MS024291 (gene) Bitter gourd (TR) v1

Overview


Name	MS024291
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	pentatricopeptide repeat-containing protein At5g61370, mitochondrial
Location	scaffold30: 1641553 .. 1643034 (+)
RNA-Seq Expression	MS024291
Synteny	MS024291

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGCACGCCATATGTTCGATGAAATTCCGCTGAGAAGATGCGTCTCCGCGTTGAAGTTAAAATGGCAGAGCTTCATTACGCAATCTATCAGCACGGACCATCGCTTCTGCTCCCTTCATTCCACCGTAACTAATGCAGCTTCTGTGGTGGATTTGTGTAAAGTGGTTTCCCGCTCGATCGGTGGCCTAGATGAATTAGAATCCAGTCTGAACAAATGTACAGTATCCTTGACATCTCCACTTGTCACCCAGGTCATTGATTCTTGCAAAAACGAAGCACCCACTAGAAGATTACTCAGGTTTTTCCTGTGGTCTCTCAAGAATTTGAAACATGATTTGGAAGATGAAGATTTCAATCATGCCATCCGCTTATTTGCTCAGAAGAAGGACTACAACGCCATTGATATTTTACTTTCTGATCTTAAGAAAGCTGGCCGGGCAATGGAGGGCGAGACCTTCGGTCTTGTGGCTGAGGCTTTAGTGAAACTGGATAGGGAAGATGAAGCACTGGGCCTTTTCAAGAACTTGGACAAGTACAAGTGTCCCCAAGACCAGTTCACTGTCACTGCAATTGTTACTGCTCTCTGTGCAAAAGGGCATGCCAAGAGAGCAGAAGGGGTTGTTTTGCACCACAGAGACAAGATCTCTGGCAGCAAGAGTTGCATCTATAGAAGCCTCCTATATGGATGGTATGTTCAGAAGAACGCAAAGGAAGCAAGAAGGATACTTAAAGAAATGAAGTCGGATGGAGCCATGCCAGATTCGTTCTGCTACAACACTTTCCTCAGGTGCCTCTGTGAGCAGAATCTTAAGAAGAATCCTTCAGGTCTTGTGCCTGAAGCTTTGAATGTGATGATGGAAATGAGATCCTACAAAATCTCCCCAAACTCAATCAGTTATAATATATTGTTATCTTGTCTTGGTAGGACTAGGAGAGTGAAGGAATCGTGTAGAATTCTCGAGACGATGAAACGATCTGGTTGTCGAGCTGATTGGGTCAGCTATTATCTTGTGGCAAGAGTGTTGTTCCTGACTGGAAGATTTGGGAAAGGGCGCAGGATTGTGGATGAGATGATTGATGAGGGATTGATCCCGGATCGAAAATTTTACTACGATTTGATTGGTATTCTATGTGGAGTTGAGAGAGTAAACTATGCGCTTGAGATGTTGGATAAAATGAAGAGAAGCTCATTGGGGGGTTATGGTCCAGTTTATGATGTGCTAATACCGAAGTTGTGCAGAGGAGGTGATTTTGAAATGGGCAGGCAACTGTGGGAGGAGGCCATGGCTATGGGTCTGAAGCTTCGCTGCTCAAGGGAGGTTTTGGATCCTTCAATCACGAAGGTTTGGCTTCCAACCAGAAAGACTGACAGCAAAATTCTTGAAGAAGTCAATGGTGCTGAGAAGCAGAACCAAGCTGCTGCAACTGACAGACCAAAAGCTAAGGGAAAGAAAAGTAAGAATCTGTCTTTGAAATAA

mRNA sequence

ATGAATGCACGCCATATGTTCGATGAAATTCCGCTGAGAAGATGCGTCTCCGCGTTGAAGTTAAAATGGCAGAGCTTCATTACGCAATCTATCAGCACGGACCATCGCTTCTGCTCCCTTCATTCCACCGTAACTAATGCAGCTTCTGTGGTGGATTTGTGTAAAGTGGTTTCCCGCTCGATCGGTGGCCTAGATGAATTAGAATCCAGTCTGAACAAATGTACAGTATCCTTGACATCTCCACTTGTCACCCAGGTCATTGATTCTTGCAAAAACGAAGCACCCACTAGAAGATTACTCAGGTTTTTCCTGTGGTCTCTCAAGAATTTGAAACATGATTTGGAAGATGAAGATTTCAATCATGCCATCCGCTTATTTGCTCAGAAGAAGGACTACAACGCCATTGATATTTTACTTTCTGATCTTAAGAAAGCTGGCCGGGCAATGGAGGGCGAGACCTTCGGTCTTGTGGCTGAGGCTTTAGTGAAACTGGATAGGGAAGATGAAGCACTGGGCCTTTTCAAGAACTTGGACAAGTACAAGTGTCCCCAAGACCAGTTCACTGTCACTGCAATTGTTACTGCTCTCTGTGCAAAAGGGCATGCCAAGAGAGCAGAAGGGGTTGTTTTGCACCACAGAGACAAGATCTCTGGCAGCAAGAGTTGCATCTATAGAAGCCTCCTATATGGATGGTATGTTCAGAAGAACGCAAAGGAAGCAAGAAGGATACTTAAAGAAATGAAGTCGGATGGAGCCATGCCAGATTCGTTCTGCTACAACACTTTCCTCAGGTGCCTCTGTGAGCAGAATCTTAAGAAGAATCCTTCAGGTCTTGTGCCTGAAGCTTTGAATGTGATGATGGAAATGAGATCCTACAAAATCTCCCCAAACTCAATCAGTTATAATATATTGTTATCTTGTCTTGGTAGGACTAGGAGAGTGAAGGAATCGTGTAGAATTCTCGAGACGATGAAACGATCTGGTTGTCGAGCTGATTGGGTCAGCTATTATCTTGTGGCAAGAGTGTTGTTCCTGACTGGAAGATTTGGGAAAGGGCGCAGGATTGTGGATGAGATGATTGATGAGGGATTGATCCCGGATCGAAAATTTTACTACGATTTGATTGGTATTCTATGTGGAGTTGAGAGAGTAAACTATGCGCTTGAGATGTTGGATAAAATGAAGAGAAGCTCATTGGGGGGTTATGGTCCAGTTTATGATGTGCTAATACCGAAGTTGTGCAGAGGAGGTGATTTTGAAATGGGCAGGCAACTGTGGGAGGAGGCCATGGCTATGGGTCTGAAGCTTCGCTGCTCAAGGGAGGTTTTGGATCCTTCAATCACGAAGGTTTGGCTTCCAACCAGAAAGACTGACAGCAAAATTCTTGAAGAAGTCAATGGTGCTGAGAAGCAGAACCAAGCTGCTGCAACTGACAGACCAAAAGCTAAGGGAAAGAAAAGTAAGAATCTGTCTTTGAAATAA

Coding sequence (CDS)

