MS023706 (gene) Bitter gourd (TR) v1

Overview


Name	MS023706
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	tetraspanin-2
Location	scaffold570: 369971 .. 372560 (-)
RNA-Seq Expression	MS023706
Synteny	MS023706

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTAAGCAACAACATCACAGCAATTGTGAACTTCCTGGCTTTCCTCTGCTCCATACCCATAATTGGCGCCGGAATTTGGCTAGCTTCGAAGCCAGACAACGGATGCATCCACTTTTTCCGGTGGCCGGTGGTTCTCCTCGGCGTGCTCATCCTCCTCGTCTCGTTGGCCGGCTTCATCGGCGCGTACTGGAACAGGCAAGGCCTCTTGGCATTTTACCTCTTCTGTATGGCTCTACTGATCGGCCTTTTCCTCGTCCTGCTTGTCTTCACGTTCGTCGTCACGCGCCCCGACGGCAGCTACACCGTCATGGGCCGGGGATTCAAGGAGTACCGGCTCGACGGATTCTCATCCTGGCTTAAAAACCATCTCACCAATTCCGGAAATTGGCCGAAGATAAGGACGTGTCTGGCGGAATCCGATGTCTGTCCCAAGCTTAATCTGCAATACTTCGCCGCCGATCAGTTTTTCGCGGCGGACATCTCGCCTCTCCAGGTCAGCTCCTTCCTTCTTTACTTTACTATACTCATGGCGTATCGCTTTATTTTCTTACAAAAACTTTTATAAAAAGATGATTTTATCTTCTCTCTCTGTATTTTCTTGGAATATACTCCAAGGGTTTCTGTTTGAATTAAAGATTTCTGAAGGAGGAGAATTCCTTGCCATTTTAGAGACATCTTTTACAGAAATAGATCGCAGCTTTCTCCAATACACGTTTTAGCTTTTGGGATCGTAATCCTGGCCCCGTGGGTCGGTTGTTTAAAAATAAAGAAAAGTAAAAAGATAATAAAATTGTTTTAATCTTTTTATTTTTAAATGTTTGGTGGTTCTCATTTCATATCAGCTGGAATATTGCACTCCCATGTTTTTGTCCGTATTTTGAAAAAAGAAATAACATTGTAATTTAGAATTTTCGGATTTTTGTTTTTCAAGCCTTTGAATTTAAAAATATTTATTATCTCATTAAAAAAATTATATAAAACCACCCCATCTCTTATCTTTTCTCCAGCATTAGCATGTGACTTGTTGACATTGGGTGTCCCAAGTCCCAACGACTTTTGGGGTCAGGAATTCTCCGGTATTTAATGATGATTTTCCAAATATATTCTTTTTTAAACAATAGTTTCATTTGAAAATTTAATCATATCGTTGACCATTTTGAACACTTGACGTAAAAACTTGAGTCTTTATATCTATAATTTATGTCATTATTTCTAACTCGTTTGAAAATATTTAACAATTAAAGTGTAAAATGCAGAGAATAGGGGTGTGATTCAAAGTTTCACCTTTTGTTAGAATTCTGAAAAATCGTACAAATTTTATAAGTAATCAGAACATTCCCATGGGTAAAGTTAGGTAAACTGAGATATGAAACAGGAGAACCCATATCAATTGAGAAATGTAGTTTGGATGAAAGAAAAAGATTTTCCATAGTTCTTACTTTTAGACATTATCAAGGGGTGTACTTTATCTTATCTAGATGGGCTATTCTTTATTTTTCTTGGGTTCACTTCGTTGGAGCTAACGCTTCTGGTTCTGGCTCCATCTAAAAATATGAATATTTTAAAAAATGTGACTTTCAGGTGTGTAAGCGCTTAGATTTTGATTTCAGAATATCGTATGCTTAAATTTGAACTTTCAGAATATCATATTTTTAATTGTAAACTTTAGTTCTAACTTTCTTCTAAAGCCCTGGTTAAAGTGGGGCTCTTCAACATTTGTTTTGGTGGTTGTGGATGTGACCAACCACAGCCTTACTAGGACAAAGCAGGGGCCCAAATTTTGGTAAATTTTGTAAAAGAAGTGATTTGGTATAGCCTAATAAAATCTAGAAATCCCCCTTTTCATTGAGTGCCATTACAGATTTCATAATTCAAAAATAAAGTGGACAGCTCAGATATCATTGGGGACCCTTTGATTCCAAATCAATCAAATTCAAAATGGTTAAGATTGCAACAAAAAATGGTTGATATGGATGCCAGCTAACCAGTCCATTATGACTAATTGTTTAAGAACAAATTGGTCTCTGTTATGACTTTCCAACTCTGACTTTGCTCTTTTACACTCACTCATGACTCTGCCAGATCCAACTTAATTGGTCGTCCATCTAGTGTTTATTCGTAGGTCTGAATCCCTTCCCTCATTTACTTTGCTGAAGATCAGACATGTCGTCATGTCGATCAGGAATCAAATGCGTTACTATGAGTTGTAGGTTCGAAAATGTGGGTTGAAGTTGGAACTTGAAACTTACTTGGTTTTAACTGTGTATGTGGTGCAGTCAGGGTGCTGTAAACCTCCAACAGCCTGTGGGTATAACTTTGTGAACCCAACACTGTGGCTGAACCCTGGTGACCCAATGGCTGACCCAGACTGCTATCTTTGGAGCAATGACCAGACCCAGTTGTGCTACAATTGCAACTCTTGCAAAGCTGGTCTCCTGGGGAATCTCAGAAAAGAATGGAGGAGAGCAAATGTGGTTCTCATTGTCACCGTGGTGGTTCTGATTTGCGTCTATGTAATCGGCTGCAGCGCCTTCAAGAACGCACAGACCGAGGACCTCTTTCGTCGTTACAAACAGGGATGGATC

