MS023562 (gene) Bitter gourd (TR) v1

Overview


Name	MS023562
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RING-H2 finger protein ATL63-like
Location	scaffold1258: 129449 .. 130185 (-)
RNA-Seq Expression	MS023562
Synteny	MS023562

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCCGTCTCGAGTTCACTCACCGAGTTCGCTCAGAGCATTTTCTCCTACAACACCAACATCATGCTCGCCGCCCTCATTTCTCTCCTTCTCGTCGTCCTCTTCGTCCTCCTCCTCCACGCCTACGCCAAATGCTTCTTCCCCCANACCCCCGCCCCCGCCGCCGCCGCACCCGCCGGAGCTCCGTCGCCGTCTCCTACCTCCTCCACCCCTCCCGCCTCTCTCTCTTCGACCTCGCCGGCGCTCCCCCATCCAAGGGCCTCGACCCCGCCGCAATCTCCAAGATTCCTCTGTTCGTTTACGGATCGGAGACGCCGCATGCGGCGGCGCCGATGGAGGAGTGCGCCATTTGCTTGAGCGAATTCGAGGACCGGGAGCTCGGTCGCCGCCTCCCCAAATGCAGCCATGGATTCCACCTCGAGTGTATCGATATGTGGCTCGATTCGCACGCCAATTGCCCTGTTTGTAGAGCTCCGGTGGTCTGCGACGCCGCGAATTGTCCCGACGCGGCGGAATCCGGCCGCGCTGGGGGAATTGGACCGGAAACGGACCGGAATTGTGAGATTCAGAGCAATGAGGGGCAAAATGGTCAATCTCTTCCTTCTTCTTCTTCTTCGAGTTCTTCGTTTGATCCGCCATTGATGTCGCTTGGAGCATCTCTGAAGCGAATGCTGAGCAAGAACGTATCAGAGGGGAGGATCTTCCCCTCCTCCAATGGCGTCGAATTGGATGTT

mRNA sequence

ATGGCGTCCGTCTCGAGTTCACTCACCGAGTTCGCTCAGAGCATTTTCTCCTACAACACCAACATCATGCTCGCCGCCCTCATTTCTCTCCTTCTCGTCGTCCTCTTCGTCCTCCTCCTCCACGCCTACGCCAAATGCTTCTTCCCCCCCCGCCCCCGCCGCCGCCGCACCCGCCGGAGCTCCGTCGCCGTCTCCTACCTCCTCCACCCCTCCCGCCTCTCTCTCTTCGACCTCGCCGGCGCTCCCCCATCCAAGGGCCTCGACCCCGCCGCAATCTCCAAGATTCCTCTGTTCGTTTACGGATCGGAGACGCCGCATGCGGCGGCGCCGATGGAGGAGTGCGCCATTTGCTTGAGCGAATTCGAGGACCGGGAGCTCGGTCGCCGCCTCCCCAAATGCAGCCATGGATTCCACCTCGAGTGTATCGATATGTGGCTCGATTCGCACGCCAATTGCCCTGTTTGTAGAGCTCCGGTGGTCTGCGACGCCGCGAATTGTCCCGACGCGGCGGAATCCGGCCGCGCTGGGGGAATTGGACCGGAAACGGACCGGAATTGTGAGATTCAGAGCAATGAGGGGCAAAATGGTCAATCTCTTCCTTCTTCTTCTTCTTCGAGTTCTTCGTTTGATCCGCCATTGATGTCGCTTGGAGCATCTCTGAAGCGAATGCTGAGCAAGAACGTATCAGAGGGGAGGATCTTCCCCTCCTCCAATGGCGTCGAATTGGATGTT

Coding sequence (CDS)

ATGGCGTCCGTCTCGAGTTCACTCACCGAGTTCGCTCAGAGCATTTTCTCCTACAACACCAACATCATGCTCGCCGCCCTCATTTCTCTCCTTCTCGTCGTCCTCTTCGTCCTCCTCCTCCACGCCTACGCCAAATGCTTCTTCCCCCCCCGCCCCCGCCGCCGCCGCACCCGCCGGAGCTCCGTCGCCGTCTCCTACCTCCTCCACCCCTCCCGCCTCTCTCTCTTCGACCTCGCCGGCGCTCCCCCATCCAAGGGCCTCGACCCCGCCGCAATCTCCAAGATTCCTCTGTTCGTTTACGGATCGGAGACGCCGCATGCGGCGGCGCCGATGGAGGAGTGCGCCATTTGCTTGAGCGAATTCGAGGACCGGGAGCTCGGTCGCCGCCTCCCCAAATGCAGCCATGGATTCCACCTCGAGTGTATCGATATGTGGCTCGATTCGCACGCCAATTGCCCTGTTTGTAGAGCTCCGGTGGTCTGCGACGCCGCGAATTGTCCCGACGCGGCGGAATCCGGCCGCGCTGGGGGAATTGGACCGGAAACGGACCGGAATTGTGAGATTCAGAGCAATGAGGGGCAAAATGGTCAATCTCTTCCTTCTTCTTCTTCTTCGAGTTCTTCGTTTGATCCGCCATTGATGTCGCTTGGAGCATCTCTGAAGCGAATGCTGAGCAAGAACGTATCAGAGGGGAGGATCTTCCCCTCCTCCAATGGCGTCGAATTGGATGTT

Protein sequence

MASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPPRPRRRRTRRSSVAVSYLLHPSRLSLFDLAGAPPSKGLDPAAISKIPLFVYGSETPHAAAPMEECAICLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAGGIGPETDRNCEIQSNEGQNGQSLPSSSSSSSSFDPPLMSLGASLKRMLSKNVSEGRIFPSSNGVELDV

Homology

[Close]

BLAST of MS023562 vs. NCBI nr
Match: XP_038895413.1 (RING-H2 finger protein ATL63 [Benincasa hispida])

HSP 1 Score: 310.8 bits (795), Expect = 1.0e-80
Identity = 181/256 (70.70%), Postives = 198/256 (77.34%), Query Frame = 0


Query: 1   MASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPPRPRRRRTRRS 60
           M S S+SL +FAQSIFSYN+NIMLAALISLLLVVLFVLLLHAYA CFF P PR R   R+
Sbjct: 1   MGSNSTSLIDFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFF-PHPRYRHRHRT 60

Query: 61  SVAVSYLLHPSRLSLFDLA-----GAPPSKGLDPAAISKIPLFVYGSETPHAAAPMEECA 120
           S+ VSY+L P RLS FD +      + PSKGLDP+ IS IPLFVY SE    AA M EC 
Sbjct: 61  SLTVSYILAPPRLSRFDSSVPFDLVSAPSKGLDPSVISAIPLFVYESEEKKCAAAM-ECV 120

Query: 121 ICLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESG-- 180
           ICLSEFE+RELGRRLPKCSHGFHLECIDMWL+SHANCPVCR PV+ +AA+C DAAESG  
Sbjct: 121 ICLSEFEERELGRRLPKCSHGFHLECIDMWLNSHANCPVCREPVIGEAADCSDAAESGER 180

Query: 181 RAGG----IGPETDRNCEIQSNEGQNGQSLPSSSSSSSSFDPPLMSLGASLKRMLSKNVS 240
             GG    +  E   NCEIQ NEGQNGQ   S SSSSSS DPPLMSLGASL RMLS+N S
Sbjct: 181 EIGGEIVNVMEERSNNCEIQRNEGQNGQ-FNSDSSSSSSIDPPLMSLGASLMRMLSRNRS 240

Query: 241 EGRIFPSSNG-VELDV 245
           +GRIFPSSNG  ELDV
Sbjct: 241 DGRIFPSSNGEEELDV 253

[Close]

BLAST of MS023562 vs. NCBI nr
Match: XP_023519269.1 (RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.5 bits (794), Expect = 1.3e-80
Identity = 185/268 (69.03%), Postives = 200/268 (74.63%), Query Frame = 0


Query: 1   MASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPPRPRRRRTRRS 60
           MA  S+SL  FAQS+FSYN+NIMLAALISLLLVVLFVLLLHAYA CFF P+PR RRT   
Sbjct: 1   MAFNSTSLIGFAQSVFSYNSNIMLAALISLLLVVLFVLLLHAYANCFF-PQPRHRRT--- 60

Query: 61  SVAVSYLLHPSRLSLFDL----AGAPPSKGLDPAAISKIPLFVYGSETPHAAAPMEECAI 120
           SV VSY+L P RLS FD     +GA PSKGLDP+ IS IPLFVY SE    AA M EC I
Sbjct: 61  SVTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVM-ECVI 120

Query: 121 CLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAG 180
           CLSEFE+RELGRRLPKCSHGFHLECIDMWL+SHA+CPVCRAPV+ DA +C DA ESGR  
Sbjct: 121 CLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDATDCSDAVESGRLS 180

Query: 181 G-------IGPETDRNCEIQSNEGQNGQ-------------SLPSSSSSSSSFDPPLMSL 240
           G       I  E  RNCEIQ NEGQNGQ             S  S SSSSSS D PLMSL
Sbjct: 181 GEREIGGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSLSSSSSSTDQPLMSL 240

Query: 241 GASLKRMLSKNVSEGRIFPSSNGVELDV 245
           GASLKRMLS+N S+GRIFPSS+G ELDV
Sbjct: 241 GASLKRMLSRNRSDGRIFPSSDGDELDV 263

[Close]

BLAST of MS023562 vs. NCBI nr
Match: XP_022964854.1 (RING-H2 finger protein ATL63-like [Cucurbita moschata])

HSP 1 Score: 310.5 bits (794), Expect = 1.3e-80
Identity = 187/273 (68.50%), Postives = 201/273 (73.63%), Query Frame = 0


Query: 1   MASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPPRPRRRRTRRS 60
           MA  S+SL  FAQSIFSYN+NIMLAALISLLLVVLFVLLLHAYA CFF P+PR RRT   
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFF-PQPRHRRT--- 60

Query: 61  SVAVSYLLHPSRLSLFDL----AGAPPSKGLDPAAISKIPLFVYGSETPHAAAPMEECAI 120
           SV VSY+L P RLS FD     +GA PSKGLDP+ IS IPLFVY SE    AA M EC I
Sbjct: 61  SVTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVM-ECVI 120

Query: 121 CLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAG 180
           CLSEFE+RELGRRLPKCSHGFHLECIDMWL+SHA+CPVCRAPV+ DAA+C DA ESGR  
Sbjct: 121 CLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLS 180

Query: 181 G-------IGPETDRNCEIQSNEGQNGQ------------------SLPSSSSSSSSFDP 240
           G       I  E  RNCEIQ NEGQNGQ                  S  S SSSSSS D 
Sbjct: 181 GEREIGGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQ 240

Query: 241 PLMSLGASLKRMLSKNVSEGRIFPSSNGVELDV 245
           PLMSLGASLKRMLS+N S+GRIFPSS+G ELDV
Sbjct: 241 PLMSLGASLKRMLSRNRSDGRIFPSSDGDELDV 268

[Close]

BLAST of MS023562 vs. NCBI nr
Match: XP_022970592.1 (RING-H2 finger protein ATL63-like [Cucurbita maxima])

HSP 1 Score: 310.1 bits (793), Expect = 1.7e-80
Identity = 185/264 (70.08%), Postives = 199/264 (75.38%), Query Frame = 0


Query: 1   MASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPPRPRRRRTRRS 60
           MA  S+SL  FAQSIFSYN+NIMLAALISLLLVVLFVLLLHAYA CFF P+PR RRT   
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFF-PQPRHRRT--- 60

Query: 61  SVAVSYLLHPSRLSLFDL----AGAPPSKGLDPAAISKIPLFVYGSETPHAAAPMEECAI 120
           SV VSY+L P RLS FD     +GA PSKGLDP+ IS IPLFVY SE     A M EC I
Sbjct: 61  SVTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVM-ECVI 120

Query: 121 CLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAG 180
           CLSEFE+RELGRRLPKCSHGFHLECIDMWL+SHA+CPVCRAPV+ DAA+C DA ESGR  
Sbjct: 121 CLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLS 180

Query: 181 G-------IGPETDRNCEIQSNEGQNGQ---------SLPSSSSSSSSFDPPLMSLGASL 240
           G       I  E   NCEIQ NEGQNGQ         S  S SSSSSS D PLMSLGASL
Sbjct: 181 GEREIGGEIVTEERSNCEIQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQPLMSLGASL 240

Query: 241 KRMLSKNVSEGRIFPSSNGVELDV 245
           KRMLS+N S+GRIFPSS+G ELDV
Sbjct: 241 KRMLSRNRSDGRIFPSSDGDELDV 259

[Close]

BLAST of MS023562 vs. NCBI nr
Match: KAG6583350.1 (RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 306.2 bits (783), Expect = 2.5e-79
Identity = 186/277 (67.15%), Postives = 200/277 (72.20%), Query Frame = 0


Query: 1   MASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPPRPRRRRTRRS 60
           MA  S+SL  FAQSIFSYN+NIMLAALISLLLVVLFVLLLHAYA CFF P+PR RRT   
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFF-PQPRHRRT--- 60

Query: 61  SVAVSYLLHPSRLSLFDL----AGAPPSKGLDPAAISKIPLFVYGSETPHAAAPMEECAI 120
           SV VSY+L P RLS FD     +GA PSKGLDP+ IS IPLFVY SE    AA M EC I
Sbjct: 61  SVTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVM-ECVI 120

Query: 121 CLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAG 180
           CLSEFE+RELGRRLPKCSHGFHLECIDMWL+SHA+CPVCRAPV+ DAA+C DA ES R  
Sbjct: 121 CLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESDRLS 180

Query: 181 G-------IGPETDRNCEIQSNEGQNGQ----------------------SLPSSSSSSS 240
           G       I  E  RNCEIQ NEGQNGQ                      S  S SSSSS
Sbjct: 181 GEREIGGEIVTEERRNCEIQRNEGQNGQFHSDSSSSSSSSSSSSSSSSSSSSSSLSSSSS 240

Query: 241 SFDPPLMSLGASLKRMLSKNVSEGRIFPSSNGVELDV 245
           S D PLMSLGASLKRMLS+N S+GRIFPSS+G ELDV
Sbjct: 241 STDQPLMSLGASLKRMLSRNRSDGRIFPSSDGDELDV 272

[Close]

BLAST of MS023562 vs. ExPASy Swiss-Prot
Match: Q9LUZ9 (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.1e-34
Identity = 85/176 (48.30%), Postives = 109/176 (61.93%), Query Frame = 0


Query: 3   SVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPP-----------R 62
           SV SSL+ F + + SYN+N++LAAL+ LLLVVLFVLLLH YA+ F+ P           R
Sbjct: 10  SVKSSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHR 69

Query: 63  PRRRRTRRSSVAVSYLLHPSRLSLFDLAGAPPS-------KGLDPAAISKIPLFVYGSET 122
            RRRR RR +V  + ++    L  FD   + P+       KGLD + IS IPLFVY  E 
Sbjct: 70  RRRRRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVY-EEN 129

Query: 123 PHAAAPMEECAICLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVV 161
                  EEC ICL  +E  + GR+L  C HGFH+ECIDMWL SH+ CP+CR+PV+
Sbjct: 130 EEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVL 184

[Close]

BLAST of MS023562 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.0e-26
Identity = 62/144 (43.06%), Postives = 86/144 (59.72%), Query Frame = 0


Query: 16  FSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPPRPRRRRTRRSSVAVSYLLHPSRLSL 75
           ++ N  IML+++I L + V+ +L  H+YA+  F  R   RR RR            R  L
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLF--RRHNRRIRRR----------IRSHL 81

Query: 76  FDLAGAPPSKGLDPAAISKIPLFVYGSETPHAAAPMEECAICLSEFEDRELGRRLPKCSH 135
             L+ +P  + LD A + KIP+FVY S+ P      EEC++CLSEFE+ + GR LPKC H
Sbjct: 82  RTLSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGH 141

Query: 136 GFHLECIDMWLDSHANCPVCRAPV 160
            FH++CID W  S + CP+CRAPV
Sbjct: 142 SFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]

BLAST of MS023562 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-24
Identity = 75/193 (38.86%), Postives = 105/193 (54.40%), Query Frame = 0


Query: 14  SIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPPRPRRRRTRRSSVAVSYLLHPSRL 73
           S +S N  IMLA++I L + V+ +L  H+YA+  F  R + RR RR   A    L  +R 
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLF--RRQNRRIRRRISAHLRSLAAARD 79

Query: 74  SLFDLAGAPPSKGLDPAAISKIPLFVYGSETPHAAAPMEECAICLSEFEDRELGRRLPKC 133
                +   P   LDP  + KIP+FVY  +T    +P+EEC++CLSEFE+ + GR LPKC
Sbjct: 80  PTQSSSSLSP---LDPTVLEKIPIFVYSVKTHE--SPLEECSVCLSEFEEDDEGRVLPKC 139

Query: 134 SHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAGGIGPETDRNCEIQSNEG 193
            H FH++CID W  S ++CP+CRAPV            +     + P  D      S+  
Sbjct: 140 GHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTEAGSSSSSD 199

Query: 194 QNGQSLPSSSSSS 207
           ++  S PSSSS S
Sbjct: 200 ESESSTPSSSSGS 205

[Close]

BLAST of MS023562 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 2.2e-22
Identity = 73/196 (37.24%), Postives = 103/196 (52.55%), Query Frame = 0


Query: 16  FSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPPRPRRRRTRRSS-----VAVSYLLHP 75
           ++ +  IML+A++ L  VV+ ++ LH YA+ ++  R RRR  RR S       V +   P
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYAR-WYLLRARRRHLRRRSRNRRATMVFFTADP 83

Query: 76  SRLSLFDLAGAPPSKGLDPAAISKIPLFVYGSETPHAAAPMEECAICLSEFEDRELGRRL 135
           S  +   +A    S+GLDP  I  +P+F +  ET        ECA+CLSEFE+ E GR L
Sbjct: 84  STAATSVVA----SRGLDPNVIKSLPVFTFSDETHKDPI---ECAVCLSEFEESETGRVL 143

Query: 136 PKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAGGIGPETDRNCEIQS 195
           P C H FH++CIDMW  SH+ CP+CR+ V   A     AA   R   I  ++D    I+ 
Sbjct: 144 PNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEP 203

Query: 196 NEGQNGQSLPSSSSSS 207
           +        P  S SS
Sbjct: 204 SSSSGLTDEPHGSGSS 211

[Close]

BLAST of MS023562 vs. ExPASy Swiss-Prot
Match: Q9SLC3 (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.5e-18
Identity = 73/220 (33.18%), Postives = 109/220 (49.55%), Query Frame = 0


Query: 14  SIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPPRPRRRRTRRSSVAVSYLLHPSRL 73
           S +  N+ IMLAA+ SL  V+L V  LH YA+       RRRR     + V +  HP  +
Sbjct: 23  STYDLNSKIMLAAVASLSGVILIVFALHLYARFVL----RRRREAFRGLPVIF-RHPFEM 82

Query: 74  SLFDLAGAPPSKGLDPAAISKIPLFVYGSETPHAAAPMEECAICLSEFEDRELGRRLPKC 133
                    P +GL+P  I+ +P F  G+ T   AA   ECA+CLS  ++++  R LP C
Sbjct: 83  ---------PKRGLNPTVIASLPTFTVGA-TDGVAASATECAVCLSVLKEQDKARELPNC 142

Query: 134 SHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAGGIGPETDRNCEIQSNEG 193
            H FH++C+D WL + + CPVCR  V       P      R G +G  T     +++   
Sbjct: 143 KHIFHVDCVDTWLTTCSTCPVCRTEV----EPRPRLEPEPREGPVG--TAPQLLVETRLN 202

Query: 194 QNGQSLPSSSSSSSSFDPPLMSLGASLKRMLSKNVSEGRI 234
              ++  SSSS + +   P   L  S +++L++  S  RI
Sbjct: 203 LTVEAASSSSSDNKTVVSPASRLN-SFRKILTRERSSNRI 220

[Close]

BLAST of MS023562 vs. ExPASy TrEMBL
Match: A0A6J1HPE0 (RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111464835 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 6.4e-81
Identity = 187/273 (68.50%), Postives = 201/273 (73.63%), Query Frame = 0


Query: 1   MASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPPRPRRRRTRRS 60
           MA  S+SL  FAQSIFSYN+NIMLAALISLLLVVLFVLLLHAYA CFF P+PR RRT   
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFF-PQPRHRRT--- 60

Query: 61  SVAVSYLLHPSRLSLFDL----AGAPPSKGLDPAAISKIPLFVYGSETPHAAAPMEECAI 120
           SV VSY+L P RLS FD     +GA PSKGLDP+ IS IPLFVY SE    AA M EC I
Sbjct: 61  SVTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCAAVM-ECVI 120

Query: 121 CLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAG 180
           CLSEFE+RELGRRLPKCSHGFHLECIDMWL+SHA+CPVCRAPV+ DAA+C DA ESGR  
Sbjct: 121 CLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLS 180

Query: 181 G-------IGPETDRNCEIQSNEGQNGQ------------------SLPSSSSSSSSFDP 240
           G       I  E  RNCEIQ NEGQNGQ                  S  S SSSSSS D 
Sbjct: 181 GEREIGGEIVTEERRNCEIQRNEGQNGQFHSSSSSSSSSSSSSSSSSSSSLSSSSSSTDQ 240

Query: 241 PLMSLGASLKRMLSKNVSEGRIFPSSNGVELDV 245
           PLMSLGASLKRMLS+N S+GRIFPSS+G ELDV
Sbjct: 241 PLMSLGASLKRMLSRNRSDGRIFPSSDGDELDV 268

[Close]

BLAST of MS023562 vs. ExPASy TrEMBL
Match: A0A6J1HZJ3 (RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111469533 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 8.4e-81
Identity = 185/264 (70.08%), Postives = 199/264 (75.38%), Query Frame = 0


Query: 1   MASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPPRPRRRRTRRS 60
           MA  S+SL  FAQSIFSYN+NIMLAALISLLLVVLFVLLLHAYA CFF P+PR RRT   
Sbjct: 1   MAFNSTSLIGFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFF-PQPRHRRT--- 60

Query: 61  SVAVSYLLHPSRLSLFDL----AGAPPSKGLDPAAISKIPLFVYGSETPHAAAPMEECAI 120
           SV VSY+L P RLS FD     +GA PSKGLDP+ IS IPLFVY SE     A M EC I
Sbjct: 61  SVTVSYVLGPPRLSRFDSVPFDSGAAPSKGLDPSVISAIPLFVYESEEKKCTAVM-ECVI 120

Query: 121 CLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAG 180
           CLSEFE+RELGRRLPKCSHGFHLECIDMWL+SHA+CPVCRAPV+ DAA+C DA ESGR  
Sbjct: 121 CLSEFEERELGRRLPKCSHGFHLECIDMWLNSHASCPVCRAPVLGDAADCSDAVESGRLS 180

Query: 181 G-------IGPETDRNCEIQSNEGQNGQ---------SLPSSSSSSSSFDPPLMSLGASL 240
           G       I  E   NCEIQ NEGQNGQ         S  S SSSSSS D PLMSLGASL
Sbjct: 181 GEREIGGEIVTEERSNCEIQRNEGQNGQFYSDSSSSSSSSSLSSSSSSTDQPLMSLGASL 240

Query: 241 KRMLSKNVSEGRIFPSSNGVELDV 245
           KRMLS+N S+GRIFPSS+G ELDV
Sbjct: 241 KRMLSRNRSDGRIFPSSDGDELDV 259

[Close]