ATGAATGCACGCCATATGTTCGATGAAATTCCGCTGAGAAGATGCGTCTCCGCGTTGAAGTTAAAATGGCAGAGCTTCATTACGCAATCTATCAGCACGGACCATCGCTTCTGCTCCCTTCATTCCACCGTAACTAATGCAGCTTCTGTGGTGGATTTGTGTAAAGTGGTTTCCCGCTCGATCGGTGGCCTAGATGAATTAGAATCCAGTCTGAACAAATGTACAGTATCCTTGACATCTCCACTTGTCACCCAGGTCATTGATTCTTGCAAAAACGAAGCACCCACTAGAAGATTACTCAGGTTTTTCCTGTGGTCTCTCAAGAATTTGAAACATGATTTGGAAGATGAAGATTTCAATCATGCCATCCGCTTATTTGCTCAGAAGAAGGACTACAACGCCATTGATATTTTACTTTCTGATCTTAAGAAAGCTGGCCGGGCAATGGAGGGCGAGACCTTCGGTCTTGTGGCTGAGGCTTTAGTGAAACTGGATAGGGAAGATGAAGCACTGGGCCTTTTCAAGAACTTGGACAAGTACAAGTGTCCCCAAGACCAGTTCACTGTCACTGCAATTGTTACTGCTCTCTGTGCAAAAGGGCATGCCAAGAGAGCAGAAGGGGTTGTTTTGCACCACAGAGACAAGATCTCTGGCAGCAAGAGTTGCATCTATAGAAGCCTCCTATATGGATGGTATGTTCAGAAGAACGCAAAGGAAGCAAGAAGGATACTTAAAGAAATGAAGTCGGATGGAGCCATGCCAGATTCGTTCTGCTACAACACTTTCCTCAGGTGCCTCTGTGAGCAGAATCTTAAGAAGAATCCTTCAGGTCTTGTGCCTGAAGCTTTGAATGTGATGATGGAAATGAGATCCTACAAAATCTCCCCAAACTCAATCAGTTATAATATATTGTTATCTTGTCTTGGTAGGACTAGGAGAGTGAAGGAATCGTGTAGAATTCTCGAGACGATGAAACGATCTGGTTGTCGAGCTGATTGGGTCAGCTATTATCTTGTGGCAAGAGTGTTGTTCCTGACTGGAAGATTTGGGAAAGGGCGCAGGATTGTGGATGAGATGATTGATGAGGGATTGATCCCGGATCGAAAATTTTACTACGATTTGATTGGTATTCTATGTGGAGTTGAGAGAGTAAACTATGCGCTTGAGATGTTGGATAAAATGAAGAGAAGCTCATTGGGGGGTTATGGTCCAGTTTATGATGTGCTAATACCGAAGTTGTGCAGAGGAGGTGATTTTGAAATGGGCAGGCAACTGTGGGAGGAGGCCATGGCTATGGGTCTGAAGCTTCGCTGCTCAAGGGAGGTTTTGGATCCTTCAATCACGAAGGTTTGGCTTCCAACCAGAAAGACTGACAGCAAAATTCTTGAAGAAGTCAATGGTGCTGAGAAGCAGAACCAAGCTGCTGCAACTGACAGACCAAAAGCTAAGGGAAAGAAAAGTAAGAATCTGTCTTTGAAATAA

Protein sequence

MNARHMFDEIPLRRCVSALKLKWQSFITQSISTDHRFCSLHSTVTNAASVVDLCKVVSRSIGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWSLKNLKHDLEDEDFNHAIRLFAQKKDYNAIDILLSDLKKAGRAMEGETFGLVAEALVKLDREDEALGLFKNLDKYKCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYRSLLYGWYVQKNAKEARRILKEMKSDGAMPDSFCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYKISPNSISYNILLSCLGRTRRVKESCRILETMKRSGCRADWVSYYLVARVLFLTGRFGKGRRIVDEMIDEGLIPDRKFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLKLRCSREVLDPSITKVWLPTRKTDSKILEEVNGAEKQNQAAATDRPKAKGKKSKNLSLK

Homology

[Close]

BLAST of MS024291 vs. NCBI nr
Match: XP_022134610.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Momordica charantia])

HSP 1 Score: 978.4 bits (2528), Expect = 2.3e-281
Identity = 488/493 (98.99%), Postives = 488/493 (98.99%), Query Frame = 0


Query: 1   MNARHMFDEIPLRRCVSALKLKWQSFITQSISTDHRFCSLHSTVTNAASVVDLCKVVSRS 60
           MNARHMFDEIPLRRCVSALKLKWQSFITQSISTD RFCSLHSTVTNAASVVDLCKVVS S
Sbjct: 1   MNARHMFDEIPLRRCVSALKLKWQSFITQSISTDLRFCSLHSTVTNAASVVDLCKVVSCS 60

Query: 61  IGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWSLKNLKHDLEDEDFN 120
           IGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWSLKNLKHDLEDEDFN
Sbjct: 61  IGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWSLKNLKHDLEDEDFN 120

Query: 121 HAIRLFAQKKDYNAIDILLSDLKKAGRAMEGETFGLVAEALVKLDREDEALGLFKNLDKY 180
           HAIRLFAQKKDYNAIDILLSDLKKAGRAMEGETFGLVAEALVKLDREDEALGLFKNLDKY
Sbjct: 121 HAIRLFAQKKDYNAIDILLSDLKKAGRAMEGETFGLVAEALVKLDREDEALGLFKNLDKY 180

Query: 181 KCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYRSLLYGWYVQKNAKEA 240
           KCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYRSLLYGWYVQ NAKEA
Sbjct: 181 KCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYRSLLYGWYVQNNAKEA 240

Query: 241 RRILKEMKSDGAMPDSFCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYKISPNSIS 300
           RRILKEMKSDGAMPD FCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYKISPNSIS
Sbjct: 241 RRILKEMKSDGAMPDLFCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYKISPNSIS 300

Query: 301 YNILLSCLGRTRRVKESCRILETMKRSGCRADWVSYYLVARVLFLTGRFGKGRRIVDEMI 360
           YNILLSCLGRTRRVKESCRILETMKRSGCRADWVSYYLVARVLFLTGRFGKGRRIVDEMI
Sbjct: 301 YNILLSCLGRTRRVKESCRILETMKRSGCRADWVSYYLVARVLFLTGRFGKGRRIVDEMI 360

Query: 361 DEGLIPDRKFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           DEGLIPD KFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGPVYDVLIPKLCRGGDFE
Sbjct: 361 DEGLIPDXKFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420

Query: 421 MGRQLWEEAMAMGLKLRCSREVLDPSITKVWLPTRKTDSKILEEVNGAEKQNQAAATDRP 480
           MGRQLWEEAMAMGLKLRCSREVLDPSITKVWLPTRKTDSKILEEVNGAEKQNQAAATDRP
Sbjct: 421 MGRQLWEEAMAMGLKLRCSREVLDPSITKVWLPTRKTDSKILEEVNGAEKQNQAAATDRP 480

Query: 481 KAKGKKSKNLSLK 494
           KAKGKKSKNLSLK
Sbjct: 481 KAKGKKSKNLSLK 493

[Close]

BLAST of MS024291 vs. NCBI nr
Match: XP_022987424.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita maxima])

HSP 1 Score: 835.5 bits (2157), Expect = 2.4e-238
Identity = 414/491 (84.32%), Postives = 445/491 (90.63%), Query Frame = 0


Query: 1   MNARHMFDEIPLRRCVSALKLKWQSFITQSISTDHRFCSLHSTVTNAASVVDLCKVVSRS 60
           M+ARHMFDE+ LRRCVS LKLKW SF  QS+ T HRFCSLHSTV N ASV  LC+VVS +
Sbjct: 8   MHARHMFDEMSLRRCVSLLKLKWDSFFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 67

Query: 61  IGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWSLKNLKHDLEDEDFN 120
           IGGLDELE++LNKCTVSLTS LVTQVIDSCKNEAP RRLLRFF WSLK L H LEDEDFN
Sbjct: 68  IGGLDELEATLNKCTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHHLEDEDFN 127

Query: 121 HAIRLFAQKKDYNAIDILLSDLKKAGRAMEGETFGLVAEALVKLDREDEALGLFKNLDKY 180
           +AIRLFAQKKDY AIDILLSDLKKA RAM+G+TFGLVAEALVK+DREDEALGLFKNLDKY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187

Query: 181 KCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYRSLLYGWYVQKNAKEA 240
           KCP DQFTVTAI+TALCAKGHAKRAEGVVLHH+DKISG+ SCIYRSLLYGW +QKN KEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247

Query: 241 RRILKEMKSDGAMPDSFCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYKISPNSIS 300
           RRILKEMKSDG MPD F YNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSY I+PNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307

Query: 301 YNILLSCLGRTRRVKESCRILETMKRSGCRADWVSYYLVARVLFLTGRFGKGRRIVDEMI 360
           YNILLSCLGR RRVKESCRILETMKR+GCR D +SYYLVARVLFL+GRFGKG RIV+EMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367

Query: 361 DEGLIPDRKFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           +EGLIPDRKFYYDLIGILCGVER  YALE+ +KMKRSSLGGYGPVYDVLIPKLC GGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVEREKYALELFEKMKRSSLGGYGPVYDVLIPKLCSGGDFE 427