mRNA sequence

ATGGGTTTAAGCAACAACATCACAGCAATTGTGAACTTCCTGGCTTTCCTCTGCTCCATACCCATAATTGGCGCCGGAATTTGGCTAGCTTCGAAGCCAGACAACGGATGCATCCACTTTTTCCGGTGGCCGGTGGTTCTCCTCGGCGTGCTCATCCTCCTCGTCTCGTTGGCCGGCTTCATCGGCGCGTACTGGAACAGGCAAGGCCTCTTGGCATTTTACCTCTTCTGTATGGCTCTACTGATCGGCCTTTTCCTCGTCCTGCTTGTCTTCACGTTCGTCGTCACGCGCCCCGACGGCAGCTACACCGTCATGGGCCGGGGATTCAAGGAGTACCGGCTCGACGGATTCTCATCCTGGCTTAAAAACCATCTCACCAATTCCGGAAATTGGCCGAAGATAAGGACGTGTCTGGCGGAATCCGATGTCTGTCCCAAGCTTAATCTGCAATACTTCGCCGCCGATCAGTTTTTCGCGGCGGACATCTCGCCTCTCCAGTCAGGGTGCTGTAAACCTCCAACAGCCTGTGGGTATAACTTTGTGAACCCAACACTGTGGCTGAACCCTGGTGACCCAATGGCTGACCCAGACTGCTATCTTTGGAGCAATGACCAGACCCAGTTGTGCTACAATTGCAACTCTTGCAAAGCTGGTCTCCTGGGGAATCTCAGAAAAGAATGGAGGAGAGCAAATGTGGTTCTCATTGTCACCGTGGTGGTTCTGATTTGCGTCTATGTAATCGGCTGCAGCGCCTTCAAGAACGCACAGACCGAGGACCTCTTTCGTCGTTACAAACAGGGATGGATC

Coding sequence (CDS)

ATGGGTTTAAGCAACAACATCACAGCAATTGTGAACTTCCTGGCTTTCCTCTGCTCCATACCCATAATTGGCGCCGGAATTTGGCTAGCTTCGAAGCCAGACAACGGATGCATCCACTTTTTCCGGTGGCCGGTGGTTCTCCTCGGCGTGCTCATCCTCCTCGTCTCGTTGGCCGGCTTCATCGGCGCGTACTGGAACAGGCAAGGCCTCTTGGCATTTTACCTCTTCTGTATGGCTCTACTGATCGGCCTTTTCCTCGTCCTGCTTGTCTTCACGTTCGTCGTCACGCGCCCCGACGGCAGCTACACCGTCATGGGCCGGGGATTCAAGGAGTACCGGCTCGACGGATTCTCATCCTGGCTTAAAAACCATCTCACCAATTCCGGAAATTGGCCGAAGATAAGGACGTGTCTGGCGGAATCCGATGTCTGTCCCAAGCTTAATCTGCAATACTTCGCCGCCGATCAGTTTTTCGCGGCGGACATCTCGCCTCTCCAGTCAGGGTGCTGTAAACCTCCAACAGCCTGTGGGTATAACTTTGTGAACCCAACACTGTGGCTGAACCCTGGTGACCCAATGGCTGACCCAGACTGCTATCTTTGGAGCAATGACCAGACCCAGTTGTGCTACAATTGCAACTCTTGCAAAGCTGGTCTCCTGGGGAATCTCAGAAAAGAATGGAGGAGAGCAAATGTGGTTCTCATTGTCACCGTGGTGGTTCTGATTTGCGTCTATGTAATCGGCTGCAGCGCCTTCAAGAACGCACAGACCGAGGACCTCTTTCGTCGTTACAAACAGGGATGGATC

Protein sequence

MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGFIGAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSWLKNHLTNSGNWPKIRTCLAESDVCPKLNLQYFAADQFFAADISPLQSGCCKPPTACGYNFVNPTLWLNPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVVVLICVYVIGCSAFKNAQTEDLFRRYKQGWI

Homology

[Close]

BLAST of MS023706 vs. NCBI nr
Match: XP_022154738.1 (tetraspanin-2 [Momordica charantia] >XP_022154739.1 tetraspanin-2 [Momordica charantia])

HSP 1 Score: 567.0 bits (1460), Expect = 8.7e-158
Identity = 267/269 (99.26%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF
Sbjct: 1   MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           +GAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKE+RLDGFSSW
Sbjct: 61  VGAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEFRLDGFSSW 120

Query: 121 LKNHLTNSGNWPKIRTCLAESDVCPKLNLQYFAADQFFAADISPLQSGCCKPPTACGYNF 180
           LKNHLTNSGNWPKIRTCLAESDVCPKLNLQYFAADQFFAADISPLQSGCCKPPTACGYNF
Sbjct: 121 LKNHLTNSGNWPKIRTCLAESDVCPKLNLQYFAADQFFAADISPLQSGCCKPPTACGYNF 180

