MS023361 (gene) Bitter gourd (TR) v1

Overview


Name	MS023361
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein UXT homolog
Location	scaffold378: 359696 .. 362206 (-)
RNA-Seq Expression	MS023361
Synteny	MS023361

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGTAGGAACTGATAACTTTCGCCATGAGAAAGTTCAAAGATTTGAGGAATTTGTTGACCGTCGCTTGAAACCCGACCTGGTTCATGCAATTGCTGAAAGGTATGCATTGTCGCTTTTAGTTTCTCAACTTCTTGCATTTTGACGGATCAGAATGAAGCATGGTCAATCAAGTGATTTGTAATTTTGTTCAACCCATATAGATTGATATTCTAACTTAAAAGGATGATGTATGACTTGAGATTTCCTTTCATTGTCTTCCATGGAATTACATTAAATATATATGTTGTATGAGATTTAGTAGTTTTTTTTTTATTTTAGTAATTAATTCATAAATTAAGCTATGTGGTGGTGGCTGCCGGTGGGTGTCTAATGACTCTAATACATGCTTTGAGGGGAGACTTGTTCTGTAGTATCTTGAGAGCCCAAGGAAGATCTTTAACTAGCTTCGAAACAAATTTGTAGAATGTCATCGACTCATTTTGTTGTTTATATCGCCTCTGTCGTAAAAGAGTTGGAAAGGCTTCAAGAAGAGTATTTTCATTAATCTCTCTCAGTCTCTCTTAGTCCTGCCAAGGAGCGGCTTCAATTGTTGAACGACTATGTAAAGGAGCTTGAGGATGTTGTTAAGGATTTTGTTACTTCAAATACTTCTTCGTCTAAGTATGGATTGGAGCTTCATTTGGTTGGCAACAGTTTTTTGGTGTCCCAAGTTTCATATGAGCTGTTCTTAGGCCTTTTGTTGGTGGTTTTTGGCTTTTTTAATGTCAGATTATTATTCAATCTAATTGTATTGCTCCTCGTTAAGCTCGTCCTTTTCTTGTTTTCCTTTTCTCTTTTTCTATCTTTCCTTCAAGCTCCCTAAGTAATTTTTCGTTTCATTTTTCAATGAAAATTTATTTTTGGTTAAAAAAGGTATCTTAAGATGCCCATCTAAATGGTATGGTATCCGATTTGTTTTGTGAAACGATCATTAAGGGCTATTAACTTTTAATTTTCTTTAACATTTGTAACTAGTTAGGGACGTTTTTTGTTGCAGGGAAAGGCTATTGTTGTAGATACTAATCTATGTTTGATGTTTTTAATTTGTAGAGACTAGATGGCTGTGAATTTTTCTTGAAAACTTGAGATGTAAAATTCATTTAATTCCTCCCTTCCTGTTTTGTTTTTTGTTTGGCAGGGACAAAGTGTTTGAGCAGCAGAAGGTGTTGTATCCTTTATAATTTATCTAATACCTTGTCAAATTTATGGCTTCACTCCATTCTTAGTGATTGATCCTGCCATACAATACTCTGCTCGAGTTTTGCTGCATTTTCAACGATGTTTATGATATTGTTTACTTAACATTCTTTCACCCTTAGTTCAGATCTTCGAAAAAACATCGAAAATCTGGAGAAAAACAGTATAACTAACCTCAGAACGTTGGTCAATCTTGGCTCTGAAGTCTATGTGCAAGGCGATGTGTAAGTTCCTCGTATATTTTGTCATCCTGGATACCTGTGCTCCTTTACTCTTTTATTTCCCTTATTAATGATATTTCGAATTACTGGTTCATAATATCTTATACCTTTGATAGACTCCAACTTATGGCTATTCTGAGAAACTGAGCATTTTCCCCTTCATGAATCTGTTTGAAGTCCTCTCTTCATCCTTGCTTTCCATGTCAACTATGACCATGGATGTTTCTCAATTCTCTCTCCCTATTTAATTATTTTTTTCCTTCCCGTGCTGCTTTCGGGTGAGTTTGGCATACCTTTTGGTTTAAGCACCACGAACTAAAAGTGATTCAAAAATAGTTCTGCCCACCAAAAATTTGTATTTTTTTCCTCGCTACATACTTTGAACTTTGAAGTGATTTGTTAAGACCCAGTTTTCTTTATAATAATATAACAAAAGACTAAAATCTCCCTTGCTCTCTCAAAAGCACTCCTAATCTGAGCCTTACAAAAGATACCAAAAAACTACCCCCCTCACTCCTCTGCCTCTTTAAATCACCCCAAAAACTTACCTCATGACACTCTTTCCCTAACTAACAATATTCTCTAGATCCCACACATCACATGCCCTCACTCACTATGTGGTCCTCCTTTCCTCTCTTACGAGTATAGAACTTAGTGACCCGGGGCTTATCATGATTTTTCGGTCAGTTACTTCTAAATAGTATTTTGAGATCGATCCGTTTCTAGAAGTGCTTTTTGTTCAAAACCAAACATTGCAATTTTAAGAAGAACTTTTATCATTTAAAGCTACTGAGAAAATTATGATAAACACACTCGAAATTATTAATTCTTCCAATAATGTTTACAGAAAAAGTGCTTTTATTTTAAAAGATACCTTTTTTTAAAAAGTTATCCCAAACTCAACTTCAACTTCACTAGATTGCCGTTTGTACTTGTACAGGCCAGATACACGAAGCATATTTGTAGATATTGGGCTTGGGTTTCATGTGGAGTTCACATGGTCTGAAGCTTTAAATTTCATTTCTCTTAGAGAAGAAAGATTAGCCAGG

mRNA sequence

ATGAATGTAGGAACTGATAACTTTCGCCATGAGAAAGTTCAAAGATTTGAGGAATTTGTTGACCGTCGCTTGAAACCCGACCTGGTTCATGCAATTGCTGAAAGGGACAAAGTGTTTGAGCAGCAGAAGGTGTTTTCAGATCTTCGAAAAAACATCGAAAATCTGGAGAAAAACAGTATAACTAACCTCAGAACGTTGGTCAATCTTGGCTCTGAAGTCTATGTGCAAGGCGATGTGCCAGATACACGAAGCATATTTGTAGATATTGGGCTTGGGTTTCATGTGGAGTTCACATGGTCTGAAGCTTTAAATTTCATTTCTCTTAGAGAAGAAAGATTAGCCAGG

Coding sequence (CDS)

ATGAATGTAGGAACTGATAACTTTCGCCATGAGAAAGTTCAAAGATTTGAGGAATTTGTTGACCGTCGCTTGAAACCCGACCTGGTTCATGCAATTGCTGAAAGGGACAAAGTGTTTGAGCAGCAGAAGGTGTTTTCAGATCTTCGAAAAAACATCGAAAATCTGGAGAAAAACAGTATAACTAACCTCAGAACGTTGGTCAATCTTGGCTCTGAAGTCTATGTGCAAGGCGATGTGCCAGATACACGAAGCATATTTGTAGATATTGGGCTTGGGTTTCATGTGGAGTTCACATGGTCTGAAGCTTTAAATTTCATTTCTCTTAGAGAAGAAAGATTAGCCAGG

Protein sequence

MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERLAR

Homology

[Close]

BLAST of MS023361 vs. NCBI nr
Match: XP_022159095.1 (protein UXT homolog [Momordica charantia] >XP_022159096.1 protein UXT homolog [Momordica charantia])

HSP 1 Score: 229.6 bits (584), Expect = 1.4e-56
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI 60
           MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI
Sbjct: 1   MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERLAR 116
           TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERLAR
Sbjct: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERLAR 115

[Close]

BLAST of MS023361 vs. NCBI nr
Match: XP_004141760.1 (protein UXT homolog [Cucumis sativus] >KGN45393.1 hypothetical protein Csa_016378 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 9.4e-53
Identity = 108/115 (93.91%), Postives = 112/115 (97.39%), Query Frame = 0


Query: 1   MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI 60
           M+V TDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKNSI
Sbjct: 1   MDVVTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERLAR 116
           TN+RTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEAL FISL+EERL R
Sbjct: 61  TNVRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTR 115

[Close]

BLAST of MS023361 vs. NCBI nr
Match: XP_008462175.1 (PREDICTED: protein UXT homolog [Cucumis melo] >KAA0059317.1 protein UXT-like protein [Cucumis melo var. makuwa] >TYK04010.1 protein UXT-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 216.9 bits (551), Expect = 9.4e-53
Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 1   MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI 60
           M+VGTD+FR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKNSI
Sbjct: 1   MDVGTDSFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERLAR 116
           TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEAL FISL+EERL R
Sbjct: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTR 115

[Close]

BLAST of MS023361 vs. NCBI nr
Match: XP_038897562.1 (protein UXT homolog [Benincasa hispida])

HSP 1 Score: 208.8 bits (530), Expect = 2.6e-50
Identity = 103/115 (89.57%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI 60
           M+ G DNFR+EKV+RFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKNSI
Sbjct: 1   MDAGIDNFRNEKVKRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERLAR 116
           TNLR LVNLGSEVY QGDVPDTRSIFVD+GLGFHVEFTWSEAL F+SL+EERLAR
Sbjct: 61  TNLRMLVNLGSEVYGQGDVPDTRSIFVDVGLGFHVEFTWSEALKFLSLKEERLAR 115

[Close]

BLAST of MS023361 vs. NCBI nr
Match: XP_022954004.1 (protein UXT homolog [Cucurbita moschata] >KAG7014064.1 Protein UXT-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 208.4 bits (529), Expect = 3.3e-50
Identity = 104/115 (90.43%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI 60
           M+VG DNFR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKNSI
Sbjct: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERLAR 116
           TNL TLVNLGSEVYVQG+V DTR IFVD+GLGFHVEFTWSEAL FISL+EERLAR
Sbjct: 61  TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLAR 115

[Close]

BLAST of MS023361 vs. ExPASy Swiss-Prot
Match: Q54ND3 (Protein UXT homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0285389 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.9e-17
Identity = 43/102 (42.16%), Postives = 70/102 (68.63%), Query Frame = 0


Query: 9   RHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVN 68
           R + ++ +E F++  L  DL  +I +R+KV E  + + +L+ NIE L +N + +++T++N
Sbjct: 25  RLDSIKYYETFINETLNVDLNKSIEDREKVLENLENYLELKSNIELLIENKMDSMKTMIN 84

Query: 69  LGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLRE 111
           LGSE YV+  V DT  I+VDIGLG HV++T  EA+ FI+ +E
Sbjct: 85  LGSECYVKARVQDTSYIYVDIGLGIHVKYTLEEAIKFINEKE 126

[Close]

BLAST of MS023361 vs. ExPASy Swiss-Prot
Match: A7T0W1 (Protein UXT homolog OS=Nematostella vectensis OX=45351 GN=v1g140887 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-14
Identity = 43/106 (40.57%), Postives = 68/106 (64.15%), Query Frame = 0


Query: 11  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI--TNLRTLVN 70
           EK++++EEF+D+RL  DL      +D++  +   ++ L+ +IE ++K  +   +LR+ V+
Sbjct: 13  EKIRKYEEFLDQRLAKDLEAVFKSQDEIVAKITEYTQLKSSIEQIQKTDLKGKDLRSRVD 72

Query: 71  LGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERLA 115
           LG   + Q  VPD   IF+ +G GF VEFT SEALNFI   E++LA
Sbjct: 73  LGCNFFCQASVPDPSRIFIAVGYGFFVEFTLSEALNFI---EKKLA 115

[Close]

BLAST of MS023361 vs. ExPASy Swiss-Prot
Match: Q9WTZ0 (Protein UXT OS=Mus musculus OX=10090 GN=Uxt PE=1 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 2.0e-13
Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = 0


Query: 11  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLG 70
           EKV R+E F+   L+ DL   +  RDKV+EQ  V+  LR  IE L++ + + L   V+LG
Sbjct: 15  EKVLRYETFISDVLQRDLQKVLDHRDKVYEQLSVYLQLRNVIERLQETNHSELYMQVDLG 74

Query: 71  SEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERL 114
              +V   VPDT  I+V +G GF +E T +EAL FI  +   L
Sbjct: 75  CNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFIDRKSSLL 117

[Close]

BLAST of MS023361 vs. ExPASy Swiss-Prot
Match: Q63ZY7 (Protein UXT OS=Rattus norvegicus OX=10116 GN=Uxt PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.0e-13
Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = 0


Query: 11  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLG 70
           EKV R+E F+   L+ DL   +  RDKV+EQ  V+  LR  IE L++ + + L   V+LG
Sbjct: 15  EKVLRYEAFISDVLQRDLQKVLDHRDKVYEQLSVYLQLRNVIERLQETNHSELYMQVDLG 74