Query: 421 MGRQLWEEAMAMGLKLRCSREVLDPSITKVWLPTRKTDSKILEEVNGAEKQNQAAATDRP 480
           MGRQLW EAMAMG+ LRCS +VLDPSITKV+ PTRK D++ LEE N AEKQN+ AATD+ 
Sbjct: 428 MGRQLWGEAMAMGITLRCSSDVLDPSITKVFKPTRKIDNQNLEECNRAEKQNK-AATDKS 487

Query: 481 KAKGKKSKNLS 492
           KA+GKKSKNLS
Sbjct: 488 KARGKKSKNLS 497

[Close]

BLAST of MS024291 vs. NCBI nr
Match: KAG6589519.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 825.9 bits (2132), Expect = 1.9e-235
Identity = 412/491 (83.91%), Postives = 442/491 (90.02%), Query Frame = 0


Query: 1   MNARHMFDEIPLRRCVSALKLKWQSFITQSISTDHRFCSLHSTVTNAASVVDLCKVVSRS 60
           MNAR MFDE  LRRCVS LKLKW     QS+ T HRFCSLHSTV N ASV  LC+VVS +
Sbjct: 8   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTLHRFCSLHSTVKNGASVSKLCEVVSCT 67

Query: 61  IGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWSLKNLKHDLEDEDFN 120
           IGGLDELE++LNKCTVSLTS LVTQVIDSCKNEAP RRLLRFF WSLK L HDLEDEDFN
Sbjct: 68  IGGLDELEATLNKCTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 127

Query: 121 HAIRLFAQKKDYNAIDILLSDLKKAGRAMEGETFGLVAEALVKLDREDEALGLFKNLDKY 180
           +AIRLFAQKKDY AIDILLSDLKKA RAM+G+TFGLVAEALVK+DREDEALGLFKNLDKY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187

Query: 181 KCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYRSLLYGWYVQKNAKEA 240
           KCP DQFTVTAI+TALCAKGHAKRAEGVVLHH+DKISG+ SCIYRSLLYGW +QKN KEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247

Query: 241 RRILKEMKSDGAMPDSFCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYKISPNSIS 300
           RRILKEMKSDG MPD F YNTFLRCL EQNLKKNPSGLVPEALNVMMEMRSY I+PNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLSEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307

Query: 301 YNILLSCLGRTRRVKESCRILETMKRSGCRADWVSYYLVARVLFLTGRFGKGRRIVDEMI 360
           YNILLSCLGR RRVKESCRILETMKR+GCR D +SYYLVARVLFL+GRFGKG RIV+EMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367

Query: 361 DEGLIPDRKFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           +EGLIPDRKFYYDLIGILCGVE   YALE+ +KMKRSSLGGYGPVYDVLIPKLCRGGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 427

Query: 421 MGRQLWEEAMAMGLKLRCSREVLDPSITKVWLPTRKTDSKILEEVNGAEKQNQAAATDRP 480
           MGRQLWEEAMAMGL LRCS +VLDPSITKV+ PTRK D++ LEE + AEKQN+ AATD+ 
Sbjct: 428 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESSRAEKQNK-AATDKS 487

Query: 481 KAKGKKSKNLS 492
           KA+GK+SKNLS
Sbjct: 488 KARGKRSKNLS 497

[Close]

BLAST of MS024291 vs. NCBI nr
Match: XP_022921576.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita moschata])

HSP 1 Score: 823.5 bits (2126), Expect = 9.4e-235
Identity = 411/491 (83.71%), Postives = 441/491 (89.82%), Query Frame = 0


Query: 1   MNARHMFDEIPLRRCVSALKLKWQSFITQSISTDHRFCSLHSTVTNAASVVDLCKVVSRS 60
           MNAR MFDE  LRRCVS LKLKW     QS+ T HRFCSLHSTV N ASV  LC+VVS +
Sbjct: 8   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 67

Query: 61  IGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWSLKNLKHDLEDEDFN 120
           IGGLDELE++LNK TVSLTS LVTQVIDSCKNEAP RRLLRFF WSLK L HDLEDEDFN
Sbjct: 68  IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 127

Query: 121 HAIRLFAQKKDYNAIDILLSDLKKAGRAMEGETFGLVAEALVKLDREDEALGLFKNLDKY 180
           +AIRLFAQKKDY AIDILLSDLKKA RAM+G+TFGLVAEALVK+DREDEALGLFKNLDKY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187

Query: 181 KCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYRSLLYGWYVQKNAKEA 240
           KCP DQFTVTAI+TALCAKGHAKRAEGVVLHH+DKISG+ SCIYRSLLYGW +QKN KEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247

Query: 241 RRILKEMKSDGAMPDSFCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYKISPNSIS 300
           RRILKEMKSDG MPD F YNTFLRCL EQNLKKNPSGLVPEALNVMMEMRSY I+PNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLSEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307

Query: 301 YNILLSCLGRTRRVKESCRILETMKRSGCRADWVSYYLVARVLFLTGRFGKGRRIVDEMI 360
           YNILLSCLGR RRVKESCRILETMKR+GCR D +SYYLVARVLFL+GRFGKG RIV+EMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367

Query: 361 DEGLIPDRKFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           +EGLIPDRKFYYDLIGILCGVE   YALE+ +KMKRSSLGGYGPVYDVLIPKLCRGGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 427

Query: 421 MGRQLWEEAMAMGLKLRCSREVLDPSITKVWLPTRKTDSKILEEVNGAEKQNQAAATDRP 480
           MGRQLWEEAMAMGL LRCS +VLDPSITKV+ PTRK D++ LEE + AEKQN+ AATD+ 
Sbjct: 428 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESSRAEKQNK-AATDKS 487

Query: 481 KAKGKKSKNLS 492
           KA+GK+SKNLS
Sbjct: 488 KARGKRSKNLS 497

[Close]

BLAST of MS024291 vs. NCBI nr
Match: XP_023516447.1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 820.1 bits (2117), Expect = 1.0e-233
Identity = 409/491 (83.30%), Postives = 440/491 (89.61%), Query Frame = 0


Query: 1   MNARHMFDEIPLRRCVSALKLKWQSFITQSISTDHRFCSLHSTVTNAASVVDLCKVVSRS 60
           M+AR MFDE+ LRRCVS  KLKW SF  QS+ T HRFCSLHSTV N  SV  LC+VVS +
Sbjct: 8   MHARQMFDEMSLRRCVSLFKLKWASFFVQSVCTGHRFCSLHSTVRNGDSVSKLCEVVSCT 67

Query: 61  IGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWSLKNLKHDLEDEDFN 120
           IGGLDELE +LNK  VSLTS LVTQVIDSCKNEAP RRLLRFF WSLK L HDLEDEDFN
Sbjct: 68  IGGLDELEGTLNKFPVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 127

Query: 121 HAIRLFAQKKDYNAIDILLSDLKKAGRAMEGETFGLVAEALVKLDREDEALGLFKNLDKY 180
           +AIRLFAQKKDY AIDILLSDLKKA RAM+G+TFGLVAEALVK+ REDEALGLFKNLDKY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMGREDEALGLFKNLDKY 187

Query: 181 KCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYRSLLYGWYVQKNAKEA 240
           KCP DQFTVTAI+TALCAKGHAKRAEGVVLHH+DKISG+ SCIYRSLLYGW +QKN KEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247

Query: 241 RRILKEMKSDGAMPDSFCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYKISPNSIS 300
           RRILKEMKSDG MPD F +NTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSY I+PNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSFNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYNIAPNSIS 307

Query: 301 YNILLSCLGRTRRVKESCRILETMKRSGCRADWVSYYLVARVLFLTGRFGKGRRIVDEMI 360
           YNILLSCLGR RRVKESCRILETMKR+GCR D +SYYLVARVLFL+GRFGKG RIV+EMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367

Query: 361 DEGLIPDRKFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           +EGLIPDRKFYYDLIGILCGVE   YALE+ +KMKRSSLGGYGPVYDVLIPKLCRGGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 427

Query: 421 MGRQLWEEAMAMGLKLRCSREVLDPSITKVWLPTRKTDSKILEEVNGAEKQNQAAATDRP 480
           MGRQLWEEAMAMGL LRCS +VLDPSITKV+ PTRK D++ LEE + AEKQN+ AATD+ 
Sbjct: 428 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQGLEESSRAEKQNK-AATDKS 487