Query: 181 VNPTLWLNPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVVV 240
           VNPTLWLNPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVVV
Sbjct: 181 VNPTLWLNPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVVV 240

Query: 241 LICVYVIGCSAFKNAQTEDLFRRYKQGWI 270
           LICVYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LICVYVIGCSAFKNAQTEDLFRRYKQGWI 269

[Close]

BLAST of MS023706 vs. NCBI nr
Match: XP_038890423.1 (tetraspanin-2-like [Benincasa hispida])

HSP 1 Score: 542.7 bits (1397), Expect = 1.7e-150
Identity = 256/269 (95.17%), Postives = 262/269 (97.40%), Query Frame = 0


Query: 1   MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           MGLSNNITAI+NFLA LCSIPIIGAGIWLASKPDN CIHFFRWPVVLLGVLILLVSLAGF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLLGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMALLI L +VLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMALLIALLIVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LKNHLTNSGNWPKIRTCLAESDVCPKLNLQYFAADQFFAADISPLQSGCCKPPTACGYNF 180
           LKNHLTNS NWPKIRTCLAESDVCPKLN +YFAADQFFAADISPLQSGCCKPPTACGYNF
Sbjct: 121 LKNHLTNSRNWPKIRTCLAESDVCPKLNQRYFAADQFFAADISPLQSGCCKPPTACGYNF 180

Query: 181 VNPTLWLNPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVVV 240
           VNPTLWLNPGDPMADPDCY+WSNDQTQLCYNCNSCKAGLLGNLR+EWR+ANVVLIVTVVV
Sbjct: 181 VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240

Query: 241 LICVYVIGCSAFKNAQTEDLFRRYKQGWI 270
           LI VYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

[Close]

BLAST of MS023706 vs. NCBI nr
Match: XP_004141051.1 (tetraspanin-2 [Cucumis sativus] >KGN60543.1 hypothetical protein Csa_019435 [Cucumis sativus])

HSP 1 Score: 539.7 bits (1389), Expect = 1.5e-149
Identity = 255/269 (94.80%), Postives = 262/269 (97.40%), Query Frame = 0


Query: 1   MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           MGLSNNITAI+NFLA LCSIPIIGAGIWLASKPDN CIHFFRWPVVL+GVLILLVSLAGF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLIGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMALLIGL LVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LKNHLTNSGNWPKIRTCLAESDVCPKLNLQYFAADQFFAADISPLQSGCCKPPTACGYNF 180
           LK+HLTNS NWPKIRTCLAESDVCPKLN QYFAADQFFAADISPLQSGCCKPPTACG+NF
Sbjct: 121 LKSHLTNSRNWPKIRTCLAESDVCPKLNQQYFAADQFFAADISPLQSGCCKPPTACGFNF 180

Query: 181 VNPTLWLNPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVVV 240
           VNPTLWLNP DPMADPDCY+WSNDQTQLCYNCNSCKAGLLGNLR+EWR+ANVVLIVTVVV
Sbjct: 181 VNPTLWLNPVDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240

Query: 241 LICVYVIGCSAFKNAQTEDLFRRYKQGWI 270
           LI VYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

[Close]

BLAST of MS023706 vs. NCBI nr
Match: XP_022946466.1 (tetraspanin-2-like [Cucurbita moschata])

HSP 1 Score: 537.7 bits (1384), Expect = 5.6e-149
Identity = 254/269 (94.42%), Postives = 259/269 (96.28%), Query Frame = 0


Query: 1   MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           MGLSNNITAIVNFLA LCSIPIIGAGIWLASKPD  CIHFFRWPVVLLGVLILLVSLAGF
Sbjct: 1   MGLSNNITAIVNFLALLCSIPIIGAGIWLASKPDYECIHFFRWPVVLLGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMALLIGL LVLLVFTFVV RPDGSYTV+GRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVARPDGSYTVIGRGFKEYRLDGFSSW 120

Query: 121 LKNHLTNSGNWPKIRTCLAESDVCPKLNLQYFAADQFFAADISPLQSGCCKPPTACGYNF 180
           LKNHLTNS NWPKIRTCL ESDVC KLN +YFAADQFFAADISPLQSGCCKPPTACGYNF
Sbjct: 121 LKNHLTNSRNWPKIRTCLPESDVCSKLNQRYFAADQFFAADISPLQSGCCKPPTACGYNF 180

Query: 181 VNPTLWLNPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVVV 240
           VNPTLWLNPGDPMADPDCY+WSNDQTQLCYNCNSCKAGLLGNLRKEWR+ANVVLIVTVV+
Sbjct: 181 VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRKEWRKANVVLIVTVVI 240

Query: 241 LICVYVIGCSAFKNAQTEDLFRRYKQGWI 270
           LICVYVIGCSAFKNAQTEDLFRRYK GWI
Sbjct: 241 LICVYVIGCSAFKNAQTEDLFRRYKLGWI 269

[Close]

BLAST of MS023706 vs. NCBI nr
Match: XP_008459286.1 (PREDICTED: tetraspanin-2 [Cucumis melo] >KAA0061498.1 tetraspanin-2 [Cucumis melo var. makuwa] >TYK10775.1 tetraspanin-2 [Cucumis melo var. makuwa])

HSP 1 Score: 537.7 bits (1384), Expect = 5.6e-149
Identity = 253/269 (94.05%), Postives = 262/269 (97.40%), Query Frame = 0


