLPHAI+HLHSRIEE
Sbjct: 30  RQYDYYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTLPHAIQHLHSRIEE 89

Query: 88  DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSMKRAQAHFGVYSL--LYMTAVLN 147
           DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILS  +        +L  LY+   +N
Sbjct: 90  DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSFTKMVISLWAITLLSLYIRVQVN 149

Query: 148 TFYEERTIRKGGMQSGSSGPVEEADLIDRDDQQKFLAISDFLSNYGLNALIPKMQVAVAE 207
                  I       GSS  +EEADLIDRDDQQKFL+ISDFL NYGLNALIPK+QVAV E
Sbjct: 150 ILGRHMYI-DTARGLGSSHLLEEADLIDRDDQQKFLSISDFLCNYGLNALIPKLQVAVGE 209

Query: 208 VLKRKQLRDVFNTTILRETTMQIIKIFMSTGSPHHWLDYLMPEDNQSNIKAVLSTDEDAA 267
           VLKRKQLRDVFNTTI RETT+QIIKIFMSTGSPHHWLDYLMP DNQS     ++TD DAA
Sbjct: 210 VLKRKQLRDVFNTTIFRETTIQIIKIFMSTGSPHHWLDYLMPGDNQS-----VTTDNDAA 269

Query: 268 DPNFNKFDQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASLAGGSSRTSGIPLAR 327
            PNFNKFDQLMMETRAVLLSAEFGN+VE+SLE G DGLMEEMEASLAGGSSRTSGIPLAR
Sbjct: 270 APNFNKFDQLMMETRAVLLSAEFGNIVEKSLEVGVDGLMEEMEASLAGGSSRTSGIPLAR 329

Query: 328 LVPRVAQMGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMPAS 371
           LVPRVAQMG LLLEDPIKSRFIQMIRGIPE EIFFTLLYANMPAS
Sbjct: 330 LVPRVAQMGLLLLEDPIKSRFIQMIRGIPEVEIFFTLLYANMPAS 368

[Close]

BLAST of MS024308 vs. NCBI nr
Match: XP_011649037.1 (peroxisome biogenesis protein 3-2 [Cucumis sativus] >KGN63852.1 hypothetical protein Csa_013349 [Cucumis sativus])

HSP 1 Score: 524.6 bits (1350), Expect = 6.8e-145
Identity = 278/345 (80.58%), Postives = 296/345 (85.80%), Query Frame = 0


Query: 28  RQYDAYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTLPHAIRHLHSRIEE 87
           RQYD YSRRLHDIQREL NEREADELIKAQIQAHFENIQRIADTTTLPHAI+HLH+RIEE
Sbjct: 30  RQYDYYSRRLHDIQRELDNEREADELIKAQIQAHFENIQRIADTTTLPHAIQHLHNRIEE 89

Query: 88  DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSMKRAQAHFGVYSL--LYMTAVLN 147
           DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILS  +        ++  LY+   +N
Sbjct: 90  DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSFTKMVISLWAITVLSLYIRVQVN 149

Query: 148 TFYEERTIRKGGMQSGSSGPVEEADLIDRDDQQKFLAISDFLSNYGLNALIPKMQVAVAE 207
                  I       GSS  +EEADLIDR+DQQKFLAISDFL NYGLNALIPK+QVAV E
Sbjct: 150 ILGRHMYI-DTARGLGSSHLLEEADLIDREDQQKFLAISDFLCNYGLNALIPKLQVAVGE 209

Query: 208 VLKRKQLRDVFNTTILRETTMQIIKIFMSTGSPHHWLDYLMPEDNQSNIKAVLSTDEDAA 267
           VLKRKQLRDVFNTT+LRETT QIIKIFMST SPHHWLDY+MP DNQS+I   LSTD+DA 
Sbjct: 210 VLKRKQLRDVFNTTVLRETTTQIIKIFMSTASPHHWLDYVMPGDNQSSITDTLSTDDDAV 269

Query: 268 DPNFNKFDQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASLAGGSSRTSGIPLAR 327
            PNFNKFDQLMMETRAVLLS EFGN++ERSLE G DGLMEEMEASLAGGSS+ SGIPLAR
Sbjct: 270 APNFNKFDQLMMETRAVLLSVEFGNIMERSLEVGVDGLMEEMEASLAGGSSKASGIPLAR 329

Query: 328 LVPRVAQMGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMPAS 371
           LVPRVAQMG LLLEDPIKSRFIQMIRGIPE EIFFTLLYANMPA+
Sbjct: 330 LVPRVAQMGLLLLEDPIKSRFIQMIRGIPEVEIFFTLLYANMPAA 373

[Close]

BLAST of MS024308 vs. NCBI nr
Match: KAA0058117.1 (peroxisome biogenesis protein 3-2 [Cucumis melo var. makuwa] >TYK28471.1 peroxisome biogenesis protein 3-2 [Cucumis melo var. makuwa])

HSP 1 Score: 519.2 bits (1336), Expect = 2.8e-143
Identity = 277/338 (81.95%), Postives = 291/338 (86.09%), Query Frame = 0