Query: 481 KAKGKKSKNLS 492
           KA+GKKSKNLS
Sbjct: 488 KARGKKSKNLS 497

[Close]

BLAST of MS024291 vs. ExPASy Swiss-Prot
Match: Q9FLJ6 (Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61370 PE=2 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 4.2e-161
Identity = 272/482 (56.43%), Postives = 373/482 (77.39%), Query Frame = 0


Query: 17  SALKLKWQSFITQSISTDHRFCSLHSTVTNAASVVDLCKVVSRSIGGLDELESSLNKCTV 76
           + ++L   +++T +      FCS H    +  ++ ++ ++VS  +GGLD+LE +LN+ +V
Sbjct: 4   TTVRLNRFTYLTSTAKLTRYFCSHHLVDRSETALHEVIRIVSSPVGGLDDLEENLNQVSV 63

Query: 77  SLTSPLVTQVIDSCKNEAPTRRLLRFFLWSLKNLKHDLEDEDFNHAIRLFAQKKDYNAID 136
           S +S LVTQVI+SCKNE   RRLLRFF WS K+L   L D++FN+ +R+ A+KKD+ A+ 
Sbjct: 64  SPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQ 123

Query: 137 ILLSDLKKAGRAMEGETFGLVAEALVKLDREDEALGLFKNLDKYKCPQDQFTVTAIVTAL 196
           ILLSDL+K  RAM+ +TF +VAE LVK+ +E++A+G+FK LDK+ CPQD FTVTAI++AL
Sbjct: 124 ILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISAL 183

Query: 197 CAKGHAKRAEGVVLHHRDKISGSKSCIYRSLLYGWYVQKNAKEARRILKEMKSDGAMPDS 256
           C++GH KRA GV+ HH+D ISG++  +YRSLL+GW VQ+N KEARR++++MKS G  PD 
Sbjct: 184 CSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDL 243

Query: 257 FCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYKISPNSISYNILLSCLGRTRRVKE 316
           FC+N+ L CLCE+N+ +NPSGLVPEALN+M+EMRSYKI P S+SYNILLSCLGRTRRV+E
Sbjct: 244 FCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRE 303

Query: 317 SCRILETMKRSGCRADWVSYYLVARVLFLTGRFGKGRRIVDEMIDEGLIPDRKFYYDLIG 376
           SC+ILE MKRSGC  D  SYY V RVL+LTGRFGKG +IVDEMI+ G  P+RKFYYDLIG
Sbjct: 304 SCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIG 363

Query: 377 ILCGVERVNYALEMLDKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLKL 436
           +LCGVERVN+AL++ +KMKRSS+GGYG VYD+LIPKLC+GG+FE GR+LWEEA+++ + L
Sbjct: 364 VLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTL 423

Query: 437 RCSREVLDPSITKVWLPTR-KTDSKILE------EVNGAEKQNQAAATDRPKAKGK-KSK 491
            CS  +LDPS+T+V+ P + K ++ +++      +++    + +     +PK + K K K
Sbjct: 424 SCSISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLKLKPKRRSKTKKK 483

[Close]

BLAST of MS024291 vs. ExPASy Swiss-Prot
Match: Q9FME4 (Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PNM1 PE=1 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 8.2e-40
Identity = 105/377 (27.85%), Postives = 182/377 (48.28%), Query Frame = 0


Query: 97  RRLLRFFLWSLKNLKHDLEDEDFNHAIRLFAQKKDYNAIDILLSDLKKAGRAMEGETFGL 156
           R  L F  W   N      DE  +  +  F ++KD+     +L  + K      G+T   
Sbjct: 124 RAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKG---MLEIISKYKGIAGGKTLES 183

Query: 157 VAEALVKLDREDEALGLFKNLDK-YKCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDK 216
             + LV+  R  +    F+ ++  Y   +D+ ++T +V  LC KGHA  AE +V +  ++
Sbjct: 184 AIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANE 243

Query: 217 ISGSKSCIYRSLLYGWYVQKNAKEARRILKEMKSDGAMPDSFCYNTFLRCLCEQNLKKNP 276
           I   ++ I   L+ GW + +   EA R+  EM   G    +  YN  L C+C+   KK+P
Sbjct: 244 IFPDEN-ICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDP 303

Query: 277 SGLVPEALNVMMEMRSYKISPNSISYNILLSCLGRTRRVKESCRILETMKRSGCRADWVS 336
             L PE   V++EM    +  N+ ++N+L++ L + RR +E+  +   M   GC+ D  +
Sbjct: 304 FKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAET 363

Query: 337 YYLVARVLFLTGRFGKGRRIVDEMIDEGL--IPDRKFYYDLIGILCGVERVNYALEMLDK 396
           Y ++ R L+   R G+G  ++D+M   G   + ++K YY  + ILCG+ER+ +A+ +   
Sbjct: 364 YLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKS 423

Query: 397 MKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLKLRCSREVLDPSITKVWLP 456
           MK +        YD+L+ K+C          L++EA   G+ +      +DP   K    
Sbjct: 424 MKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRVDPRFMK--KK 483

Query: 457 TRKTDSKILEEVNGAEK 471
           T++ DS + +     EK
Sbjct: 484 TKEVDSNVKKRETLPEK 494

[Close]

BLAST of MS024291 vs. ExPASy Swiss-Prot
Match: P0C8A0 (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 6.1e-35
Identity = 100/390 (25.64%), Postives = 181/390 (46.41%), Query Frame = 0


Query: 47  AASVVDLCKVVSRSIGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWS 106
           A  V  + +++      + +LE +LN+  + L   L+ +V+  C +        RFFLW+
Sbjct: 64  AGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLG--YRFFLWA 123

Query: 107 LKNLKHDLEDEDFNHAIRLFAQKKDYNAIDILLSDLKKAG-RAMEGETFGLVAEALVKLD 166
            K   +    E     + + ++ + + A+  L+ +++K     +E E F ++       +
Sbjct: 124 TKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASAN 183

Query: 167 REDEALGLFKNLDKYKCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYR 226
              +A+ +   + KY    D++    ++ ALC  G  K A  V    R+K   +    + 
Sbjct: 184 MVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLR-YFT 243

Query: 227 SLLYGWYVQKNAKEARRILKEMKSDGAMPDSFCYNTFLRCLCEQNLKKNPSGLVPEALNV 286
           SLLYGW  +    EA+ +L +MK  G  PD   +   L            +G + +A ++
Sbjct: 244 SLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAH-------AGKMADAYDL 303

Query: 287 MMEMRSYKISPNSISYNILLSCLGRT-RRVKESCRILETMKRSGCRADWVSYYLVARVLF 346
           M +MR     PN   Y +L+  L RT +R+ E+ R+   M+R GC AD V+Y  +     
Sbjct: 304 MNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFC 363

Query: 347 LTGRFGKGRRIVDEMIDEGLIPDRKFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGP 406
             G   KG  ++D+M  +G++P +  Y  ++      E+    LE+++KMKR        
Sbjct: 364 KWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLL 423

Query: 407 VYDVLIPKLCRGGDFEMGRQLWEEAMAMGL 435
           +Y+V+I   C+ G+ +   +LW E  A GL
Sbjct: 424 IYNVVIRLACKLGEVKEAVRLWNEMEANGL 443

[Close]

BLAST of MS024291 vs. ExPASy Swiss-Prot
Match: Q9LUJ4 (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 1.1e-23
Identity = 83/367 (22.62%), Postives = 164/367 (44.69%), Query Frame = 0


Query: 53  LCKVVSRSIGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWSLKNLKH 112
           +C  +++     +++   L+KC V +T  LV QV+    N     +   FF+W+     +
Sbjct: 105 VCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSN--GWNQAYGFFIWANSQTGY 164

Query: 113 DLEDEDFNHAIRLFAQKKDYNAIDILLSDLKK--AGRAMEGETFGLVAEALVKLDREDEA 172
                 +N  + +  + ++++ +  L++++ K    + +  +T   V   L K  + ++A
Sbjct: 165 VHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKA 224

