MS023628 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGGCCGAAGCTTTCGGGGCTGCAAAAGCAGGTGCTCAGTCTCTACAGAGGATTTCTACGAGCGGCGCGCTCCAAATCCGCCGAAGATCGGCGGCAGATGGAATCGCTTGTCGCCGCCGAGTTTCGCCGGAACGCCGACCAAATCGATCGCAAAAACTTCATCTACATCGAGTACCTCCTCCGCCGAGGTAACAAACAGCTGGATCAGCTCAAAAGCCCGGCCACTGTTCGATTGTCGTCGATGAATGTCTCAAACGCCAGA AGGCCGAAGCTTTCGGGGCTGCAAAAGCAGGTGCTCAGTCTCTACAGAGGATTTCTACGAGCGGCGCGCTCCAAATCCGCCGAAGATCGGCGGCAGATGGAATCGCTTGTCGCCGCCGAGTTTCGCCGGAACGCCGACCAAATCGATCGCAAAAACTTCATCTACATCGAGTACCTCCTCCGCCGAGGTAACAAACAGCTGGATCAGCTCAAAAGCCCGGCCACTGTTCGATTGTCGTCGATGAATGTCTCAAACGCCAGA AGGCCGAAGCTTTCGGGGCTGCAAAAGCAGGTGCTCAGTCTCTACAGAGGATTTCTACGAGCGGCGCGCTCCAAATCCGCCGAAGATCGGCGGCAGATGGAATCGCTTGTCGCCGCCGAGTTTCGCCGGAACGCCGACCAAATCGATCGCAAAAACTTCATCTACATCGAGTACCTCCTCCGCCGAGGTAACAAACAGCTGGATCAGCTCAAAAGCCCGGCCACTGTTCGATTGTCGTCGATGAATGTCTCAAACGCCAGA RPKLSGLQKQVLSLYRGFLRAARSKSAEDRRQMESLVAAEFRRNADQIDRKNFIYIEYLLRRGNKQLDQLKSPATVRLSSMNVSNAR Homology
BLAST of MS023628 vs. NCBI nr
Match: XP_022141880.1 (succinate dehydrogenase assembly factor 1, mitochondrial [Momordica charantia]) HSP 1 Score: 161.8 bits (408), Expect = 2.7e-36 Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0
BLAST of MS023628 vs. NCBI nr
Match: XP_038999431.1 (succinate dehydrogenase assembly factor 1, mitochondrial-like [Hibiscus syriacus] >XP_038999436.1 succinate dehydrogenase assembly factor 1, mitochondrial-like [Hibiscus syriacus]) HSP 1 Score: 137.1 bits (344), Expect = 7.2e-29 Identity = 69/83 (83.13%), Postives = 80/83 (96.39%), Query Frame = 0
BLAST of MS023628 vs. NCBI nr
Match: XP_008459591.1 (PREDICTED: succinate dehydrogenase assembly factor 1, mitochondrial [Cucumis melo]) HSP 1 Score: 136.7 bits (343), Expect = 9.4e-29 Identity = 71/80 (88.75%), Postives = 77/80 (96.25%), Query Frame = 0
BLAST of MS023628 vs. NCBI nr
Match: XP_038890134.1 (succinate dehydrogenase assembly factor 1, mitochondrial [Benincasa hispida]) HSP 1 Score: 136.0 bits (341), Expect = 1.6e-28 Identity = 71/80 (88.75%), Postives = 76/80 (95.00%), Query Frame = 0
BLAST of MS023628 vs. NCBI nr
Match: XP_011656085.1 (succinate dehydrogenase assembly factor 1, mitochondrial [Cucumis sativus] >KGN52665.1 hypothetical protein Csa_008140 [Cucumis sativus]) HSP 1 Score: 135.2 bits (339), Expect = 2.7e-28 Identity = 70/80 (87.50%), Postives = 76/80 (95.00%), Query Frame = 0
BLAST of MS023628 vs. ExPASy Swiss-Prot
Match: B0K036 (Succinate dehydrogenase assembly factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdhaf1 PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 8.0e-07 Identity = 35/70 (50.00%), Postives = 45/70 (64.29%), Query Frame = 0
BLAST of MS023628 vs. ExPASy Swiss-Prot
Match: A6NFY7 (Succinate dehydrogenase assembly factor 1, mitochondrial OS=Homo sapiens OX=9606 GN=SDHAF1 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 3.0e-06 Identity = 34/68 (50.00%), Postives = 43/68 (63.24%), Query Frame = 0
BLAST of MS023628 vs. ExPASy Swiss-Prot
Match: A8PU71 (Succinate dehydrogenase assembly factor 1, mitochondrial OS=Bos taurus OX=9913 GN=SDHAF1 PE=3 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 5.2e-06 Identity = 34/68 (50.00%), Postives = 43/68 (63.24%), Query Frame = 0
BLAST of MS023628 vs. ExPASy Swiss-Prot
Match: Q9US02 (Succinate dehydrogenase assembly factor 1, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC664.12c PE=3 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 6.8e-06 Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
BLAST of MS023628 vs. ExPASy Swiss-Prot
Match: Q54HG5 (Succinate dehydrogenase assembly factor 1A, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=sdhaf1A PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 8.8e-06 Identity = 28/70 (40.00%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of MS023628 vs. ExPASy TrEMBL
Match: A0A6J1CJC1 (succinate dehydrogenase assembly factor 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111012137 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.3e-36 Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0
BLAST of MS023628 vs. ExPASy TrEMBL
Match: A0A1S3CAJ2 (succinate dehydrogenase assembly factor 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103498675 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 4.5e-29 Identity = 71/80 (88.75%), Postives = 77/80 (96.25%), Query Frame = 0
BLAST of MS023628 vs. ExPASy TrEMBL
Match: A0A0A0KST3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G649345 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.3e-28 Identity = 70/80 (87.50%), Postives = 76/80 (95.00%), Query Frame = 0
BLAST of MS023628 vs. ExPASy TrEMBL
Match: A0A7N2LDJ5 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.9e-28 Identity = 68/83 (81.93%), Postives = 77/83 (92.77%), Query Frame = 0
BLAST of MS023628 vs. ExPASy TrEMBL
Match: A0A1U8KMI7 (succinate dehydrogenase assembly factor 1, mitochondrial-like OS=Gossypium hirsutum OX=3635 GN=LOC107918589 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 5.5e-27 Identity = 65/85 (76.47%), Postives = 78/85 (91.76%), Query Frame = 0
BLAST of MS023628 vs. TAIR 10
Match: AT2G39725.1 (LYR family of Fe/S cluster biogenesis protein ) HSP 1 Score: 113.6 bits (283), Expect = 7.9e-26 Identity = 58/85 (68.24%), Postives = 71/85 (83.53%), Query Frame = 0
BLAST of MS023628 vs. TAIR 10
Match: AT2G39725.2 (LYR family of Fe/S cluster biogenesis protein ) HSP 1 Score: 113.6 bits (283), Expect = 7.9e-26 Identity = 58/85 (68.24%), Postives = 71/85 (83.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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