MS023727 (gene) Bitter gourd (TR) v1

Overview


Name	MS023727
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 .
Location	scaffold570: 569330 .. 569959 (+)
RNA-Seq Expression	MS023727
Synteny	MS023727

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGGCAAAGAAAAGCTTGAAGCTTTTGAAGCTATGGAGTTGAGGGAACTCAGTTGGGTAATCATGAAAAGTGGAGAAGATGAAGTTTGTGAAGCTTCTATCTCCACCATGGATTCTTCTTCGGAGAACTCGATCAGCTCAATTGAATCTTTTTCATCGGAATTGGCTGAAGATGCATCATCTTCTTCTACTTCAAACCCTTCATTATCGTCATTCTCGCCGTTATCATCGTCGAGTGGACCTCTCTATGAGCTCTCAGAGCTGATGGCCAATCTCCCCATCAAGTAAGAAGATAACGTAAACCCTAAGAATCTTGTTTATTAAAGAAAAATAATGATAATCAAAATAATTAACCCTTTTACTTTGGCTTTTTGTAGGAGAGGGCTATCCAAATTCTATAATGGGAAATCACAATCTTTTACATCTCTAGCAAGTGCAAAGAGCTTGGAAGATCTTGCAAAGAGAGTGAATAATAATATTATTATTCCTCAAAGGAAAAAGATGAAGTGTTGTAAAAGCTATGGAGGAGGGTTAGATGCTCAAAGATCTTATTCTCCAAAGGCTTCCATTGCTAAAAAACCTTCAAAGGCAGTTTGTAAGAGAAATAATAGGTTATTTGACAGCCAT

mRNA sequence

ATGGGAGGCAAAGAAAAGCTTGAAGCTTTTGAAGCTATGGAGTTGAGGGAACTCAGTTGGGTAATCATGAAAAGTGGAGAAGATGAAGTTTGTGAAGCTTCTATCTCCACCATGGATTCTTCTTCGGAGAACTCGATCAGCTCAATTGAATCTTTTTCATCGGAATTGGCTGAAGATGCATCATCTTCTTCTACTTCAAACCCTTCATTATCGTCATTCTCGCCGTTATCATCGTCGAGTGGACCTCTCTATGAGCTCTCAGAGCTGATGGCCAATCTCCCCATCAAGAGAGGGCTATCCAAATTCTATAATGGGAAATCACAATCTTTTACATCTCTAGCAAGTGCAAAGAGCTTGGAAGATCTTGCAAAGAGAGTGAATAATAATATTATTATTCCTCAAAGGAAAAAGATGAAGTGTTGTAAAAGCTATGGAGGAGGGTTAGATGCTCAAAGATCTTATTCTCCAAAGGCTTCCATTGCTAAAAAACCTTCAAAGGCAGTTTGTAAGAGAAATAATAGGTTATTTGACAGCCAT

Coding sequence (CDS)

ATGGGAGGCAAAGAAAAGCTTGAAGCTTTTGAAGCTATGGAGTTGAGGGAACTCAGTTGGGTAATCATGAAAAGTGGAGAAGATGAAGTTTGTGAAGCTTCTATCTCCACCATGGATTCTTCTTCGGAGAACTCGATCAGCTCAATTGAATCTTTTTCATCGGAATTGGCTGAAGATGCATCATCTTCTTCTACTTCAAACCCTTCATTATCGTCATTCTCGCCGTTATCATCGTCGAGTGGACCTCTCTATGAGCTCTCAGAGCTGATGGCCAATCTCCCCATCAAGAGAGGGCTATCCAAATTCTATAATGGGAAATCACAATCTTTTACATCTCTAGCAAGTGCAAAGAGCTTGGAAGATCTTGCAAAGAGAGTGAATAATAATATTATTATTCCTCAAAGGAAAAAGATGAAGTGTTGTAAAAGCTATGGAGGAGGGTTAGATGCTCAAAGATCTTATTCTCCAAAGGCTTCCATTGCTAAAAAACCTTCAAAGGCAGTTTGTAAGAGAAATAATAGGTTATTTGACAGCCAT

Protein sequence

MGGKEKLEAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKSLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH

Homology

[Close]

BLAST of MS023727 vs. NCBI nr
Match: XP_022154740.1 (uncharacterized protein LOC111021921 [Momordica charantia])

HSP 1 Score: 327.4 bits (838), Expect = 7.7e-86
Identity = 178/179 (99.44%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MGGKEKLEAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDA 60
           +GGKEKLEAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDA
Sbjct: 3   IGGKEKLEAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDA 62