Query: 173 LGLFKNLDK-YKCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYRSLLY 232
           +  F  ++K Y    D   + +++ AL  +   + A  V L   D I    +  +  L++
Sbjct: 225 VDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIK-PDARTFNILIH 284

Query: 233 GWYVQKNAKEARRILKEMKSDGAMPDSFCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEM 292
           G+   +   +AR ++  MK     PD   Y +F+   C++       G       ++ EM
Sbjct: 285 GFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKE-------GDFRRVNEMLEEM 344

Query: 293 RSYKISPNSISYNILLSCLGRTRRVKESCRILETMKRSGCRADWVSYYLVARVLFLTGRF 352
           R    +PN ++Y I++  LG++++V E+  + E MK  GC  D   Y  +  +L  TGRF
Sbjct: 345 RENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRF 404

Query: 353 GKGRRIVDEMIDEGLIPDRKFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGPVYDVL 412
                I ++M ++G+  D   Y  +I       R   AL +L +M+        P  +  
Sbjct: 405 KDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETY 461

Query: 413 IP--KLC 415
            P  K+C
Sbjct: 465 APLLKMC 461

[Close]

BLAST of MS024291 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 7.0e-23
Identity = 70/284 (24.65%), Postives = 124/284 (43.66%), Query Frame = 0


Query: 153 TFGLVAEALVKLDREDEALGLFKNLDKYKCPQDQFTVTAIVTALCAKGHAKRAEGVVLHH 212
           T+  V   L KL    EA+ +   +    C  +  T   +++ LC +   + A  +    
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391

Query: 213 RDKISGSKSCIYRSLLYGWYVQKNAKEARRILKEMKSDGAMPDSFCYNTFLRCLCEQNLK 272
             K      C + SL+ G  + +N + A  + +EM+S G  PD F YN  +  LC +   
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK--- 451

Query: 273 KNPSGLVPEALNVMMEMRSYKISPNSISYNILLSCLGRTRRVKESCRILETMKRSGCRAD 332
               G + EALN++ +M     + + I+YN L+    +  + +E+  I + M+  G   +
Sbjct: 452 ----GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 511

Query: 333 WVSYYLVARVLFLTGRFGKGRRIVDEMIDEGLIPDRKFYYDLIGILCGVERVNYALEMLD 392
            V+Y  +   L  + R     +++D+MI EG  PD+  Y  L+   C    +  A +++ 
Sbjct: 512 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 571

Query: 393 KMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLKL 437
            M  +        Y  LI  LC+ G  E+  +L       G+ L
Sbjct: 572 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608

[Close]

BLAST of MS024291 vs. ExPASy TrEMBL
Match: A0A6J1BYQ1 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111006837 PE=4 SV=1)

HSP 1 Score: 978.4 bits (2528), Expect = 1.1e-281
Identity = 488/493 (98.99%), Postives = 488/493 (98.99%), Query Frame = 0


Query: 1   MNARHMFDEIPLRRCVSALKLKWQSFITQSISTDHRFCSLHSTVTNAASVVDLCKVVSRS 60
           MNARHMFDEIPLRRCVSALKLKWQSFITQSISTD RFCSLHSTVTNAASVVDLCKVVS S
Sbjct: 1   MNARHMFDEIPLRRCVSALKLKWQSFITQSISTDLRFCSLHSTVTNAASVVDLCKVVSCS 60

Query: 61  IGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWSLKNLKHDLEDEDFN 120
           IGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWSLKNLKHDLEDEDFN
Sbjct: 61  IGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWSLKNLKHDLEDEDFN 120

Query: 121 HAIRLFAQKKDYNAIDILLSDLKKAGRAMEGETFGLVAEALVKLDREDEALGLFKNLDKY 180
           HAIRLFAQKKDYNAIDILLSDLKKAGRAMEGETFGLVAEALVKLDREDEALGLFKNLDKY
Sbjct: 121 HAIRLFAQKKDYNAIDILLSDLKKAGRAMEGETFGLVAEALVKLDREDEALGLFKNLDKY 180

Query: 181 KCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYRSLLYGWYVQKNAKEA 240
           KCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYRSLLYGWYVQ NAKEA
Sbjct: 181 KCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYRSLLYGWYVQNNAKEA 240

Query: 241 RRILKEMKSDGAMPDSFCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYKISPNSIS 300
           RRILKEMKSDGAMPD FCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYKISPNSIS
Sbjct: 241 RRILKEMKSDGAMPDLFCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYKISPNSIS 300

Query: 301 YNILLSCLGRTRRVKESCRILETMKRSGCRADWVSYYLVARVLFLTGRFGKGRRIVDEMI 360
           YNILLSCLGRTRRVKESCRILETMKRSGCRADWVSYYLVARVLFLTGRFGKGRRIVDEMI
Sbjct: 301 YNILLSCLGRTRRVKESCRILETMKRSGCRADWVSYYLVARVLFLTGRFGKGRRIVDEMI 360

Query: 361 DEGLIPDRKFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           DEGLIPD KFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGPVYDVLIPKLCRGGDFE
Sbjct: 361 DEGLIPDXKFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420

Query: 421 MGRQLWEEAMAMGLKLRCSREVLDPSITKVWLPTRKTDSKILEEVNGAEKQNQAAATDRP 480
           MGRQLWEEAMAMGLKLRCSREVLDPSITKVWLPTRKTDSKILEEVNGAEKQNQAAATDRP
Sbjct: 421 MGRQLWEEAMAMGLKLRCSREVLDPSITKVWLPTRKTDSKILEEVNGAEKQNQAAATDRP 480

Query: 481 KAKGKKSKNLSLK 494
           KAKGKKSKNLSLK
Sbjct: 481 KAKGKKSKNLSLK 493

[Close]

BLAST of MS024291 vs. ExPASy TrEMBL
Match: A0A6J1JIV3 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484976 PE=4 SV=1)

HSP 1 Score: 835.5 bits (2157), Expect = 1.2e-238
Identity = 414/491 (84.32%), Postives = 445/491 (90.63%), Query Frame = 0


Query: 1   MNARHMFDEIPLRRCVSALKLKWQSFITQSISTDHRFCSLHSTVTNAASVVDLCKVVSRS 60
           M+ARHMFDE+ LRRCVS LKLKW SF  QS+ T HRFCSLHSTV N ASV  LC+VVS +
Sbjct: 8   MHARHMFDEMSLRRCVSLLKLKWDSFFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 67

Query: 61  IGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWSLKNLKHDLEDEDFN 120
           IGGLDELE++LNKCTVSLTS LVTQVIDSCKNEAP RRLLRFF WSLK L H LEDEDFN
Sbjct: 68  IGGLDELEATLNKCTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHHLEDEDFN 127

Query: 121 HAIRLFAQKKDYNAIDILLSDLKKAGRAMEGETFGLVAEALVKLDREDEALGLFKNLDKY 180
           +AIRLFAQKKDY AIDILLSDLKKA RAM+G+TFGLVAEALVK+DREDEALGLFKNLDKY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187

Query: 181 KCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYRSLLYGWYVQKNAKEA 240
           KCP DQFTVTAI+TALCAKGHAKRAEGVVLHH+DKISG+ SCIYRSLLYGW +QKN KEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247

Query: 241 RRILKEMKSDGAMPDSFCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYKISPNSIS 300
           RRILKEMKSDG MPD F YNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSY I+PNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307

Query: 301 YNILLSCLGRTRRVKESCRILETMKRSGCRADWVSYYLVARVLFLTGRFGKGRRIVDEMI 360
           YNILLSCLGR RRVKESCRILETMKR+GCR D +SYYLVARVLFL+GRFGKG RIV+EMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367

Query: 361 DEGLIPDRKFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           +EGLIPDRKFYYDLIGILCGVER  YALE+ +KMKRSSLGGYGPVYDVLIPKLC GGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVEREKYALELFEKMKRSSLGGYGPVYDVLIPKLCSGGDFE 427

Query: 421 MGRQLWEEAMAMGLKLRCSREVLDPSITKVWLPTRKTDSKILEEVNGAEKQNQAAATDRP 480
           MGRQLW EAMAMG+ LRCS +VLDPSITKV+ PTRK D++ LEE N AEKQN+ AATD+ 
Sbjct: 428 MGRQLWGEAMAMGITLRCSSDVLDPSITKVFKPTRKIDNQNLEECNRAEKQNK-AATDKS 487