Query: 35  RRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTLPHAIRHLHSRIEEDLDLSHL 94
           RRLHDIQREL NEREADELIKAQIQAHFENIQRIADTTTLPHAI+HLHSRIEEDLDLSHL
Sbjct: 10  RRLHDIQRELDNEREADELIKAQIQAHFENIQRIADTTTLPHAIQHLHSRIEEDLDLSHL 69

Query: 95  TERLMMGKGQPNTLTLAEKLDLWENLKILSMKRAQAHFGVYSL--LYMTAVLNTFYEERT 154
           TERLMMGKGQPNTLTLAEKLDLWENLKILS  +        ++  LY+   +N       
Sbjct: 70  TERLMMGKGQPNTLTLAEKLDLWENLKILSFTKMVISLWAITVLSLYIRVQVNILGRHMY 129

Query: 155 IRKGGMQSGSSGPVEEADLIDRDDQQKFLAISDFLSNYGLNALIPKMQVAVAEVLKRKQL 214
           I       GSS  +EEADLIDRDDQQKFLAISDFL NYGLNALIPK+QVAV EVLKRKQL
Sbjct: 130 I-DTARGLGSSHLLEEADLIDRDDQQKFLAISDFLCNYGLNALIPKLQVAVGEVLKRKQL 189

Query: 215 RDVFNTTILRETTMQIIKIFMSTGSPHHWLDYLMPEDNQSNIKAVLSTDEDAADPNFNKF 274
           RDVFNTT+LRETT QIIKIFMSTGSPHHWLDYLMP DNQS+I   LSTD+DA  PNFNKF
Sbjct: 190 RDVFNTTVLRETTTQIIKIFMSTGSPHHWLDYLMPGDNQSSITDTLSTDDDAVAPNFNKF 249

Query: 275 DQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASLAGGSSRTSGIPLARLVPRVAQ 334
           DQLMMETRAVLLSAEFGN+VE+SLE G DGLMEEMEASLAG SS+ SGIPLARLVPRVAQ
Sbjct: 250 DQLMMETRAVLLSAEFGNIVEKSLEVGVDGLMEEMEASLAGSSSKASGIPLARLVPRVAQ 309

Query: 335 MGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMPAS 371
           MG LLLEDPIKSRFIQMIRGIPE EIFFTLLYANMPAS
Sbjct: 310 MGLLLLEDPIKSRFIQMIRGIPEVEIFFTLLYANMPAS 346

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BLAST of MS024308 vs. ExPASy Swiss-Prot
Match: Q8S9K7 (Peroxisome biogenesis protein 3-2 OS=Arabidopsis thaliana OX=3702 GN=PEX3-2 PE=2 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 8.8e-79
Identity = 169/357 (47.34%), Postives = 236/357 (66.11%), Query Frame = 0


Query: 15  VTVFCAWTKPNSKRQYDAYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTL 74
           VT  C  +     + Y++++RRL D++RELA+ERE DE+IK Q++AHFE+IQ I D+TTL
Sbjct: 17  VTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFESIQMIVDSTTL 76

Query: 75  PHAIRHLHSRIEEDLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSMKRAQAHFGV 134
           PHA++ L  RI E++D+SH+ +RL  GKG    L+  EKL LW+ LKILS  R       
Sbjct: 77  PHAMQFLSIRISEEIDVSHVMDRLNQGKGM---LSPPEKLQLWDELKILSFTRMVLSLWS 136

Query: 135 YSL--LYMTAVLNTFYEERTIRKGGMQSGSSGPVEEADLIDRDDQQKFLAISDFLSNYGL 194
            ++  LY+   +N       +       GSS  +EE DLIDRDD+QKFL+ +DFL    +
Sbjct: 137 VTMLSLYIRVQVNILGRHLYV-DTARALGSSHLLEEVDLIDRDDEQKFLSSADFLVTNAM 196

Query: 195 NALIPKMQVAVAEVLKRKQLRDVFNTTILRETTMQIIKIFMSTGSPHHWLDYL-MPEDNQ 254
            +LI  MQ +  EVLK KQL+DV  T +L+ET MQI+ +FMSTGSPHHW+DYL MP+D +
Sbjct: 197 PSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTK 256

Query: 255 SNIKAVLSTDEDAADPNFNKFDQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASL 314
                +  T  D++D   +KF QLM+ETR VL+S EF N+VE SL+   D L+EEME   
Sbjct: 257 -----LSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLVEEMETQT 316

Query: 315 AGGSSRTSGIPLARLVPRVAQMGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMP 369
             G   T G PLA+++P++ +   ++  +P K+RF+Q+IR +PE ++FFTLLYANMP
Sbjct: 317 EAGGLAT-GKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYANMP 363

[Close]

BLAST of MS024308 vs. ExPASy Swiss-Prot
Match: Q8LDG7 (Peroxisome biogenesis protein 3-1 OS=Arabidopsis thaliana OX=3702 GN=PEX3-1 PE=2 SV=2)

HSP 1 Score: 290.4 bits (742), Expect = 2.8e-77
Identity = 168/356 (47.19%), Postives = 230/356 (64.61%), Query Frame = 0


Query: 15  VTVFCAWTKPNSKRQYDAYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTL 74
           VT  C  +     + Y+A++R+L D++RELANERE DE+IK Q++AHF+NIQ IADTTTL
Sbjct: 17  VTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQMKAHFDNIQMIADTTTL 76

Query: 75  PHAIRHLHSRIEEDLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSMKRAQAHFGV 134
           PHAI HL SR+ E++D+S + ++L  GKG    L  +EKL LW  LKILS  R       
Sbjct: 77  PHAIHHLSSRVVEEIDVSSIMDKLSKGKG---ILIPSEKLQLWNELKILSFTRMVLSLWS 136

Query: 135 YSL--LYMTAVLNTFYEERTIRKGGMQSGSSGPVEEADLIDRDDQQKFLAISDFLSNYGL 194
            ++  LY+   +N       I       GSS  ++E DLI+RDD+QKFL  +DFL+  G+
Sbjct: 137 VTMLSLYIRVQVNILGRHLYI-DTARGLGSSHLLDELDLIERDDEQKFLTSADFLATSGM 196

Query: 195 NALIPKMQVAVAEVLKRKQLRDVFNTTILRETTMQIIKIFMSTGSPHHWLDYLMPEDNQS 254
            +LI  MQ AV EVLK KQL+DV  T+ LRET M+I+ +FMSTGSPHHW+DYLM   +  
Sbjct: 197 PSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHHWVDYLMMSQD-- 256

Query: 255 NIKAVLSTDEDAADPNFNKFDQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASLA 314
                 +TD  ++D    KF  L+ ETR VL S +F NV E SL+  A  L+EEME    
Sbjct: 257 -----ATTDVSSSDATVTKFHLLITETREVLTSNDFSNVAEISLKCCAVALVEEMETQ-- 316

Query: 315 GGSSRTSGIPLARLVPRVAQMGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMP 369
             +   +G+ LA+L+P++ +  P +  +P K+RF+Q+IR +PE ++FFTLLYANMP
Sbjct: 317 --TGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYANMP 357

[Close]

BLAST of MS024308 vs. ExPASy TrEMBL
Match: A0A6J1C113 (peroxisome biogenesis protein 3-2-like OS=Momordica charantia OX=3673 GN=LOC111007373 PE=4 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 7.3e-161
Identity = 308/345 (89.28%), Postives = 314/345 (91.01%), Query Frame = 0


Query: 28  RQYDAYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTLPHAIRHLHSRIEE 87
           RQYDAYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTLPHAIRHLHSRIEE
Sbjct: 30  RQYDAYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTLPHAIRHLHSRIEE 89

Query: 88  DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSMKRAQAHFGVYSL--LYMTAVLN 147
           DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILS  +        ++  LY+   +N
Sbjct: 90  DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSFTKMVISLWAITVLSLYIRVQVN 149

Query: 148 TFYEERTIRKGGMQSGSSGPVEEADLIDRDDQQKFLAISDFLSNYGLNALIPKMQVAVAE 207
                  I       GSS  +EEADLIDRDDQQKFLAISDFLSNYGLNALIPKMQVAVAE
Sbjct: 150 ILGRHMYI-DTARGFGSSHLLEEADLIDRDDQQKFLAISDFLSNYGLNALIPKMQVAVAE 209

Query: 208 VLKRKQLRDVFNTTILRETTMQIIKIFMSTGSPHHWLDYLMPEDNQSNIKAVLSTDEDAA 267
           VLKRKQLRDVFNTTILRETTMQIIKIFMSTGSPHHWLDYLMPEDNQSNIKAVLSTDEDAA
Sbjct: 210 VLKRKQLRDVFNTTILRETTMQIIKIFMSTGSPHHWLDYLMPEDNQSNIKAVLSTDEDAA 269

Query: 268 DPNFNKFDQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASLAGGSSRTSGIPLAR 327
           DPNFNKFDQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASLAGGSSRTSGIPLAR
Sbjct: 270 DPNFNKFDQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASLAGGSSRTSGIPLAR 329

Query: 328 LVPRVAQMGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMPAS 371
           LVPRVAQMGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMPAS
Sbjct: 330 LVPRVAQMGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMPAS 373

[Close]

BLAST of MS024308 vs. ExPASy TrEMBL
Match: A0A1S3BX33 (peroxisome biogenesis protein 3-2 OS=Cucumis melo OX=3656 GN=LOC103494158 PE=4 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 3.5e-147
Identity = 283/345 (82.03%), Postives = 297/345 (86.09%), Query Frame = 0


Query: 28  RQYDAYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTLPHAIRHLHSRIEE 87
           RQYD YSRRLHDIQREL NEREADELIKAQIQAHFENIQRIADTTTLPHAI+HLHSRIEE
Sbjct: 30  RQYDYYSRRLHDIQRELDNEREADELIKAQIQAHFENIQRIADTTTLPHAIQHLHSRIEE 89

Query: 88  DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSMKRAQAHFGVYSL--LYMTAVLN 147
           DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILS  +        ++  LY+   +N
Sbjct: 90  DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSFTKMVISLWAITVLSLYIRVQVN 149

Query: 148 TFYEERTIRKGGMQSGSSGPVEEADLIDRDDQQKFLAISDFLSNYGLNALIPKMQVAVAE 207
                  I       GSS  +EEADLIDRDDQQKFLAISDFL NYGLNALIPK+QVAV E
Sbjct: 150 ILGRHMYI-DTARGLGSSHLLEEADLIDRDDQQKFLAISDFLCNYGLNALIPKLQVAVGE 209

Query: 208 VLKRKQLRDVFNTTILRETTMQIIKIFMSTGSPHHWLDYLMPEDNQSNIKAVLSTDEDAA 267
           VLKRKQLRDVFNTT+LRETT QIIKIFMSTGSPHHWLDYLMP DNQS+I   LSTD+DA 
Sbjct: 210 VLKRKQLRDVFNTTVLRETTTQIIKIFMSTGSPHHWLDYLMPGDNQSSITDTLSTDDDAV 269

Query: 268 DPNFNKFDQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASLAGGSSRTSGIPLAR 327
            PNFNKFDQLMMETRAVLLSAEFGN+VE+SLE G DGLMEEMEASLAG SS+ SGIPLAR
Sbjct: 270 APNFNKFDQLMMETRAVLLSAEFGNIVEKSLEVGVDGLMEEMEASLAGSSSKASGIPLAR 329

Query: 328 LVPRVAQMGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMPAS 371
           LVPRVAQMG LLLEDPIKSRFIQMIRGIPE EIFFTLLYANMPAS
Sbjct: 330 LVPRVAQMGLLLLEDPIKSRFIQMIRGIPEVEIFFTLLYANMPAS 373

[Close]

BLAST of MS024308 vs. ExPASy TrEMBL
Match: A0A0A0LSS4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024840 PE=4 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 3.3e-145
Identity = 278/345 (80.58%), Postives = 296/345 (85.80%), Query Frame = 0


Query: 28  RQYDAYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTLPHAIRHLHSRIEE 87
           RQYD YSRRLHDIQREL NEREADELIKAQIQAHFENIQRIADTTTLPHAI+HLH+RIEE
Sbjct: 30  RQYDYYSRRLHDIQRELDNEREADELIKAQIQAHFENIQRIADTTTLPHAIQHLHNRIEE 89

Query: 88  DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSMKRAQAHFGVYSL--LYMTAVLN 147
           DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILS  +        ++  LY+   +N
Sbjct: 90  DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSFTKMVISLWAITVLSLYIRVQVN 149

Query: 148 TFYEERTIRKGGMQSGSSGPVEEADLIDRDDQQKFLAISDFLSNYGLNALIPKMQVAVAE 207
                  I       GSS  +EEADLIDR+DQQKFLAISDFL NYGLNALIPK+QVAV E
Sbjct: 150 ILGRHMYI-DTARGLGSSHLLEEADLIDREDQQKFLAISDFLCNYGLNALIPKLQVAVGE 209

Query: 208 VLKRKQLRDVFNTTILRETTMQIIKIFMSTGSPHHWLDYLMPEDNQSNIKAVLSTDEDAA 267
           VLKRKQLRDVFNTT+LRETT QIIKIFMST SPHHWLDY+MP DNQS+I   LSTD+DA 
Sbjct: 210 VLKRKQLRDVFNTTVLRETTTQIIKIFMSTASPHHWLDYVMPGDNQSSITDTLSTDDDAV 269

Query: 268 DPNFNKFDQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASLAGGSSRTSGIPLAR 327
            PNFNKFDQLMMETRAVLLS EFGN++ERSLE G DGLMEEMEASLAGGSS+ SGIPLAR
Sbjct: 270 APNFNKFDQLMMETRAVLLSVEFGNIMERSLEVGVDGLMEEMEASLAGGSSKASGIPLAR 329

Query: 328 LVPRVAQMGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMPAS 371
           LVPRVAQMG LLLEDPIKSRFIQMIRGIPE EIFFTLLYANMPA+
Sbjct: 330 LVPRVAQMGLLLLEDPIKSRFIQMIRGIPEVEIFFTLLYANMPAA 373

[Close]

BLAST of MS024308 vs. ExPASy TrEMBL
Match: A0A5A7UTQ7 (Peroxisome biogenesis protein 3-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001040 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 1.4e-143
Identity = 277/338 (81.95%), Postives = 291/338 (86.09%), Query Frame = 0


Query: 35  RRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTLPHAIRHLHSRIEEDLDLSHL 94
           RRLHDIQREL NEREADELIKAQIQAHFENIQRIADTTTLPHAI+HLHSRIEEDLDLSHL
Sbjct: 10  RRLHDIQRELDNEREADELIKAQIQAHFENIQRIADTTTLPHAIQHLHSRIEEDLDLSHL 69

