MS024279 (gene) Bitter gourd (TR) v1

Overview


Name	MS024279
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold30: 1262628 .. 1265927 (-)
RNA-Seq Expression	MS024279
Synteny	MS024279

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCCCGATCTCATGGCGCGCGCGCGGGCCAAAAGGCAAAAAGATAACGAAATACCGATTTTGGGATCCGCTGCCCTCACGCGTGGGTACGTCATTGTGAGATCGATGAGGGCAACTTTGTAAAACTGCACAAGCGAAGGCTTTGATCTGCTTCTCAAATTCCCAACTTCGTTTGAAAATCTCCAGAAAGAAAGGATTCGAGAATGGGTGATTCCGAGGTATATATTTATTTTGTATAACTCAAAACATTTACAGACTCTCCTCGCCTTCTTTGATTTTTGTTCTTATTTCGGAACGTTTGATTCCGTTTTGTGTTCTTCTTTTTCGAAGATTAATCTTGTTGGCAAGGATGAAGCACTTCGGATGCTTGTTAGGCGTCCAAACAATACTGGATTCTAAGTTAGAATGGTAGAATCAGGGCACTCGTTGATTATGTCTTGTGAGTTGTATCTATCTCTGTTATTTAGTGGTTTTTACGACTTATATTTGGTAATTGAAACAAATGTTTATATAACAGTTGTCAACTACGGTTGCTGGTGTAGATTCCTTGAAATGATTGTGCGAAGTTATTTTTTCTTTCTTCTTTTACCCTGCATTGTGTAGAGGAAATTGATTGTTTAACACCTTTCATTGTGTGAACTTGTGATCCTTATGCTATAACCGATCACTATGCTTATCTTTCTGTGATCAACAACCATAGACTTGATTTTGTTTGCAATTTCAGGTTAGAGAATACGAGATGGCATCTTCAAGTTAATGGAGGAAGATCGAAGTGCTTGAGGCTTGGCTTCGGGAAGCAGAAGGTATAGTGAAAGATATTAGGTAAGAGCTGCGAAAGATTCAGGATGAATTGGAGGGTGCGAAGAACGAGAAAAGACAGACTATGAATGAGCCAAATGTAGCGGGAATTATTGCGAAGAGGAAAGACATGTCATTACGGTCCCAGAAGTCAGAACTCTCTTGGTCATGCTGAATCCACGATTATTTTAAATGGTTCTCTTCTGGAACAGCTCATGAATTGTGAGATGGGTACAATGCTGGCCGAGCAATGGTACAAGTGATATTTCTTTTCAAAGAAGAAAACAAGAGGTACAAGTGACACTGTTATGGGAAATAGCCATGTCAGCTATACTATCTTTACCGCCATTAAAAGGAGAAGCAAAGAATCAGAAGAGAACCTTACAGAAATGGCTACACTCACATGGAATATTTTCTGTAGAAAAATCTGTTTTCATGGACAGGCAAACGATTTCTCACATGAAATACTTAGCAGAAGTGCAGAAGAGATGAGAAGTCCTAACCCACATGGCAAAAATGTGCTGTTAATATAAATATGAAAGTGATGCAGAAAGATGATAGTAATTTCTGAGTGACATTTTGCAGAAAAAGAAATAGTAAGTGGTAAATCAGTGGATAATCTCTTGCGACGATACTGATACACCGCAGTATGGAACTGGGGAAGATTGAAATATAAACAGAATCTGCCTAACGCCTTCAAACTATGCTAAGTAAAAGGGCTGAAGCAATGCATGTACCAGCTGTCCCCAAAATTGACCATATGTAAGAAGAATTCTATCCTATTGAGAAGATGCAGACGAATGGTTGCAGTATTAAATGCCATTTTCCAGAAAAATGAAAGGATATAACACAAGAAAGCTCTCCAAAGCAGGTTCTCTACTAGTGATGCATGTAAATAGATTATGTACCTATTCTTTATTTCTCCAAAATTCCGTCACTAGATAACTCTAGTCAATCAGGGGACAATTAGTCAGAAATGAAATTGATACTCAGAAGCATTGTTTATTTCCTTTAATCTTAAATGTTCCATTGGAAAAAGATAAGTGTTTGTTGATAGAGAAGTCTGGAACCTTTTGGAATTTTTTCATCTCAACAAACAATGATGACATCTTGGATAAGTCGGACACAATTAGGCAGGAAATTTACTTTCAACGGATTGAATACAGCTAGCCAAGCAGCTACTGGAACCATTAAAGACTTGTCAGCTAAGTTCGAGAGGACTGCTTTCAATTTGAATGATGACCCCCACAGGCAACATATAAATATTCACTCTCTTATCTACACATGTTGTAGATAGCATGAGGACTTGCTTACTAGTTTAGAAAGTAATTTATCTCGTAATCAGAGCATTTAAAGAGAAAGACGGGAGAAAGTGATTGGTCTTGTAAAAACTCAGTCAAGCTTCATGGTTGAATCATCTCAAGATAGTTCAGAAACTAGCCATTTTGCTCATCATGTTAGTTATTATCTTTTTCCAAATTCTCTTATGCCACTAAAATTTATTACCTCTAAGCCAGTAACATAATGTGAAACTCACTGGAATGTTATTGAATACTGTGCTGGACATCGTGCTCTGCCTAAAAAGGTGCCACGAACAAAAATGAATTGGCCGTTCTCAGCACAATGAAACTTGTGAGCTATACAGTCCAGACCAGAGTCTCTAGTCAAATTATCTTACTCCATTCTCGCACTAAATATCTGTTGGTATATGACTCTAACAAGATAGTTATGCTCCATCCTGACCTCTTCCTGAATTTGTTCACATCTTCAGATTATGTTGATTCGTCATCATATTGAGCAATCAATGAGCTAGCTGGATAAATGTTAGCATTCAATTTAATTTGTAGGGATAAAACAAAGGGGAACACTTCCCCCAGTTGGATTGTAGGGTTCCTGGATTGGAAACCTGCAAGATTTGGGAATCATGAAAATGTGAATTCTATCTCTATGGGTACCTACCTCTTAGTGCTTGTGAACTCATAATGTCCTAGTGAGTGATCCAAGGGTCTTTTAAAGGTTATTATATTCAATAATCGAAGCTATATTTAGCTTCTTCCCCCTTTCTCATTATTAGAATAGAATTGTTTATTGTAAAGTTTTGAATGTGCTAATAGACTGCCCATCCCATCGCATTGGCAAAGGAATTTGTCAAGAGAGGGTTGAATGACACTTTCAAACACCTTTTTGAATAGCCTACCTTCCTTCTTTATATCTTCCAATTTTGAGCAAGGTGCTGACTTTTTTGGAAAGGCAAAAGAGGACTTCTCTTGGGGTGCTGAAGAGGTGGGAATGGCTAGTCATATATGGTCAAGTGGATCATTAAGTTTCTTTCCTTAGTTAAGGGAGGGTTAGGCATTGGTAATTAAGAAAAAGGAACAAAGGCGTTAATGGCCAAGTGGTTTTTGAAACTTCCCAATGAATAACGATACGAAGTCATCTCAGATTCCAAGCTTGTATGGGAAAGATAAAGAGGGTGGTCAGCAAGAGAACGGAAGATAG

mRNA sequence

ATGAGGCCCGATCTCATGGCGCGCGCGCGGGCCAAAAGGCAAAAAGATAACGAAATACCGATTTTGGGATCCGCTGCCCTCACGCGTGGGTTAGAGAATACGAGATGGCATCTTCAAGTTAATGGAGGAAGATCGAAGTGCTTGAGGCTTGGCTTCGGGAAGCAGAAGCAAGGTGCTGACTTTTTTGGAAAGGCAAAAGAGGACTTCTCTTGGGGTGCTGAAGAGGTGGGAATGGCTAGTCATATATGGTCAAGTGGATCATTAAGTTTCTTTCCTTAGTTAAGGGAGGGTTAGGCATTGGTAATTAAGAAAAAGGAACAAAGGCGTTAATGGCCAAGTGGTTTTTGAAACTTCCCAATGAATAACGATACGAAGTCATCTCAGATTCCAAGCTTGTATGGGAAAGATAAAGAGGGTGGTCAGCAAGAGAACGGAAGATAG

Coding sequence (CDS)

ATGAGGCCCGATCTCATGGCGCGCGCGCGGGCCAAAAGGCAAAAAGATAACGAAATACCGATTTTGGGATCCGCTGCCCTCACGCGTGGGTTAGAGAATACGAGATGGCATCTTCAAGTTAATGGAGGAAGATCGAAGTGCTTGAGGCTTGGCTTCGGGAAGCAGAAGCAAGGTGCTGACTTTTTTGGAAAGGCAAAAGAGGACTTCTCTTGGGGTGCTGAAGAGGTGGGAATGGCTAGTCATATATGGTCAAGTGGATCATTAAGTTTCTTTCCTTAGTTAAGGGAGGGTTAGGCATTGGTAATTAAGAAAAAGGAACAAAGGCGTTAATGGCCAAGTGGTTTTTGAAACTTCCCAATGAATAACGATACGAAGTCATCTCAGATTCCAAGCTTGTATGGGAAAGATAAAGAGGGTGGTCAGCAAGAGAACGGAAGATAG

Protein sequence

MRPDLMARARAKRQKDNEIPILGSAALTRGLENTRWHLQVNGGRSKCLRLGFGKQKQGADFFGKAKEDFSWGAEEVGMASHIWSSGSLSFFPULREGUALVIKKKEQRRUWPSGFUNFPMNNDTKSSQIPSLYGKDKEGGQQENGR

Homology

The following BLAST results are available for this feature:

BLAST of MS024279 vs.


Match Name	E-value	Identity	Description

BLAST of MS024279 vs.


Match Name	E-value	Identity	Description

BLAST of MS024279 vs.


Match Name	E-value	Identity	Description

BLAST of MS024279 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS024279.1	MS024279.1	mRNA