MS023470 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCGTTGACCCTAAAACCCTCCTTTCCCACCTCTAACTTATCTTCTCCTTCTTCTTCTTCCATTTCTCTCAATTTTCCTCGCTTCTCTGTAATTAGCTTCCCGAGGAAGCCCAGAAATGGCCTCGCCGTGAGACTCCGCGCCTACGACTCTTCTAAGAGCGATATGCCCGATTTCTCCTCCGGCGAACCCAACCCTCCCAACGGTACTTTGGTATTCCCGTCTCTCTCTCTATCCTCTCCTCAGCTTTTGTGCTTTTCTTGTAGCGTACGGTTTATATTGTCAATGGGTATGTTGTAGAAATGTCAACGGGAACTTGGGGAAGTTTGAAGCTTTCCAGCAGTCGTGGATTCCGTTCTACTGTATTCTCTATTATATCTAGCAGAATAATCTGAGTGAATATTTTTCAAAATGGGTCTGGTTTGATAATTGGGAGAATGCATTTTTGTTAGATATCACTGTCAAACATTGAAATTATGGATGCTGTAGCTATCGTATATCTTTAACGGGTGGTATATTCACTTCCTTTTAGAGCTTTTACCTTGCTACTAGCCATTACGTGGTGCTGTCTGTAAAGTGTTGATAGTGATTTTTAGTTTTATTCTTTGTTAATTTGGTTGGTTTTCTAAGTCATCATGATGAACCTGATGGCTGTTTTGTATTGATTCGGTTTTCGTTATGTTTGTTCTAGATTTGACCTTCTGTAATTCTTTGAACATCTTTTGTGGAATTGGCAGCCAAAAACCCGAAGGGACATTCTACTGGAATATGTTAAGAATGTCCAACCAGAATTCATGGAATTGTTTGTTCAGAGAGCACCAAAACAGGTGGATCTCTATTTGGTTTAATATCAATTTCTTTGATATAGGACTCAACTTACTGTTATGGTCAATTCCATGAGTCTCCAATAATTTTATTCTTCTCCGATTCCTTTTTTAGGTTGTTGATGCAATGCGTCAAACAGTCACAAATATGATTGGAACTCTACCTCCACAGTTTTTTGCAGTTACTGTCACCACAGTACGTATATATGCTTTTGTTATTCTTACATTCAGAGTCACCCAAATATTTGTTGTACAATTGGTATTCAGTAAGATCGTGTGTTTAAATTTAATATTTGGTTCAGGTTGCTGAAAATCTTGCACAGCTCATGTACAGTGTAATGATGACTGGATATATGTTTAAAAATGCCCAAAATCGCTTAGAACTGCAGCAAAGTTTAGAGCAGATTGCTCTCCCAGAGGCAAAGGATGAAAAGGTATTTTAGATGTTTCTATGTGGACCTTGACAAATTTAACATTGAAAATTCCACACATTTTAATTTTTGAAATAATATTTCCTATTTGCTCCTCCATAAGCAAATAAATACTGACAGTCCTCCGGCTGTGCATCTGTTACTTTACACTGGGTTAAAAGCCAGATCTGGATTGACGTCTGTCATGATAACTTCCGTTTTCTTTCTTCAGTTGTTTTATTGCAAGTGTGATTCTAGTTTGTTTTGGCTTACTCATCCTGGAAGTCAGGGTTGCTAAAATGATATGACCATGATGTTTCTATCCTTTTCATAAATCAAATTAAGCTTGCTAGAATTTACCGGGATATCCCAACTTCTTGCTAACTTTAACATCATGCAAGGATTTCCATGATACTGTTGCATGTTCCTATCCAAAAAAAAAAAAAAAAAAAAAGTTCTCTGGGTCTTATATCACGTATGTCACTTCACTACTGCATTACAAATGCATCCATTTTGTTTTGTTCTAGGCAAAGTCATTGTAGGCAAAGTCATTGTTACTTTGACCACGATAGATTACTATAGTGCATCTAAATTAGAGATGTGGTAGAATTGTTGATTTATGGAGTTCTTTTTCTTTTTATTATTTATTTATTTTTTTTCACAATAGGGACTAGAGAATGATGTGGAATATCTATCAGAAGCTTTGCTCTGTAGTCTGTTGGTCCCTTACTCTGCTCTTAAGTTTCACTCTTAAAGGTCTATAAGTGAATGTCTTAGATACATTTATTTTGTTTAACGTCGTTACTGTAGAAAGATCTAATTTCCCCTTTGAGCATTCTACTTATCTGACTATAATTATTAGCATTATGACTTTTCACCATTTTAATAAATCATGGCTAAGGCTTAATGTGATTAGTGCTGTAGTTCAAGGATCCTTCTTGTCTACCTAGTTTGTCATTGTTCTGATACAATCAGGTCATGTACTGCCTATACAAACATTCTCATAAAATTTCATTAAAAATCTCTCTGTTGTCTACAAATTTATGTGTGCAATGGCATATCGTTGAGAAGGTGTCTGGTCTTTTACTTTAATTTTATCTAATATGAATTAATCCTGTGATTGTTCAGGATGATTCGAATTATGCAGCTGGTACGCAAAAGAATGTCACAGGTGAAGTTATCAGGTGGAATAATGTATCTGGTCCTGAGAGAATTGATGCTAAAAGGTACATAGAACTACTTGAAGCAGAGATAGAGGAACTGAATCAGCAAGTAGGAAGGAAATCTGCAAATGGGCCAAATGAATTGTTGGAATATCTCAAATCCCTTGAACCCCAAAATCTGAAGGTAAGAAAACTTTATTTTCTTTGCTAGCTAGTTGCTTTTGTTGGGCTTGTTGAATGGTTATTAGATTTTTGATTAGTTATCTGGTGTTGGAGTCCGCTGGACTTCAAGTTACAACGTCATGTGGTACAGTCGATTGTCTACAGCAAGAAAAAGTGATTTTTTTTTTATTTTTGTTTTATTTTTTAAATTTAAAACTTTTTTGAAACAAGAAGCAAGAAGCACCTTTCCTTTATATATCGAGAAGTCTTTGTTGTATCAAAGATGATGATACTGACACTTACTGTCTTGGCTCCATTAATTGTGGTTAAACTTTAAAGAAGCATCACTTAAAACCTGTAAACCAAGACATTGTTGATATGATTGTGGGACTGAATGCGCTTATACAATTCAGGTGTCACAGTTTGGCAAACTATTAGCTAACCTCCAATTTAGCCACCATATAAGAGACGGGGCTGATGCCATTCAAATGCTATTTCTTTTACCCACTCCTTGAGGACAAGTTGTCTTTTATGAGCAGCGTAATTGTAGGATTGTATAAGAGGTATCTTATTCATTAGCAAATAAGTTTATTAGAAAAAAGTAGTTATAAATGGAGTCAGGGTAGAGAAGTTAAGAAATTATTTAGCTTTTTGGATTTGAGCTTGCTCAAGAGGGAGTCGTCCAAGTTTCTTTATTTTCTTGTTTCTCAAATTTCAACATTATTTCTATTTCATTCTCTGGTTTCTAAAAGAAAAAAAAAAACCCATTTAAAATTCCATGCATACAAGCTCTGTTCTAAATTCTATGCAGCATTGTCATATTCATATTTGTATGACTATATACCCTTCAAGTTGGATGCTTCCTCAATTTTATTAAACCTGAATCCAAACAAGTACCATTGATTCAGGAATTAGTTTGTTTGTTATCTGTACTGATCTCATGCCATCAATAGCACCATCTAAACCTTTGATTACCACAAATGTAGGAGTTGACAAGTAGCGCTGGTGAAGATGCTGTAGTTGCAATGAATACATTCATAAAGCGCCTTTTAGCGGTTTCAGATCCAAGTCAAGTGAAGGTCTGTGTCTAGACAAACATACTCTATCCTTTTTGCTAACCGTAACTGCTAAGGGTTGACGATCGGTTTGGCCAGTTTGGTCAAGAACCAAACTAAGTTGAACCGGTTACATAGATAAAATAATATTGTTCATTACAAGAAATGCAACTAAGATTCTGCATTTATTTTGGATCTTTATGTTTCAGACAAGTGTAACAGAGACCACAGCACCAGAGCTGGCGAAGCTTCTGTACTGGCTAATGGTGGTTGGGTACGGCATTCGCAACATCGAAGTTCGGTTTGACATGGAAAGAATTCTGGGAAGTTCGCCGAAACTCGCAGAGCTGCCTCCTGGAGAAATTGTG ATGTCTTCGTTGACCCTAAAACCCTCCTTTCCCACCTCTAACTTATCTTCTCCTTCTTCTTCTTCCATTTCTCTCAATTTTCCTCGCTTCTCTGTAATTAGCTTCCCGAGGAAGCCCAGAAATGGCCTCGCCGTGAGACTCCGCGCCTACGACTCTTCTAAGAGCGATATGCCCGATTTCTCCTCCGGCGAACCCAACCCTCCCAACGGTACTTTGCCAAAAACCCGAAGGGACATTCTACTGGAATATGTTAAGAATGTCCAACCAGAATTCATGGAATTGTTTGTTCAGAGAGCACCAAAACAGGTTGTTGATGCAATGCGTCAAACAGTCACAAATATGATTGGAACTCTACCTCCACAGTTTTTTGCAGTTACTGTCACCACAGTTGCTGAAAATCTTGCACAGCTCATGTACAGTGTAATGATGACTGGATATATGTTTAAAAATGCCCAAAATCGCTTAGAACTGCAGCAAAGTTTAGAGCAGATTGCTCTCCCAGAGGCAAAGGATGAAAAGGATGATTCGAATTATGCAGCTGGTACGCAAAAGAATGTCACAGGTGAAGTTATCAGGTGGAATAATGTATCTGGTCCTGAGAGAATTGATGCTAAAAGGTACATAGAACTACTTGAAGCAGAGATAGAGGAACTGAATCAGCAAGTAGGAAGGAAATCTGCAAATGGGCCAAATGAATTGTTGGAATATCTCAAATCCCTTGAACCCCAAAATCTGAAGGAGTTGACAAGTAGCGCTGGTGAAGATGCTGTAGTTGCAATGAATACATTCATAAAGCGCCTTTTAGCGGTTTCAGATCCAAGTCAAGTGAAGACAAGTGTAACAGAGACCACAGCACCAGAGCTGGCGAAGCTTCTGTACTGGCTAATGGTGGTTGGGTACGGCATTCGCAACATCGAAGTTCGGTTTGACATGGAAAGAATTCTGGGAAGTTCGCCGAAACTCGCAGAGCTGCCTCCTGGAGAAATTGTG