Query: 95  TERLMMGKGQPNTLTLAEKLDLWENLKILSMKRAQAHFGVYSL--LYMTAVLNTFYEERT 154
           TERLMMGKGQPNTLTLAEKLDLWENLKILS  +        ++  LY+   +N       
Sbjct: 70  TERLMMGKGQPNTLTLAEKLDLWENLKILSFTKMVISLWAITVLSLYIRVQVNILGRHMY 129

Query: 155 IRKGGMQSGSSGPVEEADLIDRDDQQKFLAISDFLSNYGLNALIPKMQVAVAEVLKRKQL 214
           I       GSS  +EEADLIDRDDQQKFLAISDFL NYGLNALIPK+QVAV EVLKRKQL
Sbjct: 130 I-DTARGLGSSHLLEEADLIDRDDQQKFLAISDFLCNYGLNALIPKLQVAVGEVLKRKQL 189

Query: 215 RDVFNTTILRETTMQIIKIFMSTGSPHHWLDYLMPEDNQSNIKAVLSTDEDAADPNFNKF 274
           RDVFNTT+LRETT QIIKIFMSTGSPHHWLDYLMP DNQS+I   LSTD+DA  PNFNKF
Sbjct: 190 RDVFNTTVLRETTTQIIKIFMSTGSPHHWLDYLMPGDNQSSITDTLSTDDDAVAPNFNKF 249

Query: 275 DQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASLAGGSSRTSGIPLARLVPRVAQ 334
           DQLMMETRAVLLSAEFGN+VE+SLE G DGLMEEMEASLAG SS+ SGIPLARLVPRVAQ
Sbjct: 250 DQLMMETRAVLLSAEFGNIVEKSLEVGVDGLMEEMEASLAGSSSKASGIPLARLVPRVAQ 309

Query: 335 MGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMPAS 371
           MG LLLEDPIKSRFIQMIRGIPE EIFFTLLYANMPAS
Sbjct: 310 MGLLLLEDPIKSRFIQMIRGIPEVEIFFTLLYANMPAS 346

[Close]

BLAST of MS024308 vs. ExPASy TrEMBL
Match: A0A6J1JKD3 (peroxisome biogenesis protein 3-2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485371 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.5e-142
Identity = 274/345 (79.42%), Postives = 295/345 (85.51%), Query Frame = 0


Query: 28  RQYDAYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTLPHAIRHLHSRIEE 87
           RQYD YSRRLHDIQ+EL NEREADELIKAQIQAHFENIQRIADTTTLPHA++HLH+RIEE
Sbjct: 39  RQYDYYSRRLHDIQKELDNEREADELIKAQIQAHFENIQRIADTTTLPHALQHLHNRIEE 98

Query: 88  DLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSMKRAQAHFGVYSL--LYMTAVLN 147
           DLDLSHLTERLMMGKG+PNTLTLAEKLDLWE+LKILS  +        +L  LY+   +N
Sbjct: 99  DLDLSHLTERLMMGKGEPNTLTLAEKLDLWESLKILSFTKMVISLWAITLLSLYIRVQVN 158

Query: 148 TFYEERTIRKGGMQSGSSGPVEEADLIDRDDQQKFLAISDFLSNYGLNALIPKMQVAVAE 207
                  I       GSS  +EEADLI+R+DQQKFLAISDFL NYGLNALIPK+QVA  E
Sbjct: 159 ILGRHMYI-DTARGLGSSQLLEEADLINREDQQKFLAISDFLCNYGLNALIPKLQVAAGE 218

Query: 208 VLKRKQLRDVFNTTILRETTMQIIKIFMSTGSPHHWLDYLMPEDNQSNIKAVLSTDEDAA 267
           VLKRKQLRDVFNTT+LR+TT QIIKIFMSTGSPHHWLDYLMP DNQSNI   +STD+DAA
Sbjct: 219 VLKRKQLRDVFNTTVLRDTTTQIIKIFMSTGSPHHWLDYLMPGDNQSNITDTVSTDDDAA 278

Query: 268 DPNFNKFDQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASLAGGSSRTSGIPLAR 327
             NFNKFDQLMMETRAVLLSAEFGNVVE SLE G DGLM+EMEAS+AGGSSRTSGIPLAR
Sbjct: 279 ARNFNKFDQLMMETRAVLLSAEFGNVVETSLEVGVDGLMDEMEASVAGGSSRTSGIPLAR 338

Query: 328 LVPRVAQMGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMPAS 371
           LVPRVAQMG LLLEDPIKSRFI+ IRGIPE EIFFTLLYANMP S
Sbjct: 339 LVPRVAQMGLLLLEDPIKSRFIKTIRGIPEVEIFFTLLYANMPTS 382

[Close]

BLAST of MS024308 vs. TAIR 10
Match: AT1G48635.1 (peroxin 3 )

HSP 1 Score: 295.4 bits (755), Expect = 6.2e-80
Identity = 169/357 (47.34%), Postives = 236/357 (66.11%), Query Frame = 0


Query: 15  VTVFCAWTKPNSKRQYDAYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTL 74
           VT  C  +     + Y++++RRL D++RELA+ERE DE+IK Q++AHFE+IQ I D+TTL
Sbjct: 17  VTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFESIQMIVDSTTL 76

Query: 75  PHAIRHLHSRIEEDLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSMKRAQAHFGV 134
           PHA++ L  RI E++D+SH+ +RL  GKG    L+  EKL LW+ LKILS  R       
Sbjct: 77  PHAMQFLSIRISEEIDVSHVMDRLNQGKGM---LSPPEKLQLWDELKILSFTRMVLSLWS 136

Query: 135 YSL--LYMTAVLNTFYEERTIRKGGMQSGSSGPVEEADLIDRDDQQKFLAISDFLSNYGL 194
            ++  LY+   +N       +       GSS  +EE DLIDRDD+QKFL+ +DFL    +
Sbjct: 137 VTMLSLYIRVQVNILGRHLYV-DTARALGSSHLLEEVDLIDRDDEQKFLSSADFLVTNAM 196

Query: 195 NALIPKMQVAVAEVLKRKQLRDVFNTTILRETTMQIIKIFMSTGSPHHWLDYL-MPEDNQ 254
            +LI  MQ +  EVLK KQL+DV  T +L+ET MQI+ +FMSTGSPHHW+DYL MP+D +
Sbjct: 197 PSLISDMQGSAEEVLKGKQLKDVITTRVLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTK 256

Query: 255 SNIKAVLSTDEDAADPNFNKFDQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASL 314
                +  T  D++D   +KF QLM+ETR VL+S EF N+VE SL+   D L+EEME   
Sbjct: 257 -----LSRTTSDSSDEAVSKFHQLMVETREVLISTEFTNIVEISLKCFTDVLVEEMETQT 316

Query: 315 AGGSSRTSGIPLARLVPRVAQMGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMP 369
             G   T G PLA+++P++ +   ++  +P K+RF+Q+IR +PE ++FFTLLYANMP
Sbjct: 317 EAGGLAT-GKPLAKVLPQIEKTMNVITAEPSKNRFLQIIRDLPEVKLFFTLLYANMP 363

[Close]

BLAST of MS024308 vs. TAIR 10
Match: AT3G18160.1 (peroxin 3-1 )

HSP 1 Score: 290.4 bits (742), Expect = 2.0e-78
Identity = 168/356 (47.19%), Postives = 230/356 (64.61%), Query Frame = 0


Query: 15  VTVFCAWTKPNSKRQYDAYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTL 74
           VT  C  +     + Y+A++R+L D++RELANERE DE+IK Q++AHF+NIQ IADTTTL
Sbjct: 17  VTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQMKAHFDNIQMIADTTTL 76

Query: 75  PHAIRHLHSRIEEDLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSMKRAQAHFGV 134
           PHAI HL SR+ E++D+S + ++L  GKG    L  +EKL LW  LKILS  R       
Sbjct: 77  PHAIHHLSSRVVEEIDVSSIMDKLSKGKG---ILIPSEKLQLWNELKILSFTRMVLSLWS 136

Query: 135 YSL--LYMTAVLNTFYEERTIRKGGMQSGSSGPVEEADLIDRDDQQKFLAISDFLSNYGL 194
            ++  LY+   +N       I       GSS  ++E DLI+RDD+QKFL  +DFL+  G+
Sbjct: 137 VTMLSLYIRVQVNILGRHLYI-DTARGLGSSHLLDELDLIERDDEQKFLTSADFLATSGM 196

Query: 195 NALIPKMQVAVAEVLKRKQLRDVFNTTILRETTMQIIKIFMSTGSPHHWLDYLMPEDNQS 254
            +LI  MQ AV EVLK KQL+DV  T+ LRET M+I+ +FMSTGSPHHW+DYLM   +  
Sbjct: 197 PSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHHWVDYLMMSQD-- 256

Query: 255 NIKAVLSTDEDAADPNFNKFDQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASLA 314
                 +TD  ++D    KF  L+ ETR VL S +F NV E SL+  A  L+EEME    
Sbjct: 257 -----ATTDVSSSDATVTKFHLLITETREVLTSNDFSNVAEISLKCCAVALVEEMETQ-- 316

Query: 315 GGSSRTSGIPLARLVPRVAQMGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMP 369
             +   +G+ LA+L+P++ +  P +  +P K+RF+Q+IR +PE ++FFTLLYANMP
Sbjct: 317 --TGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYANMP 357

[Close]

BLAST of MS024308 vs. TAIR 10
Match: AT3G18160.3 (peroxin 3-1 )

HSP 1 Score: 290.4 bits (742), Expect = 2.0e-78
Identity = 168/356 (47.19%), Postives = 230/356 (64.61%), Query Frame = 0


Query: 15  VTVFCAWTKPNSKRQYDAYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTL 74
           VT  C  +     + Y+A++R+L D++RELANERE DE+IK Q++AHF+NIQ IADTTTL
Sbjct: 35  VTTTCLGSGYLLYKLYNAHTRKLADLERELANERENDEIIKTQMKAHFDNIQMIADTTTL 94

Query: 75  PHAIRHLHSRIEEDLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSMKRAQAHFGV 134
           PHAI HL SR+ E++D+S + ++L  GKG    L  +EKL LW  LKILS  R       
Sbjct: 95  PHAIHHLSSRVVEEIDVSSIMDKLSKGKG---ILIPSEKLQLWNELKILSFTRMVLSLWS 154

Query: 135 YSL--LYMTAVLNTFYEERTIRKGGMQSGSSGPVEEADLIDRDDQQKFLAISDFLSNYGL 194
            ++  LY+   +N       I       GSS  ++E DLI+RDD+QKFL  +DFL+  G+
Sbjct: 155 VTMLSLYIRVQVNILGRHLYI-DTARGLGSSHLLDELDLIERDDEQKFLTSADFLATSGM 214

Query: 195 NALIPKMQVAVAEVLKRKQLRDVFNTTILRETTMQIIKIFMSTGSPHHWLDYLMPEDNQS 254
            +LI  MQ AV EVLK KQL+DV  T+ LRET M+I+ +FMSTGSPHHW+DYLM   +  
Sbjct: 215 PSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILDVFMSTGSPHHWVDYLMMSQD-- 274

Query: 255 NIKAVLSTDEDAADPNFNKFDQLMMETRAVLLSAEFGNVVERSLEAGADGLMEEMEASLA 314
                 +TD  ++D    KF  L+ ETR VL S +F NV E SL+  A  L+EEME    
Sbjct: 275 -----ATTDVSSSDATVTKFHLLITETREVLTSNDFSNVAEISLKCCAVALVEEMETQ-- 334

Query: 315 GGSSRTSGIPLARLVPRVAQMGPLLLEDPIKSRFIQMIRGIPEAEIFFTLLYANMP 369
             +   +G+ LA+L+P++ +  P +  +P K+RF+Q+IR +PE ++FFTLLYANMP
Sbjct: 335 --TGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLIRDLPEVKLFFTLLYANMP 375

[Close]

BLAST of MS024308 vs. TAIR 10
Match: AT1G48635.2 (peroxin 3 )

HSP 1 Score: 280.8 bits (717), Expect = 1.6e-75
Identity = 170/392 (43.37%), Postives = 239/392 (60.97%), Query Frame = 0


Query: 15  VTVFCAWTKPNSKRQYDAYSRRLHDIQRELANEREADELIKAQIQAHFENIQRIADTTTL 74
           VT  C  +     + Y++++RRL D++RELA+ERE DE+IK Q++AHFE+IQ I D+TTL
Sbjct: 17  VTAGCLGSGYLLYKLYNSHTRRLADLERELAHERENDEIIKTQMKAHFESIQMIVDSTTL 76

Query: 75  PHAIRHLHSRIEEDLDLSHLTERLMMGKGQPNTLTLAEKLDLWENLKILSMKRAQAHFGV 134
           PHA++ L  RI E++D+SH+ +RL  GKG    L+  EKL LW+ LKILS  R       
Sbjct: 77  PHAMQFLSIRISEEIDVSHVMDRLNQGKGM---LSPPEKLQLWDELKILSFTRMVLSLWS 136

Query: 135 YSL--LYMTAVLN----------------------------TFYEERTIRKGGMQSGSSG 194
            ++  LY+   +N                            T Y    +    +++ S  
Sbjct: 137 VTMLSLYIRVQVNILGRHLYVDTARALGSSHLLCTLLISSPTSYFSGKLTGCSVKNFSRL 196

Query: 195 PV-------EEADLIDRDDQQKFLAISDFLSNYGLNALIPKMQVAVAEVLKRKQLRDVFN 254
           P        EE DLIDRDD+QKFL+ +DFL    + +LI  MQ +  EVLK KQL+DV  
Sbjct: 197 PFKATAACPEEVDLIDRDDEQKFLSSADFLVTNAMPSLISDMQGSAEEVLKGKQLKDVIT 256

Query: 255 TTILRETTMQIIKIFMSTGSPHHWLDYL-MPEDNQSNIKAVLSTDEDAADPNFNKFDQLM 314
           T +L+ET MQI+ +FMSTGSPHHW+DYL MP+D +     +  T  D++D   +KF QLM
Sbjct: 257 TRVLQETVMQIVDVFMSTGSPHHWVDYLMMPQDTK-----LSRTTSDSSDEAVSKFHQLM 316

Query: 315 METRAVLLSAEFGNVVERSLEAGADGLMEEMEASLAGGSSRTSGIPLARLVPRVAQMGPL 369
           +ETR VL+S EF N+VE SL+   D L+EEME     G   T G PLA+++P++ +   +
Sbjct: 317 VETREVLISTEFTNIVEISLKCFTDVLVEEMETQTEAGGLAT-GKPLAKVLPQIEKTMNV 376

[Close]

BLAST of MS024308 vs. TAIR 10
Match: AT3G18160.2 (peroxin 3-1 )

HSP 1 Score: 255.0 bits (650), Expect = 9.3e-68
Identity = 147/318 (46.23%), Postives = 203/318 (63.84%), Query Frame = 0


Query: 53  LIKAQIQAHFENIQRIADTTTLPHAIRHLHSRIEEDLDLSHLTERLMMGKGQPNTLTLAE 112
           ++  +++AHF+NIQ IADTTTLPHAI HL SR+ E++D+S + ++L  GKG    L  +E
Sbjct: 1   MLYVRMKAHFDNIQMIADTTTLPHAIHHLSSRVVEEIDVSSIMDKLSKGKG---ILIPSE 60

Query: 113 KLDLWENLKILSMKRAQAHFGVYSL--LYMTAVLNTFYEERTIRKGGMQSGSSGPVEEAD 172
           KL LW  LKILS  R        ++  LY+   +N       I       GSS  ++E D
Sbjct: 61  KLQLWNELKILSFTRMVLSLWSVTMLSLYIRVQVNILGRHLYI-DTARGLGSSHLLDELD 120

Query: 173 LIDRDDQQKFLAISDFLSNYGLNALIPKMQVAVAEVLKRKQLRDVFNTTILRETTMQIIK 232
           LI+RDD+QKFL  +DFL+  G+ +LI  MQ AV EVLK KQL+DV  T+ LRET M+I+ 
Sbjct: 121 LIERDDEQKFLTSADFLATSGMPSLISNMQNAVKEVLKGKQLKDVLTTSALRETVMRILD 180

Query: 233 IFMSTGSPHHWLDYLMPEDNQSNIKAVLSTDEDAADPNFNKFDQLMMETRAVLLSAEFGN 292
           +FMSTGSPHHW+DYLM   +        +TD  ++D    KF  L+ ETR VL S +F N
Sbjct: 181 VFMSTGSPHHWVDYLMMSQD-------ATTDVSSSDATVTKFHLLITETREVLTSNDFSN 240

Query: 293 VVERSLEAGADGLMEEMEASLAGGSSRTSGIPLARLVPRVAQMGPLLLEDPIKSRFIQMI 352
           V E SL+  A  L+EEME      +   +G+ LA+L+P++ +  P +  +P K+RF+Q+I
Sbjct: 241 VAEISLKCCAVALVEEMETQ----TGLATGMQLAKLLPQIEKTMPEISAEPEKNRFLQLI 300

Query: 353 RGIPEAEIFFTLLYANMP 369
           R +PE ++FFTLLYANMP
Sbjct: 301 RDLPEVKLFFTLLYANMP 303

The following BLAST results are available for this feature:

BLAST of MS024308 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135415.1	1.5e-160	89.28	peroxisome biogenesis protein 3-2-like [Momordica charantia] >XP_022135416.1 per...	[more]
XP_008453453.1	7.2e-147	82.03	PREDICTED: peroxisome biogenesis protein 3-2 [Cucumis melo]	[more]
XP_038878566.1	2.1e-146	82.61	peroxisome biogenesis protein 3-2-like [Benincasa hispida]	[more]
XP_011649037.1	6.8e-145	80.58	peroxisome biogenesis protein 3-2 [Cucumis sativus] >KGN63852.1 hypothetical pro...	[more]
KAA0058117.1	2.8e-143	81.95	peroxisome biogenesis protein 3-2 [Cucumis melo var. makuwa] >TYK28471.1 peroxis...	[more]

BLAST of MS024308 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S9K7	8.8e-79	47.34	Peroxisome biogenesis protein 3-2 OS=Arabidopsis thaliana OX=3702 GN=PEX3-2 PE=2...	[more]
Q8LDG7	2.8e-77	47.19	Peroxisome biogenesis protein 3-1 OS=Arabidopsis thaliana OX=3702 GN=PEX3-1 PE=2...	[more]

BLAST of MS024308 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C113	7.3e-161	89.28	peroxisome biogenesis protein 3-2-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A1S3BX33	3.5e-147	82.03	peroxisome biogenesis protein 3-2 OS=Cucumis melo OX=3656 GN=LOC103494158 PE=4 S...	[more]
A0A0A0LSS4	3.3e-145	80.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024840 PE=4 SV=1	[more]
A0A5A7UTQ7	1.4e-143	81.95	Peroxisome biogenesis protein 3-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1JKD3	1.5e-142	79.42	peroxisome biogenesis protein 3-2-like isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of MS024308 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48635.1	6.2e-80	47.34	peroxin 3	[more]
AT3G18160.1	2.0e-78	47.19	peroxin 3-1	[more]
AT3G18160.3	2.0e-78	47.19	peroxin 3-1	[more]
AT1G48635.2	1.6e-75	43.37	peroxin 3	[more]
AT3G18160.2	9.3e-68	46.23	peroxin 3-1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 30..50
None	No IPR available	PANTHER	PTHR28080:SF4	PEROXISOME BIOGENESIS PROTEIN 3-2-LIKE	coord: 29..370
IPR006966	Peroxin-3	PFAM	PF04882	Peroxin-3	coord: 167..317 e-value: 1.5E-14 score: 53.9
IPR006966	Peroxin-3	PANTHER	PTHR28080	PEROXISOMAL BIOGENESIS FACTOR 3	coord: 29..370

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS024308.1	MS024308.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007031	peroxisome organization
cellular_component	GO:0005779	integral component of peroxisomal membrane