Query: 1   MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           MGLSNNITAI+NFLA LCSIPIIGAGIWLASKPDN CIHFFRWPVV++GVLILLVSLAGF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVIIGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMA+LIGL LVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMAVLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LKNHLTNSGNWPKIRTCLAESDVCPKLNLQYFAADQFFAADISPLQSGCCKPPTACGYNF 180
           LK+HLTNS NWPKIRTCLAESDVCPKLN QYFAADQFFAADISPLQSGCCKPPTACG+NF
Sbjct: 121 LKSHLTNSRNWPKIRTCLAESDVCPKLNQQYFAADQFFAADISPLQSGCCKPPTACGFNF 180

Query: 181 VNPTLWLNPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVVV 240
           VNPTLWLNP DPMADPDCY+WSNDQTQLCYNCNSCKAGLLGNLR+EWR+ANVVLIVTVVV
Sbjct: 181 VNPTLWLNPVDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240

Query: 241 LICVYVIGCSAFKNAQTEDLFRRYKQGWI 270
           LI VYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

[Close]

BLAST of MS023706 vs. ExPASy Swiss-Prot
Match: Q9ZUN5 (Tetraspanin-2 OS=Arabidopsis thaliana OX=3702 GN=TET2 PE=2 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 1.7e-119
Identity = 197/270 (72.96%), Postives = 235/270 (87.04%), Query Frame = 0


Query: 1   MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           M L+NN+TAI+N LA LCSIPI  +GIWLASKPDN C++  RWPVV+LGVLIL+VS  GF
Sbjct: 1   MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAY  ++ LLA YL CMA+LIGL LV+L+F FVVTRPDGSY V GRG+KEYRL+GFS+W
Sbjct: 61  IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120

Query: 121 LKNHLTNSGNWPKIRTCLAESDVCPKLNLQYFAADQFFAAD-ISPLQSGCCKPPTACGYN 180
           LK ++ +S NW ++R CLA+++VCPKLN ++  ADQFF++  I+PLQSGCCKPPTACGYN
Sbjct: 121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYN 180

Query: 181 FVNPTLWLNPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVV 240
           FVNPTLWLNP +  AD DCYLWSNDQ+QLCYNCNSCKAGLLGNLRKEWR+AN++LI+TVV
Sbjct: 181 FVNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVV 240

Query: 241 VLICVYVIGCSAFKNAQTEDLFRRYKQGWI 270
           VLI VYVI CSAF+NAQTEDLFR+YKQGW+
Sbjct: 241 VLIWVYVIACSAFRNAQTEDLFRKYKQGWV 270

[Close]

BLAST of MS023706 vs. ExPASy Swiss-Prot
Match: Q9FIQ5 (Protein TORNADO 2 OS=Arabidopsis thaliana OX=3702 GN=TRN2 PE=1 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.6e-82
Identity = 139/268 (51.87%), Postives = 184/268 (68.66%), Query Frame = 0


Query: 1   MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           M LSNN+   +NF+  L SIP+IGAGIWLA    N C+   +WPV++LGVLILLV LAGF
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IG +W    LL  YL  M +LI L   L+ F ++VT     +    R + EY L  FS W
Sbjct: 61  IGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGW 120

Query: 121 LKNHLTNSGNWPKIRTCLAESDVCPKLNLQYFAADQFFAADISPLQSGCCKPPTACGYNF 180
           L+  +  S  W +IRTCL+ + +CP+LN +Y  A  FF A + P+QSGCCKPPT CG+ F
Sbjct: 121 LRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQSGCCKPPTKCGFTF 180

Query: 181 VNPTLWLNPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVVV 240
           VNPT W++P D  AD DC  WSNDQ  LCY C+SCKAGLL N++ +W +A++ L++ ++ 
Sbjct: 181 VNPTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALIG 240

Query: 241 LICVYVIGCSAFKNAQTEDLFRRYKQGW 269
           LI VY+IGC AF+NA+TED+FR+YKQG+
Sbjct: 241 LIIVYIIGCCAFRNAETEDIFRKYKQGY 268

[Close]

BLAST of MS023706 vs. ExPASy Swiss-Prot
Match: Q9M1E7 (Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.2e-64
Identity = 113/265 (42.64%), Postives = 176/265 (66.42%), Query Frame = 0


Query: 1   MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDN-GCIHFFRWPVVLLGVLILLVSLAG 60
           M  SN++  +VNFL FL SIPI+G GIWL+S+ ++  C+ F +WP++++G+ I++VSLAG
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 61  FIGAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSS 120
           F GA +  + L+  YL  M L+I   +  ++F + VT      TV+ RG+ +Y L+ +S 
Sbjct: 61  FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query: 121 WLKNHLTNSGNWPKIRTCLAESDVCPKLNLQY----FAADQFFAADISPLQSGCCKPPTA 180
           WLK+ +++   W KI +CL +S  C K+   +      AD FF   +SP++SGCCKPPT 
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query: 181 CGYNFVNPTLWLNPGDPMA-DPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVL 240
           CG+++VN T W   G  +  + DC +WSNDQ+ LCY C+SCKAG+LG+L+K WR+ +V+ 
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 IVTVVVLICVYVIGCSAFKNAQTED 260
           IV +++L+  YVI  +A++N +  D
Sbjct: 241 IVVLIILVIFYVIAYAAYRNVKRID 265

[Close]

BLAST of MS023706 vs. ExPASy Swiss-Prot
Match: Q9LSS4 (Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.4e-64
Identity = 111/258 (43.02%), Postives = 174/258 (67.44%), Query Frame = 0


