MS023237 (gene) Bitter gourd (TR) v1

Overview


Name	MS023237
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NAC domain-containing protein
Location	scaffold78: 1248789 .. 1249253 (+)
RNA-Seq Expression	MS023237
Synteny	MS023237

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCGACAGAGAAGAAGATTTGCATTCAATTTTTATGGATATGGAAATGGATAAGAAGTGTCCTTTTGGCATAAGAGGTGTTGAATTCAATCCGAGTCACGAAGCTCTGTTGGTTGATTATCTTTACAACAAAGTACATGGCCACCCCTATTGTTTAGAAGCTGTCAAAGATTTCGACCTCTATGGCAACCATGAGCCATGGCAAGTTTTCGACCTGTTTGGAGGAGTCGATGGCCAAGATCTCTACTTCTTCACCCAGCTCAAGAGGAAGTGGCCTACCAAACAAGACTCCTCTCGCATCAGCCGTCGAGTTGGTACCAATGGCGGTACTTGGAGCGGTGAGAATTCTGAGACTCCCATTTTATCTTCCGTCACTGGTGGTCTTATTGGTTTCTCCAAACGCTTCCGTTATGAGAATGGTGGATTAGAACACCATGGTGAGTGGATTATGAAAGAGTTTAGTTTG

mRNA sequence

AGCGACAGAGAAGAAGATTTGCATTCAATTTTTATGGATATGGAAATGGATAAGAAGTGTCCTTTTGGCATAAGAGGTGTTGAATTCAATCCGAGTCACGAAGCTCTGTTGGTTGATTATCTTTACAACAAAGTACATGGCCACCCCTATTGTTTAGAAGCTGTCAAAGATTTCGACCTCTATGGCAACCATGAGCCATGGCAAGTTTTCGACCTGTTTGGAGGAGTCGATGGCCAAGATCTCTACTTCTTCACCCAGCTCAAGAGGAAGTGGCCTACCAAACAAGACTCCTCTCGCATCAGCCGTCGAGTTGGTACCAATGGCGGTACTTGGAGCGGTGAGAATTCTGAGACTCCCATTTTATCTTCCGTCACTGGTGGTCTTATTGGTTTCTCCAAACGCTTCCGTTATGAGAATGGTGGATTAGAACACCATGGTGAGTGGATTATGAAAGAGTTTAGTTTG

Coding sequence (CDS)

AGCGACAGAGAAGAAGATTTGCATTCAATTTTTATGGATATGGAAATGGATAAGAAGTGTCCTTTTGGCATAAGAGGTGTTGAATTCAATCCGAGTCACGAAGCTCTGTTGGTTGATTATCTTTACAACAAAGTACATGGCCACCCCTATTGTTTAGAAGCTGTCAAAGATTTCGACCTCTATGGCAACCATGAGCCATGGCAAGTTTTCGACCTGTTTGGAGGAGTCGATGGCCAAGATCTCTACTTCTTCACCCAGCTCAAGAGGAAGTGGCCTACCAAACAAGACTCCTCTCGCATCAGCCGTCGAGTTGGTACCAATGGCGGTACTTGGAGCGGTGAGAATTCTGAGACTCCCATTTTATCTTCCGTCACTGGTGGTCTTATTGGTTTCTCCAAACGCTTCCGTTATGAGAATGGTGGATTAGAACACCATGGTGAGTGGATTATGAAAGAGTTTAGTTTG

Protein sequence

SDREEDLHSIFMDMEMDKKCPFGIRGVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSSVTGGLIGFSKRFRYENGGLEHHGEWIMKEFSL

Homology

[Close]

BLAST of MS023237 vs. NCBI nr
Match: KAG6571617.1 (NAC domain-containing protein JA2L, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-30
Identity = 74/133 (55.64%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 26  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFT 85
           GV F P+ + LL  YL+ K+HG PY   AV D DLYG  EPW+++  FGG DG+DLYFFT
Sbjct: 12  GVRFRPTDQQLL-QYLHWKIHGQPYFRRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFT 71

