Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTTGGGAGATACAAATGAAGACTTTGAGATGGGGGTTGAAACTCTCCTGGAAGATGCTTCCAGTGATGAAGAGGGAGATTCATATCCCTCGAATGATGTGAAATTTTCAAAAGAACAATGGAAGAATTTTAGGGCACTATCGAGGTCTGCCCTAATTATAAAAGTTCTAGGCAAGTCTTTTGGGTACCCATTTCTTCTCCGAAGGTTAACGGCAATCTGGAAACTGAAAGGGCATTTCAAGTTGATCAACCTTAGTAATGAGTTCTTTATTGCGCGTCTGGACTTGAAGGAGGATCGAGACAGGGTTCTTATGGAGGGCCCCTGGAAGATTTTAGACCACTACCTTGCGGTTCGGAGTTGGTCTCCCAAATTTAGGCCTTCAACAGTGACTATTGACAGGGCTGCTTTGTGGGTTCGTATCCCTGATTGCCCGATGGAACTTTATAATGAGACAGGAATGAAGGGAATCGGGCATTTCATAGGCAAGACTCTAAAAATTGATTTCAAGACTCAATCCGGGAAGATGGGCCACTTTGCGAGAATCTACGTTGAGGTGGACCTTACGAAGAAGCCTCGACGTGACTTTACAATTTTATGAGAAAGGTATGGAATCCAATATGAAGGGATACATTTAGTCTGTTTCAACTGTGGGGTGTATGGGCACAAATTTGAGGAGTGTCCCTTGAGATGCAACACTGAAACGAAGGCTAACGATAACTCATCTGGAATTCTTGATTCCGTTGGTGGAGATTCGAGGGTTCCAAAGGAAAGCAATATCTCTGAGTTTTCTCAAAAGCCTTTCATACCAGTGCCAGTTTCTCAGCCAAATCGTTCACCTGGTCATGGGCCTTGGATGTTGGTAGATCATTCCAAGAGAAATGGGGGAGGTAAACCACCTCGTACAAGGTCAGAGAGAGGTTTCGTATCATCTAAAAACTTGAACACTAAGTGGAATGCAAATCTGGACCCAAATGAAGAGTCGACGAATGTTCTTGACCCAATTGTTGATCCAACTGTGGAGCGTGATCCTATAAAGTCTTTCCAAGTTAAGTCAGTTGAGAGGGTGAGGTTAGCAAGAGATCAAGACTCTTGGAGGTTTAAGAACAAGATTCCTTTTGCTGGACCTGGGGCAAATTTTTCAGGTCTTCCTTTCAATTATTAG
mRNA sequence
ATGGTTTTGGGAGATACAAATGAAGACTTTGAGATGGGGGTTGAAACTCTCCTGGAAGATGCTTCCAGTGATGAAGAGGGAGATTCATATCCCTCGAATGATGTGAAATTTTCAAAAGAACAATGGAAGAATTTTAGGGCACTATCGAGGTCTGCCCTAATTATAAAAGTTCTAGGCAAGTCTTTTGGGTACCCATTTCTTCTCCGAAGGTTAACGGCAATCTGGAAACTGAAAGGGCATTTCAAGTTGATCAACCTTAGTAATGAGTTCTTTATTGCGCGTCTGGACTTGAAGGAGGATCGAGACAGGGTTCTTATGGAGGGCCCCTGGAAGATTTTAGACCACTACCTTGCGGTTCGGAGTTGGTCTCCCAAATTTAGGCCTTCAACAGTGACTATTGACAGGGCTGCTTTGTGGGTTCGTATCCCTGATTGCCCGATGGAACTTTATAATGAGACAGGAATGAAGGGAATCGGGCATTTCATAGGCAAGACTCTAAAAATTGATTTCAAGACTCAATCCGGGAAGATGGGCCACTTTGCGAGAATCTACGTTGAGGTGGACCTTACGAAGAAGCCTCGACGTGACTTTACAATTTTATGAGAAAGGTATGGAATCCAATATGAAGGGATACATTTAGTCTGTTTCAACTGTGGGGTGTATGGGCACAAATTTGAGGAGTGTCCCTTGAGATGCAACACTGAAACGAAGGCTAACGATAACTCATCTGGAATTCTTGATTCCGTTGGTGGAGATTCGAGGGTTCCAAAGGAAAGCAATATCTCTGAGTTTTCTCAAAAGCCTTTCATACCAGTGCCAGTTTCTCAGCCAAATCGTTCACCTGGTCATGGGCCTTGGATGTTGGTAGATCATTCCAAGAGAAATGGGGGAGGTAAACCACCTCGTACAAGGTCAGAGAGAGGTTTCGTATCATCTAAAAACTTGAACACTAAGTGGAATGCAAATCTGGACCCAAATGAAGAGTCGACGAATGTTCTTGACCCAATTGTTGATCCAACTGTGGAGCGTGATCCTATAAAGTCTTTCCAAGTTAAGTCAGTTGAGAGGGTGAGGTTAGCAAGAGATCAAGACTCTTGGAGGTTTAAGAACAAGATTCCTTTTGCTGGACCTGGGGCAAATTTTTCAGGTCTTCCTTTCAATTATTAG