Query: 71  SEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERL 114
              +V   VPDT  I+V +G GF +E T +EAL FI  +   L
Sbjct: 75  CNFFVDTMVPDTSRIYVALGYGFFLELTLAEALKFIDRKSSLL 117

[Close]

BLAST of MS023361 vs. ExPASy Swiss-Prot
Match: Q32P97 (Protein UXT OS=Bos taurus OX=9913 GN=UXT PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.2e-12
Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 11  EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVNLG 70
           EKV R+E F+   L+ DL   +  RDKV+EQ   +  LR  IE L++ + + L   V+LG
Sbjct: 15  EKVLRYEAFISDVLQRDLQKVLDHRDKVYEQLAKYLQLRNVIERLQEANHSELYMQVDLG 74

Query: 71  SEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERL 114
              +V   VPDT  I+V +G GF +E T +EAL FI  +   L
Sbjct: 75  CNFFVDTVVPDTSRIYVALGYGFFLELTLAEALKFIDRKSSLL 117

[Close]

BLAST of MS023361 vs. ExPASy TrEMBL
Match: A0A6J1E2W3 (protein UXT homolog OS=Momordica charantia OX=3673 GN=LOC111025536 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 6.8e-57
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI 60
           MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI
Sbjct: 1   MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERLAR 116
           TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERLAR
Sbjct: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERLAR 115

[Close]

BLAST of MS023361 vs. ExPASy TrEMBL
Match: A0A5D3BXW7 (Protein UXT-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002080 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.5e-53
Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 1   MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI 60
           M+VGTD+FR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKNSI
Sbjct: 1   MDVGTDSFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERLAR 116
           TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEAL FISL+EERL R
Sbjct: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTR 115

[Close]

BLAST of MS023361 vs. ExPASy TrEMBL
Match: A0A0A0K7F1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447080 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.5e-53
Identity = 108/115 (93.91%), Postives = 112/115 (97.39%), Query Frame = 0


Query: 1   MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI 60
           M+V TDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKNSI
Sbjct: 1   MDVVTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERLAR 116
           TN+RTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEAL FISL+EERL R
Sbjct: 61  TNVRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTR 115

[Close]

BLAST of MS023361 vs. ExPASy TrEMBL
Match: A0A1S3CHV4 (protein UXT homolog OS=Cucumis melo OX=3656 GN=LOC103500599 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.5e-53
Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 1   MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI 60
           M+VGTD+FR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKNSI
Sbjct: 1   MDVGTDSFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERLAR 116
           TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEAL FISL+EERL R
Sbjct: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALKFISLKEERLTR 115

[Close]

BLAST of MS023361 vs. ExPASy TrEMBL
Match: A0A6J1GRK9 (protein UXT homolog OS=Cucurbita moschata OX=3662 GN=LOC111456394 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.6e-50
Identity = 104/115 (90.43%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MNVGTDNFRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSI 60
           M+VG DNFR+EKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLR+NIENLEKNSI
Sbjct: 1   MDVGIDNFRNEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRRNIENLEKNSI 60

Query: 61  TNLRTLVNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREERLAR 116
           TNL TLVNLGSEVYVQG+V DTR IFVD+GLGFHVEFTWSEAL FISL+EERLAR
Sbjct: 61  TNLTTLVNLGSEVYVQGNVADTRRIFVDVGLGFHVEFTWSEALKFISLKEERLAR 115

[Close]

BLAST of MS023361 vs. TAIR 10
Match: AT1G26660.1 (Prefoldin chaperone subunit family protein )

HSP 1 Score: 135.6 bits (340), Expect = 2.6e-32
Identity = 65/104 (62.50%), Postives = 83/104 (79.81%), Query Frame = 0


Query: 9   RHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVFSDLRKNIENLEKNSITNLRTLVN 68
           R + +Q  EE +D+ LK  LVHA A RDK+FE+QK  SDLRKN+E LEKN + +L+T VN
Sbjct: 5   RQKDLQLLEEIIDKGLKQKLVHATASRDKIFEEQKTLSDLRKNLETLEKNGVNSLKTRVN 64