Query: 86  QLKRKWPTK-QDSSRISRRVGTNGGTWSGENSETPILSSVTG-GLIGFSKRFRYENGGL- 145
           +LKR      + S+ I+R+VG   GTWSGENS +PI ++ T   +IG+ KRFRYEN  L 
Sbjct: 72  KLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDKTIIGYCKRFRYENAQLP 131

Query: 146 EHHGEWIMKEFSL 156
           EHHGEWIM E+SL
Sbjct: 132 EHHGEWIMHEYSL 143

[Close]

BLAST of MS023237 vs. NCBI nr
Match: XP_004142192.1 (NAC domain-containing protein 83 [Cucumis sativus] >KGN54288.1 hypothetical protein Csa_017977 [Cucumis sativus])

HSP 1 Score: 143.3 bits (360), Expect = 1.8e-30
Identity = 72/133 (54.14%), Postives = 95/133 (71.43%), Query Frame = 0


Query: 26  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFT 85
           GV+F P+ + LL  YL+ K++G PY   AV DFDLYG  EPW+++  FGG+DG+DLYFFT
Sbjct: 17  GVKFRPTDQQLL-HYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFT 76

Query: 86  QLKRKWPTKQD-SSRISRRVGTNGGTWSGENSETPI-LSSVTGGLIGFSKRFRYENGGL- 145
           +LKR      + S+ I+R++G   GTWSGENS +PI ++     +IG+ KRFRYEN  L 
Sbjct: 77  KLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQIIGYRKRFRYENESLE 136

Query: 146 EHHGEWIMKEFSL 156
           EHHGEWIM E+SL
Sbjct: 137 EHHGEWIMHEYSL 148

[Close]

BLAST of MS023237 vs. NCBI nr
Match: XP_022963781.1 (NAC domain-containing protein 30-like [Cucurbita moschata])

HSP 1 Score: 142.9 bits (359), Expect = 2.3e-30
Identity = 75/139 (53.96%), Postives = 93/139 (66.91%), Query Frame = 0


Query: 20  CPFGIRGVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQ 79
           CP    GV F P+ + LL  YL  K+HG PY   AV D DLYG  EPW+++  FGG DG+
Sbjct: 6   CPLLPVGVRFRPTDQQLL-QYLIWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGE 65

Query: 80  DLYFFTQLKRKWPTK-QDSSRISRRVGTNGGTWSGENSETPILSSVTG-GLIGFSKRFRY 139
           DLYFFT+LKR      + S+ I+R+VG   GTWSGENS + I ++ T   +IG+ KRFRY
Sbjct: 66  DLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASSIFATKTDKTIIGYCKRFRY 125

Query: 140 ENGGL-EHHGEWIMKEFSL 156
           EN  L EHHGEWIM E+SL
Sbjct: 126 ENAQLPEHHGEWIMHEYSL 143

[Close]

BLAST of MS023237 vs. NCBI nr
Match: XP_023511534.1 (NAC domain-containing protein 72-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142.9 bits (359), Expect = 2.3e-30
Identity = 74/133 (55.64%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 26  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFT 85
           GV F P+   LL  YL+ K+HG PY   AV D DLYG  EPW+++  FGG+DG+DLYFFT
Sbjct: 12  GVRFRPTDPQLL-QYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEDLYFFT 71

Query: 86  QLKRKWPTK-QDSSRISRRVGTNGGTWSGENSETPILSSVTG-GLIGFSKRFRYENGGL- 145
           +LKR      + S+ I+R+VG   GTWSGENS +PI ++ T   +IG+ KRFRYEN  L 
Sbjct: 72  KLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDKTIIGYCKRFRYENVQLP 131

Query: 146 EHHGEWIMKEFSL 156
           EHHGEWIM E+SL
Sbjct: 132 EHHGEWIMHEYSL 143

[Close]

BLAST of MS023237 vs. NCBI nr
Match: TYK12066.1 (NAC domain-containing protein 83-like [Cucumis melo var. makuwa])

HSP 1 Score: 142.5 bits (358), Expect = 3.0e-30
Identity = 72/133 (54.14%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 26  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFT 85
           GV+F P+ + LL  YLY K++G PY   A+ DFDLYG  EPW+++  F G+DG+DLYFFT
Sbjct: 17  GVKFRPTDQQLL-HYLYCKINGQPYFQGAIFDFDLYGGTEPWEIWQSFKGIDGEDLYFFT 76

Query: 86  QLKRKWPT-KQDSSRISRRVGTNGGTWSGENSETPILSSVTG-GLIGFSKRFRYENGGL- 145
           +LKR      Q S+ ISR++G   GTWSGENS TPI ++     +IG+ KRFRYEN  + 
Sbjct: 77  KLKRSTKNCGQLSAHISRKIGLANGTWSGENSATPIFANEDDEQIIGYRKRFRYENDQVE 136

Query: 146 EHHGEWIMKEFSL 156
           EHHGEWIM E+ L
Sbjct: 137 EHHGEWIMHEYRL 148

[Close]

BLAST of MS023237 vs. ExPASy Swiss-Prot
Match: Q9LVA1 (NAC domain-containing protein 101 OS=Arabidopsis thaliana OX=3702 GN=NAC101 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08
Identity = 42/134 (31.34%), Postives = 63/134 (47.01%), Query Frame = 0


Query: 26  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQ--DLYF 85
           G  F+P+ E L+  YL NKV      ++ +KD DLY   EPW + +L G   G+  + YF
Sbjct: 10  GYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLY-KIEPWDIQELCGRGTGEEREWYF 69

Query: 86  FTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSSVTGGLIGFSKRFRYENGGLE 145
           F+   +K+PT   ++R      T  G W     +  I S     L+G  K   +  G   
Sbjct: 70  FSHKDKKYPTGTRTNR-----ATGSGFWKATGRDKAIYSKQE--LVGMRKTLVFYKGRAP 129

Query: 146 H--HGEWIMKEFSL 156
           +    +WIM E+ L
Sbjct: 130 NGQKSDWIMHEYRL 135

[Close]

BLAST of MS023237 vs. ExPASy Swiss-Prot
Match: Q9SQL0 (NAC domain-containing protein JA2 OS=Solanum lycopersicum OX=4081 GN=JA2 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07
Identity = 43/132 (32.58%), Postives = 62/132 (46.97%), Query Frame = 0


Query: 26  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFT 85
           G  F P+ E LLV YL  KV GH + L+ + + DLY   +PW V         ++ YFF+
Sbjct: 17  GFRFYPTDEELLVQYLCKKVAGHDFPLQIIGEIDLY-KFDPW-VLPSKATFGEKEWYFFS 76

Query: 86  QLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSSVTGGLIGFSKRFRYENGGLEHH 145
              RK+P   + SR +R  G+  G W    ++  I S   G  +G  K   +  G     
Sbjct: 77  PRDRKYP---NGSRPNRVAGS--GYWKATGTDKVITSQ--GRKVGIKKALVFYVGKAPKG 136

Query: 146 GE--WIMKEFSL 156
            +  WIM E+ L
Sbjct: 137 SKTNWIMHEYRL 139

[Close]

BLAST of MS023237 vs. ExPASy Swiss-Prot
Match: Q9LDY8 (NAC domain-containing protein 55 OS=Arabidopsis thaliana OX=3702 GN=NAC055 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-07
Identity = 43/134 (32.09%), Postives = 64/134 (47.76%), Query Frame = 0


Query: 26  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFD--LFGGVDGQDLYF 85
           G  F P+ E L+V+YL  K  GH + L+ + + DLY   +PW +    LFG    ++ YF
Sbjct: 17  GFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLY-KFDPWVLPSKALFG---EKEWYF 76

Query: 86  FTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSSVTGGLIGFSKRFRYENGGLE 145
           F+   RK+P   + SR +R  G+  G W    ++  I  S  G  +G  K   +  G   
Sbjct: 77  FSPRDRKYP---NGSRPNRVAGS--GYWKATGTDKVI--STEGRRVGIKKALVFYIGKAP 136

Query: 146 H--HGEWIMKEFSL 156
                 WIM E+ L
Sbjct: 137 KGTKTNWIMHEYRL 139

[Close]

BLAST of MS023237 vs. ExPASy Swiss-Prot
Match: Q93VY3 (NAC domain-containing protein 72 OS=Arabidopsis thaliana OX=3702 GN=NAC072 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-07
Identity = 44/134 (32.84%), Postives = 64/134 (47.76%), Query Frame = 0


Query: 26  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFD--LFGGVDGQDLYF 85
           G  F P+ E LLV YL  KV G+ + L+ + D DLY   +PW +    LFG    ++ YF
Sbjct: 17  GFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLY-KFDPWDLPSKALFG---EKEWYF 76

Query: 86  FTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSSVTGGLIGFSKRFRYENGGLE 145
           F+   RK+P   + SR +R  G+  G W    ++  I  +  G  +G  K   +  G   
Sbjct: 77  FSPRDRKYP---NGSRPNRVAGS--GYWKATGTDKII--TADGRRVGIKKALVFYAGKAP 136

Query: 146 H--HGEWIMKEFSL 156
                 WIM E+ L
Sbjct: 137 KGTKTNWIMHEYRL 139

[Close]

BLAST of MS023237 vs. ExPASy Swiss-Prot
Match: A0A3Q7HH64 (NAC domain-containing protein JA2L OS=Solanum lycopersicum OX=4081 GN=JA2L PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.9e-07
Identity = 43/134 (32.09%), Postives = 64/134 (47.76%), Query Frame = 0


Query: 26  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFD--LFGGVDGQDLYF 85
           G  F P+ E LLV YL  KV GH + L+ + + DLY   +PW +    +FG    ++ YF
Sbjct: 17  GFRFYPTDEELLVQYLCRKVAGHDFSLQIIAEIDLY-KFDPWVLPSKAIFG---EKEWYF 76

Query: 86  FTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSSVTGGLIGFSKRFRYENGGLE 145
           F+   RK+P   + SR +R  G+  G W    ++  I  +  G  +G  K   +  G   
Sbjct: 77  FSPRDRKYP---NGSRPNRVAGS--GYWKATGTDKVI--TTDGRKVGIKKALVFYIGKAP 136

Query: 146 H--HGEWIMKEFSL 156
                 WIM E+ L
Sbjct: 137 KGTKTNWIMHEYRL 139

[Close]

BLAST of MS023237 vs. ExPASy TrEMBL
Match: A0A0A0KXM1 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296900 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 8.6e-31
Identity = 72/133 (54.14%), Postives = 95/133 (71.43%), Query Frame = 0


Query: 26  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFT 85
           GV+F P+ + LL  YL+ K++G PY   AV DFDLYG  EPW+++  FGG+DG+DLYFFT
Sbjct: 17  GVKFRPTDQQLL-HYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFT 76

Query: 86  QLKRKWPTKQD-SSRISRRVGTNGGTWSGENSETPI-LSSVTGGLIGFSKRFRYENGGL- 145
           +LKR      + S+ I+R++G   GTWSGENS +PI ++     +IG+ KRFRYEN  L 
Sbjct: 77  KLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQIIGYRKRFRYENESLE 136

Query: 146 EHHGEWIMKEFSL 156
           EHHGEWIM E+SL
Sbjct: 137 EHHGEWIMHEYSL 148

[Close]

BLAST of MS023237 vs. ExPASy TrEMBL
Match: A0A6J1HH13 (NAC domain-containing protein 30-like OS=Cucurbita moschata OX=3662 GN=LOC111463973 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.1e-30
Identity = 75/139 (53.96%), Postives = 93/139 (66.91%), Query Frame = 0


Query: 20  CPFGIRGVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQ 79
           CP    GV F P+ + LL  YL  K+HG PY   AV D DLYG  EPW+++  FGG DG+
Sbjct: 6   CPLLPVGVRFRPTDQQLL-QYLIWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGE 65

Query: 80  DLYFFTQLKRKWPTK-QDSSRISRRVGTNGGTWSGENSETPILSSVTG-GLIGFSKRFRY 139
           DLYFFT+LKR      + S+ I+R+VG   GTWSGENS + I ++ T   +IG+ KRFRY
Sbjct: 66  DLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASSIFATKTDKTIIGYCKRFRY 125

Query: 140 ENGGL-EHHGEWIMKEFSL 156
           EN  L EHHGEWIM E+SL
Sbjct: 126 ENAQLPEHHGEWIMHEYSL 143

[Close]

BLAST of MS023237 vs. ExPASy TrEMBL
Match: A0A5D3CNQ3 (NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00810 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.5e-30
Identity = 72/133 (54.14%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 26  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFT 85
           GV+F P+ + LL  YLY K++G PY   A+ DFDLYG  EPW+++  F G+DG+DLYFFT
Sbjct: 17  GVKFRPTDQQLL-HYLYCKINGQPYFQGAIFDFDLYGGTEPWEIWQSFKGIDGEDLYFFT 76

Query: 86  QLKRKWPT-KQDSSRISRRVGTNGGTWSGENSETPILSSVTG-GLIGFSKRFRYENGGL- 145
           +LKR      Q S+ ISR++G   GTWSGENS TPI ++     +IG+ KRFRYEN  + 
Sbjct: 77  KLKRSTKNCGQLSAHISRKIGLANGTWSGENSATPIFANEDDEQIIGYRKRFRYENDQVE 136

Query: 146 EHHGEWIMKEFSL 156
           EHHGEWIM E+ L
Sbjct: 137 EHHGEWIMHEYRL 148

[Close]

BLAST of MS023237 vs. ExPASy TrEMBL
Match: A0A5A7TC54 (NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold477G00130 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.5e-30
Identity = 72/133 (54.14%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 26  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFT 85
           GV+F P+ + LL  YLY K++G PY   A+ DFDLYG  EPW+++  F G+DG+DLYFFT
Sbjct: 17  GVKFRPTDQQLL-HYLYCKINGQPYFQGAIFDFDLYGGTEPWEIWQSFKGIDGEDLYFFT 76

Query: 86  QLKRKWPT-KQDSSRISRRVGTNGGTWSGENSETPILSSVTG-GLIGFSKRFRYENGGL- 145
           +LKR      Q S+ ISR++G   GTWSGENS TPI ++     +IG+ KRFRYEN  + 
Sbjct: 77  KLKRSTKNCGQLSAHISRKIGLANGTWSGENSATPIFANEDDEQIIGYRKRFRYENDQVE 136

Query: 146 EHHGEWIMKEFSL 156
           EHHGEWIM E+ L
Sbjct: 137 EHHGEWIMHEYRL 148

[Close]

BLAST of MS023237 vs. ExPASy TrEMBL
Match: A0A5D3CL63 (NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00650 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.5e-30
Identity = 72/133 (54.14%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 26  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFT 85
           GV+F P+ + LL  YLY K++G PY   A+ DFDLYG  EPW+++  F G+DG+DLYFFT
Sbjct: 17  GVKFRPTDQQLL-HYLYCKINGQPYFQGAIFDFDLYGGTEPWEIWQSFKGIDGEDLYFFT 76

Query: 86  QLKRKWPT-KQDSSRISRRVGTNGGTWSGENSETPILSSVTG-GLIGFSKRFRYENGGL- 145
           +LKR      Q S+ ISR++G   GTWSGENS TPI ++     +IG+ KRFRYEN  + 
Sbjct: 77  KLKRSTKNCGQLSAHISRKIGLANGTWSGENSATPIFANEDDEQIIGYRKRFRYENDQVE 136

Query: 146 EHHGEWIMKEFSL 156
           EHHGEWIM E+ L
Sbjct: 137 EHHGEWIMHEYRL 148

[Close]

BLAST of MS023237 vs. TAIR 10
Match: AT2G24430.1 (NAC domain containing protein 38 )