BLAST of MS023562 vs. ExPASy TrEMBL
Match: A0A6J1GBH1 (RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111452651 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 4.8e-76
Identity = 173/255 (67.84%), Postives = 190/255 (74.51%), Query Frame = 0


Query: 1   MASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPPRPRRRRTRRS 60
           MA  S+SL++F QSIFSYN+N++LAALISLLLVVLFVLLLHAYA CFF PRPR R  +RS
Sbjct: 1   MAFNSTSLSDFTQSIFSYNSNVILAALISLLLVVLFVLLLHAYANCFF-PRPRHRHAQRS 60

Query: 61  SVAVSYLLHPSRLSLFDL----AGAPPSKGLDPAAISKIPLFVYGSETPHAAAPMEECAI 120
           SV VSY+L P RLS F+      G   SKGLD + IS IPLFVY SE    A  M EC I
Sbjct: 61  SVTVSYVLGPPRLSRFESIPFDLGFAQSKGLDSSVISAIPLFVYESEEKKCATVM-ECVI 120

Query: 121 CLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAG 180
           CLSEFE+RE+GRRLP C+HGFHLECIDMWL+SHANCPVCRAPVV       +A ESGR  
Sbjct: 121 CLSEFEEREIGRRLPICNHGFHLECIDMWLNSHANCPVCRAPVVA------EAVESGRLS 180

Query: 181 G-------IGPETDRNCEIQSNEGQNGQSLPSSSSSSSSFDPPLMSLGASLKRMLSKNVS 240
           G       I  E   NCEIQ NE QNGQ   SSSSSSSS DPPLMSLGASLKRMLS+N S
Sbjct: 181 GEREIGEEIVTEERTNCEIQRNEEQNGQFHSSSSSSSSSTDPPLMSLGASLKRMLSRNRS 240

Query: 241 EGRIFPSSNGVELDV 245
            GRIFPSSNG EL+V
Sbjct: 241 NGRIFPSSNGDELNV 247

[Close]

BLAST of MS023562 vs. ExPASy TrEMBL
Match: A0A1S3C6K6 (RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497058 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.4e-75
Identity = 174/249 (69.88%), Postives = 192/249 (77.11%), Query Frame = 0


Query: 2   ASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPPRPRRRRTRRSS 61
           +S S+SLT+FAQSIFSYN+NIMLAALISLLLVVLFVLLLHAYA CFF P PR R  RR+S
Sbjct: 3   SSNSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFF-PHPRHR--RRTS 62

Query: 62  VAVSYLLHPSRLSLFDLA-----GAPPSKGLDPAAISKIPLFVYGSETPHAAAPMEECAI 121
           V VSY+L P RLS FD       G+ PSKGLDP+ IS IPLFVY SE    AA M EC I
Sbjct: 63  VTVSYVLAPPRLSRFDSVVPFDLGSAPSKGLDPSVISAIPLFVYESEEKKCAATM-ECVI 122

Query: 122 CLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAG 181
           CLSEFE+RELGRRLPKC HGFHLECIDMWL+SHANCPVCR PV+ +A +C DAAESG  G
Sbjct: 123 CLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESGE-G 182

Query: 182 GIGPETDRNCEIQSNEGQNGQSLPSSSSSSSSFDPPLM-SLGASLKRMLSKNVSEGRIFP 241
            IG ET        NEGQ+GQ    SSSSSS   PPLM S+GASL R+LS+N S+GRIFP
Sbjct: 183 EIGRET-------VNEGQSGQFNSDSSSSSSIDPPPLMSSIGASLIRILSRNRSDGRIFP 239

Query: 242 SSNGVELDV 245
           SSNG ELDV
Sbjct: 243 SSNGEELDV 239

[Close]

BLAST of MS023562 vs. ExPASy TrEMBL
Match: A0A5A7UXS2 (RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold340G00740 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.4e-75
Identity = 174/249 (69.88%), Postives = 192/249 (77.11%), Query Frame = 0


Query: 2   ASVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPPRPRRRRTRRSS 61
           +S S+SLT+FAQSIFSYN+NIMLAALISLLLVVLFVLLLHAYA CFF P PR R  RR+S
Sbjct: 3   SSNSTSLTQFAQSIFSYNSNIMLAALISLLLVVLFVLLLHAYANCFF-PHPRHR--RRTS 62

Query: 62  VAVSYLLHPSRLSLFDLA-----GAPPSKGLDPAAISKIPLFVYGSETPHAAAPMEECAI 121
           V VSY+L P RLS FD       G+ PSKGLDP+ IS IPLFVY SE    AA M EC I
Sbjct: 63  VTVSYVLAPPRLSRFDSVVPFDLGSAPSKGLDPSVISAIPLFVYESEEKKCAAAM-ECVI 122

Query: 122 CLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAG 181
           CLSEFE+RELGRRLPKC HGFHLECIDMWL+SHANCPVCR PV+ +A +C DAAESG  G
Sbjct: 123 CLSEFEERELGRRLPKCRHGFHLECIDMWLNSHANCPVCREPVIGEAVDCSDAAESGE-G 182

Query: 182 GIGPETDRNCEIQSNEGQNGQSLPSSSSSSSSFDPPLM-SLGASLKRMLSKNVSEGRIFP 241
            IG ET        NEGQ+GQ    SSSSSS   PPLM S+GASL R+LS+N S+GRIFP
Sbjct: 183 EIGRET-------VNEGQSGQFNSDSSSSSSIDPPPLMSSIGASLIRILSRNRSDGRIFP 239

Query: 242 SSNGVELDV 245
           SSNG ELDV
Sbjct: 243 SSNGEELDV 239

[Close]

BLAST of MS023562 vs. TAIR 10
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63 )

HSP 1 Score: 148.3 bits (373), Expect = 8.1e-36
Identity = 85/176 (48.30%), Postives = 109/176 (61.93%), Query Frame = 0


Query: 3   SVSSSLTEFAQSIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPP-----------R 62
           SV SSL+ F + + SYN+N++LAAL+ LLLVVLFVLLLH YA+ F+ P           R
Sbjct: 10  SVKSSLSSFLKILSSYNSNVLLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHR 69

Query: 63  PRRRRTRRSSVAVSYLLHPSRLSLFDLAGAPPS-------KGLDPAAISKIPLFVYGSET 122
            RRRR RR +V  + ++    L  FD   + P+       KGLD + IS IPLFVY  E 
Sbjct: 70  RRRRRNRRRTVTTTRIIPSLPLGGFDDGVSSPAATATRDDKGLDSSVISSIPLFVY-EEN 129

Query: 123 PHAAAPMEECAICLSEFEDRELGRRLPKCSHGFHLECIDMWLDSHANCPVCRAPVV 161
                  EEC ICL  +E  + GR+L  C HGFH+ECIDMWL SH+ CP+CR+PV+
Sbjct: 130 EEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVL 184

[Close]

BLAST of MS023562 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-27
Identity = 62/144 (43.06%), Postives = 86/144 (59.72%), Query Frame = 0


Query: 16  FSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPPRPRRRRTRRSSVAVSYLLHPSRLSL 75
           ++ N  IML+++I L + V+ +L  H+YA+  F  R   RR RR            R  L
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLF--RRHNRRIRRR----------IRSHL 81

Query: 76  FDLAGAPPSKGLDPAAISKIPLFVYGSETPHAAAPMEECAICLSEFEDRELGRRLPKCSH 135
             L+ +P  + LD A + KIP+FVY S+ P      EEC++CLSEFE+ + GR LPKC H
Sbjct: 82  RTLSASPRDQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGH 141

Query: 136 GFHLECIDMWLDSHANCPVCRAPV 160
            FH++CID W  S + CP+CRAPV
Sbjct: 142 SFHVDCIDTWFRSRSTCPLCRAPV 153

[Close]

BLAST of MS023562 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 115.2 bits (287), Expect = 7.6e-26
Identity = 75/193 (38.86%), Postives = 105/193 (54.40%), Query Frame = 0


Query: 14  SIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPPRPRRRRTRRSSVAVSYLLHPSRL 73
           S +S N  IMLA++I L + V+ +L  H+YA+  F  R + RR RR   A    L  +R 
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLF--RRQNRRIRRRISAHLRSLAAARD 79

Query: 74  SLFDLAGAPPSKGLDPAAISKIPLFVYGSETPHAAAPMEECAICLSEFEDRELGRRLPKC 133
                +   P   LDP  + KIP+FVY  +T    +P+EEC++CLSEFE+ + GR LPKC
Sbjct: 80  PTQSSSSLSP---LDPTVLEKIPIFVYSVKTHE--SPLEECSVCLSEFEEDDEGRVLPKC 139

Query: 134 SHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAGGIGPETDRNCEIQSNEG 193
            H FH++CID W  S ++CP+CRAPV            +     + P  D      S+  
Sbjct: 140 GHVFHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTEAGSSSSSD 199

Query: 194 QNGQSLPSSSSSS 207
           ++  S PSSSS S
Sbjct: 200 ESESSTPSSSSGS 205

[Close]

BLAST of MS023562 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 107.5 bits (267), Expect = 1.6e-23
Identity = 73/196 (37.24%), Postives = 103/196 (52.55%), Query Frame = 0


Query: 16  FSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPPRPRRRRTRRSS-----VAVSYLLHP 75
           ++ +  IML+A++ L  VV+ ++ LH YA+ ++  R RRR  RR S       V +   P
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYAR-WYLLRARRRHLRRRSRNRRATMVFFTADP 83

Query: 76  SRLSLFDLAGAPPSKGLDPAAISKIPLFVYGSETPHAAAPMEECAICLSEFEDRELGRRL 135
           S  +   +A    S+GLDP  I  +P+F +  ET        ECA+CLSEFE+ E GR L
Sbjct: 84  STAATSVVA----SRGLDPNVIKSLPVFTFSDETHKDPI---ECAVCLSEFEESETGRVL 143