Query: 481 KAKGKKSKNLS 492
           KA+GKKSKNLS
Sbjct: 488 KARGKKSKNLS 497

[Close]

BLAST of MS024291 vs. ExPASy TrEMBL
Match: A0A6J1E1S0 (pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111429800 PE=4 SV=1)

HSP 1 Score: 823.5 bits (2126), Expect = 4.6e-235
Identity = 411/491 (83.71%), Postives = 441/491 (89.82%), Query Frame = 0


Query: 1   MNARHMFDEIPLRRCVSALKLKWQSFITQSISTDHRFCSLHSTVTNAASVVDLCKVVSRS 60
           MNAR MFDE  LRRCVS LKLKW     QS+ T HRFCSLHSTV N ASV  LC+VVS +
Sbjct: 8   MNARQMFDERSLRRCVSLLKLKWDCLFVQSVCTQHRFCSLHSTVKNGASVSKLCEVVSCT 67

Query: 61  IGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWSLKNLKHDLEDEDFN 120
           IGGLDELE++LNK TVSLTS LVTQVIDSCKNEAP RRLLRFF WSLK L HDLEDEDFN
Sbjct: 68  IGGLDELEATLNKSTVSLTSSLVTQVIDSCKNEAPNRRLLRFFSWSLKKLNHDLEDEDFN 127

Query: 121 HAIRLFAQKKDYNAIDILLSDLKKAGRAMEGETFGLVAEALVKLDREDEALGLFKNLDKY 180
           +AIRLFAQKKDY AIDILLSDLKKA RAM+G+TFGLVAEALVK+DREDEALGLFKNLDKY
Sbjct: 128 YAIRLFAQKKDYTAIDILLSDLKKARRAMDGQTFGLVAEALVKMDREDEALGLFKNLDKY 187

Query: 181 KCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYRSLLYGWYVQKNAKEA 240
           KCP DQFTVTAI+TALCAKGHAKRAEGVVLHH+DKISG+ SCIYRSLLYGW +QKN KEA
Sbjct: 188 KCPHDQFTVTAIITALCAKGHAKRAEGVVLHHKDKISGTMSCIYRSLLYGWSIQKNTKEA 247

Query: 241 RRILKEMKSDGAMPDSFCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYKISPNSIS 300
           RRILKEMKSDG MPD F YNTFLRCL EQNLKKNPSGLVPEALNVMMEMRSY I+PNSIS
Sbjct: 248 RRILKEMKSDGTMPDLFSYNTFLRCLSEQNLKKNPSGLVPEALNVMMEMRSYSIAPNSIS 307

Query: 301 YNILLSCLGRTRRVKESCRILETMKRSGCRADWVSYYLVARVLFLTGRFGKGRRIVDEMI 360
           YNILLSCLGR RRVKESCRILETMKR+GCR D +SYYLVARVLFL+GRFGKG RIV+EMI
Sbjct: 308 YNILLSCLGRARRVKESCRILETMKRTGCRPDCISYYLVARVLFLSGRFGKGCRIVEEMI 367

Query: 361 DEGLIPDRKFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           +EGLIPDRKFYYDLIGILCGVE   YALE+ +KMKRSSLGGYGPVYDVLIPKLCRGGDFE
Sbjct: 368 EEGLIPDRKFYYDLIGILCGVESEKYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGDFE 427

Query: 421 MGRQLWEEAMAMGLKLRCSREVLDPSITKVWLPTRKTDSKILEEVNGAEKQNQAAATDRP 480
           MGRQLWEEAMAMGL LRCS +VLDPSITKV+ PTRK D++ LEE + AEKQN+ AATD+ 
Sbjct: 428 MGRQLWEEAMAMGLTLRCSSDVLDPSITKVFKPTRKIDNQNLEESSRAEKQNK-AATDKS 487

Query: 481 KAKGKKSKNLS 492
           KA+GK+SKNLS
Sbjct: 488 KARGKRSKNLS 497

[Close]

BLAST of MS024291 vs. ExPASy TrEMBL
Match: A0A0A0LPF4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009920 PE=4 SV=1)

HSP 1 Score: 812.0 bits (2096), Expect = 1.4e-231
Identity = 394/488 (80.74%), Postives = 440/488 (90.16%), Query Frame = 0


Query: 1   MNARHMFDEIPLRRCVSALKLKWQSFITQSISTDHRFCSLHSTVTNAASVVDLCKVVSRS 60
           M+ARH+FDE+ LRRCVS LKLKW SFI QS+ T HRFCSLHSTV N A+V  LC+V+S +
Sbjct: 1   MHARHLFDEMSLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 61  IGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWSLKNLKHDLEDEDFN 120
           IGGLDELESSLNKCT+SLTS LVTQVIDS KNEAPTRRLLRFFLWSLK L H LEDEDFN
Sbjct: 61  IGGLDELESSLNKCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 121 HAIRLFAQKKDYNAIDILLSDLKKAGRAMEGETFGLVAEALVKLDREDEALGLFKNLDKY 180
           +AIR FAQKKDY A++ILLS+LKKA RAM+G+TFG VAEA VK+DREDEALGLFKNL+KY
Sbjct: 121 NAIRFFAQKKDYTAVNILLSNLKKADRAMDGQTFGFVAEAFVKMDREDEALGLFKNLEKY 180

Query: 181 KCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYRSLLYGWYVQKNAKEA 240
           KCP DQFTV AI+TALC+KGHAKRAEGVVLHH+DKIS + SCIYRSLLYGW ++KN KEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 241 RRILKEMKSDGAMPDSFCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYKISPNSIS 300
           RRILKEMKSDG MPD FCYNTFL+CLCE+N++KNPSGLVPE+LNVMMEMRSYKISPNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPESLNVMMEMRSYKISPNSIS 300

Query: 301 YNILLSCLGRTRRVKESCRILETMKRSGCRADWVSYYLVARVLFLTGRFGKGRRIVDEMI 360
           YNILLSCL +TRRVKESC+ILE MKR+GC+ D VSYYL+ARVLFLTGRFGKGR IVDEMI
Sbjct: 301 YNILLSCLCKTRRVKESCKILEMMKRTGCQPDCVSYYLMARVLFLTGRFGKGREIVDEMI 360

Query: 361 DEGLIPDRKFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           +EGL PDRKFYYDLIGILCGVER NYALE+ +KMKRSSLGGYGPVYDVLIPKLCRGG+FE
Sbjct: 361 EEGLTPDRKFYYDLIGILCGVERTNYALELFEKMKRSSLGGYGPVYDVLIPKLCRGGEFE 420

Query: 421 MGRQLWEEAMAMGLKLRCSREVLDPSITKVWLPTRKTDSKILEEVNGAEKQNQAAATDRP 480
           MGRQLWEEAMAMG+ L CS E+LDPSITKV+ PTRK ++KI+EE N AEKQN+AAA ++P
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEEFNSAEKQNKAAA-EKP 480

Query: 481 KAKGKKSK 489
           K K KK K
Sbjct: 481 KEKRKKGK 487

[Close]

BLAST of MS024291 vs. ExPASy TrEMBL
Match: A0A5A7US52 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002610 PE=4 SV=1)

HSP 1 Score: 804.7 bits (2077), Expect = 2.2e-229
Identity = 392/486 (80.66%), Postives = 437/486 (89.92%), Query Frame = 0


Query: 1   MNARHMFDEIPLRRCVSALKLKWQSFITQSISTDHRFCSLHSTVTNAASVVDLCKVVSRS 60
           M+ARHMFDE+PLRRCVS LKLKW SFI QS+ T HRFCSLHSTV N A+V  LC+V+S +
Sbjct: 1   MHARHMFDEMPLRRCVSLLKLKWDSFIAQSVCTQHRFCSLHSTVNNGAAVSKLCEVISCT 60

Query: 61  IGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWSLKNLKHDLEDEDFN 120
           IGGLDELESSLN+CT+SLTS LVTQVIDS KNEAPTRRLLRFFLWSLK L H LEDEDFN
Sbjct: 61  IGGLDELESSLNQCTISLTSSLVTQVIDSSKNEAPTRRLLRFFLWSLKKLNHTLEDEDFN 120

