MS023493 (gene) Bitter gourd (TR) v1

Overview


Name	MS023493
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	outer envelope pore protein 21, chloroplastic
Location	scaffold787: 446299 .. 449451 (+)
RNA-Seq Expression	MS023493
Synteny	MS023493

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGACTTCTCTCAGATATGCCGGCGACACCAGAGCCTTAAGAATCCACGCCAAGGAGAAGATTCCTCTCGACTCCAACATTTTCTTGCAGGTACTCCATTTCCACTTCATCCTTTCTTTTTTCCATGTTCTATTCACTGGCCATAGTATAATCACTCATTTTGCCAATTTCGCAAGTGTGTGTAATTTGAGCGATTTTATCTGATGGTTTATCTCTTGAGAGCAATGTTAGTGGTTTTGTCTGCCAATACCTGCTGTTGATTCTGGTGATGCAATTTTAGCATAGAGAGCTTCTAAATTCTTTAGCAACCGACCGAAGTACCTGTACTTCAATCAATTGACCAAGCACGGGAGCTATTGACTAAAAAGTTTAATGCGACATTGACTGGATAAAAGAAGGGTTATAGACAGATGAGCGTTTACGACCGTTTATGATACTGGATACTGAATCAGACAATTTCAGATGCTCAAATTGATTGGAAAACTATCTTGGAGGATTTTGTTGTGCTGATTGAGAACCATAACTAATTTTATAGGCCTCATTTCTAACAAAGATGCCTTTCGTCTTACTCCTCGAAGGTACATGGAGAGTTAGATACAAGAGTTGGAGAACCGAGTCTGCTTGCTGCTTCCTTAAGGCAATTTTACCCTGATGTAAGGCTTTCTCTGTGGAACCAATTCATATTTTGAACAAGTCAATGTTGTGTGTGATATTATTTTTTATCAAGGTTTTGTAAATCGAATGCAGTTGTCAGCAAGCGCAAGTATAGGAGTGCGGTATGACAAGTATGAGAAACTCCATTATCTTGGTCGTGGGAAAATGTCTTTTCCAGTGACAACTGATGGTCTGTTAAGGTTTACCATCAAAGGACAATCTTATCTTGACAAAGAATTCAAGGAGGTTAGTGCTGAGTAGTTATGTCTCAAAAGAGTGTAGAAACCCAAAAAAAAATAAAAGAAGATATTTTCTTCTGCTTTCTTCTGCAACCAATTTGTCCCATTGTTTCGTTGGCTTTGGCAGACTAAGTTCAAGGGAGCTGCTGAATTTTCTTTGGGCATACTTAATTTCCAGAAGGCACAAGACGTAAGAGTCAAATTGGGATATGAAGTGTCAGACAAGGTATATTTATTCTTTCCTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTACACAAAATAACTACATTTGTTTTCGATACTAAATCTTAGGTAAAATTACAATTTTAGTCTAATAGGTTCCTGAATTAAGTGTTAACTTTTCATTTTGAGTCTATTAGGTACCTATTCGACATTTTTTAAAATTCATAGACTTATTAGACACAAGATTGAACTTTATGTCTATCCACAACGTCTTAGTAGTCTGTCTTCCTTGATAGCAAGACTAGGAATGAAGTGTTGGCTTCTGTGGCTTGAGGAAAGAGGACCCTCTATCTCCTTCTTTTTCACCACTTGGTAGTTGATTTGTCTTAGATGGTCGTAGAGCTTGATAGTATAGTAGAGAAGATATTTAGCAAACTCATGAAATGGAAGCACTCTCAACTTAACATCAGAGCGTTTTTGGAGAGCTGGATAAAGAAAATGGTTGTCATCGGTTTATGATAAGAAGACAGTCTTACTCTTTGGTAGATGTGTATTTGACCTTAAAACTCAAGGACATTATACAACTTATAGAACAGATTTTGTTCAAGTAAAGTCATTCATTGTAGGTCTCTACCTAGAATACATTAGAAGAAGAAATGTGATCTTATTGTTCAAATATATTTTGTTGTTTCGTTTTCCTTAGCTAACCAAAAAATGGTGTTAATTCTTGTTGGATTTGGCCTCGTAGTGGAGAGCCCATAAAGCCATAAGCCCATTTCGGCTTTTTGCTTGTTAGGGAAGAAATAGGAAAATGGCTTCCAATACAAGTTTTTGGCTGGGCATATAAATATGTGACTTTTTCCGATAGAGAAAAAGTGAGAGGGAGAAGCAGTGTGAGGTTGAGGCTTAGAGAGAAGAAACAGAGAGGGAAGAGAGGCAAATAATGGATACTGTTTTGTGATTGGTTTGAAGAGGTTCAGTCCGTGTGTGTGGCTGCTGAAGAAGAAAAAAATGTTGTTTTCTTTGCCAGTTTATTGCCAAATCAATCATTTCTCTTTCAGTTTGGTTTCTTTGAGTCGTCTTCACCAGTGTGTGACCTCTCCTTTTGAGTTCCATCTTTGTAGATGAAGGGTATTTTGTGTACCAGTTATTAGTCAGGATTCTAGCTGCTTGTATTTCGGTGATTGACATCATATCCACTCCTCTAGTTGCGACTAGGGAATAAATGGTTGTAATTCATTATCTTTGCGTTGGAAGTTTTTCGGACCTTATAGTAAAGGGATTTCCATGTAAATGTTGGTGTCGTTACTTTTTTCTTATGTGCTTGTGCTTTATTTTTCACATTAAAATACTTTGACTACACATTAAAAATCCCAACAAGTTGTATCAGAGCGCTAGGTTGGCACGAAACTAAGGAGTTGATTTTGCTAGTTCGGTTGGTTGGTTTACTTCTTTTGGTTGGTATTCTTAAAGATGCTCCAATATTGAAAGTTTCACACAATTCTTGTTGATGTTTGCTTTTTAAAGAGTTTGAATTTGGGTGGTGGTTTCGTATGAATCCCAAAGCCATAAGTCTTTGGTTTAGGGCCATTAAGGAACTCATTTTGGAAGACTTTTTACGGCATTAAAAGGAGTAGATGTCACATTGTAAAACTAGTTTGTTTCTTAGCTTCTTTTTGGAGTTTTCTTTGAAAAAAAAAAAAAATTCTATCTTATGAAAGTTTCTGTTTCTAATAAACAGAAAGATACAAAAAATGGGCACAGACAAAAAGGAGGAAAAAAAATGAGAGAGAGAGAGAAGCTATCATTCCTAACATGACACAGCTTTACACGTTACATTATTAAGCAATCATTGTTCTGTATTGCATTTTTACTAAAAACACAACCTAATCTTAAATTATAATCCAAATTCATCTTACAGTCAAAAGTAAAAAATTATAACTCTCACTTTCTGCTTCTGCTTTCATACAGGTACCATACCTGCAGATCAGGGAGAACAATTGGACACTAAATGCAAACGTTAATGGTAGATGGAATGTGAGATTCGACCTG

