MS023581 (gene) Bitter gourd (TR) v1

Overview
NameMS023581
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytochrome P450 78A7
Locationscaffold1258: 386538 .. 386630 (+)
RNA-Seq ExpressionMS023581
SyntenyMS023581
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTGCTTGGAGAAACGGGAGGAACCAAATGGGTCAGGTTCCCATCCCTATCCCTCATGGCCTTTCAATTTTCGACAGTTTATTCACTCTCACC

mRNA sequence

TCTGCTTGGAGAAACGGGAGGAACCAAATGGGTCAGGTTCCCATCCCTATCCCTCATGGCCTTTCAATTTTCGACAGTTTATTCACTCTCACC

Coding sequence (CDS)

TCTGCTTGGAGAAACGGGAGGAACCAAATGGGTCAGGTTCCCATCCCTATCCCTCATGGCCTTTCAATTTTCGACAGTTTATTCACTCTCACC

Protein sequence

SAWRNGRNQMGQVPIPIPHGLSIFDSLFTLT
Homology
[Close]
BLAST of MS023581 vs. NCBI nr
Match: KAE8100336.1 (hypothetical protein FH972_018243 [Carpinus fangiana])

HSP 1 Score: 52.8 bits (125), Expect = 6.3e-04
Identity = 22/30 (73.33%), Postives = 26/30 (86.67%), Query Frame = 0 

Query: 2  AWRNGRNQMGQVPIPIPHGLSIFDSLFTLT 32
          AW++GRNQMGQVPIP P GL +F SLFTL+
Sbjct: 53 AWKDGRNQMGQVPIPGPRGLPLFGSLFTLS 82

[Close]
BLAST of MS023581 vs. NCBI nr
Match: KAE8100337.1 (hypothetical protein FH972_018244 [Carpinus fangiana])

HSP 1 Score: 52.8 bits (125), Expect = 6.3e-04
Identity = 22/30 (73.33%), Postives = 26/30 (86.67%), Query Frame = 0 

Query: 2  AWRNGRNQMGQVPIPIPHGLSIFDSLFTLT 32
          AW++GRNQMGQVPIP P GL +F SLFTL+
Sbjct: 53 AWKDGRNQMGQVPIPGPRGLPLFGSLFTLS 82

[Close]
BLAST of MS023581 vs. NCBI nr
Match: KNA07723.1 (hypothetical protein SOVF_169250 [Spinacia oleracea])

HSP 1 Score: 52.4 bits (124), Expect = 8.3e-04
Identity = 22/30 (73.33%), Postives = 25/30 (83.33%), Query Frame = 0 

Query: 2  AWRNGRNQMGQVPIPIPHGLSIFDSLFTLT 32
          AW+NGRNQMGQVPIP P GL +  SLFTL+
Sbjct: 44 AWKNGRNQMGQVPIPGPRGLVVMGSLFTLS 73

[Close]
BLAST of MS023581 vs. NCBI nr
Match: XP_021856993.1 (cytochrome P450 78A7 [Spinacia oleracea])

HSP 1 Score: 52.4 bits (124), Expect = 8.3e-04
Identity = 22/30 (73.33%), Postives = 25/30 (83.33%), Query Frame = 0 

Query: 2  AWRNGRNQMGQVPIPIPHGLSIFDSLFTLT 32
          AW+NGRNQMGQVPIP P GL +  SLFTL+
Sbjct: 63 AWKNGRNQMGQVPIPGPRGLVVMGSLFTLS 92

[Close]
BLAST of MS023581 vs. ExPASy Swiss-Prot
Match: Q9FIB0 (Cytochrome P450 78A7 OS=Arabidopsis thaliana OX=3702 GN=CYP78A7 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 4.6e-05
Identity = 18/30 (60.00%), Postives = 25/30 (83.33%), Query Frame = 0 

Query: 2  AWRNGRNQMGQVPIPIPHGLSIFDSLFTLT 32
          AW+NGRN++G+V IP P G+ +F SLFTL+
Sbjct: 57 AWKNGRNRLGRVAIPGPRGIPVFGSLFTLS 86

[Close]
BLAST of MS023581 vs. ExPASy TrEMBL
Match: A0A5N6RPS3 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_018243 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.1e-04
Identity = 22/30 (73.33%), Postives = 26/30 (86.67%), Query Frame = 0 

Query: 2  AWRNGRNQMGQVPIPIPHGLSIFDSLFTLT 32
          AW++GRNQMGQVPIP P GL +F SLFTL+
Sbjct: 53 AWKDGRNQMGQVPIPGPRGLPLFGSLFTLS 82