Query: 121 HAIRLFAQKKDYNAIDILLSDLKKAGRAMEGETFGLVAEALVKLDREDEALGLFKNLDKY 180
           +AIR FAQKKDY AI+ILLS+LKKA RAM+G+TF  VAEA VK++R+DEALGLFKNL+KY
Sbjct: 121 NAIRFFAQKKDYTAINILLSNLKKADRAMDGQTFSFVAEAFVKMNRDDEALGLFKNLEKY 180

Query: 181 KCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYRSLLYGWYVQKNAKEA 240
           KCP DQFTV AI+TALC+KGHAKRAEGVVLHH+DKIS + SCIYRSLLYGW ++KN KEA
Sbjct: 181 KCPHDQFTVVAIITALCSKGHAKRAEGVVLHHKDKISSTMSCIYRSLLYGWSIKKNTKEA 240

Query: 241 RRILKEMKSDGAMPDSFCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYKISPNSIS 300
           RRILKEMKSDG MPD F YNTFL+CLCE+N++KNPSGLVPEALNVMMEMRSYKI+PNSIS
Sbjct: 241 RRILKEMKSDGTMPDLFSYNTFLKCLCEKNVEKNPSGLVPEALNVMMEMRSYKIAPNSIS 300

Query: 301 YNILLSCLGRTRRVKESCRILETMKRSGCRADWVSYYLVARVLFLTGRFGKGRRIVDEMI 360
           YNILLSCL +TRRVKESCRILE MKRSGCR D VSYYLVARVLFLTGRFGKGR IVDEMI
Sbjct: 301 YNILLSCLCKTRRVKESCRILEMMKRSGCRPDCVSYYLVARVLFLTGRFGKGREIVDEMI 360

Query: 361 DEGLIPDRKFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGPVYDVLIPKLCRGGDFE 420
           +EGL PDRKFYY+LIGILCGVER NYA+E+ +KMKRSSLGGYGPVYDVLIPK+CRGGDFE
Sbjct: 361 EEGLTPDRKFYYELIGILCGVERTNYAVELFEKMKRSSLGGYGPVYDVLIPKVCRGGDFE 420

Query: 421 MGRQLWEEAMAMGLKLRCSREVLDPSITKVWLPTRKTDSKILEEVNGAEKQNQAAATDRP 480
           MGRQLWEEAMAMG+ L CS E+LDPSITKV+ PTRK ++KI+EE N AEKQN+AAA ++P
Sbjct: 421 MGRQLWEEAMAMGVSLNCSSEILDPSITKVFKPTRKIENKIVEECNTAEKQNKAAA-EKP 480

Query: 481 KAKGKK 487
             K KK
Sbjct: 481 NKKRKK 485

[Close]

BLAST of MS024291 vs. TAIR 10
Match: AT5G61370.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 569.3 bits (1466), Expect = 3.0e-162
Identity = 272/482 (56.43%), Postives = 373/482 (77.39%), Query Frame = 0


Query: 17  SALKLKWQSFITQSISTDHRFCSLHSTVTNAASVVDLCKVVSRSIGGLDELESSLNKCTV 76
           + ++L   +++T +      FCS H    +  ++ ++ ++VS  +GGLD+LE +LN+ +V
Sbjct: 4   TTVRLNRFTYLTSTAKLTRYFCSHHLVDRSETALHEVIRIVSSPVGGLDDLEENLNQVSV 63

Query: 77  SLTSPLVTQVIDSCKNEAPTRRLLRFFLWSLKNLKHDLEDEDFNHAIRLFAQKKDYNAID 136
           S +S LVTQVI+SCKNE   RRLLRFF WS K+L   L D++FN+ +R+ A+KKD+ A+ 
Sbjct: 64  SPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQ 123

Query: 137 ILLSDLKKAGRAMEGETFGLVAEALVKLDREDEALGLFKNLDKYKCPQDQFTVTAIVTAL 196
           ILLSDL+K  RAM+ +TF +VAE LVK+ +E++A+G+FK LDK+ CPQD FTVTAI++AL
Sbjct: 124 ILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISAL 183

Query: 197 CAKGHAKRAEGVVLHHRDKISGSKSCIYRSLLYGWYVQKNAKEARRILKEMKSDGAMPDS 256
           C++GH KRA GV+ HH+D ISG++  +YRSLL+GW VQ+N KEARR++++MKS G  PD 
Sbjct: 184 CSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDL 243

Query: 257 FCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEMRSYKISPNSISYNILLSCLGRTRRVKE 316
           FC+N+ L CLCE+N+ +NPSGLVPEALN+M+EMRSYKI P S+SYNILLSCLGRTRRV+E
Sbjct: 244 FCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRE 303

Query: 317 SCRILETMKRSGCRADWVSYYLVARVLFLTGRFGKGRRIVDEMIDEGLIPDRKFYYDLIG 376
           SC+ILE MKRSGC  D  SYY V RVL+LTGRFGKG +IVDEMI+ G  P+RKFYYDLIG
Sbjct: 304 SCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIG 363

Query: 377 ILCGVERVNYALEMLDKMKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLKL 436
           +LCGVERVN+AL++ +KMKRSS+GGYG VYD+LIPKLC+GG+FE GR+LWEEA+++ + L
Sbjct: 364 VLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTL 423

Query: 437 RCSREVLDPSITKVWLPTR-KTDSKILE------EVNGAEKQNQAAATDRPKAKGK-KSK 491
            CS  +LDPS+T+V+ P + K ++ +++      +++    + +     +PK + K K K
Sbjct: 424 SCSISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLKLKPKRRSKTKKK 483

[Close]

BLAST of MS024291 vs. TAIR 10
Match: AT5G60960.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 166.4 bits (420), Expect = 5.8e-41
Identity = 105/377 (27.85%), Postives = 182/377 (48.28%), Query Frame = 0


Query: 97  RRLLRFFLWSLKNLKHDLEDEDFNHAIRLFAQKKDYNAIDILLSDLKKAGRAMEGETFGL 156
           R  L F  W   N      DE  +  +  F ++KD+     +L  + K      G+T   
Sbjct: 124 RAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKG---MLEIISKYKGIAGGKTLES 183

Query: 157 VAEALVKLDREDEALGLFKNLDK-YKCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDK 216
             + LV+  R  +    F+ ++  Y   +D+ ++T +V  LC KGHA  AE +V +  ++
Sbjct: 184 AIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANE 243

Query: 217 ISGSKSCIYRSLLYGWYVQKNAKEARRILKEMKSDGAMPDSFCYNTFLRCLCEQNLKKNP 276
           I   ++ I   L+ GW + +   EA R+  EM   G    +  YN  L C+C+   KK+P
Sbjct: 244 IFPDEN-ICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDP 303

Query: 277 SGLVPEALNVMMEMRSYKISPNSISYNILLSCLGRTRRVKESCRILETMKRSGCRADWVS 336
             L PE   V++EM    +  N+ ++N+L++ L + RR +E+  +   M   GC+ D  +
Sbjct: 304 FKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAET 363

Query: 337 YYLVARVLFLTGRFGKGRRIVDEMIDEGL--IPDRKFYYDLIGILCGVERVNYALEMLDK 396
           Y ++ R L+   R G+G  ++D+M   G   + ++K YY  + ILCG+ER+ +A+ +   
Sbjct: 364 YLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKS 423

Query: 397 MKRSSLGGYGPVYDVLIPKLCRGGDFEMGRQLWEEAMAMGLKLRCSREVLDPSITKVWLP 456
           MK +        YD+L+ K+C          L++EA   G+ +      +DP   K    
Sbjct: 424 MKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRVDPRFMK--KK 483

Query: 457 TRKTDSKILEEVNGAEK 471
           T++ DS + +     EK
Sbjct: 484 TKEVDSNVKKRETLPEK 494

[Close]

BLAST of MS024291 vs. TAIR 10
Match: AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 150.2 bits (378), Expect = 4.3e-36
Identity = 100/390 (25.64%), Postives = 181/390 (46.41%), Query Frame = 0


Query: 47  AASVVDLCKVVSRSIGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWS 106
           A  V  + +++      + +LE +LN+  + L   L+ +V+  C +        RFFLW+
Sbjct: 64  AGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLG--YRFFLWA 123

Query: 107 LKNLKHDLEDEDFNHAIRLFAQKKDYNAIDILLSDLKKAG-RAMEGETFGLVAEALVKLD 166
            K   +    E     + + ++ + + A+  L+ +++K     +E E F ++       +
Sbjct: 124 TKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASAN 183

Query: 167 REDEALGLFKNLDKYKCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYR 226
              +A+ +   + KY    D++    ++ ALC  G  K A  V    R+K   +    + 
Sbjct: 184 MVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLR-YFT 243

Query: 227 SLLYGWYVQKNAKEARRILKEMKSDGAMPDSFCYNTFLRCLCEQNLKKNPSGLVPEALNV 286
           SLLYGW  +    EA+ +L +MK  G  PD   +   L            +G + +A ++
Sbjct: 244 SLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAH-------AGKMADAYDL 303

Query: 287 MMEMRSYKISPNSISYNILLSCLGRT-RRVKESCRILETMKRSGCRADWVSYYLVARVLF 346
           M +MR     PN   Y +L+  L RT +R+ E+ R+   M+R GC AD V+Y  +     
Sbjct: 304 MNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFC 363

Query: 347 LTGRFGKGRRIVDEMIDEGLIPDRKFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGP 406
             G   KG  ++D+M  +G++P +  Y  ++      E+    LE+++KMKR        
Sbjct: 364 KWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLL 423

Query: 407 VYDVLIPKLCRGGDFEMGRQLWEEAMAMGL 435
           +Y+V+I   C+ G+ +   +LW E  A GL
Sbjct: 424 IYNVVIRLACKLGEVKEAVRLWNEMEANGL 443

[Close]

BLAST of MS024291 vs. TAIR 10
Match: AT3G22670.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 112.8 bits (281), Expect = 7.6e-25
Identity = 83/367 (22.62%), Postives = 164/367 (44.69%), Query Frame = 0


Query: 53  LCKVVSRSIGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWSLKNLKH 112
           +C  +++     +++   L+KC V +T  LV QV+    N     +   FF+W+     +
Sbjct: 105 VCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSN--GWNQAYGFFIWANSQTGY 164

Query: 113 DLEDEDFNHAIRLFAQKKDYNAIDILLSDLKK--AGRAMEGETFGLVAEALVKLDREDEA 172
                 +N  + +  + ++++ +  L++++ K    + +  +T   V   L K  + ++A
Sbjct: 165 VHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKA 224

Query: 173 LGLFKNLDK-YKCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYRSLLY 232
           +  F  ++K Y    D   + +++ AL  +   + A  V L   D I    +  +  L++
Sbjct: 225 VDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIK-PDARTFNILIH 284

Query: 233 GWYVQKNAKEARRILKEMKSDGAMPDSFCYNTFLRCLCEQNLKKNPSGLVPEALNVMMEM 292
           G+   +   +AR ++  MK     PD   Y +F+   C++       G       ++ EM
Sbjct: 285 GFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKE-------GDFRRVNEMLEEM 344

Query: 293 RSYKISPNSISYNILLSCLGRTRRVKESCRILETMKRSGCRADWVSYYLVARVLFLTGRF 352
           R    +PN ++Y I++  LG++++V E+  + E MK  GC  D   Y  +  +L  TGRF
Sbjct: 345 RENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRF 404

Query: 353 GKGRRIVDEMIDEGLIPDRKFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGPVYDVL 412
                I ++M ++G+  D   Y  +I       R   AL +L +M+        P  +  
Sbjct: 405 KDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETY 461

Query: 413 IP--KLC 415
            P  K+C
Sbjct: 465 APLLKMC 461

[Close]

BLAST of MS024291 vs. TAIR 10
Match: AT1G52640.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 110.2 bits (274), Expect = 4.9e-24
Identity = 88/381 (23.10%), Postives = 164/381 (43.04%), Query Frame = 0


Query: 50  VVDLCKVVSRSIGGLDELESSLNKCTVSLTSPLVTQVIDSCKNEAPTRRLLRFFLWS--L 109
           V ++ +V+S      D+LE +L   +  ++S LV QV+  CKN        RFFLW+  +
Sbjct: 38  VNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAH--RFFLWARRI 97

Query: 110 KNLKHDLEDEDFNHAIRLFAQKKDYNAI-DILLSDLKKAGRAMEGETFGLVAEALVKLDR 169
            +  H L  E ++  + +    K +  + D L+   +     +  + F +V  A  + + 
Sbjct: 98  PDFAHSL--ESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANL 157

Query: 170 EDEALGLFKNLDKYKCPQDQFTVTAIVTALCAKGHAKRAEGVVLHHRDKISGSKSCIYRS 229
             EA   F  + ++        +  ++ +LC K H   A+      +       +  Y  
Sbjct: 158 PSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSI 217

Query: 230 LLYGWYVQKNAKEARRILKEMKSDGAMPDSFCYNTFLRCLCEQNLKKNPSGLVPEALNVM 289
           L+ GW   ++A  AR++  EM     + D   YN  L  LC+       SG V     + 
Sbjct: 218 LVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCK-------SGDVDGGYKMF 277

Query: 290 MEMRSYKISPNSISYNILLSCLGRTRRVKESCRILETMKRSGCRADWVSYYLVARVLFLT 349
            EM +  + P++ S+ I +        V  + ++L+ MKR     +  ++  + + L   
Sbjct: 278 QEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKN 337

Query: 350 GRFGKGRRIVDEMIDEGLIPDRKFYYDLIGILCGVERVNYALEMLDKMKRSSLGGYGPVY 409
            +      ++DEMI +G  PD   Y  ++   C    VN A ++L +M R+        Y
Sbjct: 338 EKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTY 397

Query: 410 DVLIPKLCRGGDFEMGRQLWE 428
           ++++  L R G F+   ++WE
Sbjct: 398 NMVLKLLIRIGRFDRATEIWE 407

The following BLAST results are available for this feature:

BLAST of MS024291 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134610.1	2.3e-281	98.99	pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Momordica ...	[more]
XP_022987424.1	2.4e-238	84.32	pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita ...	[more]
KAG6589519.1	1.9e-235	83.91	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022921576.1	9.4e-235	83.71	pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita ...	[more]
XP_023516447.1	1.0e-233	83.30	pentatricopeptide repeat-containing protein At5g61370, mitochondrial [Cucurbita ...	[more]

BLAST of MS024291 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLJ6	4.2e-161	56.43	Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidop...	[more]
Q9FME4	8.2e-40	27.85	Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis t...	[more]
P0C8A0	6.1e-35	25.64	Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX...	[more]
Q9LUJ4	1.1e-23	22.62	Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop...	[more]
Q9LFF1	7.0e-23	24.65	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]

BLAST of MS024291 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYQ1	1.1e-281	98.99	pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Momordic...	[more]
A0A6J1JIV3	1.2e-238	84.32	pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbit...	[more]
A0A6J1E1S0	4.6e-235	83.71	pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Cucurbit...	[more]
A0A0A0LPF4	1.4e-231	80.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009920 PE=4 SV=1	[more]
A0A5A7US52	2.2e-229	80.66	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of MS024291 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61370.1	3.0e-162	56.43	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G60960.1	5.8e-41	27.85	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G49730.1	4.3e-36	25.64	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G22670.1	7.6e-25	22.62	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G52640.1	4.9e-24	23.10	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 46..214 e-value: 7.0E-11 score: 44.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 219..489 e-value: 4.0E-34 score: 120.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 224..264 e-value: 3.4E-4 score: 20.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 334..367 e-value: 0.0021 score: 16.1 coord: 299..333 e-value: 9.8E-8 score: 29.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 296..336 e-value: 1.9E-7 score: 31.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 332..366 score: 8.516988
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 297..331 score: 11.366925
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 464..493
None	No IPR available	PANTHER	PTHR47938	RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED	coord: 33..479
None	No IPR available	PANTHER	PTHR47938:SF9	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL	coord: 33..479

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS024291.1	MS024291.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding