MS023153 (gene) Bitter gourd (TR) v1

Overview


Name	MS023153
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Tify domain-containing protein
Location	scaffold78: 491264 .. 492316 (+)
RNA-Seq Expression	MS023153
Synteny	MS023153

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAGCTCCTCCGGATTCTCTCAGGCGTCGTCGGCGCCCAACTCGCCGGAGAAGCGCGGCTTTGCTCCCGCCGCAGGTGGTCTGGTTTCTGGGAGAGATCTGAATCGGGGTTTCTCGTCCAATCTCCGGCGAGGAAACGGTGAGGATTTGATTTTGTTTTTGTTTTCTGGGTTGGGATTAATTTTGGGGGTTTTGTCTTGAAATCGAAGGGGATGGTTGTTGATGAATCTTTTCTGAATCTGGGAATTTCAGGGTCGGCGCCGGAAATTTTCTACCGGCCGGAGAAATTGGGGAATCTCAAATCCTTGGATTTGTTCCCTCAACATGCCGGCGTCGGTCTCGCCGACGTCGAATCGAGGTATGCTCTGTTCCGCTCCGCCGTGACGAAATTAGGATTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTAACGGAAGGTTTTGTTGCAGGGTCTGTAAATCTGCCATGGCGGCGCCTCAAACATCCCAGATGACGATATTCTACGGCGGCCGGGTTTTTGTGTTCAACAATTTTTCGGCGGACAGCGCCGGAGAAGTGATGCTGCTGGCCAGCCGGGAAAGCTCCAAATCGAACAACCCCCTTTACGGCCGACCCATCTTGGTCGGAACGCCGGCGGATTCATTAAGCTCGACTTCCCCTGCTTCTCCGCCGCCGCCGCCGCCGCCTCAGGCCGTTAACTGTGGTAATTAACAGAAACTCCCTCTCTGGTTTCGGTAATTTTTCTCGTTTTCTGATTCCCGAGCTTCCATTTCTGCAGCTCTGCCGATTGCTCGTAAGGCTTCGATTCAGCGTTTCTTGGAGAAGCGAAAAGACAGGTACGGTTTCAATTTTCTCTGTTCTGAAGCAAACTCGTATTTTTCTTCAATTTCCGCCATGGAAATAGCTTAAATTTGGTCCTCTGTTTTGGACAGGCTGACCGCGAGAGCGCCGTACCAGAGCTGCCCGCTGACCGGCGGCCCGAGGAAGGGCGGCGCCGGCGAGAATGCGTGGCTGGGTTTGGCTGTGCAACGGCAGCAT

mRNA sequence

ATGTCGAGCTCCTCCGGATTCTCTCAGGCGTCGTCGGCGCCCAACTCGCCGGAGAAGCGCGGCTTTGCTCCCGCCGCAGGTGGTCTGGTTTCTGGGAGAGATCTGAATCGGGGTTTCTCGTCCAATCTCCGGCGAGGAAACGGGTCGGCGCCGGAAATTTTCTACCGGCCGGAGAAATTGGGGAATCTCAAATCCTTGGATTTGTTCCCTCAACATGCCGGCGTCGGTCTCGCCGACGTCGAATCGAGGGTCTGTAAATCTGCCATGGCGGCGCCTCAAACATCCCAGATGACGATATTCTACGGCGGCCGGGTTTTTGTGTTCAACAATTTTTCGGCGGACAGCGCCGGAGAAGTGATGCTGCTGGCCAGCCGGGAAAGCTCCAAATCGAACAACCCCCTTTACGGCCGACCCATCTTGGTCGGAACGCCGGCGGATTCATTAAGCTCGACTTCCCCTGCTTCTCCGCCGCCGCCGCCGCCGCCTCAGGCCGTTAACTCTTCCATTTCTGCAGCTCTGCCGATTGCTCGTAAGGCTTCGATTCAGCGTTTCTTGGAGAAGCGAAAAGACAGGCTGACCGCGAGAGCGCCGTACCAGAGCTGCCCGCTGACCGGCGGCCCGAGGAAGGGCGGCGCCGGCGAGAATGCGTGGCTGGGTTTGGCTGTGCAACGGCAGCAT

Coding sequence (CDS)