Query: 61  SSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKSLE 120
           SSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKSLE
Sbjct: 63  SSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKSLE 122

Query: 121 DLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH 180
           DLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH
Sbjct: 123 DLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH 181

[Close]

BLAST of MS023727 vs. NCBI nr
Match: XP_022937494.1 (uncharacterized protein LOC111443888 isoform X1 [Cucurbita moschata] >XP_022937495.1 uncharacterized protein LOC111443888 isoform X1 [Cucurbita moschata])

HSP 1 Score: 221.5 bits (563), Expect = 5.9e-54
Identity = 139/183 (75.96%), Postives = 151/183 (82.51%), Query Frame = 0


Query: 1   MGGKEKLEAFE---AMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELA 60
           MGGK+ +EAFE   AMEL+ELS V++++ ED+VCEASIST     ENSISS ESFSSEL 
Sbjct: 3   MGGKDMIEAFEAYKAMELQELSLVMVETREDDVCEASIST-----ENSISSFESFSSELL 62

Query: 61  EDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAK 120
           EDASS+STSN SLSS S  S SSGPLYELSELM NLPIKRGLSKFYNGKSQSFTSLASAK
Sbjct: 63  EDASSTSTSNLSLSSLSS-SQSSGPLYELSELMDNLPIKRGLSKFYNGKSQSFTSLASAK 122

Query: 121 SLEDLAKRV-NNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLF 180
           SLEDLAK+V NNN I  Q+KKMKCCKSYGGGLDAQRSYSPK  IAKK S    KR +RLF
Sbjct: 123 SLEDLAKKVNNNNNITSQKKKMKCCKSYGGGLDAQRSYSPKPLIAKKAS----KRRSRLF 175

[Close]

BLAST of MS023727 vs. NCBI nr
Match: XP_038890684.1 (uncharacterized protein LOC120080185 [Benincasa hispida])

HSP 1 Score: 221.5 bits (563), Expect = 5.9e-54
Identity = 142/186 (76.34%), Postives = 152/186 (81.72%), Query Frame = 0


Query: 1   MGGKEKLEAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDA 60
           MGGKEK+EAFEAMEL EL+WVIM++ E EV EAS ST+ SSSENSI+SIES SSEL EDA
Sbjct: 1   MGGKEKMEAFEAMELTELNWVIMETRESEVFEASTSTIGSSSENSINSIESLSSELLEDA 60

Query: 61  SSSS-TSNPSLSSFSP-LSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKS 120
           SSSS  SN S  S SP LSSS GPLYELSELMANLPIKRGLSKFYNGKSQSFTSLAS KS
Sbjct: 61  SSSSFASNLSSLSLSPSLSSSDGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASVKS 120

Query: 121 LEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRS-YSPKASIAKKPSKA-----VCKRN 178
           LEDLAKRVNNN  I QRKKMK CKSYGGGLDAQ+  YSPK  I+K+ SK      + KRN
Sbjct: 121 LEDLAKRVNNN--ISQRKKMKSCKSYGGGLDAQKPYYSPKPLISKRVSKGSLLSPISKRN 180

[Close]

BLAST of MS023727 vs. NCBI nr
Match: XP_022965955.1 (uncharacterized protein LOC111465679 [Cucurbita maxima])

HSP 1 Score: 221.5 bits (563), Expect = 5.9e-54
Identity = 137/182 (75.27%), Postives = 151/182 (82.97%), Query Frame = 0


Query: 1   MGGKEKLEAF---EAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELA 60
           MGGK+ +EAF   EA+EL+ELS V++++ ED+VCEASIST     ENSISS ESFSSEL 
Sbjct: 24  MGGKQMIEAFQPYEALELQELSLVMVETREDDVCEASIST-----ENSISSFESFSSELL 83

Query: 61  EDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAK 120
           EDASS+STS+ SLSS S  S SSGPLYELSELMANLPIKRGLSKFYNGKSQSFTS+ASAK
Sbjct: 84  EDASSTSTSSLSLSSLSS-SQSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSVASAK 143

Query: 121 SLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFD 180
           SLEDLAK+VNNN I  QRKKMK CKSYGGGLDAQRSYSPK  IAKK S    KR +RLF 
Sbjct: 144 SLEDLAKKVNNNNITSQRKKMKSCKSYGGGLDAQRSYSPKPLIAKKAS----KRRSRLFV 195