mRNA sequence

ATGGAGACTTCTCTCAGATATGCCGGCGACACCAGAGCCTTAAGAATCCACGCCAAGGAGAAGATTCCTCTCGACTCCAACATTTTCTTGCAGGTACATGGAGAGTTAGATACAAGAGTTGGAGAACCGAGTCTGCTTGCTGCTTCCTTAAGGCAATTTTACCCTGATGTAAGGCTTTCTCTGTGGAACCAATATTTTGAACAAGTCAATGTTGTGTGTGATATTATTTTTTATCAAGGTTTTGTAAATCGAATGCAGTTGTCAGCAAGCGCAAGTATAGGAGTGCGGTATGACAAGTATGAGAAACTCCATTATCTTGGTCGTGGGAAAATGTCTTTTCCAGTGACAACTGATGGTCTGTTAAGGTTTACCATCAAAGGACAATCTTATCTTGACAAAGAATTCAAGGAGACTAAGTTCAAGGGAGCTGCTGAATTTTCTTTGGGCATACTTAATTTCCAGAAGGCACAAGACGTAAGAGTCAAATTGGGATATGAAGTGTCAGACAAGGTACCATACCTGCAGATCAGGGAGAACAATTGGACACTAAATGCAAACGTTAATGGTAGATGGAATGTGAGATTCGACCTG

Coding sequence (CDS)

ATGGAGACTTCTCTCAGATATGCCGGCGACACCAGAGCCTTAAGAATCCACGCCAAGGAGAAGATTCCTCTCGACTCCAACATTTTCTTGCAGGTACATGGAGAGTTAGATACAAGAGTTGGAGAACCGAGTCTGCTTGCTGCTTCCTTAAGGCAATTTTACCCTGATGTAAGGCTTTCTCTGTGGAACCAATATTTTGAACAAGTCAATGTTGTGTGTGATATTATTTTTTATCAAGGTTTTGTAAATCGAATGCAGTTGTCAGCAAGCGCAAGTATAGGAGTGCGGTATGACAAGTATGAGAAACTCCATTATCTTGGTCGTGGGAAAATGTCTTTTCCAGTGACAACTGATGGTCTGTTAAGGTTTACCATCAAAGGACAATCTTATCTTGACAAAGAATTCAAGGAGACTAAGTTCAAGGGAGCTGCTGAATTTTCTTTGGGCATACTTAATTTCCAGAAGGCACAAGACGTAAGAGTCAAATTGGGATATGAAGTGTCAGACAAGGTACCATACCTGCAGATCAGGGAGAACAATTGGACACTAAATGCAAACGTTAATGGTAGATGGAATGTGAGATTCGACCTG

Protein sequence

METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPDVRLSLWNQYFEQVNVVCDIIFYQGFVNRMQLSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGLLRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENNWTLNANVNGRWNVRFDL

Homology

[Close]

BLAST of MS023493 vs. NCBI nr
Match: XP_022153118.1 (outer envelope pore protein 21, chloroplastic [Momordica charantia])

HSP 1 Score: 327.0 bits (837), Expect = 1.1e-85
Identity = 167/197 (84.77%), Postives = 167/197 (84.77%), Query Frame = 0


Query: 1   METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPDVRLS 60
           METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPD    
Sbjct: 1   METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPD---- 60

Query: 61  LWNQYFEQVNVVCDIIFYQGFVNRMQLSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGL 120
                                     LSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGL
Sbjct: 61  --------------------------LSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGL 120

Query: 121 LRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENN 180
           LRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENN
Sbjct: 121 LRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENN 167

Query: 181 WTLNANVNGRWNVRFDL 198
           WTLNANVNGRWNVRFDL
Sbjct: 181 WTLNANVNGRWNVRFDL 167

[Close]

BLAST of MS023493 vs. NCBI nr
Match: XP_004144247.1 (outer envelope pore protein 21, chloroplastic [Cucumis sativus] >KGN47522.1 hypothetical protein Csa_019071 [Cucumis sativus])

HSP 1 Score: 282.7 bits (722), Expect = 2.4e-72
Identity = 136/197 (69.04%), Postives = 158/197 (80.20%), Query Frame = 0


Query: 1   METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPDVRLS 60
           M+TS RYA D+RALRIHAKEKI LDSN+FLQV GELDTR+GEPSLLAAS+RQFYPD    
Sbjct: 1   MDTSFRYAADSRALRIHAKEKISLDSNVFLQVRGELDTRIGEPSLLAASVRQFYPD---- 60

Query: 61  LWNQYFEQVNVVCDIIFYQGFVNRMQLSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGL 120
                                     LSASA +GV+YDKY+KLHY+GRGKMSFPVTTDGL
Sbjct: 61  --------------------------LSASAGLGVQYDKYKKLHYVGRGKMSFPVTTDGL 120

Query: 121 LRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENN 180
           LRFTIKGQS+LDK+FK+ K+KGAAEFSLG+LNFQ+ QDVRVK+GYEV +K+PY+QIRENN
Sbjct: 121 LRFTIKGQSHLDKDFKQFKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKIPYIQIRENN 167

Query: 181 WTLNANVNGRWNVRFDL 198
           WTLNA++NGRWNVR D+
Sbjct: 181 WTLNADINGRWNVRLDI 167

[Close]

BLAST of MS023493 vs. NCBI nr
Match: XP_008464824.1 (PREDICTED: outer envelope pore protein 21, chloroplastic [Cucumis melo])

HSP 1 Score: 282.0 bits (720), Expect = 4.1e-72
Identity = 138/197 (70.05%), Postives = 158/197 (80.20%), Query Frame = 0


Query: 1   METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPDVRLS 60
           M+TS RYAGD+RALRIHAKEKI LDSNIFLQV GELDTR+GEPSLLAAS+RQF  D    
Sbjct: 1   MDTSFRYAGDSRALRIHAKEKISLDSNIFLQVRGELDTRIGEPSLLAASVRQFNQD---- 60

Query: 61  LWNQYFEQVNVVCDIIFYQGFVNRMQLSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGL 120
                                     LSASA +GV+YDKY+KLHY+GRGKMSFPVTTDGL
Sbjct: 61  --------------------------LSASAGLGVQYDKYKKLHYVGRGKMSFPVTTDGL 120

Query: 121 LRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENN 180
           LRFTIKGQS+LDK+FK+ K+KGAAEFSLG+LNFQ+ QDVRVK+GYEV +K+PY+QIRENN
Sbjct: 121 LRFTIKGQSHLDKDFKQIKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKIPYVQIRENN 167

Query: 181 WTLNANVNGRWNVRFDL 198
           WTLNA++NGRWNVRFDL
Sbjct: 181 WTLNADINGRWNVRFDL 167

[Close]

