MS023971 (gene) Bitter gourd (TR) v1

Overview
NameMS023971
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF1218)
Locationscaffold44: 352041 .. 354423 (-)
RNA-Seq ExpressionMS023971
SyntenyMS023971
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGGAAGGCTGTGGCGGTCTGCTCTGTGGTTGCTTTTTTGGGGCTTTTGGTGGTCGCCACTGGATTCGCCGCTGAGGGCACGCGGATCAAGGTGAAGATGCTTCTTCTTTACTTAGATTTATGTTCGTTTTTCTGAGATTGATTGTCTGATATTTCTTCGGTTGATTTTCTGTTTGGTTGATGAGAAAATTTGTGTAAAAGAAAGTGAAGGAAAAGGTTGCTGAAAGTTGTGCTTATGAACAGAGATTTTTATGGTGTAATTTGAAGTTCTGATTGAAAAAAGTTGTTGGTGAATTAAAAACACAGATTTATGGCTTTGTTTTTTTTGGCCGCTTCTTTTTATCTTTACTTGTTTCCCAAGCTCTACTCTGAATCGATCTTCTTCTTCCTTTTTAATTTTTTTTTTTCTCATTTATATCAGAAAACAAATGAGAATACTGATTTGACTGATGTATTGGGGGAAATTATGTCAAATTTTGTTCTAATGTTTTTTTTTAATTAATTTATTTAATTAGCAATAATTGAGAATGCTGATTTGGATCAAATAAAGCAAATTATTTTTGCTTTTGTCTTTTTGTTTTTTCCTGCAAGTGATCCAAACTTCCAATTACATGCAAGTGATCCAAACTTCCAATTACATGCAAGTGATCCAAGTAATAACTAGAGTCGGTTTGATAATGATTTTGTTTTTTATTTTTTATTTTAAATAATTAAACAAATTTACTGATAATTTTGGTTAAAATATAGTCTTTGTTCTCTTAAACTTTCCTCATTTTAAATATGGTCCCTACAACTAAAAGAAAAGAAAAAGTTCGTTTAATCCCACACATTTTATTAAGTTACCAATTCTGTTCATGTCATTAAGAGAATTAAGCCTAACTGGTCTTATGATTATGAATCCCAACCTTTTTTTTTTAATCTTATCATTAGATGAGAACCTTGCAGTTTAGACTTAGTTTCTAATCTAATGATCTTAATCATCATTGGCTTTTTTCTTCTTTCCTTGATCTATGTTGATGTTGATTTCAAATTCTTCTGGATGAGAGACTCTGTTTCTAGGTGGTGTCCTTTAGTTGGGCTGTTTTTTTTTATGCCTCATATATTTTGTTCATTTCTCTAAATGAAATAGCGGTTTCTCATTAGAAAAAACATTTCTTTCGAATGCTACGATCCCACGGATAAAGTTTGATAAGTTGGCTTTTCATTTGGCAGCTTAGTCAAGTTATTCAAGTCACTCCTAATACGTGCACATATCCCCGAAGTCCAGCGTTGGGGCTTGGTTTGGCAGCAGCTCTATCACTTTTGGTTGCTCAGTTAACGATAAATGTTTCGACGGGTTGCATTTGTTGCATACGGGGGCCTCGGCCTCCCGCTTCTAAATGGAGAACAACCGTGGTCTGCTTTGTCATTTCCTGGTAATTTTCGGCCCTTTTCTCCTCATCAGAGTTTGCATTTAGTTGATGGTTTGATGCTTTCTATTACATCATGAGAGATATTATATGAATTTGGAGGAACCTTACTCTTGGTCGAATTGAAGGTTGCATTACTGTCAAATACTATCTGCTCTTGTATTGGGGTTGACTTAATTAGTTATTCGAATTCTCGTCAGGTTCTCTATGGTCTGAATTTCTGTTGTGACATTGTTCGTTATTACATAACCTTCTTTATGTTAGCTTTTAGACGGTTCCACTGTTTTTGTTCTCTGCATTGTTAAAATTATGAAAGTTATGACCGTTAGGTTTATCGAAAATCTTGGCCTGGAGAAGAGACTTCCCTAACCTTAATCATCACAGAGGAAAGGATTGAACCATTGTTCTTGGCAAAATCTTTTGATTGATTTAATCCAACAACTAAAAGAAAGATCGATACCTTAAGTTCCTTTCTTGAAATCGAATGAACAGAGATTTTCCTTGTACTGTGTACTCCTCCATTGTGGATTCGTGTTTGTGGGAAAACTCAAGTTTGAGGCTTTGAGCAACCAGATACTTCCTTCTCTGTACCATTAACTTAATTTCTTCTGCAGGTTTACGTTCATCATAGCGTTCCTCCTGTTGCTCACCGGTGCTGCGCTGAATGACCGACGCGGTGAAGAAAGCTACTATTTCGGTTACTACGAGTGCTACGTTCTGAAACCGGGGGTTTTTGCTGTCGCAACCATTTTGGCCGCTGCAAGTATAGTGCTGGGACTGTTCTATTACCTCATATTGAACTCTGCAAAAAATGATCCTACAGTGTGGGGCAATCCTTCAGTTCCTCCTCAAGCAAACATTGCAATGGGGCAGCCTCAATTCCCTCCCCCTCCTCCTCCTACTCAACAGAGATCTGGAGACCCCGTTTTCGTTCACGAAGACACGTATATGAGACGACAGTACACATGA

mRNA sequence

ATGGAGAGGAAGGCTGTGGCGGTCTGCTCTGTGGTTGCTTTTTTGGGGCTTTTGGTGGTCGCCACTGGATTCGCCGCTGAGGGCACGCGGATCAAGCTTAGTCAAGTTATTCAAGTCACTCCTAATACGTGCACATATCCCCGAAGTCCAGCGTTGGGGCTTGGTTTGGCAGCAGCTCTATCACTTTTGGTTGCTCAGTTAACGATAAATGTTTCGACGGGTTGCATTTGTTGCATACGGGGGCCTCGGCCTCCCGCTTCTAAATGGAGAACAACCGTGGTCTGCTTTGTCATTTCCTGGTTTACGTTCATCATAGCGTTCCTCCTGTTGCTCACCGGTGCTGCGCTGAATGACCGACGCGGTGAAGAAAGCTACTATTTCGGTTACTACGAGTGCTACGTTCTGAAACCGGGGGTTTTTGCTGTCGCAACCATTTTGGCCGCTGCAAGTATAGTGCTGGGACTGTTCTATTACCTCATATTGAACTCTGCAAAAAATGATCCTACAGTGTGGGGCAATCCTTCAGTTCCTCCTCAAGCAAACATTGCAATGGGGCAGCCTCAATTCCCTCCCCCTCCTCCTCCTACTCAACAGAGATCTGGAGACCCCGTTTTCGTTCACGAAGACACGTATATGAGACGACAGTACACATGA

Coding sequence (CDS)

ATGGAGAGGAAGGCTGTGGCGGTCTGCTCTGTGGTTGCTTTTTTGGGGCTTTTGGTGGTCGCCACTGGATTCGCCGCTGAGGGCACGCGGATCAAGCTTAGTCAAGTTATTCAAGTCACTCCTAATACGTGCACATATCCCCGAAGTCCAGCGTTGGGGCTTGGTTTGGCAGCAGCTCTATCACTTTTGGTTGCTCAGTTAACGATAAATGTTTCGACGGGTTGCATTTGTTGCATACGGGGGCCTCGGCCTCCCGCTTCTAAATGGAGAACAACCGTGGTCTGCTTTGTCATTTCCTGGTTTACGTTCATCATAGCGTTCCTCCTGTTGCTCACCGGTGCTGCGCTGAATGACCGACGCGGTGAAGAAAGCTACTATTTCGGTTACTACGAGTGCTACGTTCTGAAACCGGGGGTTTTTGCTGTCGCAACCATTTTGGCCGCTGCAAGTATAGTGCTGGGACTGTTCTATTACCTCATATTGAACTCTGCAAAAAATGATCCTACAGTGTGGGGCAATCCTTCAGTTCCTCCTCAAGCAAACATTGCAATGGGGCAGCCTCAATTCCCTCCCCCTCCTCCTCCTACTCAACAGAGATCTGGAGACCCCGTTTTCGTTCACGAAGACACGTATATGAGACGACAGTACACATGA

Protein sequence

MERKAVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAALSLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRRGEESYYFGYYECYVLKPGVFAVATILAAASIVLGLFYYLILNSAKNDPTVWGNPSVPPQANIAMGQPQFPPPPPPTQQRSGDPVFVHEDTYMRRQYT
Homology
BLAST of MS023971 vs. NCBI nr
Match: XP_022140830.1 (uncharacterized protein LOC111011403 [Momordica charantia])

HSP 1 Score: 421.4 bits (1082), Expect = 4.7e-114
Identity = 214/217 (98.62%), Postives = 215/217 (99.08%), Query Frame = 0

Query: 1   MERKAVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAAL 60
           MERKAVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAAL
Sbjct: 1   MERKAVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAAL 60

Query: 61  SLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRR 120
           SLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRR
Sbjct: 61  SLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRR 120

Query: 121 GEESYYFGYYECYVLKPGVFAVATILAAASIVLGLFYYLILNSAKNDPTVWGNPSVPPQA 180
           GEESYYFGYYECYVLKPGVFAVATILA ASIVLGLFYYLILNSAKN+PTVWGNPSVPPQA
Sbjct: 121 GEESYYFGYYECYVLKPGVFAVATILATASIVLGLFYYLILNSAKNNPTVWGNPSVPPQA 180

Query: 181 NIAMGQPQFPPPPPPTQQRSGDPVFVHEDTYMRRQYT 218
           NIAMGQPQFPPPPPP QQRSGDPVFVHEDTYMRRQYT
Sbjct: 181 NIAMGQPQFPPPPPP-QQRSGDPVFVHEDTYMRRQYT 216

BLAST of MS023971 vs. NCBI nr
Match: KAG7014863.1 (hypothetical protein SDJN02_22493 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 353.6 bits (906), Expect = 1.2e-93
Identity = 174/217 (80.18%), Postives = 191/217 (88.02%), Query Frame = 0

Query: 1   MERKAVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAAL 60
           MERKA+AVCSVVAFLGLL+VATGFAAEGTR+K +QV+QVTP  C YP+SPA  LGL AAL
Sbjct: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60

Query: 61  SLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRR 120
           SLL+AQ+ INVSTGCICC RGPRPPASKWRT VVCFV+SWFTF+IAFLLLLTGAALND R
Sbjct: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120

Query: 121 GEESYYFGYYECYVLKPGVFAVATILAAASIVLGLFYYLILNSAKNDPTVWGNPSVPPQA 180
            E+S YF YY CYVLKPGVFAVAT++ AAS+ LGLFYYLILNSAKNDP VWGNPS+PP A
Sbjct: 121 NEQSSYFNYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180

Query: 181 NIAMGQPQFPPPPPPTQQRSGDPVFVHEDTYMRRQYT 218
           NIAM QPQF PPPPP Q  + DPVFVHEDTY RRQ+T
Sbjct: 181 NIAMAQPQF-PPPPPAQPTTADPVFVHEDTYTRRQFT 216

BLAST of MS023971 vs. NCBI nr
Match: KAG6576843.1 (Protein MODIFYING WALL LIGNIN-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 353.6 bits (906), Expect = 1.2e-93
Identity = 174/217 (80.18%), Postives = 191/217 (88.02%), Query Frame = 0

Query: 1   MERKAVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAAL 60
           MERKA+AVCSVVAFLGLL+VATGFAAEGTR+K +QV+QVTP  C YP+SPA  LGL AAL
Sbjct: 83  MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 142

Query: 61  SLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRR 120
           SLL+AQ+ INVSTGCICC RGPRPPASKWRT VVCFV+SWFTF+IAFLLLLTGAALND R
Sbjct: 143 SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 202

Query: 121 GEESYYFGYYECYVLKPGVFAVATILAAASIVLGLFYYLILNSAKNDPTVWGNPSVPPQA 180
            E+S YF YY CYVLKPGVFAVAT++ AAS+ LGLFYYLILNSAKNDP VWGNPS+PP A
Sbjct: 203 NEQSSYFNYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 262

Query: 181 NIAMGQPQFPPPPPPTQQRSGDPVFVHEDTYMRRQYT 218
           NIAM QPQF PPPPP Q  + DPVFVHEDTY RRQ+T
Sbjct: 263 NIAMAQPQF-PPPPPAQPTTADPVFVHEDTYTRRQFT 298

BLAST of MS023971 vs. NCBI nr
Match: XP_022922463.1 (uncharacterized protein LOC111430466 [Cucurbita moschata])

HSP 1 Score: 353.2 bits (905), Expect = 1.6e-93
Identity = 174/217 (80.18%), Postives = 191/217 (88.02%), Query Frame = 0

Query: 1   MERKAVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAAL 60
           MERKA+AVCSVVAFLGLL+VATGFAAEGTR+K +QV+QVTP  C YP+SPA  LGL AAL
Sbjct: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60

Query: 61  SLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRR 120
           SLL+AQ+ INVSTGCICC RGPRPPASKWRT VVCFV+SWFTF+IAFLLLLTGAALND R
Sbjct: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120

Query: 121 GEESYYFGYYECYVLKPGVFAVATILAAASIVLGLFYYLILNSAKNDPTVWGNPSVPPQA 180
            E+S YF YY CYVLKPGVFAVAT++ AAS+ LGLFYYLILNSAKNDP VWGNPS+PP A
Sbjct: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180

Query: 181 NIAMGQPQFPPPPPPTQQRSGDPVFVHEDTYMRRQYT 218
           NIAM QPQF PPPPP Q  + DPVFVHEDTY RRQ+T
Sbjct: 181 NIAMAQPQF-PPPPPAQPTTADPVFVHEDTYTRRQFT 216

BLAST of MS023971 vs. NCBI nr
Match: XP_023551924.1 (uncharacterized protein LOC111809750 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 348.2 bits (892), Expect = 5.1e-92
Identity = 172/217 (79.26%), Postives = 189/217 (87.10%), Query Frame = 0

Query: 1   MERKAVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAAL 60
           MERKA+AVCSVVA LGLL+VATGFAAEGTR+K +QV+QVTP  C YP+SPA  LGL AAL
Sbjct: 1   MERKALAVCSVVAILGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60

Query: 61  SLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRR 120
           SLL+AQ+ INVSTGCICC RGPRPPASKWRT VVCFV+SWFTF+IAFLLLLTGAALN  R
Sbjct: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNGGR 120

Query: 121 GEESYYFGYYECYVLKPGVFAVATILAAASIVLGLFYYLILNSAKNDPTVWGNPSVPPQA 180
            E+S YF YY CYVLKPGVFAVAT++ AAS+ LGLFYYLILNSAKNDP VWGNPS+PP A
Sbjct: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180

Query: 181 NIAMGQPQFPPPPPPTQQRSGDPVFVHEDTYMRRQYT 218
           NIAM QPQF PPPPP Q  + DPVFVHEDTY RRQ+T
Sbjct: 181 NIAMAQPQF-PPPPPAQPTTADPVFVHEDTYTRRQFT 216

BLAST of MS023971 vs. ExPASy Swiss-Prot
Match: A2RVU1 (Protein MODIFYING WALL LIGNIN-1 OS=Arabidopsis thaliana OX=3702 GN=MWL1 PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-07
Identity = 45/125 (36.00%), Postives = 69/125 (55.20%), Query Frame = 0

Query: 43  TCTYPRSPALGLGLAAALSLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVI---S 102
           +C  P + A GLG+AA + + VAQ+  NV    IC  RG      K RTT+ C ++   S
Sbjct: 43  SCYLPENRAFGLGIAALVCVSVAQIVGNV---VIC--RG-FTKTDKTRTTIFCIILLLFS 102

Query: 103 WFTFIIAFLLLLTGAALNDRRGEESYYFGYY--ECYVLKPGVFAVATILAAASI--VLGL 161
           W  F +A  L+  GA++N    E+ Y  G+   ECY++K GVFA +  L+  ++  +LG 
Sbjct: 103 WVNFAVAVTLISVGASMN---REQIYGKGWLNRECYLVKDGVFAASGFLSVTTMAAILGA 158

BLAST of MS023971 vs. ExPASy Swiss-Prot
Match: O65708 (Protein MODIFYING WALL LIGNIN-2 OS=Arabidopsis thaliana OX=3702 GN=MWL2 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.0e-06
Identity = 50/151 (33.11%), Postives = 72/151 (47.68%), Query Frame = 0

Query: 10  SVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAALSLLVAQLTI 69
           SVV  LGL+   T FAAE  R +   +   T   C  P S A GLG AA L   +AQ+  
Sbjct: 8   SVVFSLGLVSFITCFAAEFKRTQKEDIRWDTERNCYVPGSHAFGLGSAAVLCFCLAQIVG 67

Query: 70  NVSTGCICCIRGPRPPASK---WRTTVVCFVISWFTFIIAFLLLLTGAALNDRRGEESYY 129
           N+        R  R    K        V  ++SW  F++  L+L T  +++     ++Y 
Sbjct: 68  NIVVFRNHRTRTKREDGYKITDLTLPTVLLLLSWSNFVVVVLILSTAISMS---RAQAYG 127

Query: 130 FGYY--ECYVLKPGVFAVATILAAASIVLGL 156
            G+   +CY++K GVFA +  LA    +LGL
Sbjct: 128 EGWLDEDCYLVKDGVFAASGCLA----ILGL 151

BLAST of MS023971 vs. ExPASy TrEMBL
Match: A0A6J1CG96 (uncharacterized protein LOC111011403 OS=Momordica charantia OX=3673 GN=LOC111011403 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.3e-114
Identity = 214/217 (98.62%), Postives = 215/217 (99.08%), Query Frame = 0

Query: 1   MERKAVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAAL 60
           MERKAVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAAL
Sbjct: 1   MERKAVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAAL 60

Query: 61  SLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRR 120
           SLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRR
Sbjct: 61  SLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRR 120

Query: 121 GEESYYFGYYECYVLKPGVFAVATILAAASIVLGLFYYLILNSAKNDPTVWGNPSVPPQA 180
           GEESYYFGYYECYVLKPGVFAVATILA ASIVLGLFYYLILNSAKN+PTVWGNPSVPPQA
Sbjct: 121 GEESYYFGYYECYVLKPGVFAVATILATASIVLGLFYYLILNSAKNNPTVWGNPSVPPQA 180

Query: 181 NIAMGQPQFPPPPPPTQQRSGDPVFVHEDTYMRRQYT 218
           NIAMGQPQFPPPPPP QQRSGDPVFVHEDTYMRRQYT
Sbjct: 181 NIAMGQPQFPPPPPP-QQRSGDPVFVHEDTYMRRQYT 216

BLAST of MS023971 vs. ExPASy TrEMBL
Match: A0A6J1E6P1 (uncharacterized protein LOC111430466 OS=Cucurbita moschata OX=3662 GN=LOC111430466 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 7.7e-94
Identity = 174/217 (80.18%), Postives = 191/217 (88.02%), Query Frame = 0

Query: 1   MERKAVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAAL 60
           MERKA+AVCSVVAFLGLL+VATGFAAEGTR+K +QV+QVTP  C YP+SPA  LGL AAL
Sbjct: 1   MERKALAVCSVVAFLGLLLVATGFAAEGTRVKGNQVVQVTPTMCKYPQSPAAALGLTAAL 60

Query: 61  SLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRR 120
           SLL+AQ+ INVSTGCICC RGPRPPASKWRT VVCFV+SWFTF+IAFLLLLTGAALND R
Sbjct: 61  SLLLAQILINVSTGCICCTRGPRPPASKWRTAVVCFVVSWFTFVIAFLLLLTGAALNDGR 120

Query: 121 GEESYYFGYYECYVLKPGVFAVATILAAASIVLGLFYYLILNSAKNDPTVWGNPSVPPQA 180
            E+S YF YY CYVLKPGVFAVAT++ AAS+ LGLFYYLILNSAKNDP VWGNPS+PP A
Sbjct: 121 NEQSSYFDYYYCYVLKPGVFAVATVVGAASLALGLFYYLILNSAKNDPNVWGNPSIPPPA 180

Query: 181 NIAMGQPQFPPPPPPTQQRSGDPVFVHEDTYMRRQYT 218
           NIAM QPQF PPPPP Q  + DPVFVHEDTY RRQ+T
Sbjct: 181 NIAMAQPQF-PPPPPAQPTTADPVFVHEDTYTRRQFT 216

BLAST of MS023971 vs. ExPASy TrEMBL
Match: A0A0A0KU80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025740 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.7e-81
Identity = 158/219 (72.15%), Postives = 182/219 (83.11%), Query Frame = 0

Query: 1   MERK-AVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAA 60
           MERK A+ V  VVA LG++++ATGFAAE TR K +QV +V P+ C YPRSPALGLGL AA
Sbjct: 1   MERKSALMVKYVVAILGIVMIATGFAAEATRTKRNQVTKVAPDLCKYPRSPALGLGLTAA 60

Query: 61  LSLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDR 120
           LSLL AQ+TI  STGC+CCIRGPRPPASKWRT V+CF ISW T++IAFLL LTGAALN+ 
Sbjct: 61  LSLLFAQITIKASTGCVCCIRGPRPPASKWRTAVICFTISWVTYVIAFLLFLTGAALNNG 120

Query: 121 RGEESYYFGYYECYVLKPGVFAVATILAAASIVLGLFYYLILNSAKNDP-TVWGNPSVPP 180
           RGE+  YF  Y+CYVLKPGVF+ ATI+  AS+ LG+ Y+LILNSAKNDP TVWG+PSVPP
Sbjct: 121 RGEQRNYFRDYDCYVLKPGVFSFATIVGMASLTLGMSYFLILNSAKNDPSTVWGHPSVPP 180

Query: 181 QANIAMGQPQFPPPPPPTQQRSGDPVFVHEDTYMRRQYT 218
           Q NIAM QPQFP PPPP  QR+ DPVFVHEDTYMRRQ+T
Sbjct: 181 QPNIAMAQPQFPNPPPP-PQRTADPVFVHEDTYMRRQFT 218

BLAST of MS023971 vs. ExPASy TrEMBL
Match: A0A5D3D069 (DUF1218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00200 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 7.0e-79
Identity = 154/220 (70.00%), Postives = 178/220 (80.91%), Query Frame = 0

Query: 1   MERKAVAVCS-VVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAA 60
           MERKA  V   VVAFLG++++ATGFAAE TR K  QV +V P+ C YPRSPA+GLG  AA
Sbjct: 1   MERKAALVVKFVVAFLGIVMIATGFAAEATRTKGKQVTRVAPDVCKYPRSPAMGLGFTAA 60

Query: 61  LSLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDR 120
           LSLL AQ+TI  STGC+CCIRGPRPP  KWRT V+CF +SW T++IAFLL LTGAALN+ 
Sbjct: 61  LSLLFAQITIKASTGCVCCIRGPRPP--KWRTAVICFTVSWITYVIAFLLFLTGAALNNG 120

Query: 121 RGEESYYFGYYECYVLKPGVFAVATILAAASIVLGLFYYLILNSAKNDP-TVWGNPSVPP 180
           R ++  Y G YECYVLKPGVF+ ATI+  AS+ LG+ Y+LILNSAKNDP TVWG+PSVPP
Sbjct: 121 RDQQRNYLGNYECYVLKPGVFSFATIVGVASLTLGMSYFLILNSAKNDPSTVWGHPSVPP 180

Query: 181 QANIAMGQPQFP-PPPPPTQQRSGDPVFVHEDTYMRRQYT 218
           Q NIAM QPQFP PPPPP  QR+ DPVFVHEDTYMRRQ+T
Sbjct: 181 QPNIAMAQPQFPNPPPPPPPQRTTDPVFVHEDTYMRRQFT 218

BLAST of MS023971 vs. ExPASy TrEMBL
Match: A0A1S3BX72 (uncharacterized protein LOC103494435 OS=Cucumis melo OX=3656 GN=LOC103494435 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 7.0e-79
Identity = 154/220 (70.00%), Postives = 178/220 (80.91%), Query Frame = 0

Query: 1   MERKAVAVCS-VVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNTCTYPRSPALGLGLAAA 60
           MERKA  V   VVAFLG++++ATGFAAE TR K  QV +V P+ C YPRSPA+GLG  AA
Sbjct: 1   MERKAALVVKFVVAFLGIVMIATGFAAEATRTKGKQVTRVAPDVCKYPRSPAMGLGFTAA 60

Query: 61  LSLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDR 120
           LSLL AQ+TI  STGC+CCIRGPRPP  KWRT V+CF +SW T++IAFLL LTGAALN+ 
Sbjct: 61  LSLLFAQITIKASTGCVCCIRGPRPP--KWRTAVICFTVSWITYVIAFLLFLTGAALNNG 120

Query: 121 RGEESYYFGYYECYVLKPGVFAVATILAAASIVLGLFYYLILNSAKNDP-TVWGNPSVPP 180
           R ++  Y G YECYVLKPGVF+ ATI+  AS+ LG+ Y+LILNSAKNDP TVWG+PSVPP
Sbjct: 121 RDQQRNYLGNYECYVLKPGVFSFATIVGVASLTLGMSYFLILNSAKNDPSTVWGHPSVPP 180

Query: 181 QANIAMGQPQFP-PPPPPTQQRSGDPVFVHEDTYMRRQYT 218
           Q NIAM QPQFP PPPPP  QR+ DPVFVHEDTYMRRQ+T
Sbjct: 181 QPNIAMAQPQFPNPPPPPPPQRTTDPVFVHEDTYMRRQFT 218

BLAST of MS023971 vs. TAIR 10
Match: AT5G17210.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 213.4 bits (542), Expect = 1.8e-55
Identity = 112/220 (50.91%), Postives = 143/220 (65.00%), Query Frame = 0

Query: 1   MERKAVAVCSVVAFLGLLVVATGFAAEGTRIKLSQVIQVTPNT---CTYPRSPALGLGLA 60
           MER+ + +C V+  LGLL   T F AE TRIK SQV     ++   CTYPRSPA  LG  
Sbjct: 1   MERRKIVMCGVLFLLGLLSAVTAFVAEATRIKRSQVTVTVSDSITKCTYPRSPAFNLGFT 60

Query: 61  AALSLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALN 120
           +AL L++AQ+ ++VS+GC CC +GP P  S W  +++CFV+SWFTF+IAFL+LL+GAALN
Sbjct: 61  SALFLMMAQIIVSVSSGCFCCRKGPAPSRSNWIISLICFVVSWFTFVIAFLVLLSGAALN 120

Query: 121 DRRGEESYYFGYYECYVLKPGVFAVATILAAASIVLGLFYYLILNSAKNDPTVWGNPSVP 180
           D   EES   G Y CY++KPGVF+   +L+  +I LG+ YYL L S K         +  
Sbjct: 121 DEHTEESMNAGTYFCYIVKPGVFSTGAVLSLVTIALGIVYYLCLTSNKQIVAA----TTT 180

Query: 181 PQANIAMGQPQFPPPPPPTQQRSGDPVFVHEDTYMRRQYT 218
               IAMGQPQ P       +R  DPVFVHEDTYMRRQ+T
Sbjct: 181 QGTGIAMGQPQIP-------ERVEDPVFVHEDTYMRRQFT 209

BLAST of MS023971 vs. TAIR 10
Match: AT5G17210.2 (Protein of unknown function (DUF1218) )

HSP 1 Score: 184.5 bits (467), Expect = 9.1e-47
Identity = 92/174 (52.87%), Postives = 117/174 (67.24%), Query Frame = 0

Query: 44  CTYPRSPALGLGLAAALSLLVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTF 103
           CTYPRSPA  LG  +AL L++AQ+ ++VS+GC CC +GP P  S W  +++CFV+SWFTF
Sbjct: 13  CTYPRSPAFNLGFTSALFLMMAQIIVSVSSGCFCCRKGPAPSRSNWIISLICFVVSWFTF 72

Query: 104 IIAFLLLLTGAALNDRRGEESYYFGYYECYVLKPGVFAVATILAAASIVLGLFYYLILNS 163
           +IAFL+LL+GAALND   EES   G Y CY++KPGVF+   +L+  +I LG+ YYL L S
Sbjct: 73  VIAFLVLLSGAALNDEHTEESMNAGTYFCYIVKPGVFSTGAVLSLVTIALGIVYYLCLTS 132

Query: 164 AKNDPTVWGNPSVPPQANIAMGQPQFPPPPPPTQQRSGDPVFVHEDTYMRRQYT 218
            K         +      IAMGQPQ P       +R  DPVFVHEDTYMRRQ+T
Sbjct: 133 NKQIVAA----TTTQGTGIAMGQPQIP-------ERVEDPVFVHEDTYMRRQFT 175

BLAST of MS023971 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 61.6 bits (148), Expect = 8.9e-10
Identity = 48/166 (28.92%), Postives = 81/166 (48.80%), Query Frame = 0

Query: 12  VAFLGLLVVATGFA-AEGTRIKLSQVIQ--VTPNT-CTYPRSPALGLGLAAALSLLVAQL 71
           +  + L +VA GF+ A   R  + + IQ  +T  T C Y    A G G+ A L LL ++ 
Sbjct: 12  ILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLFLLSSES 71

Query: 72  TINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRRGEESYYF 131
            +   T C+C  R P  P S    +++ F+ SW TF++A   ++ GA  N      +Y+ 
Sbjct: 72  LLMSVTKCMCFGR-PLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKN------AYHT 131

Query: 132 GY-----YECYVLKPGVFAVATILAAASIVLGLFYYLILNSAKNDP 169
            Y     + C  L+ G+F    +   A++VL ++YY+    + + P
Sbjct: 132 KYLSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKSVSSP 170

BLAST of MS023971 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-09
Identity = 47/167 (28.14%), Postives = 74/167 (44.31%), Query Frame = 0

Query: 8   VCSVVAFLGLLVVATGFAAEGTR--IKLSQVIQVTPNTCTYPRSPALGLGLAAALSLLVA 67
           V ++V    L+      AAE  R   ++ Q  +V  N C Y    A G G+ A L  + +
Sbjct: 6   VSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFSVAS 65

Query: 68  QLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALNDRRGEESY 127
           Q+ I + + C CC + P  P       ++ F++SW  F+IA + LL G+       E +Y
Sbjct: 66  QILIMLVSRCFCCGK-PLKPGGSRALALILFIVSWMFFLIAEICLLAGSV------ENAY 125

Query: 128 YFGYY--------ECYVLKPGVFAVATILAAASIVLGLFYYLILNSA 165
           +  Y         +C  L+ GVFA        + ++  FYY    SA
Sbjct: 126 HTKYRTMFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSA 165

BLAST of MS023971 vs. TAIR 10
Match: AT1G68220.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 52.8 bits (125), Expect = 4.1e-07
Identity = 61/197 (30.96%), Postives = 83/197 (42.13%), Query Frame = 0

Query: 5   AVAVCSVVAFLGLLVVATGFAAEGTRIKLSQV-IQVTPNT-CTYPRSPALGLGLAAALSL 64
           +V++ +VV  L LL     F AE  R     V  Q    T C Y    +   G++A   L
Sbjct: 4   SVSILTVVTALHLLAFVFAFGAERRRSTAVPVPDQYDEKTICKYGTEASTVYGMSAFGLL 63

Query: 65  LVAQLTINVSTGCICCIRGPRPPASKWRTTVVCFVISWFTFIIAFLLLLTGAALN--DRR 124
           LV+Q  +N  T C+C  +G     S     +V FV+SW +F+ A   LL G+A N    +
Sbjct: 64  LVSQAVVNGVTKCLCFGKGLVTGTSYTVWAIVFFVVSWVSFLGAEACLLGGSARNAYHTK 123

Query: 125 GEESYYFGYYECYVLKPGVFAVATILAAASIVLGLFYYLILNSAKNDPTVWGNPSVPPQA 184
            E  Y      C VL  GVFA        S++  + YYL    +K D   W         
Sbjct: 124 SEGIYKGKELSCAVLPVGVFAAGAAFTLMSLIATILYYLA--HSKADTGGW-EKHQNDGI 183

Query: 185 NIAMGQPQFPPPPPPTQ 198
           NI M  P   P    T+
Sbjct: 184 NIGMTTPSDAPKQQNTE 197

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022140830.14.7e-11498.62uncharacterized protein LOC111011403 [Momordica charantia][more]
KAG7014863.11.2e-9380.18hypothetical protein SDJN02_22493 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6576843.11.2e-9380.18Protein MODIFYING WALL LIGNIN-2, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022922463.11.6e-9380.18uncharacterized protein LOC111430466 [Cucurbita moschata][more]
XP_023551924.15.1e-9279.26uncharacterized protein LOC111809750 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
A2RVU11.4e-0736.00Protein MODIFYING WALL LIGNIN-1 OS=Arabidopsis thaliana OX=3702 GN=MWL1 PE=1 SV=... [more]
O657082.0e-0633.11Protein MODIFYING WALL LIGNIN-2 OS=Arabidopsis thaliana OX=3702 GN=MWL2 PE=2 SV=... [more]
Match NameE-valueIdentityDescription
A0A6J1CG962.3e-11498.62uncharacterized protein LOC111011403 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A6J1E6P17.7e-9480.18uncharacterized protein LOC111430466 OS=Cucurbita moschata OX=3662 GN=LOC1114304... [more]
A0A0A0KU805.7e-8172.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025740 PE=4 SV=1[more]
A0A5D3D0697.0e-7970.00DUF1218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3BX727.0e-7970.00uncharacterized protein LOC103494435 OS=Cucumis melo OX=3656 GN=LOC103494435 PE=... [more]
Match NameE-valueIdentityDescription
AT5G17210.11.8e-5550.91Protein of unknown function (DUF1218) [more]
AT5G17210.29.1e-4752.87Protein of unknown function (DUF1218) [more]
AT1G13380.18.9e-1028.92Protein of unknown function (DUF1218) [more]
AT4G27435.11.2e-0928.14Protein of unknown function (DUF1218) [more]
AT1G68220.14.1e-0730.96Protein of unknown function (DUF1218) [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009606Modifying wall lignin-1/2PFAMPF06749DUF1218coord: 58..151
e-value: 1.2E-25
score: 89.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..203
NoneNo IPR availablePANTHERPTHR31769:SF59PROTEIN, PUTATIVE (DUF1218)-RELATEDcoord: 1..196
NoneNo IPR availablePANTHERPTHR31769OS07G0462200 PROTEIN-RELATEDcoord: 1..196

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS023971.1MS023971.1mRNA