Query: 5   NNITAIVNFLAFLCSIPIIGAGIWLASKPDN-GCIHFFRWPVVLLGVLILLVSLAGFIGA 64
           +N+  ++NF  FL SIPI+G GIWL+S+ ++  C+ F +WP++++G+ I+++SLAG  GA
Sbjct: 5   SNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGIAGA 64

Query: 65  YWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSWLKN 124
            +  + L+  YLF M  +I   +   +F +VVT       VM R + +Y L+ +S WLK+
Sbjct: 65  CYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGWLKD 124

Query: 125 HLTNSGNWPKIRTCLAESDVCPK----LNLQYFAADQFFAADISPLQSGCCKPPTACGYN 184
            +T++G W  I +C+ +S VC K    LN     A  F+  ++SP++SGCCKPPT CGY 
Sbjct: 125 RVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDCGYT 184

Query: 185 FVNPTLWLNPGDPMA-DPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTV 244
           +VN T+W+  G+ +  +PDC LW+NDQ  LCY C+SCKAG+LG+L+K WR+ +V+ IV V
Sbjct: 185 YVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVVV 244

Query: 245 VVLICVYVIGCSAFKNAQ 257
           ++L+  YVI C+A++N +
Sbjct: 245 IILVIFYVIACAAYQNVK 262

[Close]

BLAST of MS023706 vs. ExPASy Swiss-Prot
Match: Q8S8Q6 (Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.3e-63
Identity = 118/263 (44.87%), Postives = 163/263 (61.98%), Query Frame = 0


Query: 4   SNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGFIGA 63
           SNN+  I+NFL FL SIPI+  GIWL+ K    C  F   PV+ LGV +++V++AG IG+
Sbjct: 5   SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGS 64

Query: 64  YWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSWLKN 123
                 LL  YLF M LLI L   + VF FVVT       + G+G+KEY+L  +S+WL+ 
Sbjct: 65  CCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQK 124

Query: 124 HLTNSGNWPKIRTCLAESDVCPKLNLQY--FAADQFFAADISPLQSGCCKPPTACGYNFV 183
            + N  NW KIR+CL ES VC KL  ++     + F+   ++ LQSGCCKP   CG+ +V
Sbjct: 125 RVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECGFEYV 184

Query: 184 NPTLWL-NPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVVV 243
           NPT W  N      +PDC  W N + +LC++C SCKAGLL N++  W++  +V IV +V 
Sbjct: 185 NPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFLVF 244

Query: 244 LICVYVIGCSAFKNAQTEDLFRR 264
           LI VY +GC AF+N + +D + R
Sbjct: 245 LIIVYSVGCCAFRNNKRDDSYSR 267

[Close]

BLAST of MS023706 vs. ExPASy TrEMBL
Match: A0A6J1DN18 (tetraspanin-2 OS=Momordica charantia OX=3673 GN=LOC111021918 PE=3 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 4.2e-158
Identity = 267/269 (99.26%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF
Sbjct: 1   MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           +GAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKE+RLDGFSSW
Sbjct: 61  VGAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEFRLDGFSSW 120

Query: 121 LKNHLTNSGNWPKIRTCLAESDVCPKLNLQYFAADQFFAADISPLQSGCCKPPTACGYNF 180
           LKNHLTNSGNWPKIRTCLAESDVCPKLNLQYFAADQFFAADISPLQSGCCKPPTACGYNF
Sbjct: 121 LKNHLTNSGNWPKIRTCLAESDVCPKLNLQYFAADQFFAADISPLQSGCCKPPTACGYNF 180

Query: 181 VNPTLWLNPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVVV 240
           VNPTLWLNPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVVV
Sbjct: 181 VNPTLWLNPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVVV 240

Query: 241 LICVYVIGCSAFKNAQTEDLFRRYKQGWI 270
           LICVYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LICVYVIGCSAFKNAQTEDLFRRYKQGWI 269

[Close]

BLAST of MS023706 vs. ExPASy TrEMBL
Match: A0A0A0LFR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000510 PE=3 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 7.2e-150
Identity = 255/269 (94.80%), Postives = 262/269 (97.40%), Query Frame = 0


Query: 1   MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           MGLSNNITAI+NFLA LCSIPIIGAGIWLASKPDN CIHFFRWPVVL+GVLILLVSLAGF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVLIGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMALLIGL LVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LKNHLTNSGNWPKIRTCLAESDVCPKLNLQYFAADQFFAADISPLQSGCCKPPTACGYNF 180
           LK+HLTNS NWPKIRTCLAESDVCPKLN QYFAADQFFAADISPLQSGCCKPPTACG+NF
Sbjct: 121 LKSHLTNSRNWPKIRTCLAESDVCPKLNQQYFAADQFFAADISPLQSGCCKPPTACGFNF 180

Query: 181 VNPTLWLNPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVVV 240
           VNPTLWLNP DPMADPDCY+WSNDQTQLCYNCNSCKAGLLGNLR+EWR+ANVVLIVTVVV
Sbjct: 181 VNPTLWLNPVDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240

Query: 241 LICVYVIGCSAFKNAQTEDLFRRYKQGWI 270
           LI VYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

[Close]

BLAST of MS023706 vs. ExPASy TrEMBL
Match: A0A5A7V1S6 (Tetraspanin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00880 PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 2.7e-149
Identity = 253/269 (94.05%), Postives = 262/269 (97.40%), Query Frame = 0


Query: 1   MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           MGLSNNITAI+NFLA LCSIPIIGAGIWLASKPDN CIHFFRWPVV++GVLILLVSLAGF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVIIGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMA+LIGL LVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMAVLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LKNHLTNSGNWPKIRTCLAESDVCPKLNLQYFAADQFFAADISPLQSGCCKPPTACGYNF 180
           LK+HLTNS NWPKIRTCLAESDVCPKLN QYFAADQFFAADISPLQSGCCKPPTACG+NF
Sbjct: 121 LKSHLTNSRNWPKIRTCLAESDVCPKLNQQYFAADQFFAADISPLQSGCCKPPTACGFNF 180

Query: 181 VNPTLWLNPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVVV 240
           VNPTLWLNP DPMADPDCY+WSNDQTQLCYNCNSCKAGLLGNLR+EWR+ANVVLIVTVVV
Sbjct: 181 VNPTLWLNPVDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240

Query: 241 LICVYVIGCSAFKNAQTEDLFRRYKQGWI 270
           LI VYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

[Close]

BLAST of MS023706 vs. ExPASy TrEMBL
Match: A0A6J1G3S5 (tetraspanin-2-like OS=Cucurbita moschata OX=3662 GN=LOC111450517 PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 2.7e-149
Identity = 254/269 (94.42%), Postives = 259/269 (96.28%), Query Frame = 0


Query: 1   MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           MGLSNNITAIVNFLA LCSIPIIGAGIWLASKPD  CIHFFRWPVVLLGVLILLVSLAGF
Sbjct: 1   MGLSNNITAIVNFLALLCSIPIIGAGIWLASKPDYECIHFFRWPVVLLGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMALLIGL LVLLVFTFVV RPDGSYTV+GRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMALLIGLLLVLLVFTFVVARPDGSYTVIGRGFKEYRLDGFSSW 120

Query: 121 LKNHLTNSGNWPKIRTCLAESDVCPKLNLQYFAADQFFAADISPLQSGCCKPPTACGYNF 180
           LKNHLTNS NWPKIRTCL ESDVC KLN +YFAADQFFAADISPLQSGCCKPPTACGYNF
Sbjct: 121 LKNHLTNSRNWPKIRTCLPESDVCSKLNQRYFAADQFFAADISPLQSGCCKPPTACGYNF 180

Query: 181 VNPTLWLNPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVVV 240
           VNPTLWLNPGDPMADPDCY+WSNDQTQLCYNCNSCKAGLLGNLRKEWR+ANVVLIVTVV+
Sbjct: 181 VNPTLWLNPGDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRKEWRKANVVLIVTVVI 240

Query: 241 LICVYVIGCSAFKNAQTEDLFRRYKQGWI 270
           LICVYVIGCSAFKNAQTEDLFRRYK GWI
Sbjct: 241 LICVYVIGCSAFKNAQTEDLFRRYKLGWI 269

[Close]

BLAST of MS023706 vs. ExPASy TrEMBL
Match: A0A1S3CB14 (tetraspanin-2 OS=Cucumis melo OX=3656 GN=LOC103498461 PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 2.7e-149
Identity = 253/269 (94.05%), Postives = 262/269 (97.40%), Query Frame = 0


Query: 1   MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           MGLSNNITAI+NFLA LCSIPIIGAGIWLASKPDN CIHFFRWPVV++GVLILLVSLAGF
Sbjct: 1   MGLSNNITAILNFLALLCSIPIIGAGIWLASKPDNECIHFFRWPVVIIGVLILLVSLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAYWNRQGLLAFYLFCMA+LIGL LVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW
Sbjct: 61  IGAYWNRQGLLAFYLFCMAVLIGLLLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120

Query: 121 LKNHLTNSGNWPKIRTCLAESDVCPKLNLQYFAADQFFAADISPLQSGCCKPPTACGYNF 180
           LK+HLTNS NWPKIRTCLAESDVCPKLN QYFAADQFFAADISPLQSGCCKPPTACG+NF
Sbjct: 121 LKSHLTNSRNWPKIRTCLAESDVCPKLNQQYFAADQFFAADISPLQSGCCKPPTACGFNF 180

Query: 181 VNPTLWLNPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVVV 240
           VNPTLWLNP DPMADPDCY+WSNDQTQLCYNCNSCKAGLLGNLR+EWR+ANVVLIVTVVV
Sbjct: 181 VNPTLWLNPVDPMADPDCYIWSNDQTQLCYNCNSCKAGLLGNLRREWRKANVVLIVTVVV 240

Query: 241 LICVYVIGCSAFKNAQTEDLFRRYKQGWI 270
           LI VYVIGCSAFKNAQTEDLFRRYKQGWI
Sbjct: 241 LIWVYVIGCSAFKNAQTEDLFRRYKQGWI 269

[Close]

BLAST of MS023706 vs. TAIR 10
Match: AT2G19580.1 (tetraspanin2 )

HSP 1 Score: 430.3 bits (1105), Expect = 1.2e-120
Identity = 197/270 (72.96%), Postives = 235/270 (87.04%), Query Frame = 0


Query: 1   MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           M L+NN+TAI+N LA LCSIPI  +GIWLASKPDN C++  RWPVV+LGVLIL+VS  GF
Sbjct: 1   MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IGAY  ++ LLA YL CMA+LIGL LV+L+F FVVTRPDGSY V GRG+KEYRL+GFS+W
Sbjct: 61  IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120

Query: 121 LKNHLTNSGNWPKIRTCLAESDVCPKLNLQYFAADQFFAAD-ISPLQSGCCKPPTACGYN 180
           LK ++ +S NW ++R CLA+++VCPKLN ++  ADQFF++  I+PLQSGCCKPPTACGYN
Sbjct: 121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYN 180

Query: 181 FVNPTLWLNPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVV 240
           FVNPTLWLNP +  AD DCYLWSNDQ+QLCYNCNSCKAGLLGNLRKEWR+AN++LI+TVV
Sbjct: 181 FVNPTLWLNPTNMAADADCYLWSNDQSQLCYNCNSCKAGLLGNLRKEWRKANLILIITVV 240

Query: 241 VLICVYVIGCSAFKNAQTEDLFRRYKQGWI 270
           VLI VYVI CSAF+NAQTEDLFR+YKQGW+
Sbjct: 241 VLIWVYVIACSAFRNAQTEDLFRKYKQGWV 270

[Close]

BLAST of MS023706 vs. TAIR 10
Match: AT5G46700.1 (Tetraspanin family protein )

HSP 1 Score: 307.4 bits (786), Expect = 1.2e-83
Identity = 139/268 (51.87%), Postives = 184/268 (68.66%), Query Frame = 0


Query: 1   MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGF 60
           M LSNN+   +NF+  L SIP+IGAGIWLA    N C+   +WPV++LGVLILLV LAGF
Sbjct: 1   MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60

Query: 61  IGAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSW 120
           IG +W    LL  YL  M +LI L   L+ F ++VT     +    R + EY L  FS W
Sbjct: 61  IGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGW 120

Query: 121 LKNHLTNSGNWPKIRTCLAESDVCPKLNLQYFAADQFFAADISPLQSGCCKPPTACGYNF 180
           L+  +  S  W +IRTCL+ + +CP+LN +Y  A  FF A + P+QSGCCKPPT CG+ F
Sbjct: 121 LRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQSGCCKPPTKCGFTF 180

Query: 181 VNPTLWLNPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVVV 240
           VNPT W++P D  AD DC  WSNDQ  LCY C+SCKAGLL N++ +W +A++ L++ ++ 
Sbjct: 181 VNPTYWISPIDMSADMDCLNWSNDQNTLCYTCDSCKAGLLANIKVDWLKADIFLLLALIG 240

Query: 241 LICVYVIGCSAFKNAQTEDLFRRYKQGW 269
           LI VY+IGC AF+NA+TED+FR+YKQG+
Sbjct: 241 LIIVYIIGCCAFRNAETEDIFRKYKQGY 268

[Close]

BLAST of MS023706 vs. TAIR 10
Match: AT3G45600.1 (tetraspanin3 )

HSP 1 Score: 248.1 bits (632), Expect = 8.3e-66
Identity = 113/265 (42.64%), Postives = 176/265 (66.42%), Query Frame = 0


Query: 1   MGLSNNITAIVNFLAFLCSIPIIGAGIWLASKPDN-GCIHFFRWPVVLLGVLILLVSLAG 60
           M  SN++  +VNFL FL SIPI+G GIWL+S+ ++  C+ F +WP++++G+ I++VSLAG
Sbjct: 1   MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60

Query: 61  FIGAYWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSS 120
           F GA +  + L+  YL  M L+I   +  ++F + VT      TV+ RG+ +Y L+ +S 
Sbjct: 61  FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120

Query: 121 WLKNHLTNSGNWPKIRTCLAESDVCPKLNLQY----FAADQFFAADISPLQSGCCKPPTA 180
           WLK+ +++   W KI +CL +S  C K+   +      AD FF   +SP++SGCCKPPT 
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 180

Query: 181 CGYNFVNPTLWLNPGDPMA-DPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVL 240
           CG+++VN T W   G  +  + DC +WSNDQ+ LCY C+SCKAG+LG+L+K WR+ +V+ 
Sbjct: 181 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 240

Query: 241 IVTVVVLICVYVIGCSAFKNAQTED 260
           IV +++L+  YVI  +A++N +  D
Sbjct: 241 IVVLIILVIFYVIAYAAYRNVKRID 265

[Close]

BLAST of MS023706 vs. TAIR 10
Match: AT5G60220.1 (tetraspanin4 )

HSP 1 Score: 246.5 bits (628), Expect = 2.4e-65
Identity = 111/258 (43.02%), Postives = 174/258 (67.44%), Query Frame = 0


Query: 5   NNITAIVNFLAFLCSIPIIGAGIWLASKPDN-GCIHFFRWPVVLLGVLILLVSLAGFIGA 64
           +N+  ++NF  FL SIPI+G GIWL+S+ ++  C+ F +WP++++G+ I+++SLAG  GA
Sbjct: 5   SNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGIAGA 64

Query: 65  YWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSWLKN 124
            +  + L+  YLF M  +I   +   +F +VVT       VM R + +Y L+ +S WLK+
Sbjct: 65  CYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSGWLKD 124

Query: 125 HLTNSGNWPKIRTCLAESDVCPK----LNLQYFAADQFFAADISPLQSGCCKPPTACGYN 184
            +T++G W  I +C+ +S VC K    LN     A  F+  ++SP++SGCCKPPT CGY 
Sbjct: 125 RVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDCGYT 184