BLAST of MS023493 vs. NCBI nr
Match: XP_038884931.1 (outer envelope pore protein 21, chloroplastic [Benincasa hispida])

HSP 1 Score: 277.3 bits (708), Expect = 1.0e-70
Identity = 134/196 (68.37%), Postives = 156/196 (79.59%), Query Frame = 0


Query: 1   METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPDVRLS 60
           M+TS RY GD+RALRIHAKEKI LDSNIFL+VHGELDTR+GEPSLLAAS+RQFYPD    
Sbjct: 1   MDTSFRYGGDSRALRIHAKEKISLDSNIFLEVHGELDTRIGEPSLLAASVRQFYPD---- 60

Query: 61  LWNQYFEQVNVVCDIIFYQGFVNRMQLSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGL 120
                                     LSASA++GV+YDKY+KLHYL RGKMSFPVTT+  
Sbjct: 61  --------------------------LSASAALGVQYDKYKKLHYLARGKMSFPVTTNDS 120

Query: 121 LRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENN 180
           L+FTIKG+SYLDK+FK+TK+KGAAEF L +LNFQK QDVRVK+GYEV +K+PY+QIRENN
Sbjct: 121 LKFTIKGRSYLDKDFKQTKYKGAAEFCLDVLNFQKEQDVRVKVGYEVFEKIPYVQIRENN 166

Query: 181 WTLNANVNGRWNVRFD 197
           WTLNA++NGRWNVRFD
Sbjct: 181 WTLNADINGRWNVRFD 166

[Close]

BLAST of MS023493 vs. NCBI nr
Match: XP_023536868.1 (outer envelope pore protein 21, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.2 bits (679), Expect = 2.3e-67
Identity = 133/197 (67.51%), Postives = 151/197 (76.65%), Query Frame = 0


Query: 1   METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPDVRLS 60
           METSLR  GD+RALRIHAKEKIPLDSNIFLQVHGELDTR+GEPSLLAAS+RQF+PD    
Sbjct: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFLQVHGELDTRMGEPSLLAASVRQFFPD---- 60

Query: 61  LWNQYFEQVNVVCDIIFYQGFVNRMQLSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGL 120
                                     L ASA IGV+YDKY KL +  RGKMSFPVTTDG+
Sbjct: 61  --------------------------LFASAGIGVQYDKYRKLQHFARGKMSFPVTTDGM 120

Query: 121 LRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENN 180
           L+FTIKGQS+ DK+FK+T FKGAAEFSLG+ N Q  QDVRVKLG+EV +K+PYLQIRENN
Sbjct: 121 LQFTIKGQSHHDKDFKQTNFKGAAEFSLGVYNVQGEQDVRVKLGFEVFEKIPYLQIRENN 167

Query: 181 WTLNANVNGRWNVRFDL 198
           WTLNA++NGRW+VRF L
Sbjct: 181 WTLNADINGRWSVRFIL 167

[Close]

BLAST of MS023493 vs. ExPASy Swiss-Prot
Match: Q9SM57 (Outer envelope pore protein 21, chloroplastic OS=Pisum sativum OX=3888 GN=OEP21 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.4e-51
Identity = 102/197 (51.78%), Postives = 130/197 (65.99%), Query Frame = 0


Query: 1   METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPDVRLS 60
           METSLRY GD++AL+IHAKEK+ +D+N F QV G LDT+ G+PS  +A +R FYP+   +
Sbjct: 1   METSLRYGGDSKALKIHAKEKLRIDTNTFFQVRGGLDTKTGQPSSGSALIRHFYPNFSAT 60

Query: 61  LWNQYFEQVNVVCDIIFYQGFVNRMQLSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGL 120
           L       V V  D                 S+GVRY K +KL Y    K +FPVT DGL
Sbjct: 61  L------GVGVRYD--------------KQDSVGVRYAKNDKLRYTVLAKKTFPVTNDGL 120

Query: 121 LRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENN 180
           + F IKG   +D++FKE K +G AEFS  + NFQK QDVR+++GYE  ++VPYLQIRENN
Sbjct: 121 VNFKIKGGCDVDQDFKEWKSRGGAEFSWNVFNFQKDQDVRLRIGYEAFEQVPYLQIRENN 177

Query: 181 WTLNANVNGRWNVRFDL 198
           WT NA+  GRWNVR+DL
Sbjct: 181 WTFNADYKGRWNVRYDL 177

[Close]

BLAST of MS023493 vs. ExPASy Swiss-Prot
Match: Q9FPG2 (Outer envelope pore protein 21B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP21B PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-46
Identity = 88/197 (44.67%), Postives = 124/197 (62.94%), Query Frame = 0


