MS024281 (gene) Bitter gourd (TR) v1

Overview


Name	MS024281
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Pentatricopeptide repeat-containing protein
Location	scaffold30: 1559122 .. 1561050 (+)
RNA-Seq Expression	MS024281
Synteny	MS024281

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGTTGTCTTCCGCCAATTTCTTCTCCGCCGTTCTCTGAATCCGCAGCATCATATTTCTCTTCCTCGCTTCGCCTCCACCGCTTCACTCCTTCACTCTCCCAAATCTCTGCTTTCCTCCAAATTTCGTCAACATAACTCAACAACTCGCTTCTCAAATGCTCCAATCGAGAGAGAGCCTCTGATTTCTCTCATAAAATCATGCACCCACAAACCACAATTGCTCCAAATCCATGCCCACATTATCCGCACGTCCTCCATCAAAGATCCCATCATTGCCCTCCGCTTCTTGACTCGTGCCGCCACCGCGCCTTTTCGCGAATTGGACTATTCTCGACGATTTTTCTCCCAGCTAACAAACCCATCTGTTTCTCATTACAATGCAATGTTAAGAGCGTATTCTTTGAGCCGCTCACCTCAGGACGGATTGTACGTGTATAGAGATATGGAGAGGCAGGGAATTCGTGCCGATCCATTGTCGTCTTCCTTTGCCATTAAGTCCTGTATAAGGATATTTTCATTACTAAGTGGGGTTCAGATTCACGCGAGGATTTTTAGAAATGGGCATCAGTCGGATAGTCTTTTGCTCACCACTATGATGGACCTGTACTCTCATTGTGGCAAACTTGAGGAAGCATGCAAATTGTTCGACGAAATTCCTCAAAGAGACGTTGTTGCTTGGAACGTTCTGATTTCGTGTCTGACTCGCAATAAACGAACTAGAGATGCTTTGGGTTTATTTGAGATCATGCAGAGTCCAACATATCTCTGCCAACCTGATAAAGTAACTTGTTTGCTTCTCCTCCAAGCGTGTGCAGACTTGAATGCATTGGAATTCGGTGAAAGGATTCATAGTTATATTCAAGAGCGCGGTTATGATACTGAGAGCAATTTGTGTAATTCCCTGATATCTATGTATTCGCGTTGTGGGCGTGTGGATAAGGCATATGAAGTGTTTGACAAAATGCCAGAGAAAAATGTAGTTTCATGGAGTGCAATGATTTCCGGGTTATCAATGAATGGGCACGGGAGAGAAGCTATTGAAGGGTTTTGGGAGATGCAAAAGATGGGTATAGAGCCTGATGATCGTACTTTTACTGGAGTTCTTTCTGCTTGTAGCCACTGTGGTCTGGTCGATGAAGGCATGGCATTCTTTGATCGTATGAGAGAGTTCAAGATAGCTCCTAATGTCCATCACTATGGATGCATGGTTGATCTCTTGGGTCGTGCTGGAATGCTCGACCAAGCCTATCAGCTCGCAATGTCGATGGAGATGAACCCAGATGCGACGTTATGGAGGACCCTTCTTGGAGCTTGTAAAATTCACGGCCATGTAAACCTTGGGGAGCACATAATTGGACATTTGATTGAAGCCAAATCTCAAGAAGCAGGAGATTACGTTCTTTTGCTGAACATTTATTCCTCCGTTGGCAACTGGGACAAGGTAACTGAATTGAGGAAGTTTATGAAGGAGAATGGTATTTATACTACACCTAGCTGCACCACAATAGAACTGAATGGGGTGGTGCATGAGTTTGCTGTGGATGATGTTTCGCATCCGATGAAGGACGAGATTTATGAGCAGCTGGATGACATCAACAAGCAGCTAAAGATTGCTGGCTATGAATCTGAAATATCATCTGAATTGCACAACTTGAAGGCAGAGGAAAAGGGGTATGCACTTTCTTACCATAGCGAGAAACTGGCCATAGCTTTTGGGGTTCTTGCAACTCCGCCGGGAAGAACCATCAGAGTGGCTAATAACATTCGTACTTGTGTAGATTGTCATAACTTCGCAAAGTATGTCTCCAGTGTTTATAACAGAAAAGTGGTTGTTAGAGACCGAAGTCGGTTCCACCATTTCCGAGAGGGTCGGTGTTCCTGCAACGATTACTGGTAGCAGCAGATATGCTCTGGACACCATTGA

mRNA sequence

ATGAAAGTTGTCTTCCGCCAATTTCTTCTCCGCCGTTCTCTGAATCCGCAGCATCATATTTCTCTTCCTCGCTTCGCCTCCACCGCTTCACTCCTTCACTCTCCCAAATCTCTGCTTTCCTCCAAATTTCGTCAACATAACTCAACAACTCGCTTCTCAAATGCTCCAATCGAGAGAGAGCCTCTGATTTCTCTCATAAAATCATGCACCCACAAACCACAATTGCTCCAAATCCATGCCCACATTATCCGCACGTCCTCCATCAAAGATCCCATCATTGCCCTCCGCTTCTTGACTCGTGCCGCCACCGCGCCTTTTCGCGAATTGGACTATTCTCGACGATTTTTCTCCCAGCTAACAAACCCATCTGTTTCTCATTACAATGCAATGTTAAGAGCGTATTCTTTGAGCCGCTCACCTCAGGACGGATTGTACGTGTATAGAGATATGGAGAGGCAGGGAATTCGTGCCGATCCATTGTCGTCTTCCTTTGCCATTAAGTCCTGTATAAGGATATTTTCATTACTAAGTGGGGTTCAGATTCACGCGAGGATTTTTAGAAATGGGCATCAGTCGGATAGTCTTTTGCTCACCACTATGATGGACCTGTACTCTCATTGTGGCAAACTTGAGGAAGCATGCAAATTGTTCGACGAAATTCCTCAAAGAGACGTTGTTGCTTGGAACGTTCTGATTTCGTGTCTGACTCGCAATAAACGAACTAGAGATGCTTTGGGTTTATTTGAGATCATGCAGAGTCCAACATATCTCTGCCAACCTGATAAAGTAACTTGTTTGCTTCTCCTCCAAGCGTGTGCAGACTTGAATGCATTGGAATTCGGTGAAAGGATTCATAGTTATATTCAAGAGCGCGGTTATGATACTGAGAGCAATTTGTGTAATTCCCTGATATCTATGTATTCGCGTTGTGGGCGTGTGGATAAGGCATATGAAGTGTTTGACAAAATGCCAGAGAAAAATGTAGTTTCATGGAGTGCAATGATTTCCGGGTTATCAATGAATGGGCACGGGAGAGAAGCTATTGAAGGGTTTTGGGAGATGCAAAAGATGGGTATAGAGCCTGATGATCGTACTTTTACTGGAGTTCTTTCTGCTTGTAGCCACTGTGGTCTGGTCGATGAAGGCATGGCATTCTTTGATCGTATGAGAGAGTTCAAGATAGCTCCTAATGTCCATCACTATGGATGCATGGTTGATCTCTTGGGTCGTGCTGGAATGCTCGACCAAGCCTATCAGCTCGCAATGTCGATGGAGATGAACCCAGATGCGACGTTATGGAGGACCCTTCTTGGAGCTTGTAAAATTCACGGCCATGTAAACCTTGGGGAGCACATAATTGGACATTTGATTGAAGCCAAATCTCAAGAAGCAGGAGATTACGTTCTTTTGCTGAACATTTATTCCTCCGTTGGCAACTGGGACAAGGTAACTGAATTGAGGAAGTTTATGAAGGAGAATGGTATTTATACTACACCTAGCTGCACCACAATAGAACTGAATGGGGTGGTGCATGAGTTTGCTGTGGATGATGTTTCGCATCCGATGAAGGACGAGATTTATGAGCAGCTGGATGACATCAACAAGCAGCTAAAGATTGCTGGCTATGAATCTGAAATATCATCTGAATTGCACAACTTGAAGGCAGAGGAAAAGGGGTATGCACTTTCTTACCATAGCGAGAAACTGGCCATAGCTTTTGGGGTTCTTGCAACTCCGCCGGGAAGAACCATCAGAGTGGCTAATAACATTCGTACTTGTGTAGATTGTCATAACTTCGCAAAGTATGTCTCCAGTGTTTATAACAGAAAAGTGGTTGTTAGAGACCGAAGTCGGTTCCACCATTTCCGAGAGGGTCGGTGTTCCTGCAACGATTACTGGTAGCAGCAGATATGCTCTGGACACCATTGA

Coding sequence (CDS)