Query: 136 PKCSHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAGGIGPETDRNCEIQS 195
           P C H FH++CIDMW  SH+ CP+CR+ V   A     AA   R   I  ++D    I+ 
Sbjct: 144 PNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEP 203

Query: 196 NEGQNGQSLPSSSSSS 207
           +        P  S SS
Sbjct: 204 SSSSGLTDEPHGSGSS 211

[Close]

BLAST of MS023562 vs. TAIR 10
Match: AT2G42360.1 (RING/U-box superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-19
Identity = 73/220 (33.18%), Postives = 109/220 (49.55%), Query Frame = 0


Query: 14  SIFSYNTNIMLAALISLLLVVLFVLLLHAYAKCFFPPRPRRRRTRRSSVAVSYLLHPSRL 73
           S +  N+ IMLAA+ SL  V+L V  LH YA+       RRRR     + V +  HP  +
Sbjct: 23  STYDLNSKIMLAAVASLSGVILIVFALHLYARFVL----RRRREAFRGLPVIF-RHPFEM 82

Query: 74  SLFDLAGAPPSKGLDPAAISKIPLFVYGSETPHAAAPMEECAICLSEFEDRELGRRLPKC 133
                    P +GL+P  I+ +P F  G+ T   AA   ECA+CLS  ++++  R LP C
Sbjct: 83  ---------PKRGLNPTVIASLPTFTVGA-TDGVAASATECAVCLSVLKEQDKARELPNC 142

Query: 134 SHGFHLECIDMWLDSHANCPVCRAPVVCDAANCPDAAESGRAGGIGPETDRNCEIQSNEG 193
            H FH++C+D WL + + CPVCR  V       P      R G +G  T     +++   
Sbjct: 143 KHIFHVDCVDTWLTTCSTCPVCRTEV----EPRPRLEPEPREGPVG--TAPQLLVETRLN 202

Query: 194 QNGQSLPSSSSSSSSFDPPLMSLGASLKRMLSKNVSEGRI 234
              ++  SSSS + +   P   L  S +++L++  S  RI
Sbjct: 203 LTVEAASSSSSDNKTVVSPASRLN-SFRKILTRERSSNRI 220

The following BLAST results are available for this feature:

BLAST of MS023562 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895413.1	1.0e-80	70.70	RING-H2 finger protein ATL63 [Benincasa hispida]	[more]
XP_023519269.1	1.3e-80	69.03	RING-H2 finger protein ATL63-like [Cucurbita pepo subsp. pepo]	[more]
XP_022964854.1	1.3e-80	68.50	RING-H2 finger protein ATL63-like [Cucurbita moschata]	[more]
XP_022970592.1	1.7e-80	70.08	RING-H2 finger protein ATL63-like [Cucurbita maxima]	[more]
KAG6583350.1	2.5e-79	67.15	RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MS023562 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUZ9	1.1e-34	48.30	RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1	[more]
O22255	2.0e-26	43.06	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
Q9LZJ6	1.1e-24	38.86	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
Q8L9T5	2.2e-22	37.24	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
Q9SLC3	1.5e-18	33.18	E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 ...	[more]

BLAST of MS023562 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HPE0	6.4e-81	68.50	RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111464835 ...	[more]
A0A6J1HZJ3	8.4e-81	70.08	RING-H2 finger protein ATL63-like OS=Cucurbita maxima OX=3661 GN=LOC111469533 PE...	[more]
A0A6J1GBH1	4.8e-76	67.84	RING-H2 finger protein ATL63-like OS=Cucurbita moschata OX=3662 GN=LOC111452651 ...	[more]
A0A1S3C6K6	1.4e-75	69.88	RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497058 ...	[more]
A0A5A7UXS2	1.4e-75	69.88	RING-H2 finger protein ATL63 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of MS023562 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58580.1	8.1e-36	48.30	TOXICOS EN LEVADURA 63	[more]
AT2G47560.1	1.4e-27	43.06	RING/U-box superfamily protein	[more]
AT3G62690.1	7.6e-26	38.86	AtL5	[more]
AT3G16720.1	1.6e-23	37.24	TOXICOS EN LEVADURA 2	[more]
AT2G42360.1	1.1e-19	33.18	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 114..155 e-value: 4.2E-7 score: 39.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 113..156 e-value: 3.7E-12 score: 46.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 114..156 score: 12.592549
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 88..164 e-value: 1.3E-20 score: 74.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..214
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 5..239
None	No IPR available	PANTHER	PTHR14155:SF514	CHROMATIN REGULATOR PHD FAMILY-RELATED	coord: 5..239
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 113..156 e-value: 1.48146E-18 score: 74.6539
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 113..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023562.1	MS023562.1	mRNA