Query: 1   METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPDVRLS 60
           METS+RY  ++++++IHAKEK+P++S   LQ+HGELDT  G PS   A +R F+P+    
Sbjct: 1   METSMRYTSNSKSMKIHAKEKVPVNSKTHLQLHGELDTGTGAPSYFCAMIRHFFPEA--- 60

Query: 61  LWNQYFEQVNVVCDIIFYQGFVNRMQLSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGL 120
                                      S    +G+ YDK +KL  L RGK  FPV  D  
Sbjct: 61  ---------------------------STGLGVGLHYDKRQKLRCLVRGKKEFPVRADKR 120

Query: 121 LRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENN 180
           + F IKG+  +D++  +   KGAAEF+  I++F++ QDVR+K+GYE+ DKVPY+QIRENN
Sbjct: 121 VTFNIKGRCDIDQDLNQKNPKGAAEFAWNIMDFKEDQDVRIKVGYEMFDKVPYMQIRENN 167

Query: 181 WTLNANVNGRWNVRFDL 198
           WTLNAN+ G+WN+R+DL
Sbjct: 181 WTLNANMKGKWNLRYDL 167

[Close]

BLAST of MS023493 vs. ExPASy Swiss-Prot
Match: Q6ID99 (Outer envelope pore protein 21A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP21A PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.0e-45
Identity = 91/197 (46.19%), Postives = 120/197 (60.91%), Query Frame = 0


Query: 1   METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPDVRLS 60
           METSLRYA ++R+L+IHAKEK P++S   LQ+HGELDT  G PS   A +R F+ +    
Sbjct: 1   METSLRYATNSRSLKIHAKEKFPVNSKTRLQLHGELDTGAGVPSYFCAMIRYFFHEA--- 60

Query: 61  LWNQYFEQVNVVCDIIFYQGFVNRMQLSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGL 120
                                      S +  +G+ YDK EKL  L RGK  FPV TD +
Sbjct: 61  ---------------------------STNLGVGLHYDKREKLRCLVRGKKKFPVITDEV 120

Query: 121 LRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENN 180
           + F IKG+   D++  +   KGAAEF   I  FQK QD+R+++GYE+ +KVPY+QIRENN
Sbjct: 121 VTFNIKGRCDFDQDLVQRNAKGAAEFDWNIWKFQKDQDLRLRIGYEMFEKVPYMQIRENN 167

Query: 181 WTLNANVNGRWNVRFDL 198
           WT N N+ G+WNVR+DL
Sbjct: 181 WTFNTNLKGKWNVRYDL 167

[Close]

BLAST of MS023493 vs. ExPASy Swiss-Prot
Match: B8AFI8 (Outer envelope pore protein 21, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OEP21 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.1e-31
Identity = 76/205 (37.07%), Postives = 106/205 (51.71%), Query Frame = 0


Query: 1   METSLRYAG--------DTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQ 60
           METSLR  G            LRIHAKEK+P+ SN  LQ HGE+    G P+ LA   R 
Sbjct: 1   METSLRLRGGGSRPQSKSQEGLRIHAKEKLPIASNALLQAHGEIHAATGAPTYLALLFRN 60

Query: 61  FYPDVRLSLWNQYFEQVNVVCDIIFYQGFVNRMQLSASASIGVRYDKYEKLHYLGRGKMS 120
           FYP +  +L                  G    +    +  + + +D +   + L   K  
Sbjct: 61  FYPRLSANL------------------GLGLAIHFRNNQPLPLAWDNFS--YTLRASKAI 120

Query: 121 FPVTTDGLLRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVP 180
            P  ++ LL   +KG+   DK F  T    A E +  IL+ ++ QDVR+KLGY++  K+P
Sbjct: 121 IPFPSNALLGINLKGRLLADKYFNPTTRTAAVELAWTILDLKRGQDVRLKLGYQLLHKMP 180

Query: 181 YLQIRENNWTLNANVNGRWNVRFDL 198
           Y Q+RENNWT NA ++G+W+VRFDL
Sbjct: 181 YFQLRENNWTFNAYMDGKWDVRFDL 185

[Close]

BLAST of MS023493 vs. ExPASy Swiss-Prot
Match: Q6K965 (Outer envelope pore protein 21, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=OEP21 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.1e-31
Identity = 76/205 (37.07%), Postives = 106/205 (51.71%), Query Frame = 0


Query: 1   METSLRYAG--------DTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQ 60
           METSLR  G            LRIHAKEK+P+ SN  LQ HGE+    G P+ LA   R 
Sbjct: 1   METSLRLRGGGSRPQSKSQEGLRIHAKEKLPIASNALLQAHGEIHAATGAPTYLALLFRN 60