ATGTCTTCGTTGACCCTAAAACCCTCCTTTCCCACCTCTAACTTATCTTCTCCTTCTTCTTCTTCCATTTCTCTCAATTTTCCTCGCTTCTCTGTAATTAGCTTCCCGAGGAAGCCCAGAAATGGCCTCGCCGTGAGACTCCGCGCCTACGACTCTTCTAAGAGCGATATGCCCGATTTCTCCTCCGGCGAACCCAACCCTCCCAACGGTACTTTGCCAAAAACCCGAAGGGACATTCTACTGGAATATGTTAAGAATGTCCAACCAGAATTCATGGAATTGTTTGTTCAGAGAGCACCAAAACAGGTTGTTGATGCAATGCGTCAAACAGTCACAAATATGATTGGAACTCTACCTCCACAGTTTTTTGCAGTTACTGTCACCACAGTTGCTGAAAATCTTGCACAGCTCATGTACAGTGTAATGATGACTGGATATATGTTTAAAAATGCCCAAAATCGCTTAGAACTGCAGCAAAGTTTAGAGCAGATTGCTCTCCCAGAGGCAAAGGATGAAAAGGATGATTCGAATTATGCAGCTGGTACGCAAAAGAATGTCACAGGTGAAGTTATCAGGTGGAATAATGTATCTGGTCCTGAGAGAATTGATGCTAAAAGGTACATAGAACTACTTGAAGCAGAGATAGAGGAACTGAATCAGCAAGTAGGAAGGAAATCTGCAAATGGGCCAAATGAATTGTTGGAATATCTCAAATCCCTTGAACCCCAAAATCTGAAGGAGTTGACAAGTAGCGCTGGTGAAGATGCTGTAGTTGCAATGAATACATTCATAAAGCGCCTTTTAGCGGTTTCAGATCCAAGTCAAGTGAAGACAAGTGTAACAGAGACCACAGCACCAGAGCTGGCGAAGCTTCTGTACTGGCTAATGGTGGTTGGGTACGGCATTCGCAACATCGAAGTTCGGTTTGACATGGAAAGAATTCTGGGAAGTTCGCCGAAACTCGCAGAGCTGCCTCCTGGAGAAATTGTG MSSLTLKPSFPTSNLSSPSSSSISLNFPRFSVISFPRKPRNGLAVRLRAYDSSKSDMPDFSSGEPNPPNGTLPKTRRDILLEYVKNVQPEFMELFVQRAPKQVVDAMRQTVTNMIGTLPPQFFAVTVTTVAENLAQLMYSVMMTGYMFKNAQNRLELQQSLEQIALPEAKDEKDDSNYAAGTQKNVTGEVIRWNNVSGPERIDAKRYIELLEAEIEELNQQVGRKSANGPNELLEYLKSLEPQNLKELTSSAGEDAVVAMNTFIKRLLAVSDPSQVKTSVTETTAPELAKLLYWLMVVGYGIRNIEVRFDMERILGSSPKLAELPPGEIV Homology
BLAST of MS023470 vs. NCBI nr
Match: XP_022153182.1 (uncharacterized protein LOC111020737 [Momordica charantia]) HSP 1 Score: 625.5 bits (1612), Expect = 2.5e-175 Identity = 329/330 (99.70%), Postives = 329/330 (99.70%), Query Frame = 0
BLAST of MS023470 vs. NCBI nr
Match: XP_008464859.1 (PREDICTED: uncharacterized protein LOC103502630 isoform X1 [Cucumis melo]) HSP 1 Score: 560.1 bits (1442), Expect = 1.3e-155 Identity = 296/331 (89.43%), Postives = 308/331 (93.05%), Query Frame = 0
BLAST of MS023470 vs. NCBI nr
Match: XP_004144230.1 (uncharacterized protein LOC101214493 [Cucumis sativus] >KGN47546.1 hypothetical protein Csa_018942 [Cucumis sativus]) HSP 1 Score: 555.4 bits (1430), Expect = 3.2e-154 Identity = 293/331 (88.52%), Postives = 304/331 (91.84%), Query Frame = 0
BLAST of MS023470 vs. NCBI nr
Match: XP_023547210.1 (uncharacterized protein LOC111806088 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 554.7 bits (1428), Expect = 5.5e-154 Identity = 295/331 (89.12%), Postives = 310/331 (93.66%), Query Frame = 0
BLAST of MS023470 vs. NCBI nr
Match: XP_022999736.1 (uncharacterized protein LOC111493994 [Cucurbita maxima]) HSP 1 Score: 553.5 bits (1425), Expect = 1.2e-153 Identity = 296/331 (89.43%), Postives = 309/331 (93.35%), Query Frame = 0
BLAST of MS023470 vs. ExPASy TrEMBL
Match: A0A6J1DI85 (uncharacterized protein LOC111020737 OS=Momordica charantia OX=3673 GN=LOC111020737 PE=4 SV=1) HSP 1 Score: 625.5 bits (1612), Expect = 1.2e-175 Identity = 329/330 (99.70%), Postives = 329/330 (99.70%), Query Frame = 0
BLAST of MS023470 vs. ExPASy TrEMBL
