MS023850 (gene) Bitter gourd (TR) v1

Overview


Name	MS023850
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	PSI-G
Location	scaffold368: 236305 .. 236769 (+)
RNA-Seq Expression	MS023850
Synteny	MS023850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCGCCGCCGCCTCTTCCGCCGTGTTCGCCTCCCCAGCGCTCTCCGCGCGCGCCCCCTCCAACATGAAATCCTTCCAAGGCCTCCGCCCGCTCCCGGCTGTGAAATCGAGCGGCCGCCTCACAGCCGCCGTGAAGAGCCGGAGATCCACCGCGGTGAGGGCGGAGCTGAACCCGTCTCTGGTGATAAGCCTGAGCACAGGGATGTCCCTGTTTCTGGGGAGGTTCGTATTCTTCAACTTCCAGAGGGAGAACGTCAGCAAACAGGGGCTGCCCGAGCAGAACGGGCAGAGCCATTTCGAGGCAGGGGATGTAAGGGCCAAGGAGTACGTCAGCCTCCTCAAATCTAACGACCCAGTTGGGTTCAATATCGTGGACGTTCTGGCCTGGGGATCCATTGGTCACATCGTGGCTTACTACATCTTGGCCACGTCAAGCAATGGCTACGATCCCAAGTTCTTC

mRNA sequence

ATGGCCGCCGCCGCCGCCTCTTCCGCCGTGTTCGCCTCCCCAGCGCTCTCCGCGCGCGCCCCCTCCAACATGAAATCCTTCCAAGGCCTCCGCCCGCTCCCGGCTGTGAAATCGAGCGGCCGCCTCACAGCCGCCGTGAAGAGCCGGAGATCCACCGCGGTGAGGGCGGAGCTGAACCCGTCTCTGGTGATAAGCCTGAGCACAGGGATGTCCCTGTTTCTGGGGAGGTTCGTATTCTTCAACTTCCAGAGGGAGAACGTCAGCAAACAGGGGCTGCCCGAGCAGAACGGGCAGAGCCATTTCGAGGCAGGGGATGTAAGGGCCAAGGAGTACGTCAGCCTCCTCAAATCTAACGACCCAGTTGGGTTCAATATCGTGGACGTTCTGGCCTGGGGATCCATTGGTCACATCGTGGCTTACTACATCTTGGCCACGTCAAGCAATGGCTACGATCCCAAGTTCTTC

Coding sequence (CDS)

ATGGCCGCCGCCGCCGCCTCTTCCGCCGTGTTCGCCTCCCCAGCGCTCTCCGCGCGCGCCCCCTCCAACATGAAATCCTTCCAAGGCCTCCGCCCGCTCCCGGCTGTGAAATCGAGCGGCCGCCTCACAGCCGCCGTGAAGAGCCGGAGATCCACCGCGGTGAGGGCGGAGCTGAACCCGTCTCTGGTGATAAGCCTGAGCACAGGGATGTCCCTGTTTCTGGGGAGGTTCGTATTCTTCAACTTCCAGAGGGAGAACGTCAGCAAACAGGGGCTGCCCGAGCAGAACGGGCAGAGCCATTTCGAGGCAGGGGATGTAAGGGCCAAGGAGTACGTCAGCCTCCTCAAATCTAACGACCCAGTTGGGTTCAATATCGTGGACGTTCTGGCCTGGGGATCCATTGGTCACATCGTGGCTTACTACATCTTGGCCACGTCAAGCAATGGCTACGATCCCAAGTTCTTC

Protein sequence

MAAAAASSAVFASPALSARAPSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF

Homology

[Close]

BLAST of MS023850 vs. NCBI nr
Match: XP_022158865.1 (photosystem I reaction center subunit V, chloroplastic [Momordica charantia])

HSP 1 Score: 284.3 bits (726), Expect = 6.5e-73
Identity = 150/153 (98.04%), Postives = 150/153 (98.04%), Query Frame = 0


