MS023556 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GACTCCGTCCTATCCTCTGCTCTCGGCCATCCATTTACTAACGAAGCTAAAGCACTCTGGATGCATTTCATTCAGGCCATGCTTTGGTCCATGTGGCTGGAAAGAAACCGTAGGATCTTCCAAGGAAAAGAGGCATCTACTACCAGCCTTTTTGAATCCATAGTGTCATTGGTTGTATCATGGTGCAAATGTTCTCCTACTTTTCAACACTATAGTTTTGTCTCTCTTTTAACCAAT GACTCCGTCCTATCCTCTGCTCTCGGCCATCCATTTACTAACGAAGCTAAAGCACTCTGGATGCATTTCATTCAGGCCATGCTTTGGTCCATGTGGCTGGAAAGAAACCGTAGGATCTTCCAAGGAAAAGAGGCATCTACTACCAGCCTTTTTGAATCCATAGTGTCATTGGTTGTATCATGGTGCAAATGTTCTCCTACTTTTCAACACTATAGTTTTGTCTCTCTTTTAACCAAT GACTCCGTCCTATCCTCTGCTCTCGGCCATCCATTTACTAACGAAGCTAAAGCACTCTGGATGCATTTCATTCAGGCCATGCTTTGGTCCATGTGGCTGGAAAGAAACCGTAGGATCTTCCAAGGAAAAGAGGCATCTACTACCAGCCTTTTTGAATCCATAGTGTCATTGGTTGTATCATGGTGCAAATGTTCTCCTACTTTTCAACACTATAGTTTTGTCTCTCTTTTAACCAAT DSVLSSALGHPFTNEAKALWMHFIQAMLWSMWLERNRRIFQGKEASTTSLFESIVSLVVSWCKCSPTFQHYSFVSLLTN Homology
BLAST of MS023556 vs. NCBI nr
Match: OVA14077.1 (Reverse transcriptase zinc-binding domain [Macleaya cordata] >OVA20865.1 Reverse transcriptase zinc-binding domain [Macleaya cordata]) HSP 1 Score: 55.5 bits (132), Expect = 2.5e-04 Identity = 23/61 (37.70%), Postives = 37/61 (60.66%), Query Frame = 0
BLAST of MS023556 vs. NCBI nr
Match: BBN69746.1 (VIRB2-interacting protein 2 [Prunus dulcis]) HSP 1 Score: 54.7 bits (130), Expect = 4.2e-04 Identity = 28/79 (35.44%), Postives = 43/79 (54.43%), Query Frame = 0
BLAST of MS023556 vs. NCBI nr
Match: BBG98819.1 (VIRB2-interacting protein 2 [Prunus dulcis] >BBH09158.1 VIRB2-interacting protein 2 [Prunus dulcis]) HSP 1 Score: 54.7 bits (130), Expect = 4.2e-04 Identity = 28/79 (35.44%), Postives = 43/79 (54.43%), Query Frame = 0
BLAST of MS023556 vs. NCBI nr
Match: OVA10600.1 (hypothetical protein BVC80_3295g1 [Macleaya cordata]) HSP 1 Score: 53.9 bits (128), Expect = 7.2e-04 Identity = 23/65 (35.38%), Postives = 37/65 (56.92%), Query Frame = 0
BLAST of MS023556 vs. NCBI nr
Match: XP_010250619.1 (PREDICTED: uncharacterized protein LOC104592815 isoform X3 [Nelumbo nucifera]) HSP 1 Score: 53.5 bits (127), Expect = 9.5e-04 Identity = 26/67 (38.81%), Postives = 35/67 (52.24%), Query Frame = 0
BLAST of MS023556 vs. ExPASy TrEMBL
Match: A0A200QUD8 (Reverse transcriptase zinc-binding domain OS=Macleaya cordata OX=56857 GN=BVC80_1787g164 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.2e-04 Identity = 23/61 (37.70%), Postives = 37/61 (60.66%), Query Frame = 0
BLAST of MS023556 vs. ExPASy TrEMBL
Match: A0A4Y1R3V4 (VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_008314 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.1e-04 Identity = 28/79 (35.44%), Postives = 43/79 (54.43%), Query Frame = 0
BLAST of MS023556 vs. ExPASy TrEMBL
Match: A0A5H2Y6K0 (VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_1151S000200 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.1e-04 Identity = 28/79 (35.44%), Postives = 43/79 (54.43%), Query Frame = 0
BLAST of MS023556 vs. ExPASy TrEMBL
Match: A0A803QEA6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.7e-04 Identity = 27/77 (35.06%), Postives = 46/77 (59.74%), Query Frame = 0
BLAST of MS023556 vs. ExPASy TrEMBL
Match: A0A200QJC8 (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_3295g1 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.5e-04 Identity = 23/65 (35.38%), Postives = 37/65 (56.92%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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