ATGAAAGTTGTCTTCCGCCAATTTCTTCTCCGCCGTTCTCTGAATCCGCAGCATCATATTTCTCTTCCTCGCTTCGCCTCCACCGCTTCACTCCTTCACTCTCCCAAATCTCTGCTTTCCTCCAAATTTCGTCAACATAACTCAACAACTCGCTTCTCAAATGCTCCAATCGAGAGAGAGCCTCTGATTTCTCTCATAAAATCATGCACCCACAAACCACAATTGCTCCAAATCCATGCCCACATTATCCGCACGTCCTCCATCAAAGATCCCATCATTGCCCTCCGCTTCTTGACTCGTGCCGCCACCGCGCCTTTTCGCGAATTGGACTATTCTCGACGATTTTTCTCCCAGCTAACAAACCCATCTGTTTCTCATTACAATGCAATGTTAAGAGCGTATTCTTTGAGCCGCTCACCTCAGGACGGATTGTACGTGTATAGAGATATGGAGAGGCAGGGAATTCGTGCCGATCCATTGTCGTCTTCCTTTGCCATTAAGTCCTGTATAAGGATATTTTCATTACTAAGTGGGGTTCAGATTCACGCGAGGATTTTTAGAAATGGGCATCAGTCGGATAGTCTTTTGCTCACCACTATGATGGACCTGTACTCTCATTGTGGCAAACTTGAGGAAGCATGCAAATTGTTCGACGAAATTCCTCAAAGAGACGTTGTTGCTTGGAACGTTCTGATTTCGTGTCTGACTCGCAATAAACGAACTAGAGATGCTTTGGGTTTATTTGAGATCATGCAGAGTCCAACATATCTCTGCCAACCTGATAAAGTAACTTGTTTGCTTCTCCTCCAAGCGTGTGCAGACTTGAATGCATTGGAATTCGGTGAAAGGATTCATAGTTATATTCAAGAGCGCGGTTATGATACTGAGAGCAATTTGTGTAATTCCCTGATATCTATGTATTCGCGTTGTGGGCGTGTGGATAAGGCATATGAAGTGTTTGACAAAATGCCAGAGAAAAATGTAGTTTCATGGAGTGCAATGATTTCCGGGTTATCAATGAATGGGCACGGGAGAGAAGCTATTGAAGGGTTTTGGGAGATGCAAAAGATGGGTATAGAGCCTGATGATCGTACTTTTACTGGAGTTCTTTCTGCTTGTAGCCACTGTGGTCTGGTCGATGAAGGCATGGCATTCTTTGATCGTATGAGAGAGTTCAAGATAGCTCCTAATGTCCATCACTATGGATGCATGGTTGATCTCTTGGGTCGTGCTGGAATGCTCGACCAAGCCTATCAGCTCGCAATGTCGATGGAGATGAACCCAGATGCGACGTTATGGAGGACCCTTCTTGGAGCTTGTAAAATTCACGGCCATGTAAACCTTGGGGAGCACATAATTGGACATTTGATTGAAGCCAAATCTCAAGAAGCAGGAGATTACGTTCTTTTGCTGAACATTTATTCCTCCGTTGGCAACTGGGACAAGGTAACTGAATTGAGGAAGTTTATGAAGGAGAATGGTATTTATACTACACCTAGCTGCACCACAATAGAACTGAATGGGGTGGTGCATGAGTTTGCTGTGGATGATGTTTCGCATCCGATGAAGGACGAGATTTATGAGCAGCTGGATGACATCAACAAGCAGCTAAAGATTGCTGGCTATGAATCTGAAATATCATCTGAATTGCACAACTTGAAGGCAGAGGAAAAGGGGTATGCACTTTCTTACCATAGCGAGAAACTGGCCATAGCTTTTGGGGTTCTTGCAACTCCGCCGGGAAGAACCATCAGAGTGGCTAATAACATTCGTACTTGTGTAGATTGTCATAACTTCGCAAAGTATGTCTCCAGTGTTTATAACAGAAAAGTGGTTGTTAGAGACCGAAGTCGGTTCCACCATTTCCGAGAGGGTCGGTGTTCCTGCAACGATTACTGGTAGCAGCAGATATGCTCTGGACACCATTGA

Protein sequence

MKVVFRQFLLRRSLNPQHHISLPRFASTASLLHSPKSLLSSKFRQHNSTTRFSNAPIEREPLISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPFRELDYSRRFFSQLTNPSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGIRADPLSSSFAIKSCIRIFSLLSGVQIHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEGFWEMQKMGIEPDDRTFTGVLSACSHCGLVDEGMAFFDRMREFKIAPNVHHYGCMVDLLGRAGMLDQAYQLAMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSSVGNWDKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDDINKQLKIAGYESEISSELHNLKAEEKGYALSYHSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNFAKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYWUQQICSGHH

Homology

[Close]

BLAST of MS024281 vs. NCBI nr
Match: XP_022135228.1 (pentatricopeptide repeat-containing protein At3g47530 [Momordica charantia])

HSP 1 Score: 1279.2 bits (3309), Expect = 0.0e+00
Identity = 627/633 (99.05%), Postives = 630/633 (99.53%), Query Frame = 0


Query: 1   MKVVFRQFLLRRSLNPQHHISLPRFASTASLLHSPKSLLSSKFRQHNSTTRFSNAPIERE 60
           MKVVFRQFLLRRSLNPQHHISLPRFASTASLLHSPKSL+SSKFRQHNSTTRFSNAPIERE
Sbjct: 1   MKVVFRQFLLRRSLNPQHHISLPRFASTASLLHSPKSLISSKFRQHNSTTRFSNAPIERE 60

Query: 61  PLISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPFRELDYSRRFFSQLT 120
           PLISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPFRELDYSRRFFSQLT
Sbjct: 61  PLISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPFRELDYSRRFFSQLT 120

Query: 121 NPSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGIRADPLSSSFAIKSCIRIFSLLSGVQ 180
           NPSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGIRADPLSSSFAIKSCIRIFSLLSGVQ
Sbjct: 121 NPSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGIRADPLSSSFAIKSCIRIFSLLSGVQ 180

Query: 181 IHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTRNKR 240
           IHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTRNKR
Sbjct: 181 IHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTRNKR 240

Query: 241 TRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLC 300
           TRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLC
Sbjct: 241 TRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLC 300

Query: 301 NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEGFWEMQKMGIE 360
           NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSA+ISGLSMNGHGREAIE FWEMQKMGIE
Sbjct: 301 NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAIISGLSMNGHGREAIEAFWEMQKMGIE 360

Query: 361 PDDRTFTGVLSACSHCGLVDEGMAFFDRMREFKIAPNVHHYGCMVDLLGRAGMLDQAYQL 420
           PDDRTFTGVLSACSHCGLVDEGMAFFDRMREFKIAPNVHHYGCMVDLLGRAGMLDQAYQL
Sbjct: 361 PDDRTFTGVLSACSHCGLVDEGMAFFDRMREFKIAPNVHHYGCMVDLLGRAGMLDQAYQL 420

Query: 421 AMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSSVGNW 480
           AMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSS GNW
Sbjct: 421 AMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSSAGNW 480

Query: 481 DKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDDINKQLKIA 540
           DKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLD+INKQLKIA
Sbjct: 481 DKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDEINKQLKIA 540

Query: 541 GYESEISSELHNLKAEEKGYALSYHSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNFA 600
           GYESEISSELHNLKAEEKGYALS HSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNFA
Sbjct: 541 GYESEISSELHNLKAEEKGYALSCHSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNFA 600

Query: 601 KYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 634
           KYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW
Sbjct: 601 KYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 633

[Close]

BLAST of MS024281 vs. NCBI nr
Match: KAG6589508.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023195.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1127.1 bits (2914), Expect = 0.0e+00
Identity = 549/634 (86.59%), Postives = 585/634 (92.27%), Query Frame = 0


Query: 1   MKVVFRQFLLRRSLNPQHHISLPRFASTASLLHSPKSLLSSKFRQHNSTTRFSNAPIERE 60
           M V+FR+       +  H + LPRFASTASLLHSP SLLSSKFR+ NST RF     +RE
Sbjct: 1   MTVIFRRCRCSADRH-LHSLRLPRFASTASLLHSPISLLSSKFREQNSTLRF-----DRE 60

Query: 61  PLISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPFRELDYSRRFFSQLT 120
           PLISLIKSCTHK QLLQIHAH+IRTS I+DPI++LRFLTR  +APFREL YSRRFFSQLT
Sbjct: 61  PLISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLT 120

Query: 121 NPSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGIRADPLSSSFAIKSCIRIFSLLSGVQ 180
           NP VSHYN +LRAYSLSRSP +GLY+YRDMER+G+ ADPLSSSFA+KSCIR+ SL SGVQ
Sbjct: 121 NPFVSHYNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQ 180

Query: 181 IHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTRNKR 240
           IHARIFRNGHQSDSLLLT+MMDLYSHCGKLE+ACKLFDEIPQRDVVAWNVLISCLTRNKR
Sbjct: 181 IHARIFRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKR 240

Query: 241 TRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLC 300
           TRDALGLFEIMQSPTYLC+PDKVTCLLLLQACADLNALEFGERIHS+IQ+ GY+TESNLC
Sbjct: 241 TRDALGLFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLC 300

Query: 301 NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEGFWEMQKMGIE 360
           NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIE FW MQK G+E
Sbjct: 301 NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVE 360

Query: 361 PDDRTFTGVLSACSHCGLVDEGMAFFDRMR-EFKIAPNVHHYGCMVDLLGRAGMLDQAYQ 420
           PDD TFT VLSACSHCGLVDEGMAFFDRMR EF I P VHHYGCMVDLLGRAGMLDQAYQ
Sbjct: 361 PDDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQ 420

Query: 421 LAMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSSVGN 480
           L MSME+NPDAT+WRTLLGAC+IHGH NLGE II HLIE KSQEAGDYVLLLNIYSS GN
Sbjct: 421 LVMSMEVNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGN 480

Query: 481 WDKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDDINKQLKI 540
           WDKVTELRKFMKE GIYTTP CTTIELNGVVHEFAVDD+SHPMKD+IYEQLD+INKQLKI
Sbjct: 481 WDKVTELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKI 540

Query: 541 AGYESEISSELHNLKAEEKGYALSYHSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNF 600
           AGYE+EISSELHNLKAE+KGYALSYHSEKLAIAFG+LATPPGRTIRVANN+RTC+DCHNF
Sbjct: 541 AGYEAEISSELHNLKAEDKGYALSYHSEKLAIAFGILATPPGRTIRVANNLRTCMDCHNF 600