Query: 61  FYPDVRLSLWNQYFEQVNVVCDIIFYQGFVNRMQLSASASIGVRYDKYEKLHYLGRGKMS 120
           FYP +  +L                  G    +    +  + + +D +   + L   K  
Sbjct: 61  FYPRLSANL------------------GLGLAIHFRNNQPLPLAWDNFS--YTLRASKAI 120

Query: 121 FPVTTDGLLRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVP 180
            P  ++ LL   +KG+   DK F  T    A E +  IL+ ++ QDVR+KLGY++  K+P
Sbjct: 121 IPFPSNALLGINLKGRLLADKYFNPTARTAAVELAWTILDLKRGQDVRLKLGYQLLHKMP 180

Query: 181 YLQIRENNWTLNANVNGRWNVRFDL 198
           Y Q+RENNWT NA ++G+W+VRFDL
Sbjct: 181 YFQLRENNWTFNAYMDGKWDVRFDL 185

[Close]

BLAST of MS023493 vs. ExPASy TrEMBL
Match: A0A6J1DGN6 (outer envelope pore protein 21, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111020697 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 5.3e-86
Identity = 167/197 (84.77%), Postives = 167/197 (84.77%), Query Frame = 0


Query: 1   METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPDVRLS 60
           METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPD    
Sbjct: 1   METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPD---- 60

Query: 61  LWNQYFEQVNVVCDIIFYQGFVNRMQLSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGL 120
                                     LSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGL
Sbjct: 61  --------------------------LSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGL 120

Query: 121 LRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENN 180
           LRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENN
Sbjct: 121 LRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENN 167

Query: 181 WTLNANVNGRWNVRFDL 198
           WTLNANVNGRWNVRFDL
Sbjct: 181 WTLNANVNGRWNVRFDL 167

[Close]

BLAST of MS023493 vs. ExPASy TrEMBL
Match: A0A0A0KGQ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355410 PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.2e-72
Identity = 136/197 (69.04%), Postives = 158/197 (80.20%), Query Frame = 0


Query: 1   METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPDVRLS 60
           M+TS RYA D+RALRIHAKEKI LDSN+FLQV GELDTR+GEPSLLAAS+RQFYPD    
Sbjct: 1   MDTSFRYAADSRALRIHAKEKISLDSNVFLQVRGELDTRIGEPSLLAASVRQFYPD---- 60

Query: 61  LWNQYFEQVNVVCDIIFYQGFVNRMQLSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGL 120
                                     LSASA +GV+YDKY+KLHY+GRGKMSFPVTTDGL
Sbjct: 61  --------------------------LSASAGLGVQYDKYKKLHYVGRGKMSFPVTTDGL 120

Query: 121 LRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENN 180
           LRFTIKGQS+LDK+FK+ K+KGAAEFSLG+LNFQ+ QDVRVK+GYEV +K+PY+QIRENN
Sbjct: 121 LRFTIKGQSHLDKDFKQFKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKIPYIQIRENN 167

Query: 181 WTLNANVNGRWNVRFDL 198
           WTLNA++NGRWNVR D+
Sbjct: 181 WTLNADINGRWNVRLDI 167

[Close]

BLAST of MS023493 vs. ExPASy TrEMBL
Match: A0A1S3CMW4 (outer envelope pore protein 21, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502611 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.0e-72
Identity = 138/197 (70.05%), Postives = 158/197 (80.20%), Query Frame = 0


Query: 1   METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPDVRLS 60
           M+TS RYAGD+RALRIHAKEKI LDSNIFLQV GELDTR+GEPSLLAAS+RQF  D    
Sbjct: 1   MDTSFRYAGDSRALRIHAKEKISLDSNIFLQVRGELDTRIGEPSLLAASVRQFNQD---- 60

Query: 61  LWNQYFEQVNVVCDIIFYQGFVNRMQLSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGL 120
                                     LSASA +GV+YDKY+KLHY+GRGKMSFPVTTDGL
Sbjct: 61  --------------------------LSASAGLGVQYDKYKKLHYVGRGKMSFPVTTDGL 120

Query: 121 LRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENN 180
           LRFTIKGQS+LDK+FK+ K+KGAAEFSLG+LNFQ+ QDVRVK+GYEV +K+PY+QIRENN
Sbjct: 121 LRFTIKGQSHLDKDFKQIKYKGAAEFSLGVLNFQREQDVRVKVGYEVFEKIPYVQIRENN 167

Query: 181 WTLNANVNGRWNVRFDL 198
           WTLNA++NGRWNVRFDL
Sbjct: 181 WTLNADINGRWNVRFDL 167

[Close]

BLAST of MS023493 vs. ExPASy TrEMBL
Match: A0A6J1KSM1 (outer envelope pore protein 21, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496077 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.5e-67
Identity = 132/197 (67.01%), Postives = 151/197 (76.65%), Query Frame = 0


Query: 1   METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPDVRLS 60
           METSLR  GD+RALRIHAKEKIPLDSNIFLQVHGELDTR+GEPSLLAAS+RQF+PD    
Sbjct: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFLQVHGELDTRMGEPSLLAASVRQFFPD---- 60

Query: 61  LWNQYFEQVNVVCDIIFYQGFVNRMQLSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGL 120
                                     L ASA IGV+YDKY KL +  RGKMSFPVTTDG+
Sbjct: 61  --------------------------LFASAGIGVQYDKYRKLQHFARGKMSFPVTTDGM 120

Query: 121 LRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENN 180
           L+FTIKGQS+ DK+FK+T FKGAAEFSLG+ N Q  QDVRVK+G+EV +K+PYLQIRENN
Sbjct: 121 LQFTIKGQSHHDKDFKQTNFKGAAEFSLGVYNVQGEQDVRVKVGFEVFEKIPYLQIRENN 167

Query: 181 WTLNANVNGRWNVRFDL 198
           WTLNA++NGRW+VRF L
Sbjct: 181 WTLNADINGRWSVRFIL 167

[Close]

BLAST of MS023493 vs. ExPASy TrEMBL
Match: A0A6J1GHG8 (outer envelope pore protein 21, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454002 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 4.3e-67
Identity = 132/197 (67.01%), Postives = 151/197 (76.65%), Query Frame = 0


Query: 1   METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPDVRLS 60
           METSLR  GD+RALRIHAKEKIPLDSNIFLQVHGELDTR+GEPSLLAAS+RQF+PD    
Sbjct: 1   METSLRCGGDSRALRIHAKEKIPLDSNIFLQVHGELDTRMGEPSLLAASVRQFFPD---- 60

Query: 61  LWNQYFEQVNVVCDIIFYQGFVNRMQLSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGL 120
                                     L ASA IGV+YDKY KL +  RGKMSFPVTTDG+
Sbjct: 61  --------------------------LFASAGIGVQYDKYRKLQHFARGKMSFPVTTDGM 120

Query: 121 LRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENN 180
           L+FTIKGQS+ DK+FK+T FKGAAEFSLG+ N Q  QDVRVKLG+EV +K+PYLQIRENN
Sbjct: 121 LQFTIKGQSHHDKDFKQTNFKGAAEFSLGVYNVQGDQDVRVKLGFEVFEKIPYLQIRENN 167

Query: 181 WTLNANVNGRWNVRFDL 198
           W+LNA++NGRW+VRF L
Sbjct: 181 WSLNADINGRWSVRFIL 167

[Close]

BLAST of MS023493 vs. TAIR 10
Match: AT1G76405.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20816.1); Has 52 Blast hits to 52 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 188.0 bits (476), Expect = 7.5e-48
Identity = 88/197 (44.67%), Postives = 124/197 (62.94%), Query Frame = 0


Query: 1   METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPDVRLS 60
           METS+RY  ++++++IHAKEK+P++S   LQ+HGELDT  G PS   A +R F+P+    
Sbjct: 1   METSMRYTSNSKSMKIHAKEKVPVNSKTHLQLHGELDTGTGAPSYFCAMIRHFFPEA--- 60

Query: 61  LWNQYFEQVNVVCDIIFYQGFVNRMQLSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGL 120
                                      S    +G+ YDK +KL  L RGK  FPV  D  
Sbjct: 61  ---------------------------STGLGVGLHYDKRQKLRCLVRGKKEFPVRADKR 120

Query: 121 LRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENN 180
           + F IKG+  +D++  +   KGAAEF+  I++F++ QDVR+K+GYE+ DKVPY+QIRENN
Sbjct: 121 VTFNIKGRCDIDQDLNQKNPKGAAEFAWNIMDFKEDQDVRIKVGYEMFDKVPYMQIRENN 167

Query: 181 WTLNANVNGRWNVRFDL 198
           WTLNAN+ G+WN+R+DL
Sbjct: 181 WTLNANMKGKWNLRYDL 167

[Close]

BLAST of MS023493 vs. TAIR 10
Match: AT1G20816.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76405.2); Has 52 Blast hits to 52 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 183.7 bits (465), Expect = 1.4e-46
Identity = 91/197 (46.19%), Postives = 120/197 (60.91%), Query Frame = 0


Query: 1   METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPDVRLS 60
           METSLRYA ++R+L+IHAKEK P++S   LQ+HGELDT  G PS   A +R F+ +    
Sbjct: 1   METSLRYATNSRSLKIHAKEKFPVNSKTRLQLHGELDTGAGVPSYFCAMIRYFFHEA--- 60

Query: 61  LWNQYFEQVNVVCDIIFYQGFVNRMQLSASASIGVRYDKYEKLHYLGRGKMSFPVTTDGL 120
                                      S +  +G+ YDK EKL  L RGK  FPV TD +
Sbjct: 61  ---------------------------STNLGVGLHYDKREKLRCLVRGKKKFPVITDEV 120

Query: 121 LRFTIKGQSYLDKEFKETKFKGAAEFSLGILNFQKAQDVRVKLGYEVSDKVPYLQIRENN 180
           + F IKG+   D++  +   KGAAEF   I  FQK QD+R+++GYE+ +KVPY+QIRENN
Sbjct: 121 VTFNIKGRCDFDQDLVQRNAKGAAEFDWNIWKFQKDQDLRLRIGYEMFEKVPYMQIRENN 167

Query: 181 WTLNANVNGRWNVRFDL 198
           WT N N+ G+WNVR+DL
Sbjct: 181 WTFNTNLKGKWNVRYDL 167

[Close]

BLAST of MS023493 vs. TAIR 10
Match: AT1G76405.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20816.1); Has 38 Blast hits to 38 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-13
Identity = 29/56 (51.79%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 1  METSLRYAGDTRALRIHAKEKIPLDSNIFLQVHGELDTRVGEPSLLAASLRQFYPD 57
          METS+RY  ++++++IHAKEK+P++S   LQ+HGELDT  G PS   A +R F+P+
Sbjct: 1  METSMRYTSNSKSMKIHAKEKVPVNSKTHLQLHGELDTGTGAPSYFCAMIRHFFPE 56

The following BLAST results are available for this feature:

BLAST of MS023493 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153118.1	1.1e-85	84.77	outer envelope pore protein 21, chloroplastic [Momordica charantia]	[more]
XP_004144247.1	2.4e-72	69.04	outer envelope pore protein 21, chloroplastic [Cucumis sativus] >KGN47522.1 hypo...	[more]
XP_008464824.1	4.1e-72	70.05	PREDICTED: outer envelope pore protein 21, chloroplastic [Cucumis melo]	[more]
XP_038884931.1	1.0e-70	68.37	outer envelope pore protein 21, chloroplastic [Benincasa hispida]	[more]
XP_023536868.1	2.3e-67	67.51	outer envelope pore protein 21, chloroplastic-like isoform X1 [Cucurbita pepo su...	[more]

BLAST of MS023493 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SM57	5.4e-51	51.78	Outer envelope pore protein 21, chloroplastic OS=Pisum sativum OX=3888 GN=OEP21 ...	[more]
Q9FPG2	1.1e-46	44.67	Outer envelope pore protein 21B, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
Q6ID99	2.0e-45	46.19	Outer envelope pore protein 21A, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
B8AFI8	2.1e-31	37.07	Outer envelope pore protein 21, chloroplastic OS=Oryza sativa subsp. indica OX=3...	[more]
Q6K965	2.1e-31	37.07	Outer envelope pore protein 21, chloroplastic OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of MS023493 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DGN6	5.3e-86	84.77	outer envelope pore protein 21, chloroplastic OS=Momordica charantia OX=3673 GN=...	[more]
A0A0A0KGQ0	1.2e-72	69.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355410 PE=3 SV=1	[more]
A0A1S3CMW4	2.0e-72	70.05	outer envelope pore protein 21, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A6J1KSM1	2.5e-67	67.01	outer envelope pore protein 21, chloroplastic-like isoform X1 OS=Cucurbita maxim...	[more]
A0A6J1GHG8	4.3e-67	67.01	outer envelope pore protein 21, chloroplastic-like isoform X1 OS=Cucurbita mosch...	[more]

BLAST of MS023493 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76405.2	7.5e-48	44.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G20816.1	1.4e-46	46.19	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G76405.1	1.6e-13	51.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35993:SF1	OUTER ENVELOPE PORE PROTEIN 21B, CHLOROPLASTIC	coord: 1..197
IPR034575	Outer envelope pore protein 21	PANTHER	PTHR35993	OUTER ENVELOPE PORE PROTEIN 21B, CHLOROPLASTIC	coord: 1..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023493.1	MS023493.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044070	regulation of anion transport
molecular_function	GO:0008308	voltage-gated anion channel activity