Match: A0A1S3CMY9 (uncharacterized protein LOC103502630 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502630 PE=4 SV=1) HSP 1 Score: 560.1 bits (1442), Expect = 6.3e-156 Identity = 296/331 (89.43%), Postives = 308/331 (93.05%), Query Frame = 0
BLAST of MS023470 vs. ExPASy TrEMBL
Match: A0A0A0KIH2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358100 PE=4 SV=1) HSP 1 Score: 555.4 bits (1430), Expect = 1.5e-154 Identity = 293/331 (88.52%), Postives = 304/331 (91.84%), Query Frame = 0
BLAST of MS023470 vs. ExPASy TrEMBL
Match: A0A6J1KDY3 (uncharacterized protein LOC111493994 OS=Cucurbita maxima OX=3661 GN=LOC111493994 PE=4 SV=1) HSP 1 Score: 553.5 bits (1425), Expect = 5.9e-154 Identity = 296/331 (89.43%), Postives = 309/331 (93.35%), Query Frame = 0
BLAST of MS023470 vs. ExPASy TrEMBL
Match: A0A6J1KPA3 (uncharacterized protein LOC111496035 OS=Cucurbita maxima OX=3661 GN=LOC111496035 PE=4 SV=1) HSP 1 Score: 551.2 bits (1419), Expect = 2.9e-153 Identity = 290/328 (88.41%), Postives = 302/328 (92.07%), Query Frame = 0
BLAST of MS023470 vs. TAIR 10
Match: AT1G63610.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 537 Blast hits to 411 proteins in 100 species: Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink). ) HSP 1 Score: 443.4 bits (1139), Expect = 1.7e-124 Identity = 243/344 (70.64%), Postives = 284/344 (82.56%), Query Frame = 0
BLAST of MS023470 vs. TAIR 10
Match: AT1G63610.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 443.0 bits (1138), Expect = 2.2e-124 Identity = 243/345 (70.43%), Postives = 284/345 (82.32%), Query Frame = 0
BLAST of MS023470 vs. TAIR 10
Match: AT5G14970.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14910.1); Has 579 Blast hits to 397 proteins in 95 species: Archae - 0; Bacteria - 294; Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other Eukaryotes - 199 (source: NCBI BLink). ) HSP 1 Score: 92.4 bits (228), Expect = 7.1e-19 Identity = 71/278 (25.54%), Postives = 141/278 (50.72%), Query Frame = 0
BLAST of MS023470 vs. TAIR 10
Match: AT2G14910.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14970.1); Has 605 Blast hits to 425 proteins in 102 species: Archae - 0; Bacteria - 300; Metazoa - 25; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 191 (source: NCBI BLink). ) HSP 1 Score: 89.0 bits (219), Expect = 7.9e-18 Identity = 73/297 (24.58%), Postives = 143/297 (48.15%), Query Frame = 0
BLAST of MS023470 vs. TAIR 10
Match: AT2G14910.2 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14970.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 77.8 bits (190), Expect = 1.8e-14 Identity = 58/223 (26.01%), Postives = 116/223 (52.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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