Coding sequence (CDS)
ATGGTTTTGGGAGATACAAATGAAGACTTTGAGATGGGGGTTGAAACTCTCCTGGAAGATGCTTCCAGTGATGAAGAGGGAGATTCATATCCCTCGAATGATGTGAAATTTTCAAAAGAACAATGGAAGAATTTTAGGGCACTATCGAGGTCTGCCCTAATTATAAAAGTTCTAGGCAAGTCTTTTGGGTACCCATTTCTTCTCCGAAGGTTAACGGCAATCTGGAAACTGAAAGGGCATTTCAAGTTGATCAACCTTAGTAATGAGTTCTTTATTGCGCGTCTGGACTTGAAGGAGGATCGAGACAGGGTTCTTATGGAGGGCCCCTGGAAGATTTTAGACCACTACCTTGCGGTTCGGAGTTGGTCTCCCAAATTTAGGCCTTCAACAGTGACTATTGACAGGGCTGCTTTGTGGGTTCGTATCCCTGATTGCCCGATGGAACTTTATAATGAGACAGGAATGAAGGGAATCGGGCATTTCATAGGCAAGACTCTAAAAATTGATTTCAAGACTCAATCCGGGAAGATGGGCCACTTTGCGAGAATCTACGTTGAGGTGGACCTTACGAAGAAGCCTCGACGTGACTTTACAATTTTATGAGAAAGGTATGGAATCCAATATGAAGGGATACATTTAGTCTGTTTCAACTGTGGGGTGTATGGGCACAAATTTGAGGAGTGTCCCTTGAGATGCAACACTGAAACGAAGGCTAACGATAACTCATCTGGAATTCTTGATTCCGTTGGTGGAGATTCGAGGGTTCCAAAGGAAAGCAATATCTCTGAGTTTTCTCAAAAGCCTTTCATACCAGTGCCAGTTTCTCAGCCAAATCGTTCACCTGGTCATGGGCCTTGGATGTTGGTAGATCATTCCAAGAGAAATGGGGGAGGTAAACCACCTCGTACAAGGTCAGAGAGAGGTTTCGTATCATCTAAAAACTTGAACACTAAGTGGAATGCAAATCTGGACCCAAATGAAGAGTCGACGAATGTTCTTGACCCAATTGTTGATCCAACTGTGGAGCGTGATCCTATAAAGTCTTTCCAAGTTAAGTCAGTTGAGAGGGTGAGGTTAGCAAGAGATCAAGACTCTTGGAGGTTTAAGAACAAGATTCCTTTTGCTGGACCTGGGGCAAATTTTTCAGGTCTTCCTTTCAATTATTAG
Protein sequence
MVLGDTNEDFEMGVETLLEDASSDEEGDSYPSNDVKFSKEQWKNFRALSRSALIIKVLGKSFGYPFLLRRLTAIWKLKGHFKLINLSNEFFIARLDLKEDRDRVLMEGPWKILDHYLAVRSWSPKFRPSTVTIDRAALWVRIPDCPMELYNETGMKGIGHFIGKTLKIDFKTQSGKMGHFARIYVEVDLTKKPRRDFTILUERYGIQYEGIHLVCFNCGVYGHKFEECPLRCNTETKANDNSSGILDSVGGDSRVPKESNISEFSQKPFIPVPVSQPNRSPGHGPWMLVDHSKRNGGGKPPRTRSERGFVSSKNLNTKWNANLDPNEESTNVLDPIVDPTVERDPIKSFQVKSVERVRLARDQDSWRFKNKIPFAGPGANFSGLPFNY
Homology
BLAST of MS024016 vs. NCBI nr
Match:
XP_022153253.1 (uncharacterized protein LOC111020790 [Momordica charantia])
HSP 1 Score: 335.5 bits (859), Expect = 6.1e-88
Identity = 159/180 (88.33%), Postives = 165/180 (91.67%), Query Frame = 0
Query: 209 EGIHLVCFNCGVYGHKFEECPLRCNTETKANDNSSGILDSVGGDSRVPKESNISEFSQKP 268
+GIHLVCFNCGVYGHK EECPLRCNTETK NDNSSGILDSVG DSRVPKESNI EF QKP
Sbjct: 6 KGIHLVCFNCGVYGHKLEECPLRCNTETKVNDNSSGILDSVGADSRVPKESNIPEFPQKP 65
Query: 269 FIPVPVSQPNRSPGHGPWMLVDHSKRNGGGKPPRTRSERGFVSSKNLNTKWNANLDPNEE 328
FIPV VSQ N SPGHGPWMLVDHSKRNGGGKPPRTRS RGF+SSKNLNTKWN N DPNEE
Sbjct: 66 FIPVTVSQLNPSPGHGPWMLVDHSKRNGGGKPPRTRSGRGFISSKNLNTKWNLNSDPNEE 125
Query: 329 STNVLDPIVDPTVERDPIKSFQVKSVERVRLARDQDSWRFKNKIPFAGPGANFSGLPFNY 388
NVLD IVDPT++RDPIKSFQ+KSVERVRLARDQDSWRFKNKIPFAGPGANFS LPF+Y
Sbjct: 126 PMNVLDTIVDPTMKRDPIKSFQIKSVERVRLARDQDSWRFKNKIPFAGPGANFSSLPFDY 185
BLAST of MS024016 vs. NCBI nr
Match:
XP_034894450.1 (uncharacterized protein LOC118033543 isoform X2 [Populus alba])
HSP 1 Score: 221.5 bits (563), Expect = 1.3e-53
Identity = 110/273 (40.29%), Postives = 155/273 (56.78%), Query Frame = 0
Query: 19 EDASSDEEGDSYPSND---VKFSKEQWKNFRALSRSALIIKVLGKSFGYPFLLRRLTAIW 78
ED +SD++ + D ++ S E+ K R R LIIKVLG+ Y FLL+RL +W
Sbjct: 68 EDFASDDDEEDEEEEDCPVIRLSMEEKKRIREPWRQTLIIKVLGRRVSYTFLLKRLQIMW 127
Query: 79 KLKGHFKLINLSNEFFIARLDLKEDRDRVLMEGPWKILDHYLAVRSWSPKFRPSTVTIDR 138
K++G L++L N+FF+AR KEDR+ + GPW + DHYL +RSW P F P+ TI++
Sbjct: 128 KIQGDMNLVDLGNDFFLARFSNKEDREFAMSGGPWMVADHYLTMRSWHPNFDPNVATIEK 187
Query: 139 AALWVRIPDCPMELYNETGMKGIGHFIGKTLKIDFKTQSGKMGHFARIYVEVDLTKKPRR 198
A+W+R+PD ME Y+ + IG+ IGKTLK+D T G G++ARI VEVDLTK
Sbjct: 188 VAVWIRLPDLAMEYYDTAVLWKIGNHIGKTLKVDRTTSVGMRGNYARICVEVDLTKPLLS 247
Query: 199 DFTILXERYGIQYEGIHLVCFNCGVYGHKFEECPLRCNTETKANDNSSGILDSVGGDSRV 258
F + I YEG+H++CF CG YGHK + CP N E + ++ + G D V
Sbjct: 248 KFKLRRRIRRISYEGLHMICFGCGQYGHKHDMCPFSMNKEDRNDEQQVSSNNGKGRDPTV 307
Query: 259 PKESNISEFSQKPFIPVPVSQPNRSPGHGPWML 289
P E V +P + +G WM+
Sbjct: 308 PAEDT-------------VVRPEVAENYGQWMV 327
BLAST of MS024016 vs. NCBI nr
Match:
XP_034894449.1 (uncharacterized protein LOC118033543 isoform X1 [Populus alba])
HSP 1 Score: 221.5 bits (563), Expect = 1.3e-53
Identity = 110/273 (40.29%), Postives = 155/273 (56.78%), Query Frame = 0
Query: 19 EDASSDEEGDSYPSND---VKFSKEQWKNFRALSRSALIIKVLGKSFGYPFLLRRLTAIW 78
ED +SD++ + D ++ S E+ K R R LIIKVLG+ Y FLL+RL +W
Sbjct: 68 EDFASDDDEEDEEEEDCPVIRLSMEEKKRIREPWRQTLIIKVLGRRVSYTFLLKRLQIMW 127
Query: 79 KLKGHFKLINLSNEFFIARLDLKEDRDRVLMEGPWKILDHYLAVRSWSPKFRPSTVTIDR 138
K++G L++L N+FF+AR KEDR+ + GPW + DHYL +RSW P F P+ TI++
Sbjct: 128 KIQGDMNLVDLGNDFFLARFSNKEDREFAMSGGPWMVADHYLTMRSWHPNFDPNVATIEK 187
Query: 139 AALWVRIPDCPMELYNETGMKGIGHFIGKTLKIDFKTQSGKMGHFARIYVEVDLTKKPRR 198
A+W+R+PD ME Y+ + IG+ IGKTLK+D T G G++ARI VEVDLTK
Sbjct: 188 VAVWIRLPDLAMEYYDTAVLWKIGNHIGKTLKVDRTTSVGMRGNYARICVEVDLTKPLLS 247
Query: 199 DFTILXERYGIQYEGIHLVCFNCGVYGHKFEECPLRCNTETKANDNSSGILDSVGGDSRV 258
F + I YEG+H++CF CG YGHK + CP N E + ++ + G D V
Sbjct: 248 KFKLRRRIRRISYEGLHMICFGCGQYGHKHDMCPFSMNKEDRNDEQQVSSNNGKGRDPTV 307
Query: 259 PKESNISEFSQKPFIPVPVSQPNRSPGHGPWML 289
P E V +P + +G WM+
Sbjct: 308 PAEDT-------------VVRPEVAENYGQWMV 327
BLAST of MS024016 vs. NCBI nr
Match:
KAG6772677.1 (hypothetical protein POTOM_024095 [Populus tomentosa])
HSP 1 Score: 221.5 bits (563), Expect = 1.3e-53
Identity = 110/273 (40.29%), Postives = 155/273 (56.78%), Query Frame = 0
Query: 19 EDASSDEEGDSYPSND---VKFSKEQWKNFRALSRSALIIKVLGKSFGYPFLLRRLTAIW 78
ED +SD++ + D ++ S E+ K R R LIIKVLG+ Y FLL+RL +W
Sbjct: 68 EDFASDDDEEDEEEEDCPVIRLSMEEKKRIREPWRQTLIIKVLGRRVSYTFLLKRLQIMW 127
Query: 79 KLKGHFKLINLSNEFFIARLDLKEDRDRVLMEGPWKILDHYLAVRSWSPKFRPSTVTIDR 138
K++G L++L N+FF+AR KEDR+ + GPW + DHYL +RSW P F P+ TI++
Sbjct: 128 KIQGDMNLVDLGNDFFLARFSNKEDREFAMSGGPWMVADHYLTMRSWHPNFDPNVATIEK 187
Query: 139 AALWVRIPDCPMELYNETGMKGIGHFIGKTLKIDFKTQSGKMGHFARIYVEVDLTKKPRR 198
A+W+R+PD ME Y+ + IG+ IGKTLK+D T G G++ARI VEVDLTK
Sbjct: 188 VAVWIRLPDLAMEYYDTAVLWKIGNHIGKTLKVDRTTSVGMRGNYARICVEVDLTKPLLS 247
Query: 199 DFTILXERYGIQYEGIHLVCFNCGVYGHKFEECPLRCNTETKANDNSSGILDSVGGDSRV 258
F + I YEG+H++CF CG YGHK + CP N E + ++ + G D V
Sbjct: 248 KFKLRRRIRRISYEGLHMICFGCGQYGHKHDMCPFSMNKEDRNDEQQVSSNNGKGRDPTV 307
Query: 259 PKESNISEFSQKPFIPVPVSQPNRSPGHGPWML 289
P E V +P + +G WM+
Sbjct: 308 PAEDT-------------VVRPEVAENYGQWMV 327
BLAST of MS024016 vs. NCBI nr
Match:
KAG6752401.1 (hypothetical protein POTOM_044628 [Populus tomentosa])
HSP 1 Score: 221.5 bits (563), Expect = 1.3e-53
Identity = 110/273 (40.29%), Postives = 155/273 (56.78%), Query Frame = 0
Query: 19 EDASSDEEGDSYPSND---VKFSKEQWKNFRALSRSALIIKVLGKSFGYPFLLRRLTAIW 78
ED +SD++ + D ++ S E+ K R R LIIKVLG+ Y FLL+RL +W
Sbjct: 68 EDFASDDDEEDEEEEDCPVIRLSMEEKKRIREPWRQTLIIKVLGRRVSYTFLLKRLQIMW 127
Query: 79 KLKGHFKLINLSNEFFIARLDLKEDRDRVLMEGPWKILDHYLAVRSWSPKFRPSTVTIDR 138
K++G L++L N+FF+AR KEDR+ + GPW + DHYL +RSW P F P+ TI++
Sbjct: 128 KIQGDMNLVDLGNDFFLARFSNKEDREFAMSGGPWMVADHYLTMRSWHPNFDPNVATIEK 187
Query: 139 AALWVRIPDCPMELYNETGMKGIGHFIGKTLKIDFKTQSGKMGHFARIYVEVDLTKKPRR 198
A+W+R+PD ME Y+ + IG+ IGKTLK+D T G G++ARI VEVDLTK
Sbjct: 188 VAVWIRLPDLAMEYYDTAVLWKIGNHIGKTLKVDRTTSVGMRGNYARICVEVDLTKPLLS 247
Query: 199 DFTILXERYGIQYEGIHLVCFNCGVYGHKFEECPLRCNTETKANDNSSGILDSVGGDSRV 258
F + I YEG+H++CF CG YGHK + CP N E + ++ + G D V
Sbjct: 248 KFKLRRRIRRISYEGLHMICFGCGQYGHKHDMCPFSMNKEDRNDEQQVSSNNGKGRDPTV 307
Query: 259 PKESNISEFSQKPFIPVPVSQPNRSPGHGPWML 289
P E V +P + +G WM+
Sbjct: 308 PAEDT-------------VVRPEVAENYGQWMV 327
BLAST of MS024016 vs. ExPASy TrEMBL
Match:
A0A6J1DGZ9 (uncharacterized protein LOC111020790 OS=Momordica charantia OX=3673 GN=LOC111020790 PE=4 SV=1)
HSP 1 Score: 335.5 bits (859), Expect = 3.0e-88
Identity = 159/180 (88.33%), Postives = 165/180 (91.67%), Query Frame = 0
Query: 209 EGIHLVCFNCGVYGHKFEECPLRCNTETKANDNSSGILDSVGGDSRVPKESNISEFSQKP 268
+GIHLVCFNCGVYGHK EECPLRCNTETK NDNSSGILDSVG DSRVPKESNI EF QKP
Sbjct: 6 KGIHLVCFNCGVYGHKLEECPLRCNTETKVNDNSSGILDSVGADSRVPKESNIPEFPQKP 65
Query: 269 FIPVPVSQPNRSPGHGPWMLVDHSKRNGGGKPPRTRSERGFVSSKNLNTKWNANLDPNEE 328
FIPV VSQ N SPGHGPWMLVDHSKRNGGGKPPRTRS RGF+SSKNLNTKWN N DPNEE
Sbjct: 66 FIPVTVSQLNPSPGHGPWMLVDHSKRNGGGKPPRTRSGRGFISSKNLNTKWNLNSDPNEE 125
Query: 329 STNVLDPIVDPTVERDPIKSFQVKSVERVRLARDQDSWRFKNKIPFAGPGANFSGLPFNY 388
NVLD IVDPT++RDPIKSFQ+KSVERVRLARDQDSWRFKNKIPFAGPGANFS LPF+Y
Sbjct: 126 PMNVLDTIVDPTMKRDPIKSFQIKSVERVRLARDQDSWRFKNKIPFAGPGANFSSLPFDY 185
BLAST of MS024016 vs. ExPASy TrEMBL
Match:
A0A6N2LZK8 (CCHC-type domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS289963 PE=4 SV=1)
HSP 1 Score: 214.5 bits (545), Expect = 7.6e-52
Identity = 118/321 (36.76%), Postives = 173/321 (53.89%), Query Frame = 0
Query: 2 VLGDTNEDFEMGVETLLEDASSDEEGDSYPSND---VKFSKEQWKNFRALSRSALIIKVL 61
++G+++ EM + L D S++E D +D +K S E+ K RA + LIIK++
Sbjct: 42 LMGESSVTHEMDEDNLPNDCISEDEDDDADEDDCPVIKISSEEKKRIRAPWKQTLIIKLM 101
Query: 62 GKSFGYPFLLRRLTAIWKLKGHFKLINLSNEFFIARLDLKEDRDRVLMEGPWKILDHYLA 121
G+ GY F ++RL +WKL+G F L +L NEF++A+ EDR+ VL GPW + DHYL
Sbjct: 102 GRKVGYMFFMQRLRNMWKLRGDFTLTDLGNEFYLAKFANPEDREHVLFGGPWMVTDHYLT 161
Query: 122 VRSWSPKFRPSTVTIDRAALWVRIPDCPMELYNETGMKGIGHFIGKTLKIDFKTQSGKMG 181
+R+W P F P TID+ A+WVR+P+ +E Y+ + IG IGKTLKID T G G
Sbjct: 162 IRTWHPNFDPFEATIDKVAVWVRLPELALEYYDTAVLWKIGDKIGKTLKIDRTTSVGMRG 221
Query: 182 HFARIYVEVDLTKKPRRDFTILXERYGIQYEGIHLVCFNCGVYGHKFEECPLRCNTETKA 241
+FAR+ VEVDLTK F + I YEG+H +CF+CG YGHK E CP
Sbjct: 222 NFARLCVEVDLTKPLLAKFKLRRRVRRIMYEGLHSICFHCGQYGHKQELCP--------- 281
Query: 242 NDNSSGILDSVGGDSRVPKES--NISEFSQKPFIPVPVSQPNRSPGHGPWMLVDHSKRNG 301
++P E+ + SE + VP+ +P G WM+ + +R
Sbjct: 282 ---------------QIPHENKDHSSEKEKTEVQEVPIIRPEIMESFGSWMVAERRQRRP 338
Query: 302 GGK---PPRTRSERGFVSSKN 315
+ R+ +G V++ N
Sbjct: 342 NKRTVMEENNRNGKGGVTAVN 338
BLAST of MS024016 vs. ExPASy TrEMBL
Match:
A0A2N9GMU3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28533 PE=4 SV=1)
HSP 1 Score: 199.1 bits (505), Expect = 3.3e-47
Identity = 119/353 (33.71%), Postives = 177/353 (50.14%), Query Frame = 0
Query: 22 SSDEEGDSYPSNDVKFS--KEQWKNFRALSRSALIIKVLGKSFGYPFLLRRLTAIWKLKG 81
SSDEE D +V S +E RA ++ I+KV G+S GY FL+ RL ++WK G
Sbjct: 87 SSDEEDDPPEDGEVVISIPRETKLRIRAPWSTSFIVKVFGRSVGYLFLVNRLKSLWKPIG 146
Query: 82 HFKLINLSNEFFIARLDLKEDRDRVLMEGPWKILDHYLAVRSWSPKFRPSTVTIDRAALW 141
F ++L FF+ +LDL +D DR+L GPW I +H+L++R W P FRPS +++ +W
Sbjct: 147 GFSCVDLGLGFFLVKLDLADDFDRILKGGPWFIGEHFLSLRPWVPDFRPSEASVNTVVVW 206
Query: 142 VRIPDCPMELYNETGMKGIGHFIGKTLKIDFKTQSGKMGHFARIYVEVDLTKKPRRDFTI 201
VR+P+ P+E Y++ + IGH +G L++DF T SG G FAR+ +++DL K + +
Sbjct: 207 VRLPELPVEYYDKESLLLIGHALGHVLRVDFNTASGTRGRFARLCIQLDLDKPLIKTVRV 266
Query: 202 LXERYGIQYEGIHLVCFNCGVYGHKFEECPLRCNTETKANDNSSGILDSVGGDSRVPKES 261
R + YEGI L+CF+CG GHK ++CP R T T + D+
Sbjct: 267 GKVRQAVIYEGIGLLCFHCGRIGHKIDKCPERGGT-TSLTPTAPAQFDA----------- 326
Query: 262 NISEFSQKPFIPVPVSQPNRSPG--HGPWMLVDHSKRNGGGKP---PRTRSERGFVS--- 321
P P + P+R GPWMLV KR KP R+R E V+
Sbjct: 327 -----------PPPTNSPDRDAESIFGPWMLVSRCKRQNKPKPDNFARSREENSVVTLAP 386
Query: 322 --------SKNLNT------------KWNANLDPNEESTNVLDPIVDPTVERD 345
N +T +W ++ +PN + V++P+ P D
Sbjct: 387 GRAAQTNKDGNASTSSPKKTKQAPQFRWKSSANPNPKGKAVVEPLRSPPTGPD 416
BLAST of MS024016 vs. ExPASy TrEMBL
Match:
A0A1R3IXK3 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_09149 PE=4 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 5.7e-47
Identity = 114/335 (34.03%), Postives = 174/335 (51.94%), Query Frame = 0
Query: 20 DASSDEEGDSYPSND-VKFSKEQWKNFRALSRSALIIKVLGKSFGYPFLLRRLTAIWKLK 79
DA SD E +D + FSKE+ + R R+ALI+K+LGK G+ L R+ +WKL+
Sbjct: 82 DADSDTETMGEGDDDCITFSKEEKEAMRKPWRNALIVKLLGKVLGFSALTSRINQLWKLE 141
Query: 80 GHFKLINLSNEFFIARLDLKEDRDRVLMEGPWKILDHYLAVRSWSPKFRPSTVTIDRAAL 139
G +K+ +L +++FI R K D + VL GPW I HYL VR W P F PS+ I++ +
Sbjct: 142 GDYKVTDLEHDYFIIRFQKKVDYEHVLEGGPWIIGGHYLTVRQWRPNFMPSSDKIEKLII 201
Query: 140 WVRIPDCPMELYNETGMKGIGHFIGKTLKIDFKTQSGKMGHFARIYVEVDLTKKPRRDFT 199
W+R P+ P+E +N +K +G +G+ +KID T G G FAR+ VE+DL+K + T
Sbjct: 202 WIRFPNIPVEYFNMIALKKMGGKVGRVIKIDQVTDEGTRGKFARVCVELDLSKPLKPRLT 261
Query: 200 ILXERYGIQYEGIHLVCFNCGVYGHKFEECPLRCNTETKANDNSSGILDSVGGDSRVPKE 259
+ I+YEG+ L+CF+CG++GH+ +CPL+ + ++ P+
Sbjct: 262 VEGRDVLIEYEGLSLICFDCGIFGHRKSDCPLQKPSSSEKEGE--------------PQP 321
Query: 260 SNISEFSQKPFIPVPVSQPNRSPGHGPWMLVDHSKRN-----------GGGKPPRTRSER 319
S + E ++P + +GPWM+V KRN GGK
Sbjct: 322 SMVPETQEEP----------KDQTYGPWMMVQRRKRNPGKPGAAQGVIHGGKSVIRDFRN 381
Query: 320 GF-----VSSKNLNTKWNANLDPNEESTNVLDPIV 338
GF V++ NLN K +AN E P++
Sbjct: 382 GFDYHKGVTADNLNVKKSANFKGVMEKNKGDAPVI 392
BLAST of MS024016 vs. ExPASy TrEMBL
Match:
A0A2N9HXU9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44383 PE=4 SV=1)
HSP 1 Score: 193.7 bits (491), Expect = 1.4e-45
Identity = 104/280 (37.14%), Postives = 149/280 (53.21%), Query Frame = 0
Query: 19 EDASSDEEGDSYPSND----VKFSKEQWKNFRALSRSALIIKVLGKSFGYPFLLRRLTAI 78
E SSDEE D P + +KF++E RA ++LI+KV G+S GY FL+ +L +
Sbjct: 82 EIISSDEENDEEPPEEGEVVIKFTRELKHRIRAPWSTSLIVKVFGRSVGYVFLVNKLKTM 141
Query: 79 WKLKGHFKLINLSNEFFIARLDLKEDRDRVLMEGPWKILDHYLAVRSWSPKFRPSTVTID 138
W G+F ++L FF+ R D + + VL GPW I +H+L++R W P FR S ++
Sbjct: 142 WNFAGNFSCVDLGLGFFLIRFDSQSGFEEVLKRGPWFIGEHFLSLRPWVPNFRASEASVK 201
Query: 139 RAALWVRIPDCPMELYNETGMKGIGHFIGKTLKIDFKTQSGKMGHFARIYVEVDLTKKPR 198
A+WVR+P+ P+E Y++ + IG +G L++DF T +G G FARI V++DL K
Sbjct: 202 TVAIWVRLPELPVEYYHKDSLLHIGSGLGPVLRVDFNTAAGTRGRFARICVQIDLDKPLA 261
Query: 199 RDFTILXERYGIQYEGIHLVCFNCGVYGHKFEECPLRCNTETKANDNSSGILDSVGGDSR 258
R + R + YEGI L+CF+CG GH+ E CP R + DN + I DSR
Sbjct: 262 RTVRVGKTRLAVIYEGIGLLCFHCGRIGHRSELCPSRI---LEKEDNPTDI-----ADSR 321
Query: 259 VPKESNISEFSQKPFIPVPVSQPNRSPGHGPWMLVDHSKR 295
+E + F GPWMLV KR
Sbjct: 322 AEEEEKLKNF-------------------GPWMLVSRRKR 334
BLAST of MS024016 vs. TAIR 10
Match:
AT2G01050.1 (zinc ion binding;nucleic acid binding )
HSP 1 Score: 142.5 bits (358), Expect = 7.1e-34
Identity = 65/195 (33.33%), Postives = 105/195 (53.85%), Query Frame = 0
Query: 35 VKFSKEQWKNFRALSRSALIIKVLGKSFGYPFLLRRLTAIWKLKGHFKLINLSNEFFIAR 94
+ +E + L + +I+KVLG L R+L +WK G +++L +FF+ R
Sbjct: 63 ITIGEEVLEAMNGLWKKCMIVKVLGSQIPISVLNRKLRELWKPSGVMTVMDLPRQFFMIR 122
Query: 95 LDLKEDRDRVLMEGPWKILDHYLAVRSWSPKFRPSTVTIDRAALWVRIPDCPMELYNETG 154
+L+E+ L GPW++L +YL V+ WS +F P I +WVR+ + P Y+
Sbjct: 123 FELEEEYMAALTGGPWRVLGNYLLVQDWSSRFDPLRDDIVTTPVWVRLSNIPYNYYHRCL 182
Query: 155 MKGIGHFIGKTLKIDFKTQSGKMGHFARIYVEVDLTKKPRRDFTILXERYGIQYEGIHLV 214
+ I +G+ LK+D T + G FAR+ +EV+L K + I +RY + YEG+ +
Sbjct: 183 LMEIARGLGRPLKVDMNTINFDKGRFARVCIEVNLAKPLKGTVLINGDRYFVAYEGLSKI 242
Query: 215 CFNCGVYGHKFEECP 230
C +CG+YGH CP
Sbjct: 243 CSSCGIYGHLVHSCP 257
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022153253.1 | 6.1e-88 | 88.33 | uncharacterized protein LOC111020790 [Momordica charantia] | [more] |
XP_034894450.1 | 1.3e-53 | 40.29 | uncharacterized protein LOC118033543 isoform X2 [Populus alba] | [more] |
XP_034894449.1 | 1.3e-53 | 40.29 | uncharacterized protein LOC118033543 isoform X1 [Populus alba] | [more] |
KAG6772677.1 | 1.3e-53 | 40.29 | hypothetical protein POTOM_024095 [Populus tomentosa] | [more] |
KAG6752401.1 | 1.3e-53 | 40.29 | hypothetical protein POTOM_044628 [Populus tomentosa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DGZ9 | 3.0e-88 | 88.33 | uncharacterized protein LOC111020790 OS=Momordica charantia OX=3673 GN=LOC111020... | [more] |
A0A6N2LZK8 | 7.6e-52 | 36.76 | CCHC-type domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS289... | [more] |
A0A2N9GMU3 | 3.3e-47 | 33.71 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28533 PE=4 SV=1 | [more] |
A0A1R3IXK3 | 5.7e-47 | 34.03 | Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_09149 PE=4 SV... | [more] |
A0A2N9HXU9 | 1.4e-45 | 37.14 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44383 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT2G01050.1 | 7.1e-34 | 33.33 | zinc ion binding;nucleic acid binding | [more] |