[Close]

BLAST of MS023727 vs. NCBI nr
Match: KAG7021310.1 (hypothetical protein SDJN02_17999, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 219.2 bits (557), Expect = 2.9e-53
Identity = 137/183 (74.86%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MGGKEKL---EAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELA 60
           MGGK+ +   EA++AMEL+ELS V++++ ED+VCEASIST     ENSISS ESFSSEL 
Sbjct: 3   MGGKDMIVAFEAYKAMELQELSLVMVETREDDVCEASIST-----ENSISSFESFSSELL 62

Query: 61  EDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAK 120
           EDASS+STS+ SLSS S  S SSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAK
Sbjct: 63  EDASSTSTSSLSLSSLSS-SQSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAK 122

Query: 121 SLEDLAKRV-NNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLF 180
           SLEDLAK+V NNN I  Q+KKMKCCKSYGGGLDAQRSYSPK  IAKK S    KR +RLF
Sbjct: 123 SLEDLAKKVNNNNNITSQKKKMKCCKSYGGGLDAQRSYSPKPLIAKKAS----KRRSRLF 175

[Close]

BLAST of MS023727 vs. ExPASy TrEMBL
Match: A0A6J1DKH4 (uncharacterized protein LOC111021921 OS=Momordica charantia OX=3673 GN=LOC111021921 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.7e-86
Identity = 178/179 (99.44%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MGGKEKLEAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDA 60
           +GGKEKLEAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDA
Sbjct: 3   IGGKEKLEAFEAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDA 62

Query: 61  SSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKSLE 120
           SSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKSLE
Sbjct: 63  SSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAKSLE 122

Query: 121 DLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH 180
           DLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH
Sbjct: 123 DLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFDSH 181

[Close]

BLAST of MS023727 vs. ExPASy TrEMBL
Match: A0A6J1FBB9 (uncharacterized protein LOC111443888 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443888 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.9e-54
Identity = 139/183 (75.96%), Postives = 151/183 (82.51%), Query Frame = 0


Query: 1   MGGKEKLEAFE---AMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELA 60
           MGGK+ +EAFE   AMEL+ELS V++++ ED+VCEASIST     ENSISS ESFSSEL 
Sbjct: 3   MGGKDMIEAFEAYKAMELQELSLVMVETREDDVCEASIST-----ENSISSFESFSSELL 62

Query: 61  EDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAK 120
           EDASS+STSN SLSS S  S SSGPLYELSELM NLPIKRGLSKFYNGKSQSFTSLASAK
Sbjct: 63  EDASSTSTSNLSLSSLSS-SQSSGPLYELSELMDNLPIKRGLSKFYNGKSQSFTSLASAK 122

Query: 121 SLEDLAKRV-NNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLF 180
           SLEDLAK+V NNN I  Q+KKMKCCKSYGGGLDAQRSYSPK  IAKK S    KR +RLF
Sbjct: 123 SLEDLAKKVNNNNNITSQKKKMKCCKSYGGGLDAQRSYSPKPLIAKKAS----KRRSRLF 175

[Close]

BLAST of MS023727 vs. ExPASy TrEMBL
Match: A0A6J1HQ75 (uncharacterized protein LOC111465679 OS=Cucurbita maxima OX=3661 GN=LOC111465679 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.9e-54
Identity = 137/182 (75.27%), Postives = 151/182 (82.97%), Query Frame = 0


Query: 1   MGGKEKLEAF---EAMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELA 60
           MGGK+ +EAF   EA+EL+ELS V++++ ED+VCEASIST     ENSISS ESFSSEL 
Sbjct: 24  MGGKQMIEAFQPYEALELQELSLVMVETREDDVCEASIST-----ENSISSFESFSSELL 83

Query: 61  EDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAK 120
           EDASS+STS+ SLSS S  S SSGPLYELSELMANLPIKRGLSKFYNGKSQSFTS+ASAK
Sbjct: 84  EDASSTSTSSLSLSSLSS-SQSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSVASAK 143

Query: 121 SLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFD 180
           SLEDLAK+VNNN I  QRKKMK CKSYGGGLDAQRSYSPK  IAKK S    KR +RLF 
Sbjct: 144 SLEDLAKKVNNNNITSQRKKMKSCKSYGGGLDAQRSYSPKPLIAKKAS----KRRSRLFV 195

[Close]