Query: 601 AKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 634
           AKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW
Sbjct: 601 AKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 628

[Close]

BLAST of MS024281 vs. NCBI nr
Match: XP_023515406.1 (pentatricopeptide repeat-containing protein At3g47530 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1124.8 bits (2908), Expect = 0.0e+00
Identity = 548/634 (86.44%), Postives = 584/634 (92.11%), Query Frame = 0


Query: 1   MKVVFRQFLLRRSLNPQHHISLPRFASTASLLHSPKSLLSSKFRQHNSTTRFSNAPIERE 60
           M V+FR+       +  H + LPRFASTASLLHSP SLLSSKFR+ NST RF     +RE
Sbjct: 1   MTVIFRRCRCSADRH-LHSLRLPRFASTASLLHSPISLLSSKFREQNSTLRF-----DRE 60

Query: 61  PLISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPFRELDYSRRFFSQLT 120
           PLISLIKSCTHK QLLQIHAH+IRTS I+DPI++LRFLTR  +APFREL YSRRFFSQLT
Sbjct: 61  PLISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLT 120

Query: 121 NPSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGIRADPLSSSFAIKSCIRIFSLLSGVQ 180
           NP VSHYN +LRAYSLSRSP +GLY+YRDMERQG+ ADPLSSSFA+KSCIR+ SL SG+Q
Sbjct: 121 NPFVSHYNTLLRAYSLSRSPLEGLYMYRDMERQGVHADPLSSSFAVKSCIRMLSLFSGIQ 180

Query: 181 IHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTRNKR 240
           IHARIFRNGHQSDSLLLT+MMDLYSHCGKLE+ACKLFDEIPQRDVVAWNVLISCLTRNKR
Sbjct: 181 IHARIFRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKR 240

Query: 241 TRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLC 300
           TRDALGLFEIMQSPTYLC+PDKVTCLLLLQACADLNALEFGERIHSYIQ+  Y+TESNLC
Sbjct: 241 TRDALGLFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSYIQQNDYNTESNLC 300

Query: 301 NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEGFWEMQKMGIE 360
           NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIE FW MQK G+E
Sbjct: 301 NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVE 360

Query: 361 PDDRTFTGVLSACSHCGLVDEGMAFFDRMR-EFKIAPNVHHYGCMVDLLGRAGMLDQAYQ 420
           PDD TFT VLSACSHCGLVDEGMAFFDRMR EF I P VHHYGCMVDLLGRAGMLDQAYQ
Sbjct: 361 PDDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQ 420

Query: 421 LAMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSSVGN 480
           L MSME+NPDAT+WRTLLGAC+IHGH NLGE II HLIE KSQEAGDYVLLLNIYSS GN
Sbjct: 421 LVMSMEVNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGN 480

Query: 481 WDKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDDINKQLKI 540
           WDKVTELRKFMKE GIYTTP CTTIELNGVVHEFAVDD+SHPMKD+IY+QLD+IN+QLKI
Sbjct: 481 WDKVTELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINQQLKI 540

Query: 541 AGYESEISSELHNLKAEEKGYALSYHSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNF 600
           AGYE+EISSELHNLKAE+KGYALSYHSEKLAIAFGVLATPPGRTIRVANN+RTC+DCHNF
Sbjct: 541 AGYEAEISSELHNLKAEDKGYALSYHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNF 600

Query: 601 AKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 634
           AKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW
Sbjct: 601 AKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 628

[Close]

BLAST of MS024281 vs. NCBI nr
Match: XP_022921651.1 (pentatricopeptide repeat-containing protein At3g47530 [Cucurbita moschata])

HSP 1 Score: 1120.5 bits (2897), Expect = 0.0e+00
Identity = 547/634 (86.28%), Postives = 583/634 (91.96%), Query Frame = 0


Query: 1   MKVVFRQFLLRRSLNPQHHISLPRFASTASLLHSPKSLLSSKFRQHNSTTRFSNAPIERE 60
           M V+FR+       +  H + LP FASTASLLHSP SLLSSKFR+ NST RF     +RE
Sbjct: 1   MTVIFRRCRCSADRH-LHSLRLPHFASTASLLHSPISLLSSKFREQNSTLRF-----DRE 60

Query: 61  PLISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPFRELDYSRRFFSQLT 120
           PLISLIKSCTHK QLLQIHAH+IRTS I+DPI++LRFLTR  +APFREL YSRRFFSQLT
Sbjct: 61  PLISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLT 120

Query: 121 NPSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGIRADPLSSSFAIKSCIRIFSLLSGVQ 180
           NP VSHYN +LRAYSLSRSP +GLY+YRDMER+G+ ADPLSSSFA+KSCIR+ SL SGVQ
Sbjct: 121 NPFVSHYNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQ 180

Query: 181 IHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTRNKR 240
           IHARIFRNGHQSDSLLLT+MMDLYSHCGKLE+ACKLFDEIPQRDVVAWNVLISCLTRNKR
Sbjct: 181 IHARIFRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKR 240

Query: 241 TRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLC 300
           TRDALGLFEIMQSPTYLC+PDKVTCLLLLQACADLNALEFGERIHS+IQ+ GY+TESNLC
Sbjct: 241 TRDALGLFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLC 300

Query: 301 NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEGFWEMQKMGIE 360
           NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIE FW MQK G+E
Sbjct: 301 NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVE 360

Query: 361 PDDRTFTGVLSACSHCGLVDEGMAFFDRMR-EFKIAPNVHHYGCMVDLLGRAGMLDQAYQ 420
           PDD TFT VLSACSHCGLVDEGMAFFDRMR EF I P VHHYGCMVDLLGRAGMLDQAYQ
Sbjct: 361 PDDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQ 420

Query: 421 LAMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSSVGN 480
           L MSME+NPDAT+WRTLLGAC+IHGH NLGE II HLIE KSQEAGDYVLLLNIYSS GN
Sbjct: 421 LVMSMEVNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGN 480

Query: 481 WDKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDDINKQLKI 540
           W KVTELRKFMKE GIYTTP CTTIELNGVVHEFAVDD+SHPMKD+IYEQLD+INKQLKI
Sbjct: 481 WVKVTELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKI 540

Query: 541 AGYESEISSELHNLKAEEKGYALSYHSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNF 600
           AGYE+EISSELHNLKAE+KGYALS+HSEKLAIAFGVLATPPGRTIRVANN+RTC+DCHNF
Sbjct: 541 AGYEAEISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNF 600

Query: 601 AKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 634
           AKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW
Sbjct: 601 AKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 628

[Close]

BLAST of MS024281 vs. NCBI nr
Match: XP_022987181.1 (pentatricopeptide repeat-containing protein At3g47530 [Cucurbita maxima])

HSP 1 Score: 1119.0 bits (2893), Expect = 0.0e+00
Identity = 543/634 (85.65%), Postives = 584/634 (92.11%), Query Frame = 0


Query: 1   MKVVFRQFLLRRSLNPQHHISLPRFASTASLLHSPKSLLSSKFRQHNSTTRFSNAPIERE 60
           M V+FR+       +P H + LPRFASTASLLHSP SLLSSKFRQ NST  F     +RE
Sbjct: 1   MTVIFRRCRCSAYRHP-HSLRLPRFASTASLLHSPISLLSSKFRQQNSTLHF-----DRE 60

Query: 61  PLISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPFRELDYSRRFFSQLT 120
           PLISLIKSCTHK QLLQIHAH+IRTS I+DPI++LRFLTR  +APFREL YSRRFFSQLT
Sbjct: 61  PLISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLT 120

Query: 121 NPSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGIRADPLSSSFAIKSCIRIFSLLSGVQ 180
           NP VSHYN +LRAYSLSRSP +GLY+YRDMERQG+ ADPLSSSFA+KSCIR+ SL SG+Q
Sbjct: 121 NPFVSHYNTLLRAYSLSRSPLEGLYMYRDMERQGVHADPLSSSFALKSCIRMLSLFSGIQ 180

Query: 181 IHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTRNKR 240
           IHARIFRNGHQSDSLLLT+MMDLYSHCGKL++ACKLFDEIPQRDVVAWNVLISCLTRNKR
Sbjct: 181 IHARIFRNGHQSDSLLLTSMMDLYSHCGKLKDACKLFDEIPQRDVVAWNVLISCLTRNKR 240

Query: 241 TRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLC 300
           TRDALGLFEIMQSPTYLC+PDKVTCLLLLQACADLNALEFGERIHS+IQ+ GY+TESNLC
Sbjct: 241 TRDALGLFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLC 300

Query: 301 NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEGFWEMQKMGIE 360
           NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIE FW MQK G+E
Sbjct: 301 NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVE 360

Query: 361 PDDRTFTGVLSACSHCGLVDEGMAFFDRMR-EFKIAPNVHHYGCMVDLLGRAGMLDQAYQ 420
           PDD TFT VLSACSHCGLVDEGMAFFDRMR EF I P VHHYGCMVDLLGRAGMLDQAYQ
Sbjct: 361 PDDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQ 420

Query: 421 LAMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSSVGN 480
           L MSME+NPDAT+WRTLLGAC+IHGH NLGE +I HL+E KSQEAGDYVLLLNIYSS GN
Sbjct: 421 LVMSMEVNPDATMWRTLLGACRIHGHANLGERVIEHLVELKSQEAGDYVLLLNIYSSAGN 480