Query: 185 FVNPTLWLNPGDPMA-DPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTV 244
           +VN T+W+  G+ +  +PDC LW+NDQ  LCY C+SCKAG+LG+L+K WR+ +V+ IV V
Sbjct: 185 YVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVVV 244

Query: 245 VVLICVYVIGCSAFKNAQ 257
           ++L+  YVI C+A++N +
Sbjct: 245 IILVIFYVIACAAYQNVK 262

[Close]

BLAST of MS023706 vs. TAIR 10
Match: AT2G23810.1 (tetraspanin8 )

HSP 1 Score: 244.6 bits (623), Expect = 9.2e-65
Identity = 118/263 (44.87%), Postives = 163/263 (61.98%), Query Frame = 0


Query: 4   SNNITAIVNFLAFLCSIPIIGAGIWLASKPDNGCIHFFRWPVVLLGVLILLVSLAGFIGA 63
           SNN+  I+NFL FL SIPI+  GIWL+ K    C  F   PV+ LGV +++V++AG IG+
Sbjct: 5   SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGS 64

Query: 64  YWNRQGLLAFYLFCMALLIGLFLVLLVFTFVVTRPDGSYTVMGRGFKEYRLDGFSSWLKN 123
                 LL  YLF M LLI L   + VF FVVT       + G+G+KEY+L  +S+WL+ 
Sbjct: 65  CCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQK 124

Query: 124 HLTNSGNWPKIRTCLAESDVCPKLNLQY--FAADQFFAADISPLQSGCCKPPTACGYNFV 183
            + N  NW KIR+CL ES VC KL  ++     + F+   ++ LQSGCCKP   CG+ +V
Sbjct: 125 RVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECGFEYV 184

Query: 184 NPTLWL-NPGDPMADPDCYLWSNDQTQLCYNCNSCKAGLLGNLRKEWRRANVVLIVTVVV 243
           NPT W  N      +PDC  W N + +LC++C SCKAGLL N++  W++  +V IV +V 
Sbjct: 185 NPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFLVF 244

Query: 244 LICVYVIGCSAFKNAQTEDLFRR 264
           LI VY +GC AF+N + +D + R
Sbjct: 245 LIIVYSVGCCAFRNNKRDDSYSR 267

The following BLAST results are available for this feature:

BLAST of MS023706 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154738.1	8.7e-158	99.26	tetraspanin-2 [Momordica charantia] >XP_022154739.1 tetraspanin-2 [Momordica cha...	[more]
XP_038890423.1	1.7e-150	95.17	tetraspanin-2-like [Benincasa hispida]	[more]
XP_004141051.1	1.5e-149	94.80	tetraspanin-2 [Cucumis sativus] >KGN60543.1 hypothetical protein Csa_019435 [Cuc...	[more]
XP_022946466.1	5.6e-149	94.42	tetraspanin-2-like [Cucurbita moschata]	[more]
XP_008459286.1	5.6e-149	94.05	PREDICTED: tetraspanin-2 [Cucumis melo] >KAA0061498.1 tetraspanin-2 [Cucumis mel...	[more]

BLAST of MS023706 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUN5	1.7e-119	72.96	Tetraspanin-2 OS=Arabidopsis thaliana OX=3702 GN=TET2 PE=2 SV=1	[more]
Q9FIQ5	1.6e-82	51.87	Protein TORNADO 2 OS=Arabidopsis thaliana OX=3702 GN=TRN2 PE=1 SV=1	[more]
Q9M1E7	1.2e-64	42.64	Tetraspanin-3 OS=Arabidopsis thaliana OX=3702 GN=TET3 PE=1 SV=1	[more]
Q9LSS4	3.4e-64	43.02	Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1	[more]
Q8S8Q6	1.3e-63	44.87	Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1	[more]

BLAST of MS023706 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DN18	4.2e-158	99.26	tetraspanin-2 OS=Momordica charantia OX=3673 GN=LOC111021918 PE=3 SV=1	[more]
A0A0A0LFR6	7.2e-150	94.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000510 PE=3 SV=1	[more]
A0A5A7V1S6	2.7e-149	94.05	Tetraspanin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00880 ...	[more]
A0A6J1G3S5	2.7e-149	94.42	tetraspanin-2-like OS=Cucurbita moschata OX=3662 GN=LOC111450517 PE=3 SV=1	[more]
A0A1S3CB14	2.7e-149	94.05	tetraspanin-2 OS=Cucumis melo OX=3656 GN=LOC103498461 PE=3 SV=1	[more]

BLAST of MS023706 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19580.1	1.2e-120	72.96	tetraspanin2	[more]
AT5G46700.1	1.2e-83	51.87	Tetraspanin family protein	[more]
AT3G45600.1	8.3e-66	42.64	tetraspanin3	[more]
AT5G60220.1	2.4e-65	43.02	tetraspanin4	[more]
AT2G23810.1	9.2e-65	44.87	tetraspanin8	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00259	TMFOUR	coord: 65..93 score: 16.29 coord: 38..64 score: 21.75 coord: 6..29 score: 25.89
None	No IPR available	PANTHER	PTHR32191:SF0	TETRASPANIN-2	coord: 1..266
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 7..250 e-value: 8.6E-30 score: 104.1
IPR044991	Tetraspani, plant	PANTHER	PTHR32191	TETRASPANIN-8-RELATED	coord: 1..266

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023706.1	MS023706.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0016021	integral component of membrane