BLAST of MS023727 vs. ExPASy TrEMBL
Match: A0A6J1FAH9 (uncharacterized protein LOC111443888 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443888 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.5e-50
Identity = 134/182 (73.63%), Postives = 145/182 (79.67%), Query Frame = 0


Query: 1   MGGKEKLEAFE---AMELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELA 60
           MGGK+ +EAFE   AMEL+ELS V++++ ED+VCEASIST     ENSISS ESFSSEL 
Sbjct: 3   MGGKDMIEAFEAYKAMELQELSLVMVETREDDVCEASIST-----ENSISSFESFSSELL 62

Query: 61  EDASSSSTSNPSLSSFSPLSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLASAK 120
           EDASS+STSN SLSS S  S SSGPLYELSELM NLPIKRGLSKFYNGKSQSFTSLASAK
Sbjct: 63  EDASSTSTSNLSLSSLSS-SQSSGPLYELSELMDNLPIKRGLSKFYNGKSQSFTSLASAK 122

Query: 121 SLEDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNNRLFD 180
           SLEDLAK+V         KKMKCCKSYGGGLDAQRSYSPK  IAKK S    KR +RLF 
Sbjct: 123 SLEDLAKKV---------KKMKCCKSYGGGLDAQRSYSPKPLIAKKAS----KRRSRLFV 165

[Close]

BLAST of MS023727 vs. ExPASy TrEMBL
Match: A0A5A7V023 (Suppressor protein SRP40-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00630 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.7e-46
Identity = 141/195 (72.31%), Postives = 150/195 (76.92%), Query Frame = 0


Query: 1   MGGKEK-LEAFEAMELRELSWVIMKSGEDEVCEA-SISTMDSSSENSISSIESFSSELAE 60
           M GKE+ +E FEAMELREL+WVIM+S EDEV EA S ST+DSSS N   SIES +SEL E
Sbjct: 1   MEGKEQIIEDFEAMELRELNWVIMESREDEVLEAFSTSTIDSSSMN---SIESSASELLE 60

Query: 61  DASSSS-TSNPSLS-SFSPLSSSS--GPLYELSELMANLPIKRGLSKFYNGKSQSFTSLA 120
           DASSSS TSN S S S SP  SSS  GPLYELSELMANLPIKRGLSKFYNGKSQSFTSLA
Sbjct: 61  DASSSSLTSNFSSSLSLSPSLSSSDDGPLYELSELMANLPIKRGLSKFYNGKSQSFTSLA 120

Query: 121 SAKSLEDLAKRV---NNNIIIPQRKKMKCCKSYGGGLDAQRS---YSPKASIAKKPSK-- 177
           S KSLEDLAKRV   NNN    QRKKMKCCKSYGG LDAQ+S   +SPK  IAKK SK  
Sbjct: 121 SVKSLEDLAKRVNYNNNNYYNYQRKKMKCCKSYGGSLDAQKSSNYHSPKPLIAKKVSKPS 180

[Close]

BLAST of MS023727 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 )

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-16
Identity = 67/143 (46.85%), Postives = 86/143 (60.14%), Query Frame = 0


Query: 27  EDEVCEASISTMDSSSENSISSI-ESFSSELAEDASSSSTSNPSLSSFSPLSSSSGPLYE 86
           ED V E S +  D    +S  S+  S  S+  ED      S+         SSS+GPL +
Sbjct: 27  EDIVQEVSTTFSDEEDNSSSCSLSSSMCSDFTEDDDDDDVSS---------SSSNGPLED 86

Query: 87  LSELMANLPIKRGLSKFYNGKSQSFTSLASAKSLEDLAKRVNNNIIIPQRKKMKCCKSYG 146
           LS+LM++LPIKRGLSKFY GKSQSFTSL + KSLEDL KR   +       K K  +S G
Sbjct: 87  LSDLMSHLPIKRGLSKFYEGKSQSFTSLGNVKSLEDLMKRGFKS--RNYGAKRKSSRSTG 146

Query: 147 GGLDA--QRSYSPKASIAKKPSK 167
           G LD   +R +SPKA+I+KKP++
Sbjct: 147 GILDQSYKRVFSPKATISKKPNR 158

[Close]

BLAST of MS023727 vs. TAIR 10
Match: AT4G26288.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 (TAIR:AT5G56550.1); Has 289 Blast hits to 232 proteins in 41 species: Archae - 0; Bacteria - 12; Metazoa - 36; Fungi - 21; Plants - 151; Viruses - 2; Other Eukaryotes - 67 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 2.4e-13
Identity = 66/165 (40.00%), Postives = 91/165 (55.15%), Query Frame = 0