Query: 481 WDKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDDINKQLKI 540
           WDKVTELRKFMKE GIYTTP CTTIELNGVVHEFAVDD+SHPMKD+IY+QLD+IN+QLKI
Sbjct: 481 WDKVTELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINQQLKI 540

Query: 541 AGYESEISSELHNLKAEEKGYALSYHSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNF 600
           AGYE+EISSELHNLKAE+KGYALS+HSEKLAIAFGVLATPPG TIRVANN+RTC+DCHNF
Sbjct: 541 AGYEAEISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGGTIRVANNLRTCLDCHNF 600

Query: 601 AKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 634
           AKYVSSVYNRKVVVRDRS+FHHFREGRCSCNDYW
Sbjct: 601 AKYVSSVYNRKVVVRDRSQFHHFREGRCSCNDYW 628

[Close]

BLAST of MS024281 vs. ExPASy Swiss-Prot
Match: Q9SN85 (Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H76 PE=2 SV=1)

HSP 1 Score: 748.4 bits (1931), Expect = 6.6e-215
Identity = 367/578 (63.49%), Postives = 454/578 (78.55%), Query Frame = 0


Query: 62  LISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPF-RELDYSRRFFSQLT 121
           L+SLI S T K  L QIHA ++RTS I++  +   FL+R A +   R+++YS R FSQ  
Sbjct: 14  LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL 73

Query: 122 NPSVSHYNAMLRAYSLSRSPQDGLYVYRDMER-QGIRADPLSSSFAIKSCIRIFSLLSGV 181
           NP++SH N M+RA+SLS++P +G  ++R + R   + A+PLSSSFA+K CI+   LL G+
Sbjct: 74  NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133

Query: 182 QIHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTRNK 241
           QIH +IF +G  SDSLL+TT+MDLYS C    +ACK+FDEIP+RD V+WNVL SC  RNK
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193

Query: 242 RTRDALGLFEIMQSPTYLC-QPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESN 301
           RTRD L LF+ M++    C +PD VTCLL LQACA+L AL+FG+++H +I E G     N
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253

Query: 302 LCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEGFWEMQKMG 361
           L N+L+SMYSRCG +DKAY+VF  M E+NVVSW+A+ISGL+MNG G+EAIE F EM K G
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313

Query: 362 IEPDDRTFTGVLSACSHCGLVDEGMAFFDRMR--EFKIAPNVHHYGCMVDLLGRAGMLDQ 421
           I P+++T TG+LSACSH GLV EGM FFDRMR  EFKI PN+HHYGC+VDLLGRA +LD+
Sbjct: 314 ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDK 373

Query: 422 AYQLAMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSS 481
           AY L  SMEM PD+T+WRTLLGAC++HG V LGE +I HLIE K++EAGDYVLLLN YS+
Sbjct: 374 AYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYST 433

Query: 482 VGNWDKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDDINKQ 541
           VG W+KVTELR  MKE  I+T P C+ IEL G VHEF VDDVSHP K+EIY+ L +IN+Q
Sbjct: 434 VGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQ 493

Query: 542 LKIAGYESEISSELHNLKA-EEKGYALSYHSEKLAIAFGVLATPPGRTIRVANNIRTCVD 601
           LKIAGY +EI+SELHNL++ EEKGYAL YHSEKLAIAFG+L TPPG TIRV  N+RTCVD
Sbjct: 494 LKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVD 553

Query: 602 CHNFAKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 634
           CHNFAK+VS VY+R V+VRDRSRFHHF+ G CSCND+W
Sbjct: 554 CHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591

[Close]

BLAST of MS024281 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 9.7e-126
Identity = 215/529 (40.64%), Postives = 338/529 (63.89%), Query Frame = 0


Query: 109 LDYSRRFFSQLTNPSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGIRADPLSSSFAIKS 168
           ++ +++ F ++    V  +NAM+  Y+ + + ++ L +++DM +  +R D  +    + +
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275

Query: 169 CIRIFSLLSGVQIHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAW 228
           C +  S+  G Q+H  I  +G  S+  ++  ++DLYS CG+LE AC LF+ +P +DV++W
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335

Query: 229 NVLISCLTRNKRTRDALGLF-EIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSY 288
           N LI   T     ++AL LF E+++S      P+ VT L +L ACA L A++ G  IH Y
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGE---TPNDVTMLSILPACAHLGAIDIGRWIHVY 395

Query: 289 IQER--GYDTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGR 348
           I +R  G    S+L  SLI MY++CG ++ A++VF+ +  K++ SW+AMI G +M+G   
Sbjct: 396 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 455

Query: 349 EAIEGFWEMQKMGIEPDDRTFTGVLSACSHCGLVDEGMAFFDRM-REFKIAPNVHHYGCM 408
            + + F  M+K+GI+PDD TF G+LSACSH G++D G   F  M +++K+ P + HYGCM
Sbjct: 456 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCM 515

Query: 409 VDLLGRAGMLDQAYQLAMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEA 468
           +DLLG +G+  +A ++   MEM PD  +W +LL ACK+HG+V LGE    +LI+ + +  
Sbjct: 516 IDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENP 575

Query: 469 GDYVLLLNIYSSVGNWDKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKD 528
           G YVLL NIY+S G W++V + R  + + G+   P C++IE++ VVHEF + D  HP   
Sbjct: 576 GSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNR 635

Query: 529 EIYEQLDDINKQLKIAGYESEISSELHNLKAEEKGYALSYHSEKLAIAFGVLATPPGRTI 588
           EIY  L+++   L+ AG+  + S  L  ++ E K  AL +HSEKLAIAFG+++T PG  +
Sbjct: 636 EIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKL 695

Query: 589 RVANNIRTCVDCHNFAKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 634
            +  N+R C +CH   K +S +Y R+++ RDR+RFHHFR+G CSCNDYW
Sbjct: 696 TIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

[Close]

BLAST of MS024281 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 449.1 bits (1154), Expect = 8.2e-125
Identity = 232/566 (40.99%), Postives = 347/566 (61.31%), Query Frame = 0


Query: 74  QLLQIHAHIIRTS-SIKDPIIALRFLTRAATAPF-RELDYSRRFFSQLTNP-SVSHYNAM 133
           +L QIHA  IR   SI D  +    +    + P    + Y+ + FS++  P +V  +N +
Sbjct: 32  KLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTL 91

Query: 134 LRAYSLSRSPQDGLYVYRDMERQG-IRADPLSSSFAIKSCIRIFSLLSGVQIHARIFRNG 193
           +R Y+   +      +YR+M   G +  D  +  F IK+   +  +  G  IH+ + R+G
Sbjct: 92  IRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSG 151

Query: 194 HQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALGLFE 253
             S   +  +++ LY++CG +  A K+FD++P++D+VAWN +I+    N +  +AL L+ 
Sbjct: 152 FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYT 211

Query: 254 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLCNSLISMYSR 313
            M S     +PD  T + LL ACA + AL  G+R+H Y+ + G     +  N L+ +Y+R
Sbjct: 212 EMNSKG--IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYAR 271

Query: 314 CGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEGFWEMQKM-GIEPDDRTFTG 373
           CGRV++A  +FD+M +KN VSW+++I GL++NG G+EAIE F  M+   G+ P + TF G
Sbjct: 272 CGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVG 331

Query: 374 VLSACSHCGLVDEGMAFFDRMR-EFKIAPNVHHYGCMVDLLGRAGMLDQAYQLAMSMEMN 433
           +L ACSHCG+V EG  +F RMR E+KI P + H+GCMVDLL RAG + +AY+   SM M 
Sbjct: 332 ILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ 391

Query: 434 PDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSSVGNWDKVTELR 493
           P+  +WRTLLGAC +HG  +L E     +++ +   +GDYVLL N+Y+S   W  V ++R
Sbjct: 392 PNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIR 451

Query: 494 KFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDDINKQLKIAGYESEIS 553
           K M  +G+   P  + +E+   VHEF + D SHP  D IY +L ++  +L+  GY  +IS
Sbjct: 452 KQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQIS 511

Query: 554 SELHNLKAEEKGYALSYHSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNFAKYVSSVY 613
           +   +++ EEK  A+ YHSEK+AIAF +++TP    I V  N+R C DCH   K VS VY
Sbjct: 512 NVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVY 571

Query: 614 NRKVVVRDRSRFHHFREGRCSCNDYW 634
           NR++VVRDRSRFHHF+ G CSC DYW
Sbjct: 572 NREIVVRDRSRFHHFKNGSCSCQDYW 595

[Close]

BLAST of MS024281 vs. ExPASy Swiss-Prot
Match: B8YEK4 (Pentatricopeptide repeat-containing protein OGR1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=OGR1 PE=2 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 7.7e-123
Identity = 246/584 (42.12%), Postives = 336/584 (57.53%), Query Frame = 0


Query: 60  EPLISLIKSCTHKPQLLQIHAHIIRTSSI-KDPIIALRFLTRAATAPF-RELDYSRRFFS 119
           E L+  + S  H    LQ HA ++ +  +   P +  RFL R A +P    L ++     
Sbjct: 11  ESLLPRLASLRH---YLQFHARLLTSGHLGAHPGLRARFLDRLALSPHPAALPHALLLLR 70

Query: 120 QLTNPSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGI--RADPLSSSFAIKSCIRIFSL 179
            L  P+ +  NA LR  + S  P   L +        +  R D LS SFA+K+  R    
Sbjct: 71  SLPTPATNDLNAALRGLAASPHPARSLLLLAGRLLPALLPRPDALSLSFALKASARCSDA 130

Query: 180 LSGVQIHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCL 239
            + VQ+HA + R G  +D  LLTT++D Y+ CG L  A K+FDE+  RDV  WN L++ L
Sbjct: 131 HTTVQLHALVLRLGVAADVRLLTTLLDSYAKCGDLASARKVFDEMTVRDVATWNSLLAGL 190

Query: 240 TRNKRTRDALGLFEIM----QSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQER 299
            +      AL LF  +    Q      +P++VT +  L ACA +  L+ G  +H + +  
Sbjct: 191 AQGTEPNLALALFHRLANSFQELPSREEPNEVTIVAALSACAQIGLLKDGMYVHEFAKRF 250

Query: 300 GYDTESNLCNSLISMYSRCGRVDKAYEVFD--KMPEKNVVSWSAMISGLSMNGHGREAIE 359
           G D    +CNSLI MYS+CG + +A +VF   K  ++ +VS++A I   SM+GHG +A+ 
Sbjct: 251 GLDRNVRVCNSLIDMYSKCGSLSRALDVFHSIKPEDQTLVSYNAAIQAHSMHGHGGDALR 310

Query: 360 GFWEMQKMGIEPDDRTFTGVLSACSHCGLVDEGMAFFDRMREFKIAPNVHHYGCMVDLLG 419
            F EM    IEPD  T+  VL  C+H GLVD+G+  F+ MR   +APN+ HYG +VDLLG
Sbjct: 311 LFDEMPTR-IEPDGVTYLAVLCGCNHSGLVDDGLRVFNSMR---VAPNMKHYGTIVDLLG 370

Query: 420 RAGMLDQAYQLAMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVL 479
           RAG L +AY   +SM    D  LW+TLLGA K+HG V L E     L E  S   GDYVL
Sbjct: 371 RAGRLTEAYDTVISMPFPADIVLWQTLLGAAKMHGVVELAELAANKLAELGSNVDGDYVL 430

Query: 480 LLNIYSSVGNWDKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQ 539
           L N+Y+S   W  V  +R  M+ N +   P  +  E++GV+H+F   D  HP   EIY  
Sbjct: 431 LSNVYASKARWMDVGRVRDTMRSNDVRKVPGFSYTEIDGVMHKFINGDKEHPRWQEIYRA 490

Query: 540 LDDINKQLKIAGYESEISSELHNLKAEEKGYALSYHSEKLAIAFGVLATPPGRTIRVANN 599
           L+DI  ++   GYE E S+ LH++  EEK YAL YHSEKLAIAFG++ATPPG T+RV  N
Sbjct: 491 LEDIVSRISELGYEPETSNVLHDIGEEEKQYALCYHSEKLAIAFGLIATPPGETLRVIKN 550

Query: 600 IRTCVDCHNFAKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 634
           +R C DCH  AK +S  Y R +V+RDR+RFH F +G+CSC DYW
Sbjct: 551 LRICGDCHVVAKLISKAYGRVIVIRDRARFHRFEDGQCSCRDYW 587

[Close]

BLAST of MS024281 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.0e-122
Identity = 225/623 (36.12%), Postives = 361/623 (57.95%), Query Frame = 0


Query: 62  LISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPF--RELDYSRRFFSQL 121
           L   I +C     L QIHA  I++  ++D + A   L   AT+    R+LDY+ + F+Q+
Sbjct: 26  LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85

Query: 122 TNPSVSHYNAMLRAYSLSRSPQDGLYV---YRDMERQGIRADPLSSSFAIKSCIRIFSLL 181
              +   +N ++R +S S   +  + +   Y  M  + +  +  +    +K+C +   + 
Sbjct: 86  PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145

Query: 182 SGVQIHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEA----------------------- 241
            G QIH    + G   D  +++ ++ +Y  CG +++A                       
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205

Query: 242 ------------------CK----LFDEIPQRDVVAWNVLISCLTRNKRTRDALGLFEIM 301
                             CK    LFD++ QR VV+WN +IS  + N   +DA+ +F  M
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265

Query: 302 QSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLCNSLISMYSRCG 361
           +      +P+ VT + +L A + L +LE GE +H Y ++ G   +  L ++LI MYS+CG
Sbjct: 266 KKGD--IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 325

Query: 362 RVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEGFWEMQKMGIEPDDRTFTGVLS 421
            ++KA  VF+++P +NV++WSAMI+G +++G   +AI+ F +M++ G+ P D  +  +L+
Sbjct: 326 IIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 385

Query: 422 ACSHCGLVDEGMAFFDRMREFK-IAPNVHHYGCMVDLLGRAGMLDQAYQLAMSMEMNPDA 481
           ACSH GLV+EG  +F +M     + P + HYGCMVDLLGR+G+LD+A +  ++M + PD 
Sbjct: 386 ACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDD 445

Query: 482 TLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSSVGNWDKVTELRKFM 541
            +W+ LLGAC++ G+V +G+ +   L++    ++G YV L N+Y+S GNW +V+E+R  M
Sbjct: 446 VIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRM 505

Query: 542 KENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDDINKQLKIAGYESEISSEL 601
           KE  I   P C+ I+++GV+HEF V+D SHP   EI   L +I+ +L++AGY    +  L
Sbjct: 506 KEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVL 565

Query: 602 HNLKAEEKGYALSYHSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNFAKYVSSVYNRK 634
            NL+ E+K   L YHSEK+A AFG+++T PG+ IR+  N+R C DCH+  K +S VY RK
Sbjct: 566 LNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRK 625

[Close]

BLAST of MS024281 vs. ExPASy TrEMBL
Match: A0A6J1C487 (pentatricopeptide repeat-containing protein At3g47530 OS=Momordica charantia OX=3673 GN=LOC111007242 PE=3 SV=1)

HSP 1 Score: 1279.2 bits (3309), Expect = 0.0e+00
Identity = 627/633 (99.05%), Postives = 630/633 (99.53%), Query Frame = 0


Query: 1   MKVVFRQFLLRRSLNPQHHISLPRFASTASLLHSPKSLLSSKFRQHNSTTRFSNAPIERE 60
           MKVVFRQFLLRRSLNPQHHISLPRFASTASLLHSPKSL+SSKFRQHNSTTRFSNAPIERE
Sbjct: 1   MKVVFRQFLLRRSLNPQHHISLPRFASTASLLHSPKSLISSKFRQHNSTTRFSNAPIERE 60

Query: 61  PLISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPFRELDYSRRFFSQLT 120
           PLISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPFRELDYSRRFFSQLT
Sbjct: 61  PLISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPFRELDYSRRFFSQLT 120

Query: 121 NPSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGIRADPLSSSFAIKSCIRIFSLLSGVQ 180
           NPSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGIRADPLSSSFAIKSCIRIFSLLSGVQ
Sbjct: 121 NPSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGIRADPLSSSFAIKSCIRIFSLLSGVQ 180

Query: 181 IHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTRNKR 240
           IHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTRNKR
Sbjct: 181 IHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTRNKR 240

Query: 241 TRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLC 300
           TRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLC
Sbjct: 241 TRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLC 300

Query: 301 NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEGFWEMQKMGIE 360
           NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSA+ISGLSMNGHGREAIE FWEMQKMGIE
Sbjct: 301 NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAIISGLSMNGHGREAIEAFWEMQKMGIE 360

Query: 361 PDDRTFTGVLSACSHCGLVDEGMAFFDRMREFKIAPNVHHYGCMVDLLGRAGMLDQAYQL 420
           PDDRTFTGVLSACSHCGLVDEGMAFFDRMREFKIAPNVHHYGCMVDLLGRAGMLDQAYQL
Sbjct: 361 PDDRTFTGVLSACSHCGLVDEGMAFFDRMREFKIAPNVHHYGCMVDLLGRAGMLDQAYQL 420

Query: 421 AMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSSVGNW 480
           AMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSS GNW
Sbjct: 421 AMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSSAGNW 480

Query: 481 DKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDDINKQLKIA 540
           DKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLD+INKQLKIA
Sbjct: 481 DKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDEINKQLKIA 540

Query: 541 GYESEISSELHNLKAEEKGYALSYHSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNFA 600
           GYESEISSELHNLKAEEKGYALS HSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNFA
Sbjct: 541 GYESEISSELHNLKAEEKGYALSCHSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNFA 600

Query: 601 KYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 634
           KYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW
Sbjct: 601 KYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 633

[Close]

BLAST of MS024281 vs. ExPASy TrEMBL
Match: A0A6J1E1Z3 (pentatricopeptide repeat-containing protein At3g47530 OS=Cucurbita moschata OX=3662 GN=LOC111429841 PE=3 SV=1)

HSP 1 Score: 1120.5 bits (2897), Expect = 0.0e+00
Identity = 547/634 (86.28%), Postives = 583/634 (91.96%), Query Frame = 0


Query: 1   MKVVFRQFLLRRSLNPQHHISLPRFASTASLLHSPKSLLSSKFRQHNSTTRFSNAPIERE 60
           M V+FR+       +  H + LP FASTASLLHSP SLLSSKFR+ NST RF     +RE
Sbjct: 1   MTVIFRRCRCSADRH-LHSLRLPHFASTASLLHSPISLLSSKFREQNSTLRF-----DRE 60

Query: 61  PLISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPFRELDYSRRFFSQLT 120
           PLISLIKSCTHK QLLQIHAH+IRTS I+DPI++LRFLTR  +APFREL YSRRFFSQLT
Sbjct: 61  PLISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLT 120