HSP 1 Score: 65.1 bits (157), Expect = 5.7e-11
Identity = 42/133 (31.58%), Postives = 65/133 (48.87%), Query Frame = 0


Query: 26  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFT 85
           G  F+P+ E L+  YL NK+    +  +A+ D DL    EPW++ +    + G++ YFF+
Sbjct: 19  GFRFHPTDEELISYYLVNKIADQNFTGKAIADVDL-NKSEPWELPEK-AKMGGKEWYFFS 78

Query: 86  QLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSSVTGGLIGFSKRFRYENGGLEHH 145
              RK+PT   ++R      TN G W     +  I +S T  L+G  K   +  G     
Sbjct: 79  LRDRKYPTGVRTNR-----ATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRAP-R 138

Query: 146 GE---WIMKEFSL 156
           GE   W+M E+ L
Sbjct: 139 GEKTCWVMHEYRL 143

[Close]

BLAST of MS023237 vs. TAIR 10
Match: AT2G24430.2 (NAC domain containing protein 38 )

HSP 1 Score: 65.1 bits (157), Expect = 5.7e-11
Identity = 42/133 (31.58%), Postives = 65/133 (48.87%), Query Frame = 0


Query: 26  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQDLYFFT 85
           G  F+P+ E L+  YL NK+    +  +A+ D DL    EPW++ +    + G++ YFF+
Sbjct: 19  GFRFHPTDEELISYYLVNKIADQNFTGKAIADVDL-NKSEPWELPEK-AKMGGKEWYFFS 78

Query: 86  QLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSSVTGGLIGFSKRFRYENGGLEHH 145
              RK+PT   ++R      TN G W     +  I +S T  L+G  K   +  G     
Sbjct: 79  LRDRKYPTGVRTNR-----ATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRAP-R 138

Query: 146 GE---WIMKEFSL 156
           GE   W+M E+ L
Sbjct: 139 GEKTCWVMHEYRL 143

[Close]

BLAST of MS023237 vs. TAIR 10
Match: AT5G62380.1 (NAC-domain protein 101 )

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09
Identity = 42/134 (31.34%), Postives = 63/134 (47.01%), Query Frame = 0


Query: 26  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFDLFGGVDGQ--DLYF 85
           G  F+P+ E L+  YL NKV      ++ +KD DLY   EPW + +L G   G+  + YF
Sbjct: 10  GYRFHPTDEELVDYYLKNKVAFPGMQVDVIKDVDLY-KIEPWDIQELCGRGTGEEREWYF 69

Query: 86  FTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSSVTGGLIGFSKRFRYENGGLE 145
           F+   +K+PT   ++R      T  G W     +  I S     L+G  K   +  G   
Sbjct: 70  FSHKDKKYPTGTRTNR-----ATGSGFWKATGRDKAIYSKQE--LVGMRKTLVFYKGRAP 129

Query: 146 H--HGEWIMKEFSL 156
           +    +WIM E+ L
Sbjct: 130 NGQKSDWIMHEYRL 135

[Close]

BLAST of MS023237 vs. TAIR 10
Match: AT3G15500.1 (NAC domain containing protein 3 )

HSP 1 Score: 57.0 bits (136), Expect = 1.6e-08
Identity = 43/134 (32.09%), Postives = 64/134 (47.76%), Query Frame = 0


Query: 26  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFD--LFGGVDGQDLYF 85
           G  F P+ E L+V+YL  K  GH + L+ + + DLY   +PW +    LFG    ++ YF
Sbjct: 17  GFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLY-KFDPWVLPSKALFG---EKEWYF 76

Query: 86  FTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSSVTGGLIGFSKRFRYENGGLE 145
           F+   RK+P   + SR +R  G+  G W    ++  I  S  G  +G  K   +  G   
Sbjct: 77  FSPRDRKYP---NGSRPNRVAGS--GYWKATGTDKVI--STEGRRVGIKKALVFYIGKAP 136

Query: 146 H--HGEWIMKEFSL 156
                 WIM E+ L
Sbjct: 137 KGTKTNWIMHEYRL 139

[Close]