Query: 13  MELRELSWVIMKSGEDEVCEASISTMDSSSENSISSIESFSSELAEDASSSSTSNPSLSS 72
           M +R+ + +     E+ V   S S+   SS +SIS     SS+L EDASSSS+S+     
Sbjct: 1   MNIRDGNLISTTKEEEGVIGVSGSSAKVSSSSSISMC---SSDLTEDASSSSSSSS---- 60

Query: 73  FSPLSSSSGPLYELSELMANLPI----KRGLSKFYNGKSQSFTSLASAKSLEDLAKRVNN 132
               SSS+GP  +LS+L++ LPI    K GLSK+Y GKSQSFTSLA+  SL+DL KR + 
Sbjct: 61  ----SSSNGPFDDLSDLISQLPIIQVKKGGLSKYYKGKSQSFTSLANVTSLQDLVKRGS- 120

Query: 133 NIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCKRNN 174
                  +   CCK           Y PKA+I+ K ++   K +N
Sbjct: 121 -------RTKSCCK-------RDYFYGPKATISMKATRTSSKHSN 139

[Close]

BLAST of MS023727 vs. TAIR 10
Match: AT3G03170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 6.4e-06
Identity = 27/52 (51.92%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 96  KRGLSKFYNGKSQSFTSLASAKSLEDLAKRVNN-NIIIPQRKKMKCCKSYGG 147
           +RGLSK Y GKSQSFT+LA A ++EDLAK  N  N  + QR++   C+   G
Sbjct: 56  RRGLSKHYKGKSQSFTTLAEALTVEDLAKPENPFNAKLKQRRESPHCRRLSG 107

[Close]

BLAST of MS023727 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 7.1e-05
Identity = 48/128 (37.50%), Postives = 65/128 (50.78%), Query Frame = 0


Query: 62  SSSTSNPSLSSFSP---------LSSSSGPLYELSELMANLPIKRGLSKFYNGKSQSFTS 121
           SSSTS+ S+   S           SS +GPL  +  L   LPIKR +SKFY GKS+SF S
Sbjct: 22  SSSTSSDSIGENSDDDEGGENEIESSYNGPLDMMESLEEALPIKRAISKFYKGKSKSFMS 81

Query: 122 LASAKSL--EDLAKRVNNNIIIPQRKKMKCCKSYGGGLDAQRSYSPKASIAKKPSKAVCK 179
           L+   SL  +DL K  N   +  +R++          L + R  S +  I+KKP K+V  
Sbjct: 82  LSETSSLPVKDLTKPEN---LYSRRRR---------NLLSHRICS-RGGISKKPFKSVLA 136

The following BLAST results are available for this feature:

BLAST of MS023727 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154740.1	7.7e-86	99.44	uncharacterized protein LOC111021921 [Momordica charantia]	[more]
XP_022937494.1	5.9e-54	75.96	uncharacterized protein LOC111443888 isoform X1 [Cucurbita moschata] >XP_0229374...	[more]
XP_038890684.1	5.9e-54	76.34	uncharacterized protein LOC120080185 [Benincasa hispida]	[more]
XP_022965955.1	5.9e-54	75.27	uncharacterized protein LOC111465679 [Cucurbita maxima]	[more]
KAG7021310.1	2.9e-53	74.86	hypothetical protein SDJN02_17999, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of MS023727 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS023727 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DKH4	3.7e-86	99.44	uncharacterized protein LOC111021921 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1FBB9	2.9e-54	75.96	uncharacterized protein LOC111443888 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HQ75	2.9e-54	75.27	uncharacterized protein LOC111465679 OS=Cucurbita maxima OX=3661 GN=LOC111465679...	[more]
A0A6J1FAH9	1.5e-50	73.63	uncharacterized protein LOC111443888 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7V023	1.7e-46	72.31	Suppressor protein SRP40-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of MS023727 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56550.1	1.1e-16	46.85	oxidative stress 3	[more]
AT4G26288.1	2.4e-13	40.00	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT3G03170.1	6.4e-06	51.92	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G43850.1	7.1e-05	37.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..80
None	No IPR available	PANTHER	PTHR33172	OS08G0516900 PROTEIN	coord: 16..166
None	No IPR available	PANTHER	PTHR33172:SF45	EMB\|CAB83157.1	coord: 16..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023727.1	MS023727.1	mRNA