Query: 3   AAAASSAVFASPALSARAPSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSL 62
           A A SSAVFASPALSARAPSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSL
Sbjct: 2   ATAVSSAVFASPALSARAPSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSL 61

Query: 63  VISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFEAGDVRAKEYVSLLKSNDPVG 122
           VISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQ HFEAGDVRAKEYVSLLKSNDPVG
Sbjct: 62  VISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQCHFEAGDVRAKEYVSLLKSNDPVG 121

Query: 123 FNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 156
           FNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 122 FNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 154

[Close]

BLAST of MS023850 vs. NCBI nr
Match: XP_038903014.1 (photosystem I reaction center subunit V, chloroplastic [Benincasa hispida])

HSP 1 Score: 228.4 bits (581), Expect = 4.2e-56
Identity = 128/160 (80.00%), Postives = 137/160 (85.62%), Query Frame = 0


Query: 1   MAAAAASSAVFASPALSARAPSNMK-----SFQGLRPLPAVKSSGRLTAAVKSRRSTAVR 60
           MA AA+SSA+FA+P  SA A          SFQGLR LP+VKSS R   A+KSRRS  V+
Sbjct: 1   MATAASSSAIFAAPTFSAAATRQQPTPTAVSFQGLRALPSVKSS-RPGVAIKSRRSVVVK 60

Query: 61  AELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFEAGDVRAKEYVSLL 120
           AELNPSLVISLSTG+SLFLGRFVFFNFQRENVSKQ +PEQNG +HFEAGDVRAKEYVSLL
Sbjct: 61  AELNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGLTHFEAGDVRAKEYVSLL 120

Query: 121 KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 156
           KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of MS023850 vs. NCBI nr
Match: XP_004149569.1 (photosystem I reaction center subunit V, chloroplastic [Cucumis sativus] >KGN56044.1 hypothetical protein Csa_010215 [Cucumis sativus])

HSP 1 Score: 228.4 bits (581), Expect = 4.2e-56
Identity = 129/160 (80.62%), Postives = 136/160 (85.00%), Query Frame = 0


Query: 1   MAAAAASSAVFASPALSARAPSNMK-----SFQGLRPLPAVKSSGRLTAAVKSRRSTAVR 60
           MAAAA+SSAVFA+P  SA A          SFQGLR LP+VKSS R   A KSRRS  V+
Sbjct: 1   MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSS-RSVVATKSRRSMTVK 60

Query: 61  AELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFEAGDVRAKEYVSLL 120
           AELNPSLVISLSTG+SLFLGRFVFFNFQRENV KQ +PEQNG +HFEAGDVRAKEYVSLL
Sbjct: 61  AELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQ-VPEQNGLTHFEAGDVRAKEYVSLL 120

Query: 121 KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 156
           KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of MS023850 vs. NCBI nr
Match: XP_022934047.1 (photosystem I reaction center subunit V, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 225.3 bits (573), Expect = 3.6e-55
Identity = 128/161 (79.50%), Postives = 139/161 (86.34%), Query Frame = 0


Query: 1   MAAAAASSAVFASPALSARA------PSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAV 60
           MAAAA+SSAVFA+ + SA        PS + S+QGLRPLP +KSS R  A VKS RS  V
Sbjct: 1   MAAAASSSAVFAASSFSASVGRQQPNPSTI-SYQGLRPLPGIKSS-RSLAGVKSPRSVVV 60

Query: 61  RAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFEAGDVRAKEYVSL 120
           +AELNPS+VISLSTG+SLFLGRFVFFNFQRENVSKQ +PEQNG +HFEAGDVRAKEYVSL
Sbjct: 61  KAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGVTHFEAGDVRAKEYVSL 120

Query: 121 LKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 156
           LKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 LKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of MS023850 vs. NCBI nr
Match: XP_023005588.1 (photosystem I reaction center subunit V, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 224.9 bits (572), Expect = 4.7e-55
Identity = 128/161 (79.50%), Postives = 139/161 (86.34%), Query Frame = 0


Query: 1   MAAAAASSAVFASPALSARA------PSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAV 60
           MAA A+SSAVFA+ + SA        PS + S+QGLRPLP +KSS R  AAVKS RS  V
Sbjct: 1   MAAVASSSAVFAASSFSAAVRRQQPNPSTI-SYQGLRPLPGIKSS-RSLAAVKSPRSLVV 60

Query: 61  RAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFEAGDVRAKEYVSL 120
           +AELNPS+VISLSTG+SLFLGRFVFFNFQRENVSKQ +PEQNG +HFEAGDVRAKEYVSL
Sbjct: 61  KAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGVTHFEAGDVRAKEYVSL 120

Query: 121 LKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 156
           LKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 LKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of MS023850 vs. ExPASy Swiss-Prot
Match: Q9S7N7 (Photosystem I reaction center subunit V, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAG PE=1 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 7.2e-51
Identity = 111/157 (70.70%), Postives = 128/157 (81.53%), Query Frame = 0


Query: 2   AAAAASSAVFASPALSARAPSNMKSFQGLRPLPAVKSSG---RLTAAVKSRRSTAVRAEL 61
           +A+A  S    S A+S + P+++ SF GLRPL    SS    +L+   +   S  VRAEL
Sbjct: 4   SASALLSPTTFSTAISHKNPNSI-SFHGLRPLRLGGSSSALPKLSTTGRKSSSAVVRAEL 63

Query: 62  NPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFEAGDVRAKEYVSLLKSN 121
           +PS+VISLSTG+SLFLGRFVFFNFQRENV+KQGLPEQNG++HFEAGD RAKEYVSLLKSN
Sbjct: 64  SPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLLKSN 123

Query: 122 DPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 156
           DP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Sbjct: 124 DPIGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFF 159

[Close]

BLAST of MS023850 vs. ExPASy Swiss-Prot
Match: P12357 (Photosystem I reaction center subunit V, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAG PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.0e-48
Identity = 112/168 (66.67%), Postives = 126/168 (75.00%), Query Frame = 0


Query: 1   MAAAAASSAVFASPALSARAPS----------NMKSFQGLRPLPAVKSSGRLTAAV---K 60
           MAAA AS +       S++ P             KSF GLRPL    SS   ++++    
Sbjct: 1   MAAATASLSSTLLAPCSSKQPQPQQQHQHQQLKCKSFSGLRPLKLNISSNNSSSSLSMSS 60

Query: 61  SRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFEAGDVR 120
           +RRS   RAEL+PSLVISLSTG+SLFLGRFVFFNFQREN++KQ +PEQNG SHFEAGD R
Sbjct: 61  ARRSMTCRAELSPSLVISLSTGLSLFLGRFVFFNFQRENMAKQ-VPEQNGMSHFEAGDTR 120

Query: 121 AKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 156
           AKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT+SNGYDP FF
Sbjct: 121 AKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATASNGYDPSFF 167

[Close]

BLAST of MS023850 vs. ExPASy Swiss-Prot
Match: Q00327 (Photosystem I reaction center subunit V, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAG PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.5e-43
Identity = 97/156 (62.18%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 4   AAASSAVFASPALS----ARAPSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELN 63
           A +++AV + PA++    A +P    SF+G+ P               +RRS A RA L 
Sbjct: 2   ATSTAAVLSPPAVAGLRLAPSPRAAASFRGVSP--------------PARRSVAARAALE 61

Query: 64  PSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFEAGDVRAKEYVSLLKSND 123
           PS+VISLSTG+SL +GRFVFFNFQRENV+KQ +PEQNG++HFEAGD RAKE+  +LKSND
Sbjct: 62  PSVVISLSTGLSLVMGRFVFFNFQRENVAKQ-VPEQNGKTHFEAGDERAKEFAGILKSND 121

Query: 124 PVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 156
           PVGFN+VDVLAWGSIGHIVAYYILAT+SNGYDP FF
Sbjct: 122 PVGFNLVDVLAWGSIGHIVAYYILATTSNGYDPPFF 142