[Close]
BLAST of MS023581 vs. ExPASy TrEMBL
Match: A0A5N6RPF2 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_018244 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.1e-04
Identity = 22/30 (73.33%), Postives = 26/30 (86.67%), Query Frame = 0 

Query: 2  AWRNGRNQMGQVPIPIPHGLSIFDSLFTLT 32
          AW++GRNQMGQVPIP P GL +F SLFTL+
Sbjct: 53 AWKDGRNQMGQVPIPGPRGLPLFGSLFTLS 82

[Close]
BLAST of MS023581 vs. ExPASy TrEMBL
Match: A0A0K9QM12 (Uncharacterized protein OS=Spinacia oleracea OX=3562 GN=SOVF_169250 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.0e-04
Identity = 22/30 (73.33%), Postives = 25/30 (83.33%), Query Frame = 0 

Query: 2  AWRNGRNQMGQVPIPIPHGLSIFDSLFTLT 32
          AW+NGRNQMGQVPIP P GL +  SLFTL+
Sbjct: 44 AWKNGRNQMGQVPIPGPRGLVVMGSLFTLS 73

[Close]
BLAST of MS023581 vs. ExPASy TrEMBL
Match: A0A061FL70 (Cytochrome P450, family 78, subfamily A, polypeptide 7 OS=Theobroma cacao OX=3641 GN=TCM_036597 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 5.2e-04
Identity = 21/30 (70.00%), Postives = 26/30 (86.67%), Query Frame = 0 

Query: 2  AWRNGRNQMGQVPIPIPHGLSIFDSLFTLT 32
          AW+NGRNQ+GQVPIP P GL +F SLF+L+
Sbjct: 55 AWKNGRNQLGQVPIPGPRGLPLFGSLFSLS 84

[Close]
BLAST of MS023581 vs. ExPASy TrEMBL
Match: A0A371F5S3 (Cytochrome P450 78A7 (Fragment) OS=Mucuna pruriens OX=157652 GN=CYP78A7 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 5.2e-04
Identity = 22/30 (73.33%), Postives = 26/30 (86.67%), Query Frame = 0 

Query: 1  SAWRNGRNQMGQVPIPIPHGLSIFDSLFTL 31
          +AWRNGRNQMG+VPIP P+GL IF  LF+L
Sbjct: 55 TAWRNGRNQMGRVPIPGPNGLPIFGLLFSL 84

[Close]
BLAST of MS023581 vs. TAIR 10
Match: AT5G09970.1 (cytochrome P450, family 78, subfamily A, polypeptide 7 )

HSP 1 Score: 47.0 bits (110), Expect = 3.2e-06
Identity = 18/30 (60.00%), Postives = 25/30 (83.33%), Query Frame = 0 

Query: 2  AWRNGRNQMGQVPIPIPHGLSIFDSLFTLT 32
          AW+NGRN++G+V IP P G+ +F SLFTL+
Sbjct: 57 AWKNGRNRLGRVAIPGPRGIPVFGSLFTLS 86

The following BLAST results are available for this feature:
BLAST of MS023581 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8100336.16.3e-0473.33hypothetical protein FH972_018243 [Carpinus fangiana][more]
KAE8100337.16.3e-0473.33hypothetical protein FH972_018244 [Carpinus fangiana][more]
KNA07723.18.3e-0473.33hypothetical protein SOVF_169250 [Spinacia oleracea][more]
XP_021856993.18.3e-0473.33cytochrome P450 78A7 [Spinacia oleracea][more]
BLAST of MS023581 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FIB04.6e-0560.00Cytochrome P450 78A7 OS=Arabidopsis thaliana OX=3702 GN=CYP78A7 PE=2 SV=1[more]
BLAST of MS023581 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5N6RPS33.1e-0473.33Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_018243 PE=4 SV=1[more]
A0A5N6RPF23.1e-0473.33Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_018244 PE=3 SV=1[more]
A0A0K9QM124.0e-0473.33Uncharacterized protein OS=Spinacia oleracea OX=3562 GN=SOVF_169250 PE=3 SV=1[more]
A0A061FL705.2e-0470.00Cytochrome P450, family 78, subfamily A, polypeptide 7 OS=Theobroma cacao OX=364... [more]
A0A371F5S35.2e-0473.33Cytochrome P450 78A7 (Fragment) OS=Mucuna pruriens OX=157652 GN=CYP78A7 PE=3 SV=... [more]
BLAST of MS023581 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G09970.13.2e-0660.00cytochrome P450, family 78, subfamily A, polypeptide 7 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS023581.1MS023581.1mRNA