Query: 69  LGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREER 113
           LGSEVY+Q +VPDTR IF+D+GLGF+VEFT  EAL++I+ REER
Sbjct: 65  LGSEVYMQAEVPDTRHIFMDVGLGFYVEFTRQEALDYIAQREER 108

[Close]

BLAST of MS023361 vs. TAIR 10
Match: AT1G26660.2 (Prefoldin chaperone subunit family protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.2e-21
Identity = 55/106 (51.89%), Postives = 71/106 (66.98%), Query Frame = 0


Query: 8   FRHEKVQRFEEFVDRRLKPDLVHAIAERDKVFEQQKVF-SDLRKNIENLEKNSITNLRTL 67
           FR   V  F  F   R   +  H I     ++ +   F SDLRKN+E LEKN + +L+T 
Sbjct: 32  FRFIVVSAFVGFAGTRSLKNKKHCIL----LYREDSSFSSDLRKNLETLEKNGVNSLKTR 91

Query: 68  VNLGSEVYVQGDVPDTRSIFVDIGLGFHVEFTWSEALNFISLREER 113
           VNLGSEVY+Q +VPDTR IF+D+GLGF+VEFT  EAL++I+ REER
Sbjct: 92  VNLGSEVYMQAEVPDTRHIFMDVGLGFYVEFTRQEALDYIAQREER 133

The following BLAST results are available for this feature:

BLAST of MS023361 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159095.1	1.4e-56	100.00	protein UXT homolog [Momordica charantia] >XP_022159096.1 protein UXT homolog [M...	[more]
XP_004141760.1	9.4e-53	93.91	protein UXT homolog [Cucumis sativus] >KGN45393.1 hypothetical protein Csa_01637...	[more]
XP_008462175.1	9.4e-53	93.91	PREDICTED: protein UXT homolog [Cucumis melo] >KAA0059317.1 protein UXT-like pro...	[more]
XP_038897562.1	2.6e-50	89.57	protein UXT homolog [Benincasa hispida]	[more]
XP_022954004.1	3.3e-50	90.43	protein UXT homolog [Cucurbita moschata] >KAG7014064.1 Protein UXT-like protein ...	[more]

BLAST of MS023361 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54ND3	3.9e-17	42.16	Protein UXT homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0285389 PE=3 SV...	[more]
A7T0W1	1.1e-14	40.57	Protein UXT homolog OS=Nematostella vectensis OX=45351 GN=v1g140887 PE=3 SV=1	[more]
Q9WTZ0	2.0e-13	41.75	Protein UXT OS=Mus musculus OX=10090 GN=Uxt PE=1 SV=2	[more]
Q63ZY7	2.0e-13	41.75	Protein UXT OS=Rattus norvegicus OX=10116 GN=Uxt PE=2 SV=1	[more]
Q32P97	2.2e-12	40.78	Protein UXT OS=Bos taurus OX=9913 GN=UXT PE=2 SV=1	[more]

BLAST of MS023361 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E2W3	6.8e-57	100.00	protein UXT homolog OS=Momordica charantia OX=3673 GN=LOC111025536 PE=4 SV=1	[more]
A0A5D3BXW7	4.5e-53	93.91	Protein UXT-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0K7F1	4.5e-53	93.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447080 PE=4 SV=1	[more]
A0A1S3CHV4	4.5e-53	93.91	protein UXT homolog OS=Cucumis melo OX=3656 GN=LOC103500599 PE=4 SV=1	[more]
A0A6J1GRK9	1.6e-50	90.43	protein UXT homolog OS=Cucurbita moschata OX=3662 GN=LOC111456394 PE=4 SV=1	[more]

BLAST of MS023361 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26660.1	2.6e-32	62.50	Prefoldin chaperone subunit family protein	[more]
AT1G26660.2	1.2e-21	51.89	Prefoldin chaperone subunit family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 38..58
None	No IPR available	PANTHER	PTHR13345:SF4	PROTEIN UXT	coord: 8..115
None	No IPR available	PANTHER	PTHR13345	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10	coord: 8..115
None	No IPR available	SUPERFAMILY	46579	Prefoldin	coord: 41..112
IPR009053	Prefoldin	GENE3D	1.10.287.370		coord: 3..115 e-value: 2.9E-22 score: 80.9
IPR004127	Prefoldin alpha-like	PFAM	PF02996	Prefoldin	coord: 30..113 e-value: 2.8E-14 score: 53.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023361.1	MS023361.1	mRNA