[Close]

BLAST of MS023850 vs. ExPASy Swiss-Prot
Match: Q9SPM4 (Photosystem I reaction center subunit V, chloroplastic OS=Syntrichia ruralis OX=38588 GN=PSAG PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.6e-21
Identity = 54/110 (49.09%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 42  LTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHF 101
           +TA  KS          N S +IS ST   L LGRFVF  FQR  VS+ GLPEQNG    
Sbjct: 1   MTAIAKSAAKVTCDG-ANTSFIISASTAALLALGRFVFLPFQRSMVSRHGLPEQNGVPTT 60

Query: 102 EAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYD 152
                  + + S+LK+NDP GF +VDVLAWG++GH V ++ILAT++NGY+
Sbjct: 61  RRVTAVRRRWWSMLKTNDPAGFTLVDVLAWGALGHAVGFFILATATNGYN 109

[Close]

BLAST of MS023850 vs. ExPASy Swiss-Prot
Match: P14224 (Photosystem I reaction center subunit V, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=PSAG PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-13
Identity = 44/122 (36.07%), Postives = 70/122 (57.38%), Query Frame = 0


Query: 28  QGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSLVISLSTGMSLFLGRFVFFNFQRE-- 87
           Q L   P++++S R+      R +   +A L+P +VIS ST   L +GRFVF  +QR   
Sbjct: 2   QTLASRPSLRASARVAPRRAPRVAVVTKAALDPQIVISGSTAAFLAIGRFVFLGYQRREA 61

Query: 88  NVSKQGLPEQNGQSHFEAGDVRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILAT 147
           N      P+  G ++F+  D++     ++  +NDP GFNI+DV  WG++GH V + +LA 
Sbjct: 62  NFDSTVGPKTTGATYFD--DLQKNS--TIFATNDPAGFNIIDVAGWGALGHAVGFAVLAI 119

[Close]

BLAST of MS023850 vs. ExPASy TrEMBL
Match: A0A6J1DX19 (PSI-G OS=Momordica charantia OX=3673 GN=LOC111025327 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.1e-73
Identity = 150/153 (98.04%), Postives = 150/153 (98.04%), Query Frame = 0


Query: 3   AAAASSAVFASPALSARAPSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSL 62
           A A SSAVFASPALSARAPSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSL
Sbjct: 2   ATAVSSAVFASPALSARAPSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAELNPSL 61

Query: 63  VISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFEAGDVRAKEYVSLLKSNDPVG 122
           VISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQ HFEAGDVRAKEYVSLLKSNDPVG
Sbjct: 62  VISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQCHFEAGDVRAKEYVSLLKSNDPVG 121

Query: 123 FNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 156
           FNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 122 FNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 154

[Close]

BLAST of MS023850 vs. ExPASy TrEMBL
Match: A0A0A0L4W3 (PSI-G OS=Cucumis sativus OX=3659 GN=Csa_3G060980 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 2.0e-56
Identity = 129/160 (80.62%), Postives = 136/160 (85.00%), Query Frame = 0


Query: 1   MAAAAASSAVFASPALSARAPSNMK-----SFQGLRPLPAVKSSGRLTAAVKSRRSTAVR 60
           MAAAA+SSAVFA+P  SA A          SFQGLR LP+VKSS R   A KSRRS  V+
Sbjct: 1   MAAAASSSAVFAAPTFSATATRQQPNPTTISFQGLRALPSVKSS-RSVVATKSRRSMTVK 60

Query: 61  AELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFEAGDVRAKEYVSLL 120
           AELNPSLVISLSTG+SLFLGRFVFFNFQRENV KQ +PEQNG +HFEAGDVRAKEYVSLL
Sbjct: 61  AELNPSLVISLSTGLSLFLGRFVFFNFQRENVGKQ-VPEQNGLTHFEAGDVRAKEYVSLL 120

Query: 121 KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 156
           KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of MS023850 vs. ExPASy TrEMBL
Match: A0A6J1F1K2 (PSI-G OS=Cucurbita moschata OX=3662 GN=LOC111441287 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.7e-55
Identity = 128/161 (79.50%), Postives = 139/161 (86.34%), Query Frame = 0


Query: 1   MAAAAASSAVFASPALSARA------PSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAV 60
           MAAAA+SSAVFA+ + SA        PS + S+QGLRPLP +KSS R  A VKS RS  V
Sbjct: 1   MAAAASSSAVFAASSFSASVGRQQPNPSTI-SYQGLRPLPGIKSS-RSLAGVKSPRSVVV 60

Query: 61  RAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFEAGDVRAKEYVSL 120
           +AELNPS+VISLSTG+SLFLGRFVFFNFQRENVSKQ +PEQNG +HFEAGDVRAKEYVSL
Sbjct: 61  KAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGVTHFEAGDVRAKEYVSL 120

Query: 121 LKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 156
           LKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 LKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of MS023850 vs. ExPASy TrEMBL
Match: A0A6J1L2L3 (PSI-G OS=Cucurbita maxima OX=3661 GN=LOC111498528 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.3e-55
Identity = 128/161 (79.50%), Postives = 139/161 (86.34%), Query Frame = 0


Query: 1   MAAAAASSAVFASPALSARA------PSNMKSFQGLRPLPAVKSSGRLTAAVKSRRSTAV 60
           MAA A+SSAVFA+ + SA        PS + S+QGLRPLP +KSS R  AAVKS RS  V
Sbjct: 1   MAAVASSSAVFAASSFSAAVRRQQPNPSTI-SYQGLRPLPGIKSS-RSLAAVKSPRSLVV 60

Query: 61  RAELNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFEAGDVRAKEYVSL 120
           +AELNPS+VISLSTG+SLFLGRFVFFNFQRENVSKQ +PEQNG +HFEAGDVRAKEYVSL
Sbjct: 61  KAELNPSVVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGVTHFEAGDVRAKEYVSL 120

Query: 121 LKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 156
           LKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 121 LKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 158

[Close]

BLAST of MS023850 vs. ExPASy TrEMBL
Match: A0A5D3CPR0 (PSI-G OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00430 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.8e-55
Identity = 126/158 (79.75%), Postives = 134/158 (84.81%), Query Frame = 0


Query: 3   AAAASSAVFASPALSARAPSNMK-----SFQGLRPLPAVKSSGRLTAAVKSRRSTAVRAE 62
           AAA+SSAVF +P  SA A          SFQGLR LP+VKSS R   A K+RRS  V+AE
Sbjct: 2   AAASSSAVFVAPTFSATATRQQPSPTTISFQGLRALPSVKSS-RSIVATKTRRSMTVKAE 61

Query: 63  LNPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFEAGDVRAKEYVSLLKS 122
           LNPSLVISLSTG+SLFLGRFVFFNFQRENVSKQ +PEQNG +HFEAGDVRAKEYVSLLKS
Sbjct: 62  LNPSLVISLSTGLSLFLGRFVFFNFQRENVSKQ-VPEQNGLTHFEAGDVRAKEYVSLLKS 121

Query: 123 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 156
           NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF
Sbjct: 122 NDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 157

[Close]

BLAST of MS023850 vs. TAIR 10
Match: AT1G55670.1 (photosystem I subunit G )

HSP 1 Score: 201.4 bits (511), Expect = 5.1e-52
Identity = 111/157 (70.70%), Postives = 128/157 (81.53%), Query Frame = 0


Query: 2   AAAAASSAVFASPALSARAPSNMKSFQGLRPLPAVKSSG---RLTAAVKSRRSTAVRAEL 61
           +A+A  S    S A+S + P+++ SF GLRPL    SS    +L+   +   S  VRAEL
Sbjct: 4   SASALLSPTTFSTAISHKNPNSI-SFHGLRPLRLGGSSSALPKLSTTGRKSSSAVVRAEL 63

Query: 62  NPSLVISLSTGMSLFLGRFVFFNFQRENVSKQGLPEQNGQSHFEAGDVRAKEYVSLLKSN 121
           +PS+VISLSTG+SLFLGRFVFFNFQRENV+KQGLPEQNG++HFEAGD RAKEYVSLLKSN
Sbjct: 64  SPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLLKSN 123

Query: 122 DPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 156
           DP+GFNIVDVLAWGSIGHIVAYYILATSSNGYDP FF
Sbjct: 124 DPIGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFF 159

The following BLAST results are available for this feature:

BLAST of MS023850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158865.1	6.5e-73	98.04	photosystem I reaction center subunit V, chloroplastic [Momordica charantia]	[more]
XP_038903014.1	4.2e-56	80.00	photosystem I reaction center subunit V, chloroplastic [Benincasa hispida]	[more]
XP_004149569.1	4.2e-56	80.63	photosystem I reaction center subunit V, chloroplastic [Cucumis sativus] >KGN560...	[more]
XP_022934047.1	3.6e-55	79.50	photosystem I reaction center subunit V, chloroplastic-like [Cucurbita moschata]	[more]
XP_023005588.1	4.7e-55	79.50	photosystem I reaction center subunit V, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of MS023850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7N7	7.2e-51	70.70	Photosystem I reaction center subunit V, chloroplastic OS=Arabidopsis thaliana O...	[more]
P12357	2.0e-48	66.67	Photosystem I reaction center subunit V, chloroplastic OS=Spinacia oleracea OX=3...	[more]
Q00327	1.5e-43	62.18	Photosystem I reaction center subunit V, chloroplastic OS=Hordeum vulgare OX=451...	[more]
Q9SPM4	4.6e-21	49.09	Photosystem I reaction center subunit V, chloroplastic OS=Syntrichia ruralis OX=...	[more]
P14224	2.1e-13	36.07	Photosystem I reaction center subunit V, chloroplastic OS=Chlamydomonas reinhard...	[more]

BLAST of MS023850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DX19	3.1e-73	98.04	PSI-G OS=Momordica charantia OX=3673 GN=LOC111025327 PE=3 SV=1	[more]
A0A0A0L4W3	2.0e-56	80.63	PSI-G OS=Cucumis sativus OX=3659 GN=Csa_3G060980 PE=3 SV=1	[more]
A0A6J1F1K2	1.7e-55	79.50	PSI-G OS=Cucurbita moschata OX=3662 GN=LOC111441287 PE=3 SV=1	[more]
A0A6J1L2L3	2.3e-55	79.50	PSI-G OS=Cucurbita maxima OX=3661 GN=LOC111498528 PE=3 SV=1	[more]
A0A5D3CPR0	3.8e-55	79.75	PSI-G OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00430 PE=3 SV=...	[more]

BLAST of MS023850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55670.1	5.1e-52	70.70	photosystem I subunit G	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000549	Photosystem I PsaG/PsaK protein	PFAM	PF01241	PSI_PSAK	coord: 60..150 e-value: 7.5E-22 score: 77.1
IPR000549	Photosystem I PsaG/PsaK protein	PROSITE	PS01026	PHOTOSYSTEM_I_PSAGK	coord: 122..139
IPR017494	Photosystem I PsaG, plant	TIGRFAM	TIGR03051	TIGR03051	coord: 63..151 e-value: 6.2E-44 score: 146.4
IPR016370	Photosystem I PsaG/PsaK, plant	PIRSF	PIRSF002912	PsaK	coord: 1..155 e-value: 1.6E-65 score: 217.6
IPR016370	Photosystem I PsaG/PsaK, plant	PANTHER	PTHR34195	PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC-RELATED	coord: 7..155
IPR023618	Photosystem I PsaG/PsaK domain, chloroplastic	GENE3D	1.10.286.40		coord: 60..155 e-value: 2.1E-47 score: 161.5
None	No IPR available	PANTHER	PTHR34195:SF1	PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC	coord: 7..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023850.1	MS023850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0016020	membrane
cellular_component	GO:0009522	photosystem I