Query: 121 NPSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGIRADPLSSSFAIKSCIRIFSLLSGVQ 180
           NP VSHYN +LRAYSLSRSP +GLY+YRDMER+G+ ADPLSSSFA+KSCIR+ SL SGVQ
Sbjct: 121 NPFVSHYNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQ 180

Query: 181 IHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTRNKR 240
           IHARIFRNGHQSDSLLLT+MMDLYSHCGKLE+ACKLFDEIPQRDVVAWNVLISCLTRNKR
Sbjct: 181 IHARIFRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKR 240

Query: 241 TRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLC 300
           TRDALGLFEIMQSPTYLC+PDKVTCLLLLQACADLNALEFGERIHS+IQ+ GY+TESNLC
Sbjct: 241 TRDALGLFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLC 300

Query: 301 NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEGFWEMQKMGIE 360
           NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIE FW MQK G+E
Sbjct: 301 NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVE 360

Query: 361 PDDRTFTGVLSACSHCGLVDEGMAFFDRMR-EFKIAPNVHHYGCMVDLLGRAGMLDQAYQ 420
           PDD TFT VLSACSHCGLVDEGMAFFDRMR EF I P VHHYGCMVDLLGRAGMLDQAYQ
Sbjct: 361 PDDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQ 420

Query: 421 LAMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSSVGN 480
           L MSME+NPDAT+WRTLLGAC+IHGH NLGE II HLIE KSQEAGDYVLLLNIYSS GN
Sbjct: 421 LVMSMEVNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGN 480

Query: 481 WDKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDDINKQLKI 540
           W KVTELRKFMKE GIYTTP CTTIELNGVVHEFAVDD+SHPMKD+IYEQLD+INKQLKI
Sbjct: 481 WVKVTELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKI 540

Query: 541 AGYESEISSELHNLKAEEKGYALSYHSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNF 600
           AGYE+EISSELHNLKAE+KGYALS+HSEKLAIAFGVLATPPGRTIRVANN+RTC+DCHNF
Sbjct: 541 AGYEAEISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNF 600

Query: 601 AKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 634
           AKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW
Sbjct: 601 AKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 628

[Close]

BLAST of MS024281 vs. ExPASy TrEMBL
Match: A0A6J1JDE8 (pentatricopeptide repeat-containing protein At3g47530 OS=Cucurbita maxima OX=3661 GN=LOC111484807 PE=3 SV=1)

HSP 1 Score: 1119.0 bits (2893), Expect = 0.0e+00
Identity = 543/634 (85.65%), Postives = 584/634 (92.11%), Query Frame = 0


Query: 1   MKVVFRQFLLRRSLNPQHHISLPRFASTASLLHSPKSLLSSKFRQHNSTTRFSNAPIERE 60
           M V+FR+       +P H + LPRFASTASLLHSP SLLSSKFRQ NST  F     +RE
Sbjct: 1   MTVIFRRCRCSAYRHP-HSLRLPRFASTASLLHSPISLLSSKFRQQNSTLHF-----DRE 60

Query: 61  PLISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPFRELDYSRRFFSQLT 120
           PLISLIKSCTHK QLLQIHAH+IRTS I+DPI++LRFLTR  +APFREL YSRRFFSQLT
Sbjct: 61  PLISLIKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLT 120

Query: 121 NPSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGIRADPLSSSFAIKSCIRIFSLLSGVQ 180
           NP VSHYN +LRAYSLSRSP +GLY+YRDMERQG+ ADPLSSSFA+KSCIR+ SL SG+Q
Sbjct: 121 NPFVSHYNTLLRAYSLSRSPLEGLYMYRDMERQGVHADPLSSSFALKSCIRMLSLFSGIQ 180

Query: 181 IHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTRNKR 240
           IHARIFRNGHQSDSLLLT+MMDLYSHCGKL++ACKLFDEIPQRDVVAWNVLISCLTRNKR
Sbjct: 181 IHARIFRNGHQSDSLLLTSMMDLYSHCGKLKDACKLFDEIPQRDVVAWNVLISCLTRNKR 240

Query: 241 TRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLC 300
           TRDALGLFEIMQSPTYLC+PDKVTCLLLLQACADLNALEFGERIHS+IQ+ GY+TESNLC
Sbjct: 241 TRDALGLFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLC 300

Query: 301 NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEGFWEMQKMGIE 360
           NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIE FW MQK G+E
Sbjct: 301 NSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVE 360

Query: 361 PDDRTFTGVLSACSHCGLVDEGMAFFDRMR-EFKIAPNVHHYGCMVDLLGRAGMLDQAYQ 420
           PDD TFT VLSACSHCGLVDEGMAFFDRMR EF I P VHHYGCMVDLLGRAGMLDQAYQ
Sbjct: 361 PDDHTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQ 420

Query: 421 LAMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSSVGN 480
           L MSME+NPDAT+WRTLLGAC+IHGH NLGE +I HL+E KSQEAGDYVLLLNIYSS GN
Sbjct: 421 LVMSMEVNPDATMWRTLLGACRIHGHANLGERVIEHLVELKSQEAGDYVLLLNIYSSAGN 480

Query: 481 WDKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDDINKQLKI 540
           WDKVTELRKFMKE GIYTTP CTTIELNGVVHEFAVDD+SHPMKD+IY+QLD+IN+QLKI
Sbjct: 481 WDKVTELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINQQLKI 540

Query: 541 AGYESEISSELHNLKAEEKGYALSYHSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNF 600
           AGYE+EISSELHNLKAE+KGYALS+HSEKLAIAFGVLATPPG TIRVANN+RTC+DCHNF
Sbjct: 541 AGYEAEISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGGTIRVANNLRTCLDCHNF 600

Query: 601 AKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 634
           AKYVSSVYNRKVVVRDRS+FHHFREGRCSCNDYW
Sbjct: 601 AKYVSSVYNRKVVVRDRSQFHHFREGRCSCNDYW 628

[Close]

BLAST of MS024281 vs. ExPASy TrEMBL
Match: A0A0A0LUH9 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009750 PE=3 SV=1)

HSP 1 Score: 1054.3 bits (2725), Expect = 2.1e-304
Identity = 508/604 (84.11%), Postives = 554/604 (91.72%), Query Frame = 0


Query: 31  LLHSPKSLLSSKFRQHNSTTRFSNAPIEREPLISLIKSCTHKPQLLQIHAHIIRTSSIKD 90
           +  SP S+LS K+  H+     S +  EREPLISLIKSCTHK QLLQIHAHII TSSI+D
Sbjct: 4   IFRSP-SILSLKYHHHS----ISFSHFEREPLISLIKSCTHKSQLLQIHAHIITTSSIQD 63

Query: 91  PIIALRFLTRAATAPFRELDYSRRFFSQLTNPSVSHYNAMLRAYSLSRSPQDGLYVYRDM 150
           PI++LRFLTR A+APFR+L YSRR F  LTNP VSHYNAMLRAYSLSRSP +GLY+YRDM
Sbjct: 64  PIVSLRFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDM 123

Query: 151 ERQGIRADPLSSSFAIKSCIRIFSLLSGVQIHARIFRNGHQSDSLLLTTMMDLYSHCGKL 210
           ERQG+RADPLSSSFA+KSCI++ SLL G+QIHARIF NGHQ+DSLLLT+MMDLYSHCGK 
Sbjct: 124 ERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFINGHQADSLLLTSMMDLYSHCGKP 183

Query: 211 EEACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQ 270
           EEACKLFDE+PQ+DVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQ
Sbjct: 184 EEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQ 243

Query: 271 ACADLNALEFGERIHSYIQERGYDTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVS 330
           ACADLNALEFGERIH YIQ+ GY+TESNLCNSLISMYSRCGR+DKAYEVFDKM EKNVVS
Sbjct: 244 ACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEVFDKMTEKNVVS 303

Query: 331 WSAMISGLSMNGHGREAIEGFWEMQKMGIEPDDRTFTGVLSACSHCGLVDEGMAFFDRMR 390
           WSAMISGLSMNGHGREAIE FWEMQK G+EP D TFT VLSACSHCGLVDEGMAFFDRMR
Sbjct: 304 WSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSACSHCGLVDEGMAFFDRMR 363

Query: 391 -EFKIAPNVHHYGCMVDLLGRAGMLDQAYQLAMSMEMNPDATLWRTLLGACKIHGHVNLG 450
            EF IAPNVHHYGC+VDLLGRAGMLDQAY+L MSME+ PDAT+WRTLLGAC+IHGH NLG
Sbjct: 364 QEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATMWRTLLGACRIHGHGNLG 423

Query: 451 EHIIGHLIEAKSQEAGDYVLLLNIYSSVGNWDKVTELRKFMKENGIYTTPSCTTIELNGV 510
           E I+ HLIE KSQEAGDYVLLLNIYSS GNWDKVTELRK MKE GIYTTP CTTIELNGV
Sbjct: 424 ERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKEKGIYTTPCCTTIELNGV 483

Query: 511 VHEFAVDDVSHPMKDEIYEQLDDINKQLKIAGYESEISSELHNLKAEEKGYALSYHSEKL 570
           VH+FAVDD+SHPMKD+IY+QLD+INKQLKIAGYE+E+SSELH L+ ++KGYALS HSEKL
Sbjct: 484 VHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHRLEPKDKGYALSNHSEKL 543

Query: 571 AIAFGVLATPPGRTIRVANNIRTCVDCHNFAKYVSSVYNRKVVVRDRSRFHHFREGRCSC 630
           AIAFGVLATPPGRTIR+ANNIRTC+DCHNFAKY+SSVYNRKVVVRDRSRFHHF+EGRCSC
Sbjct: 544 AIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFQEGRCSC 602