BLAST of MS023237 vs. TAIR 10
Match: AT4G27410.2 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 57.0 bits (136), Expect = 1.6e-08
Identity = 44/134 (32.84%), Postives = 64/134 (47.76%), Query Frame = 0


Query: 26  GVEFNPSHEALLVDYLYNKVHGHPYCLEAVKDFDLYGNHEPWQVFD--LFGGVDGQDLYF 85
           G  F P+ E LLV YL  KV G+ + L+ + D DLY   +PW +    LFG    ++ YF
Sbjct: 17  GFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLY-KFDPWDLPSKALFG---EKEWYF 76

Query: 86  FTQLKRKWPTKQDSSRISRRVGTNGGTWSGENSETPILSSVTGGLIGFSKRFRYENGGLE 145
           F+   RK+P   + SR +R  G+  G W    ++  I  +  G  +G  K   +  G   
Sbjct: 77  FSPRDRKYP---NGSRPNRVAGS--GYWKATGTDKII--TADGRRVGIKKALVFYAGKAP 136

Query: 146 H--HGEWIMKEFSL 156
                 WIM E+ L
Sbjct: 137 KGTKTNWIMHEYRL 139

The following BLAST results are available for this feature:

BLAST of MS023237 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571617.1	1.0e-30	55.64	NAC domain-containing protein JA2L, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_004142192.1	1.8e-30	54.14	NAC domain-containing protein 83 [Cucumis sativus] >KGN54288.1 hypothetical prot...	[more]
XP_022963781.1	2.3e-30	53.96	NAC domain-containing protein 30-like [Cucurbita moschata]	[more]
XP_023511534.1	2.3e-30	55.64	NAC domain-containing protein 72-like [Cucurbita pepo subsp. pepo]	[more]
TYK12066.1	3.0e-30	54.14	NAC domain-containing protein 83-like [Cucumis melo var. makuwa]	[more]

BLAST of MS023237 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVA1	1.5e-08	31.34	NAC domain-containing protein 101 OS=Arabidopsis thaliana OX=3702 GN=NAC101 PE=2...	[more]
Q9SQL0	1.3e-07	32.58	NAC domain-containing protein JA2 OS=Solanum lycopersicum OX=4081 GN=JA2 PE=2 SV...	[more]
Q9LDY8	2.2e-07	32.09	NAC domain-containing protein 55 OS=Arabidopsis thaliana OX=3702 GN=NAC055 PE=2 ...	[more]
Q93VY3	2.2e-07	32.84	NAC domain-containing protein 72 OS=Arabidopsis thaliana OX=3702 GN=NAC072 PE=2 ...	[more]
A0A3Q7HH64	2.9e-07	32.09	NAC domain-containing protein JA2L OS=Solanum lycopersicum OX=4081 GN=JA2L PE=2 ...	[more]

BLAST of MS023237 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXM1	8.6e-31	54.14	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296900 PE=4 SV...	[more]
A0A6J1HH13	1.1e-30	53.96	NAC domain-containing protein 30-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A5D3CNQ3	1.5e-30	54.14	NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7TC54	1.5e-30	54.14	NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3CL63	1.5e-30	54.14	NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of MS023237 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24430.1	5.7e-11	31.58	NAC domain containing protein 38	[more]
AT2G24430.2	5.7e-11	31.58	NAC domain containing protein 38	[more]
AT5G62380.1	1.1e-09	31.34	NAC-domain protein 101	[more]
AT3G15500.1	1.6e-08	32.09	NAC domain containing protein 3	[more]
AT4G27410.2	1.6e-08	32.84	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 26..155 e-value: 9.2E-18 score: 65.4
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 23..155 score: 24.727768
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 33..155 e-value: 5.1E-22 score: 80.3
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 19..155
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 25..155
None	No IPR available	PANTHER	PTHR31989:SF220	NAC TRANSCRIPTION FACTOR-LIKE PROTEIN	coord: 25..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023237.1	MS023237.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding