MS023624 (gene) Bitter gourd (TR) v1

Overview


Name	MS023624
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Aspartokinase
Location	scaffold155: 729950 .. 730094 (+)
RNA-Seq Expression	MS023624
Synteny	MS023624

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTATTTGAAATTGAGAGCTCTTCAACGACAGTCCTATACTCATTACTTTTATGAAGCTACATTGGAGCCGGTCTACCAATATTAGCACCCTACGCGGTTTGCTTGAAACTGGAGACAAAATATTGCGTATTGAAGGCATCTTC

mRNA sequence

CAGTATTTGAAATTGAGAGCTCTTCAACGACAGTCCTATACTCATTACTTTTATGAAGCTACATTGAGCCGGTCTACCAATATTAGCACCCTACGCGGTTTGCTTGAAACTGGAGACAAAATATTGCGTATTGAAGGCATCTTC

Coding sequence (CDS)

CAGTATTTGAAATTGAGAGCTCTTCAACGACAGTCCTATACTCATTACTTTTATGAAGCTACATTGAGCCGGTCTACCAATATTAGCACCCTACGCGGTTTGCTTGAAACTGGAGACAAAATATTGCGTATTGAAGGCATCTTC

Protein sequence

QYLKLRALQRQSYTHYFYEATLSRSTNISTLRGLLETGDKILRIEGIF

Homology

[Close]

BLAST of MS023624 vs. NCBI nr
Match: XP_030474640.1 (bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic-like isoform X2 [Syzygium oleosum])

HSP 1 Score: 78.6 bits (192), Expect = 1.7e-11
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1   QYLKLRALQRQSYTHYFYEATLSRSTNI-STLRGLLETGDKILRIEGIF 49
           QYLKLRALQRQSYTHYFYEAT+     I STLRGLLETGDKILRIEGIF
Sbjct: 697 QYLKLRALQRQSYTHYFYEATVGAGLPIVSTLRGLLETGDKILRIEGIF 745

[Close]

BLAST of MS023624 vs. NCBI nr
Match: OVA14558.1 (Aspartate/glutamate/uridylate kinase [Macleaya cordata])

HSP 1 Score: 78.6 bits (192), Expect = 1.7e-11
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1   QYLKLRALQRQSYTHYFYEATLSRSTNI-STLRGLLETGDKILRIEGIF 49
           QYLKLRALQRQSYTHYFYEAT+     I STLRGLLETGDKILRIEGIF
Sbjct: 695 QYLKLRALQRQSYTHYFYEATVGAGLPIVSTLRGLLETGDKILRIEGIF 743

[Close]

BLAST of MS023624 vs. NCBI nr
Match: KAG6751016.1 (hypothetical protein POTOM_045533 [Populus tomentosa])

HSP 1 Score: 78.6 bits (192), Expect = 1.7e-11
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1   QYLKLRALQRQSYTHYFYEATLSRSTN-ISTLRGLLETGDKILRIEGIF 49
           QYLKLRALQRQSYTHYFYEAT+      ISTLRGLLETGDKILRIEGIF
Sbjct: 726 QYLKLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIF 774

[Close]

BLAST of MS023624 vs. NCBI nr
Match: CAN82421.1 (hypothetical protein VITISV_034964 [Vitis vinifera])

HSP 1 Score: 78.6 bits (192), Expect = 1.7e-11
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1   QYLKLRALQRQSYTHYFYEATLSRSTN-ISTLRGLLETGDKILRIEGIF 49
           QYLKLRALQRQSYTHYFYEAT+      ISTLRGLLETGDKILRIEGIF
Sbjct: 607 QYLKLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIF 655

[Close]

BLAST of MS023624 vs. NCBI nr
Match: XP_030497511.1 (bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic [Cannabis sativa])

HSP 1 Score: 78.6 bits (192), Expect = 1.7e-11
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1   QYLKLRALQRQSYTHYFYEATLSRSTN-ISTLRGLLETGDKILRIEGIF 49
           QYLKLRALQRQSYTHYFYEAT+      ISTLRGLLETGDKILRIEGIF
Sbjct: 688 QYLKLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIF 736

[Close]

BLAST of MS023624 vs. ExPASy Swiss-Prot
Match: Q9SA18 (Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=AKHSDH1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 5.4e-13
Identity = 39/49 (79.59%), Postives = 42/49 (85.71%), Query Frame = 0


Query: 1   QYLKLRALQRQSYTHYFYEATLSRSTN-ISTLRGLLETGDKILRIEGIF 49
           QYLK+R LQR+SYTHYFYEAT+      ISTLRGLLETGDKILRIEGIF
Sbjct: 677 QYLKIRDLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIF 725

[Close]

BLAST of MS023624 vs. ExPASy Swiss-Prot
Match: P49080 (Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic OS=Zea mays OX=4577 GN=AKHSDH2 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 5.4e-13
Identity = 39/49 (79.59%), Postives = 41/49 (83.67%), Query Frame = 0


Query: 1   QYLKLRALQRQSYTHYFYEATLSRSTN-ISTLRGLLETGDKILRIEGIF 49
           QYLKLR +QR SYTHYFYEAT+      ISTLRGLLETGDKILRIEGIF
Sbjct: 683 QYLKLRTMQRASYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIF 731

[Close]

BLAST of MS023624 vs. ExPASy Swiss-Prot
Match: P37142 (Bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic (Fragment) OS=Daucus carota OX=4039 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 7.0e-13
Identity = 39/49 (79.59%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1   QYLKLRALQRQSYTHYFYEATLSRSTN-ISTLRGLLETGDKILRIEGIF 49
           QYLKLRALQR+SYTHYFYEAT+      I+TL+GLLETGDKILRIEGIF
Sbjct: 687 QYLKLRALQRRSYTHYFYEATVVAGLPIITTLQGLLETGDKILRIEGIF 735

[Close]

BLAST of MS023624 vs. ExPASy Swiss-Prot
Match: P49079 (Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Zea mays OX=4577 GN=AKHSDH1 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 9.2e-13
Identity = 39/49 (79.59%), Postives = 41/49 (83.67%), Query Frame = 0


Query: 1   QYLKLRALQRQSYTHYFYEATLSRSTN-ISTLRGLLETGDKILRIEGIF 49
           +YLKLR LQR SYTHYFYEAT+      ISTLRGLLETGDKILRIEGIF
Sbjct: 686 RYLKLRTLQRASYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIF 734

[Close]

BLAST of MS023624 vs. ExPASy Swiss-Prot
Match: O81852 (Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=AKHSDH2 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.6e-12
Identity = 39/48 (81.25%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 1   QYLKLRALQRQSYTHYFYEATLSRSTN-ISTLRGLLETGDKILRIEGI 48
           QYLKLR LQR+SYTHYFYEAT+      ISTLRGLLETGDKILRIEGI
Sbjct: 682 QYLKLRDLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGI 729

[Close]

BLAST of MS023624 vs. ExPASy TrEMBL
Match: A0A6J1I7L5 (Aspartokinase OS=Cucurbita maxima OX=3661 GN=LOC111472020 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 8.1e-12
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1   QYLKLRALQRQSYTHYFYEATLSRSTN-ISTLRGLLETGDKILRIEGIF 49
           QYLKLRALQRQSYTHYFYEAT+      ISTLRGLLETGDKILRIEGIF
Sbjct: 683 QYLKLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIF 731

[Close]

BLAST of MS023624 vs. ExPASy TrEMBL
Match: A0A6J1ID49 (Aspartokinase OS=Cucurbita maxima OX=3661 GN=LOC111472020 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 8.1e-12
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1   QYLKLRALQRQSYTHYFYEATLSRSTN-ISTLRGLLETGDKILRIEGIF 49
           QYLKLRALQRQSYTHYFYEAT+      ISTLRGLLETGDKILRIEGIF
Sbjct: 683 QYLKLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIF 731

[Close]

BLAST of MS023624 vs. ExPASy TrEMBL
Match: A0A2G5CAY0 (Aspartokinase OS=Aquilegia coerulea OX=218851 GN=AQUCO_07400096v1 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 8.1e-12
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1   QYLKLRALQRQSYTHYFYEATLSRSTN-ISTLRGLLETGDKILRIEGIF 49
           QYLKLRALQRQSYTHYFYEAT+      ISTLRGLLETGDKILRIEGIF
Sbjct: 689 QYLKLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIF 737

[Close]

BLAST of MS023624 vs. ExPASy TrEMBL
Match: A0A438HEP1 (Homoserine dehydrogenase OS=Vitis vinifera OX=29760 GN=AKHSDH1_0 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 8.1e-12
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1   QYLKLRALQRQSYTHYFYEATLSRSTN-ISTLRGLLETGDKILRIEGIF 49
           QYLKLRALQRQSYTHYFYEAT+      ISTLRGLLETGDKILRIEGIF
Sbjct: 100 QYLKLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIF 148

[Close]

BLAST of MS023624 vs. ExPASy TrEMBL
Match: A5APD8 (Aspartokinase OS=Vitis vinifera OX=29760 GN=VITISV_034964 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 8.1e-12
Identity = 42/49 (85.71%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 1   QYLKLRALQRQSYTHYFYEATLSRSTN-ISTLRGLLETGDKILRIEGIF 49
           QYLKLRALQRQSYTHYFYEAT+      ISTLRGLLETGDKILRIEGIF
Sbjct: 607 QYLKLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIF 655

[Close]

BLAST of MS023624 vs. TAIR 10
Match: AT1G31230.1 (aspartate kinase-homoserine dehydrogenase i )

HSP 1 Score: 73.9 bits (180), Expect = 3.8e-14
Identity = 39/49 (79.59%), Postives = 42/49 (85.71%), Query Frame = 0


Query: 1   QYLKLRALQRQSYTHYFYEATLSRSTN-ISTLRGLLETGDKILRIEGIF 49
           QYLK+R LQR+SYTHYFYEAT+      ISTLRGLLETGDKILRIEGIF
Sbjct: 677 QYLKIRDLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGIF 725

[Close]

BLAST of MS023624 vs. TAIR 10
Match: AT4G19710.1 (aspartate kinase-homoserine dehydrogenase ii )

HSP 1 Score: 72.4 bits (176), Expect = 1.1e-13
Identity = 39/48 (81.25%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 1   QYLKLRALQRQSYTHYFYEATLSRSTN-ISTLRGLLETGDKILRIEGI 48
           QYLKLR LQR+SYTHYFYEAT+      ISTLRGLLETGDKILRIEGI
Sbjct: 682 QYLKLRDLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGI 729

[Close]

BLAST of MS023624 vs. TAIR 10
Match: AT4G19710.2 (aspartate kinase-homoserine dehydrogenase ii )

HSP 1 Score: 72.4 bits (176), Expect = 1.1e-13
Identity = 39/48 (81.25%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 1   QYLKLRALQRQSYTHYFYEATLSRSTN-ISTLRGLLETGDKILRIEGI 48
           QYLKLR LQR+SYTHYFYEAT+      ISTLRGLLETGDKILRIEGI
Sbjct: 682 QYLKLRDLQRKSYTHYFYEATVGAGLPIISTLRGLLETGDKILRIEGI 729

The following BLAST results are available for this feature:

BLAST of MS023624 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_030474640.1	1.7e-11	85.71	bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic-like isofor...	[more]
OVA14558.1	1.7e-11	85.71	Aspartate/glutamate/uridylate kinase [Macleaya cordata]	[more]
KAG6751016.1	1.7e-11	85.71	hypothetical protein POTOM_045533 [Populus tomentosa]	[more]
CAN82421.1	1.7e-11	85.71	hypothetical protein VITISV_034964 [Vitis vinifera]	[more]
XP_030497511.1	1.7e-11	85.71	bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic [Cannabis s...	[more]

BLAST of MS023624 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA18	5.4e-13	79.59	Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Arabidop...	[more]
P49080	5.4e-13	79.59	Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic OS=Zea mays...	[more]
P37142	7.0e-13	79.59	Bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic (Fragment) OS...	[more]
P49079	9.2e-13	79.59	Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Zea mays...	[more]
O81852	1.6e-12	81.25	Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic OS=Arabidop...	[more]

BLAST of MS023624 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I7L5	8.1e-12	85.71	Aspartokinase OS=Cucurbita maxima OX=3661 GN=LOC111472020 PE=3 SV=1	[more]
A0A6J1ID49	8.1e-12	85.71	Aspartokinase OS=Cucurbita maxima OX=3661 GN=LOC111472020 PE=3 SV=1	[more]
A0A2G5CAY0	8.1e-12	85.71	Aspartokinase OS=Aquilegia coerulea OX=218851 GN=AQUCO_07400096v1 PE=3 SV=1	[more]
A0A438HEP1	8.1e-12	85.71	Homoserine dehydrogenase OS=Vitis vinifera OX=29760 GN=AKHSDH1_0 PE=3 SV=1	[more]
A5APD8	8.1e-12	85.71	Aspartokinase OS=Vitis vinifera OX=29760 GN=VITISV_034964 PE=3 SV=1	[more]

BLAST of MS023624 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31230.1	3.8e-14	79.59	aspartate kinase-homoserine dehydrogenase i	[more]
AT4G19710.1	1.1e-13	81.25	aspartate kinase-homoserine dehydrogenase ii	[more]
AT4G19710.2	1.1e-13	81.25	aspartate kinase-homoserine dehydrogenase ii	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 1..48 e-value: 3.3E-6 score: 29.4
None	No IPR available	PANTHER	PTHR43070:SF8	ASPARTOKINASE-HOMOSERINE DEHYDROGENASE	coord: 1..48
IPR011147	Bifunctional aspartokinase/homoserine dehydrogenase I	PANTHER	PTHR43070	FAMILY NOT NAMED	coord: 1..48

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023624.1	MS023624.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009067	aspartate family amino acid biosynthetic process
molecular_function	GO:0004072	aspartate kinase activity
molecular_function	GO:0004412	homoserine dehydrogenase activity