Query: 631 NDYW 634
           ND+W
Sbjct: 604 NDFW 602

[Close]

BLAST of MS024281 vs. ExPASy TrEMBL
Match: A0A1S3BV40 (pentatricopeptide repeat-containing protein At3g47530 OS=Cucumis melo OX=3656 GN=LOC103493993 PE=3 SV=1)

HSP 1 Score: 1043.9 bits (2698), Expect = 2.8e-301
Identity = 499/573 (87.09%), Postives = 536/573 (93.54%), Query Frame = 0


Query: 62  LISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPFRELDYSRRFFSQLTN 121
           LISLIKSCTHK QLLQIHAHIIRTSSI+DPI++LRFLTR A+APFR+L YSRRF   LTN
Sbjct: 13  LISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRDLGYSRRFLDLLTN 72

Query: 122 PSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGIRADPLSSSFAIKSCIRIFSLLSGVQI 181
           P VSHYNAMLRAYS+SRSP +GLYVYRDMERQG+RADPLSSSFA+KSCI++ SLL G+QI
Sbjct: 73  PLVSHYNAMLRAYSVSRSPLEGLYVYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQI 132

Query: 182 HARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTRNKRT 241
           HARIF  GHQ+DSLLLT+MMDLYSHCGK EEACKLFDE+PQ+DVVAWNVLISCLTRNKRT
Sbjct: 133 HARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRT 192

Query: 242 RDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLCN 301
           RDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIH YIQ+  Y+TESNLCN
Sbjct: 193 RDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHCYNTESNLCN 252

Query: 302 SLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEGFWEMQKMGIEP 361
           SLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIE FWEMQK G+EP
Sbjct: 253 SLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEP 312

Query: 362 DDRTFTGVLSACSHCGLVDEGMAFFDRMR-EFKIAPNVHHYGCMVDLLGRAGMLDQAYQL 421
           DD TFT VLSACSHCGLVDEGMAFFDRMR E  IAPNVHHYGC+VDLLGRAGMLDQAY+L
Sbjct: 313 DDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQAYEL 372

Query: 422 AMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSSVGNW 481
            MSME+ PDAT+WRTLLGAC+IHGH NLGE I+ HLIE KSQEAGDYVLLLNIYSS G W
Sbjct: 373 IMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSSAGKW 432

Query: 482 DKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDDINKQLKIA 541
           DKVTELRK MKE GIYTTP CTTIELNGVVHEFAVDD+SHPMKD+IY+QLD+INKQLKIA
Sbjct: 433 DKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQLKIA 492

Query: 542 GYESEISSELHNLKAEEKGYALSYHSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNFA 601
           GYE+E+SSELH LK E+KGYALS HSEKLAIAFGVLATPPGRTIRVANNIRTC+DCHNFA
Sbjct: 493 GYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMDCHNFA 552

Query: 602 KYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 634
           KY+SSVYNRKVV+RDRSRFHHF+EGRCSCND+W
Sbjct: 553 KYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW 585

[Close]

BLAST of MS024281 vs. TAIR 10
Match: AT3G47530.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 748.4 bits (1931), Expect = 4.7e-216
Identity = 367/578 (63.49%), Postives = 454/578 (78.55%), Query Frame = 0


Query: 62  LISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPF-RELDYSRRFFSQLT 121
           L+SLI S T K  L QIHA ++RTS I++  +   FL+R A +   R+++YS R FSQ  
Sbjct: 14  LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL 73

Query: 122 NPSVSHYNAMLRAYSLSRSPQDGLYVYRDMER-QGIRADPLSSSFAIKSCIRIFSLLSGV 181
           NP++SH N M+RA+SLS++P +G  ++R + R   + A+PLSSSFA+K CI+   LL G+
Sbjct: 74  NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133

Query: 182 QIHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTRNK 241
           QIH +IF +G  SDSLL+TT+MDLYS C    +ACK+FDEIP+RD V+WNVL SC  RNK
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193

Query: 242 RTRDALGLFEIMQSPTYLC-QPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESN 301
           RTRD L LF+ M++    C +PD VTCLL LQACA+L AL+FG+++H +I E G     N
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253

Query: 302 LCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEGFWEMQKMG 361
           L N+L+SMYSRCG +DKAY+VF  M E+NVVSW+A+ISGL+MNG G+EAIE F EM K G
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313

Query: 362 IEPDDRTFTGVLSACSHCGLVDEGMAFFDRMR--EFKIAPNVHHYGCMVDLLGRAGMLDQ 421
           I P+++T TG+LSACSH GLV EGM FFDRMR  EFKI PN+HHYGC+VDLLGRA +LD+
Sbjct: 314 ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDK 373

Query: 422 AYQLAMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSS 481
           AY L  SMEM PD+T+WRTLLGAC++HG V LGE +I HLIE K++EAGDYVLLLN YS+
Sbjct: 374 AYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYST 433

Query: 482 VGNWDKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDDINKQ 541
           VG W+KVTELR  MKE  I+T P C+ IEL G VHEF VDDVSHP K+EIY+ L +IN+Q
Sbjct: 434 VGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQ 493

Query: 542 LKIAGYESEISSELHNLKA-EEKGYALSYHSEKLAIAFGVLATPPGRTIRVANNIRTCVD 601
           LKIAGY +EI+SELHNL++ EEKGYAL YHSEKLAIAFG+L TPPG TIRV  N+RTCVD
Sbjct: 494 LKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVD 553

Query: 602 CHNFAKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 634
           CHNFAK+VS VY+R V+VRDRSRFHHF+ G CSCND+W
Sbjct: 554 CHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591

[Close]

BLAST of MS024281 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 452.2 bits (1162), Expect = 6.9e-127
Identity = 215/529 (40.64%), Postives = 338/529 (63.89%), Query Frame = 0


Query: 109 LDYSRRFFSQLTNPSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGIRADPLSSSFAIKS 168
           ++ +++ F ++    V  +NAM+  Y+ + + ++ L +++DM +  +R D  +    + +
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275

Query: 169 CIRIFSLLSGVQIHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAW 228
           C +  S+  G Q+H  I  +G  S+  ++  ++DLYS CG+LE AC LF+ +P +DV++W
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISW 335

Query: 229 NVLISCLTRNKRTRDALGLF-EIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSY 288
           N LI   T     ++AL LF E+++S      P+ VT L +L ACA L A++ G  IH Y
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEMLRSGE---TPNDVTMLSILPACAHLGAIDIGRWIHVY 395

Query: 289 IQER--GYDTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGR 348
           I +R  G    S+L  SLI MY++CG ++ A++VF+ +  K++ SW+AMI G +M+G   
Sbjct: 396 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 455

Query: 349 EAIEGFWEMQKMGIEPDDRTFTGVLSACSHCGLVDEGMAFFDRM-REFKIAPNVHHYGCM 408
            + + F  M+K+GI+PDD TF G+LSACSH G++D G   F  M +++K+ P + HYGCM
Sbjct: 456 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCM 515

Query: 409 VDLLGRAGMLDQAYQLAMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEA 468
           +DLLG +G+  +A ++   MEM PD  +W +LL ACK+HG+V LGE    +LI+ + +  
Sbjct: 516 IDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENP 575

Query: 469 GDYVLLLNIYSSVGNWDKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKD 528
           G YVLL NIY+S G W++V + R  + + G+   P C++IE++ VVHEF + D  HP   
Sbjct: 576 GSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNR 635

Query: 529 EIYEQLDDINKQLKIAGYESEISSELHNLKAEEKGYALSYHSEKLAIAFGVLATPPGRTI 588
           EIY  L+++   L+ AG+  + S  L  ++ E K  AL +HSEKLAIAFG+++T PG  +
Sbjct: 636 EIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKL 695

Query: 589 RVANNIRTCVDCHNFAKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 634
            +  N+R C +CH   K +S +Y R+++ RDR+RFHHFR+G CSCNDYW
Sbjct: 696 TIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

[Close]

BLAST of MS024281 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 449.1 bits (1154), Expect = 5.9e-126
Identity = 232/566 (40.99%), Postives = 347/566 (61.31%), Query Frame = 0


Query: 74  QLLQIHAHIIRTS-SIKDPIIALRFLTRAATAPF-RELDYSRRFFSQLTNP-SVSHYNAM 133
           +L QIHA  IR   SI D  +    +    + P    + Y+ + FS++  P +V  +N +
Sbjct: 32  KLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTL 91

Query: 134 LRAYSLSRSPQDGLYVYRDMERQG-IRADPLSSSFAIKSCIRIFSLLSGVQIHARIFRNG 193
           +R Y+   +      +YR+M   G +  D  +  F IK+   +  +  G  IH+ + R+G
Sbjct: 92  IRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSG 151

Query: 194 HQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALGLFE 253
             S   +  +++ LY++CG +  A K+FD++P++D+VAWN +I+    N +  +AL L+ 
Sbjct: 152 FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYT 211

Query: 254 IMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLCNSLISMYSR 313
            M S     +PD  T + LL ACA + AL  G+R+H Y+ + G     +  N L+ +Y+R
Sbjct: 212 EMNSKG--IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYAR 271

Query: 314 CGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEGFWEMQKM-GIEPDDRTFTG 373
           CGRV++A  +FD+M +KN VSW+++I GL++NG G+EAIE F  M+   G+ P + TF G
Sbjct: 272 CGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVG 331

Query: 374 VLSACSHCGLVDEGMAFFDRMR-EFKIAPNVHHYGCMVDLLGRAGMLDQAYQLAMSMEMN 433
           +L ACSHCG+V EG  +F RMR E+KI P + H+GCMVDLL RAG + +AY+   SM M 
Sbjct: 332 ILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ 391

Query: 434 PDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSSVGNWDKVTELR 493
           P+  +WRTLLGAC +HG  +L E     +++ +   +GDYVLL N+Y+S   W  V ++R
Sbjct: 392 PNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIR 451

Query: 494 KFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDDINKQLKIAGYESEIS 553
           K M  +G+   P  + +E+   VHEF + D SHP  D IY +L ++  +L+  GY  +IS
Sbjct: 452 KQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQIS 511

Query: 554 SELHNLKAEEKGYALSYHSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNFAKYVSSVY 613
           +   +++ EEK  A+ YHSEK+AIAF +++TP    I V  N+R C DCH   K VS VY
Sbjct: 512 NVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVY 571

Query: 614 NRKVVVRDRSRFHHFREGRCSCNDYW 634
           NR++VVRDRSRFHHF+ G CSC DYW
Sbjct: 572 NREIVVRDRSRFHHFKNGSCSCQDYW 595

[Close]

BLAST of MS024281 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 442.2 bits (1136), Expect = 7.2e-124
Identity = 225/623 (36.12%), Postives = 361/623 (57.95%), Query Frame = 0


Query: 62  LISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPF--RELDYSRRFFSQL 121
           L   I +C     L QIHA  I++  ++D + A   L   AT+    R+LDY+ + F+Q+
Sbjct: 26  LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85

Query: 122 TNPSVSHYNAMLRAYSLSRSPQDGLYV---YRDMERQGIRADPLSSSFAIKSCIRIFSLL 181
              +   +N ++R +S S   +  + +   Y  M  + +  +  +    +K+C +   + 
Sbjct: 86  PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145

Query: 182 SGVQIHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEA----------------------- 241
            G QIH    + G   D  +++ ++ +Y  CG +++A                       
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205

Query: 242 ------------------CK----LFDEIPQRDVVAWNVLISCLTRNKRTRDALGLFEIM 301
                             CK    LFD++ QR VV+WN +IS  + N   +DA+ +F  M
Sbjct: 206 GEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM 265

Query: 302 QSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLCNSLISMYSRCG 361
           +      +P+ VT + +L A + L +LE GE +H Y ++ G   +  L ++LI MYS+CG
Sbjct: 266 KKGD--IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 325

Query: 362 RVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEGFWEMQKMGIEPDDRTFTGVLS 421
            ++KA  VF+++P +NV++WSAMI+G +++G   +AI+ F +M++ G+ P D  +  +L+
Sbjct: 326 IIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 385

Query: 422 ACSHCGLVDEGMAFFDRMREFK-IAPNVHHYGCMVDLLGRAGMLDQAYQLAMSMEMNPDA 481
           ACSH GLV+EG  +F +M     + P + HYGCMVDLLGR+G+LD+A +  ++M + PD 
Sbjct: 386 ACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDD 445

Query: 482 TLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSSVGNWDKVTELRKFM 541
            +W+ LLGAC++ G+V +G+ +   L++    ++G YV L N+Y+S GNW +V+E+R  M
Sbjct: 446 VIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRM 505

Query: 542 KENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDDINKQLKIAGYESEISSEL 601
           KE  I   P C+ I+++GV+HEF V+D SHP   EI   L +I+ +L++AGY    +  L
Sbjct: 506 KEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVL 565

Query: 602 HNLKAEEKGYALSYHSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNFAKYVSSVYNRK 634
            NL+ E+K   L YHSEK+A AFG+++T PG+ IR+  N+R C DCH+  K +S VY RK
Sbjct: 566 LNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRK 625

[Close]

BLAST of MS024281 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 438.0 bits (1125), Expect = 1.3e-122
Identity = 215/559 (38.46%), Postives = 344/559 (61.54%), Query Frame = 0


Query: 108 ELDYSRRFFSQLTNPSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGIRADPLSSSFAIK 167
           +LD + + F+ +    V  +N+M+  +    SP   L +++ ME + ++A  ++    + 
Sbjct: 181 DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLS 240

Query: 168 SCIRIFSLLSGVQIHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFD--------- 227
           +C +I +L  G Q+ + I  N    +  L   M+D+Y+ CG +E+A +LFD         
Sbjct: 241 ACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT 300

Query: 228 ----------------------EIPQRDVVAWNVLISCLTRNKRTRDALGLFEIMQSPTY 287
                                  +PQ+D+VAWN LIS   +N +  +AL +F  +Q    
Sbjct: 301 WTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKN 360

Query: 288 LCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTESNLCNSLISMYSRCGRVDKA 347
           + + +++T +  L ACA + ALE G  IHSYI++ G     ++ ++LI MYS+CG ++K+
Sbjct: 361 M-KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 420

Query: 348 YEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEGFWEMQKMGIEPDDRTFTGVLSACSHC 407
            EVF+ + +++V  WSAMI GL+M+G G EA++ F++MQ+  ++P+  TFT V  ACSH 
Sbjct: 421 REVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHT 480

Query: 408 GLVDEGMAFFDRMR-EFKIAPNVHHYGCMVDLLGRAGMLDQAYQLAMSMEMNPDATLWRT 467
           GLVDE  + F +M   + I P   HY C+VD+LGR+G L++A +   +M + P  ++W  
Sbjct: 481 GLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGA 540

Query: 468 LLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSSVGNWDKVTELRKFMKENGI 527
           LLGACKIH ++NL E     L+E + +  G +VLL NIY+ +G W+ V+ELRK M+  G+
Sbjct: 541 LLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGL 600

Query: 528 YTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDDINKQLKIAGYESEISSELHNLKA 587
              P C++IE++G++HEF   D +HPM +++Y +L ++ ++LK  GYE EIS  L  ++ 
Sbjct: 601 KKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEE 660

Query: 588 EE-KGYALSYHSEKLAIAFGVLATPPGRTIRVANNIRTCVDCHNFAKYVSSVYNRKVVVR 634
           EE K  +L+ HSEKLAI +G+++T   + IRV  N+R C DCH+ AK +S +Y+R+++VR
Sbjct: 661 EEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVR 720

The following BLAST results are available for this feature:

BLAST of MS024281 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135228.1	0.0e+00	99.05	pentatricopeptide repeat-containing protein At3g47530 [Momordica charantia]	[more]
KAG6589508.1	0.0e+00	86.59	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_023515406.1	0.0e+00	86.44	pentatricopeptide repeat-containing protein At3g47530 [Cucurbita pepo subsp. pep...	[more]
XP_022921651.1	0.0e+00	86.28	pentatricopeptide repeat-containing protein At3g47530 [Cucurbita moschata]	[more]
XP_022987181.1	0.0e+00	85.65	pentatricopeptide repeat-containing protein At3g47530 [Cucurbita maxima]	[more]

BLAST of MS024281 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN85	6.6e-215	63.49	Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana OX...	[more]
Q9LN01	9.7e-126	40.64	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
A8MQA3	8.2e-125	40.99	Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX...	[more]
B8YEK4	7.7e-123	42.12	Pentatricopeptide repeat-containing protein OGR1, mitochondrial OS=Oryza sativa ...	[more]
Q9FI80	1.0e-122	36.12	Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX...	[more]

BLAST of MS024281 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C487	0.0e+00	99.05	pentatricopeptide repeat-containing protein At3g47530 OS=Momordica charantia OX=...	[more]
A0A6J1E1Z3	0.0e+00	86.28	pentatricopeptide repeat-containing protein At3g47530 OS=Cucurbita moschata OX=3...	[more]
A0A6J1JDE8	0.0e+00	85.65	pentatricopeptide repeat-containing protein At3g47530 OS=Cucurbita maxima OX=366...	[more]
A0A0A0LUH9	2.1e-304	84.11	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G0097...	[more]
A0A1S3BV40	2.8e-301	87.09	pentatricopeptide repeat-containing protein At3g47530 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of MS024281 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47530.1	4.7e-216	63.49	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G08070.1	6.9e-127	40.64	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21065.1	5.9e-126	40.99	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G48910.1	7.2e-124	36.12	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G29760.1	1.3e-122	38.46	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 376..570 e-value: 1.4E-20 score: 76.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 62..174 e-value: 4.4E-6 score: 28.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 175..278 e-value: 7.4E-20 score: 73.0 coord: 279..375 e-value: 3.7E-26 score: 93.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 467..495 e-value: 0.034 score: 14.4 coord: 126..155 e-value: 0.0041 score: 17.3 coord: 400..425 e-value: 1.0 score: 9.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 226..253 e-value: 1.0E-4 score: 20.3 coord: 198..226 e-value: 4.0E-4 score: 18.4 coord: 329..362 e-value: 1.5E-4 score: 19.7 coord: 127..158 e-value: 4.6E-6 score: 24.5 coord: 299..328 e-value: 3.0E-7 score: 28.2 coord: 365..398 e-value: 3.4E-6 score: 24.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 326..374 e-value: 2.9E-12 score: 46.6 coord: 223..273 e-value: 8.1E-8 score: 32.4
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 301..323 e-value: 3.9E-6 score: 26.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 296..326 score: 10.369448
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 123..157 score: 10.018685
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 362..396 score: 10.796938
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 327..361 score: 11.4875
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 193..227 score: 9.843305
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 499..623 e-value: 2.5E-36 score: 124.3
None	No IPR available	PANTHER	PTHR47928:SF63	OS08G0434000 PROTEIN	coord: 54..625
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 54..625