ATGTCGAGCTCCTCCGGATTCTCTCAGGCGTCGTCGGCGCCCAACTCGCCGGAGAAGCGCGGCTTTGCTCCCGCCGCAGGTGGTCTGGTTTCTGGGAGAGATCTGAATCGGGGTTTCTCGTCCAATCTCCGGCGAGGAAACGGGTCGGCGCCGGAAATTTTCTACCGGCCGGAGAAATTGGGGAATCTCAAATCCTTGGATTTGTTCCCTCAACATGCCGGCGTCGGTCTCGCCGACGTCGAATCGAGGGTCTGTAAATCTGCCATGGCGGCGCCTCAAACATCCCAGATGACGATATTCTACGGCGGCCGGGTTTTTGTGTTCAACAATTTTTCGGCGGACAGCGCCGGAGAAGTGATGCTGCTGGCCAGCCGGGAAAGCTCCAAATCGAACAACCCCCTTTACGGCCGACCCATCTTGGTCGGAACGCCGGCGGATTCATTAAGCTCGACTTCCCCTGCTTCTCCGCCGCCGCCGCCGCCGCCTCAGGCCGTTAACTCTTCCATTTCTGCAGCTCTGCCGATTGCTCGTAAGGCTTCGATTCAGCGTTTCTTGGAGAAGCGAAAAGACAGGCTGACCGCGAGAGCGCCGTACCAGAGCTGCCCGCTGACCGGCGGCCCGAGGAAGGGCGGCGCCGGCGAGAATGCGTGGCTGGGTTTGGCTGTGCAACGGCAGCAT

Protein sequence

MSSSSGFSQASSAPNSPEKRGFAPAAGGLVSGRDLNRGFSSNLRRGNGSAPEIFYRPEKLGNLKSLDLFPQHAGVGLADVESRVCKSAMAAPQTSQMTIFYGGRVFVFNNFSADSAGEVMLLASRESSKSNNPLYGRPILVGTPADSLSSTSPASPPPPPPPQAVNSSISAALPIARKASIQRFLEKRKDRLTARAPYQSCPLTGGPRKGGAGENAWLGLAVQRQH

Homology

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BLAST of MS023153 vs. NCBI nr
Match: KAG7023714.1 (Protein TIFY 10a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 270.8 bits (691), Expect = 1.1e-68
Identity = 161/234 (68.80%), Postives = 181/234 (77.35%), Query Frame = 0


Query: 1   MSSSSGFSQASSAPNSPEKRGFAPAAGGLVSGRDLNRGFSSNLRRGNGSAPEIFYRPEKL 60
           MS+SSGFSQ SS   SPE  GF PA   LVSG +LN GFS+NLRR NGSAPE+F+RPEK+
Sbjct: 1   MSTSSGFSQVSSL-KSPENLGFLPADAMLVSGEELNLGFSANLRRRNGSAPELFHRPEKM 60

Query: 61  GNLKSLDLFPQHAGVGLA-DVESRVCKSAMAAPQTSQMTIFYGGRVFVFNNFSADSAGEV 120
            NLKSLDLFPQ AG G++ DV S V KSA AAPQ SQMTIFY G+VFVFNNF A+  GEV
Sbjct: 61  ANLKSLDLFPQEAGFGISNDVVSSVYKSATAAPQASQMTIFYAGQVFVFNNFPAERVGEV 120

Query: 121 MLLASRESSKSNNP----LYGRPILVGTPADSLSSTSPAS-----PPPPPPPQAV-NSSI 180
           M +A RESSK N P      G+PILVGTPADSLSS+SP S     PPPPP PQ+V  +SI
Sbjct: 121 MFIAGRESSKLNIPATAVASGQPILVGTPADSLSSSSPVSTRNPTPPPPPQPQSVTGASI 180

Query: 181 SAALPIARKASIQRFLEKRKDRLTARAPYQSCPLTGGPRKGGAGENAWLGLAVQ 224
           SAALP+ARKASIQRFLEKR+DRLT RAPYQ+CP    P K  AG+N+WLGLAVQ
Sbjct: 181 SAALPMARKASIQRFLEKRRDRLTLRAPYQNCP---APSK-LAGDNSWLGLAVQ 229

[Close]

BLAST of MS023153 vs. NCBI nr
Match: XP_022960734.1 (protein TIFY 10a-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 265.4 bits (677), Expect = 4.5e-67
Identity = 157/231 (67.97%), Postives = 177/231 (76.62%), Query Frame = 0


Query: 1   MSSSSGFSQASSAPNSPEKRGFAPAAGGLVSGRDLNRGFSSNLRRGNGSAPEIFYRPEKL 60
           MS+SSGFSQ SS   SPE  GF PA   LVSG +LN GFS+NLRR NGSAPE+F+RPEK+
Sbjct: 1   MSTSSGFSQVSSL-KSPENLGFLPADAMLVSGEELNLGFSANLRRRNGSAPELFHRPEKM 60

Query: 61  GNLKSLDLFPQHAGVGLA-DVESRVCKSAMAAPQTSQMTIFYGGRVFVFNNFSADSAGEV 120
            NLKSLDLFPQ AG G++ DV S V KSA AAPQ SQMTIFY G+VFVFNNF A+  GEV
Sbjct: 61  ANLKSLDLFPQEAGFGISNDVVSSVYKSATAAPQASQMTIFYAGQVFVFNNFPAERVGEV 120

Query: 121 MLLASRESSKSNNP----LYGRPILVGTPADSLSSTSPAS---PPPPPPPQAVNSSISAA 180
           M +A RESSK N P      G+PILVGTPADSLSS+SP S   P PPPPPQ    S++ A
Sbjct: 121 MFIAGRESSKLNIPATAVASGQPILVGTPADSLSSSSPVSTRNPTPPPPPQP--QSVTGA 180

Query: 181 LPIARKASIQRFLEKRKDRLTARAPYQSCPLTGGPRKGGAGENAWLGLAVQ 224
           LP+ARKASIQRFLEKR+DRLT RAPYQ+CP    P K  AG+N+WLGLAVQ
Sbjct: 181 LPMARKASIQRFLEKRRDRLTLRAPYQNCP---APSK-LAGDNSWLGLAVQ 224

[Close]

BLAST of MS023153 vs. NCBI nr
Match: KAG6590048.1 (Protein TIFY 10a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 264.6 bits (675), Expect = 7.7e-67
Identity = 156/231 (67.53%), Postives = 177/231 (76.62%), Query Frame = 0


Query: 1   MSSSSGFSQASSAPNSPEKRGFAPAAGGLVSGRDLNRGFSSNLRRGNGSAPEIFYRPEKL 60
           MS+SSGFSQ SS   SPE  GF PA   LVSG +LN GFS+NLRR NGSAPE+F+RPEK+
Sbjct: 1   MSTSSGFSQVSSL-KSPENLGFLPAGAMLVSGEELNLGFSANLRRRNGSAPELFHRPEKM 60

Query: 61  GNLKSLDLFPQHAGVGLA-DVESRVCKSAMAAPQTSQMTIFYGGRVFVFNNFSADSAGEV 120
            NLKSLDLFPQ AG G++ DV S V KSA AAPQ+SQMTIFY G+VFVFNNF A+  GEV
Sbjct: 61  ANLKSLDLFPQEAGFGISNDVVSSVNKSATAAPQSSQMTIFYAGQVFVFNNFPAERVGEV 120

Query: 121 MLLASRESSKSNNP----LYGRPILVGTPADSLSSTSPAS---PPPPPPPQAVNSSISAA 180
           M +A RESSK N P      G+PI VGTPADSLSS+SP S   P PPPPPQ    S++ A
Sbjct: 121 MFIAGRESSKLNIPAAAVASGQPIFVGTPADSLSSSSPVSTRNPTPPPPPQP--QSVAGA 180

Query: 181 LPIARKASIQRFLEKRKDRLTARAPYQSCPLTGGPRKGGAGENAWLGLAVQ 224
           LP+ARKASIQRFLEKR+DRLT RAPYQ+CP    P K  AG+N+WLGLAVQ
Sbjct: 181 LPMARKASIQRFLEKRRDRLTLRAPYQNCP---APSK-LAGDNSWLGLAVQ 224

[Close]

BLAST of MS023153 vs. NCBI nr
Match: XP_023529884.1 (protein TIFY 10A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.6 bits (675), Expect = 7.7e-67
Identity = 158/231 (68.40%), Postives = 174/231 (75.32%), Query Frame = 0


Query: 1   MSSSSGFSQAS---SAPNSPEKRGFAPAAGGLVSGRDLNRGFSSNLRRGNGSAPEIFYRP 60
           MSSSSGFS+ S   SA NSPEKRGF P  G LVSG DLN GFS+  RR NGSAPE FY+P
Sbjct: 1   MSSSSGFSRVSSQRSASNSPEKRGFVPVGGMLVSGGDLNTGFSACRRRKNGSAPEFFYQP 60

Query: 61  EKLGNLKSLDLFPQHAGVGLA-DVESRVCKSAMAAPQTSQMTIFYGGRVFVFNNFSADSA 120
           EK+ N KSLDLFPQ AG G++ DV+S VCKSAMA PQTSQMTIFY GRVFVFNN   D  
Sbjct: 61  EKMVNRKSLDLFPQQAGFGVSNDVDSSVCKSAMAMPQTSQMTIFYAGRVFVFNNVPVDRV 120

Query: 121 GEVMLLASRESSKSNNPLYGRPILVGTPADSLSSTSPAS----PPPPPPPQAVNSSISAA 180
           GEVM LA RESSK+     G+ +L+ TPADSLSSTSPAS     PPPPPPQ     ++ A
Sbjct: 121 GEVMFLAGRESSKN---AAGQRVLIETPADSLSSTSPASSRNQTPPPPPPQP--QPVTGA 180

Query: 181 LPIARKASIQRFLEKRKDRLTARAPYQSCPLTGGPRKGGAGENAWLGLAVQ 224
           LP+ARKASIQRFLEKRKDRLTARAPYQ  P TG      AG+N+WLGLAVQ
Sbjct: 181 LPMARKASIQRFLEKRKDRLTARAPYQGIP-TGSK---NAGDNSWLGLAVQ 222

[Close]

BLAST of MS023153 vs. NCBI nr
Match: XP_023516389.1 (protein TIFY 10a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.2 bits (674), Expect = 1.0e-66
Identity = 158/231 (68.40%), Postives = 176/231 (76.19%), Query Frame = 0


Query: 1   MSSSSGFSQASSAPNSPEKRGFAPAAGGLVSGRDLNRGFSSNLRRGNGSAPEIFYRPEKL 60
           MS+SSGFSQ SS   SPE  GF PA   LVSG DLN GFS+NLRR NGSAPE+F+RPEK+
Sbjct: 1   MSTSSGFSQVSSL-KSPENLGFLPAGAMLVSGEDLNLGFSANLRRRNGSAPELFHRPEKM 60

Query: 61  GNLKSLDLFPQHAGVGLA-DVESRVCKSAMAAPQTSQMTIFYGGRVFVFNNFSADSAGEV 120
            NLKSLDLFPQ AG G++ DV S V KSA AAPQ SQMTIFY G+VFVFNNF A+  GEV
Sbjct: 61  ANLKSLDLFPQEAGFGISNDVVSSVYKSATAAPQASQMTIFYAGQVFVFNNFPAERVGEV 120

Query: 121 MLLASRESSKSNNP----LYGRPILVGTPADSLSSTSPAS---PPPPPPPQAVNSSISAA 180
           M LA RESSK N P      G+PILVGTPADSLSS+SP S   P PPPPPQ    S++ A
Sbjct: 121 MFLAGRESSKLNIPAATVASGQPILVGTPADSLSSSSPVSTRTPTPPPPPQP--QSVTGA 180

Query: 181 LPIARKASIQRFLEKRKDRLTARAPYQSCPLTGGPRKGGAGENAWLGLAVQ 224
           LP+ARKASIQRFLEKR+DRLT RAPYQ+ P    P K  AG+N+WLGLAVQ
Sbjct: 181 LPMARKASIQRFLEKRRDRLTLRAPYQNYP---APSK-LAGDNSWLGLAVQ 224

[Close]

BLAST of MS023153 vs. ExPASy Swiss-Prot
Match: A2YNP2 (Protein TIFY 10b OS=Oryza sativa subsp. indica OX=39946 GN=TIFY10B PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.1e-18
Identity = 72/195 (36.92%), Postives = 92/195 (47.18%), Query Frame = 0


Query: 45  RGNGSAPEI------FYRPEKLGNLKSLDLFPQHAGVGLAD--VESRVCKSAMAAPQTSQ 104
           RG G AP            E     ++++LFPQ AG G  D         +    P+  Q
Sbjct: 44  RGEGEAPRAAPGTMSLLPGEAERKKETMELFPQSAGFGQQDAITADSAADAREQEPEKRQ 103

Query: 105 MTIFYGGRVFVFNNFSADSAGEVMLLASRESSKSNNPLYG-----------RPILVGTPA 164
           +TIFYGG+V VFN+F AD A  +M LAS+ S+ +                  P+ V  P 
Sbjct: 104 LTIFYGGKVLVFNDFPADKAKGLMQLASKGSTVAPQNAVAPAPAAVTDNTKAPMAVPAPV 163

Query: 165 DSLSSTSPASPPPPPPPQAVNSSISAALPIARKASIQRFLEKRKDRLTARAPYQSCPLTG 221
            SL    P +      P   N+S    +PIARKAS+ RFLEKRKDRL A+ PYQ+ P   
Sbjct: 164 SSL----PTAQADAQKPARANAS---DMPIARKASLHRFLEKRKDRLNAKTPYQASPSDA 223

[Close]

BLAST of MS023153 vs. ExPASy Swiss-Prot
Match: Q8H395 (Protein TIFY 10b OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY10B PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.4e-18
Identity = 74/193 (38.34%), Postives = 95/193 (49.22%), Query Frame = 0


Query: 45  RGNGSAPEI------FYRPEKLGNLKSLDLFPQHAGVGLAD--VESRVCKSAMAAPQTSQ 104
           RG G AP            E     ++++LFPQ AG G  D         +    P+  Q
Sbjct: 44  RGEGEAPRAAPATMSLLPGEAERKKETMELFPQSAGFGQQDAITADSAADAREQEPEKRQ 103

Query: 105 MTIFYGGRVFVFNNFSADSAGEVMLLASRESSKSNNPLYGRPILVGTPADSLSST-SPAS 164
           +TIFYGG+V VFN+F AD A  +M LAS+ S     P+  +      PA    +T +P +
Sbjct: 104 LTIFYGGKVLVFNDFPADKAKGLMQLASKGS-----PVAPQNAAAPAPAAVTDNTKAPMA 163

Query: 165 PPPP----PPPQAVNSSISAA----LPIARKASIQRFLEKRKDRLTARAPYQSCPLTGGP 221
            P P    P  QA     + A    +PIARKAS+ RFLEKRKDRL A+ PYQ+ P    P
Sbjct: 164 VPAPVSSLPTAQADAQKPARANASDMPIARKASLHRFLEKRKDRLNAKTPYQASPSDATP 223

[Close]

BLAST of MS023153 vs. ExPASy Swiss-Prot
Match: Q84R94 (Protein TIFY 10a OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY10A PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.0e-18
Identity = 64/166 (38.55%), Postives = 92/166 (55.42%), Query Frame = 0


Query: 64  KSLDLFPQHAGVGLADVESRVCKSAMAAPQTSQMTIFYGGRVFVFNNFSADSAGEVMLLA 123
           ++++LFPQ++G G      +    A    +  Q+TIFYGG+V VF++F A+ A ++M +A
Sbjct: 50  ETMELFPQNSGFGSEAAAVKETPDA-REQEKRQLTIFYGGKVLVFDDFPAEKAKDLMQMA 109

Query: 124 SRESSKSNNPLYGRPILVGTPADSLSSTSPASPPPPPPPQAVNS-----SISAALPIARK 183
           S+ SS + N +        T AD+   ++  +P    P    N+       +A LP ARK
Sbjct: 110 SKSSSTAQNCVLLPSSATATVADNTKVSAVPAPASALPVAQANAPKPVRPNAADLPQARK 169

Query: 184 ASIQRFLEKRKDRLTARAPYQSCPLTGGPRKGGAGEN-AWLGLAVQ 224
           AS+ RFLEKRKDRL A+APYQ  P    P K    E+  WLGL  Q
Sbjct: 170 ASLHRFLEKRKDRLQAKAPYQGSPSDASPVKKELQESQPWLGLGPQ 214

[Close]

BLAST of MS023153 vs. ExPASy Swiss-Prot
Match: Q9S7M2 (Protein TIFY 10B OS=Arabidopsis thaliana OX=3702 GN=TIFY10B PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.9e-15
Identity = 54/124 (43.55%), Postives = 76/124 (61.29%), Query Frame = 0


Query: 86  KSAMAAPQTSQMTIFYGGRVFVFNNFSADSAGEVMLLASRESSKS----------NNPLY 145
           KS     Q++ +TIFYGGRV VF++FSA+ A EV+ LA++ S+KS          N+  Y
Sbjct: 109 KSVKPESQSAPLTIFYGGRVMVFDDFSAEKAKEVIDLANKGSAKSFTCFTAEVNNNHSAY 168

Query: 146 GRPILVGTPADSLSSTSPASPPPPPPPQAVNSSISAALPIARKASIQRFLEKRKDRLTAR 200
            +  +  +P    S    A+  P  P  A   S++  LPIAR+AS+ RFLEKRKDR+T++
Sbjct: 169 SQKEIASSPNPVCSPAKTAAQEPIQPNPA---SLACELPIARRASLHRFLEKRKDRITSK 228

[Close]

BLAST of MS023153 vs. ExPASy Swiss-Prot
Match: Q9LMA8 (Protein TIFY 10A OS=Arabidopsis thaliana OX=3702 GN=TIFY10A PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.1e-15
Identity = 58/150 (38.67%), Postives = 83/150 (55.33%), Query Frame = 0


Query: 82  SRVCKSAMAAPQTSQMTIFYGGRVFVFNNFSADSAGEVMLLASRESSKSNNPLYGRPILV 141
           ++  +S     QT+ +TIFY G+V VFN+FSA+ A EV+ LAS+ ++ S         L 
Sbjct: 112 TQTTRSVKPESQTAPLTIFYAGQVIVFNDFSAEKAKEVINLASKGTANS---------LA 171

Query: 142 GTPADSLSSTSPASPPPPPP-----PQAVNSSIS--AALPIARKASIQRFLEKRKDRLTA 201
               D  S+ +  +   P P      + + SS +    LPIAR+AS+ RFLEKRKDR+T+
Sbjct: 172 KNQTDIRSNIATIANQVPHPRKTTTQEPIQSSPTPLTELPIARRASLHRFLEKRKDRVTS 231

Query: 202 RAPYQSC-PLTGGPRKGGAGENAWLGLAVQ 224
           +APYQ C P          G  +WLGLA +
Sbjct: 232 KAPYQLCDPAKASSNPQTTGNMSWLGLAAE 252

[Close]

BLAST of MS023153 vs. ExPASy TrEMBL
Match: A0A6J1HBZ2 (protein TIFY 10a-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461447 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 2.2e-67
Identity = 157/231 (67.97%), Postives = 177/231 (76.62%), Query Frame = 0


Query: 1   MSSSSGFSQASSAPNSPEKRGFAPAAGGLVSGRDLNRGFSSNLRRGNGSAPEIFYRPEKL 60
           MS+SSGFSQ SS   SPE  GF PA   LVSG +LN GFS+NLRR NGSAPE+F+RPEK+
Sbjct: 1   MSTSSGFSQVSSL-KSPENLGFLPADAMLVSGEELNLGFSANLRRRNGSAPELFHRPEKM 60

Query: 61  GNLKSLDLFPQHAGVGLA-DVESRVCKSAMAAPQTSQMTIFYGGRVFVFNNFSADSAGEV 120
            NLKSLDLFPQ AG G++ DV S V KSA AAPQ SQMTIFY G+VFVFNNF A+  GEV
Sbjct: 61  ANLKSLDLFPQEAGFGISNDVVSSVYKSATAAPQASQMTIFYAGQVFVFNNFPAERVGEV 120

Query: 121 MLLASRESSKSNNP----LYGRPILVGTPADSLSSTSPAS---PPPPPPPQAVNSSISAA 180
           M +A RESSK N P      G+PILVGTPADSLSS+SP S   P PPPPPQ    S++ A
Sbjct: 121 MFIAGRESSKLNIPATAVASGQPILVGTPADSLSSSSPVSTRNPTPPPPPQP--QSVTGA 180

Query: 181 LPIARKASIQRFLEKRKDRLTARAPYQSCPLTGGPRKGGAGENAWLGLAVQ 224
           LP+ARKASIQRFLEKR+DRLT RAPYQ+CP    P K  AG+N+WLGLAVQ
Sbjct: 181 LPMARKASIQRFLEKRRDRLTLRAPYQNCP---APSK-LAGDNSWLGLAVQ 224

[Close]

BLAST of MS023153 vs. ExPASy TrEMBL
Match: A0A6J1HYW1 (protein TIFY 10b-like OS=Cucurbita maxima OX=3661 GN=LOC111467486 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 3.2e-66
Identity = 154/231 (66.67%), Postives = 169/231 (73.16%), Query Frame = 0


Query: 1   MSSSSGFSQAS---SAPNSPEKRGFAPAAGGLVSGRDLNRGFSSNLRRGNGSAPEIFYRP 60
           MSSSSGFS+ S   SA NSPE RGF P  G LVSG DLN GFS+   R NGSAPE FY+P
Sbjct: 1   MSSSSGFSRVSSQRSASNSPEMRGFVPVGGMLVSGGDLNTGFSAYRWRKNGSAPEFFYQP 60

Query: 61  EKLGNLKSLDLFPQHAGVGLA-DVESRVCKSAMAAPQTSQMTIFYGGRVFVFNNFSADSA 120
            K+ N KSLDLFPQ AG G++ DV+S VCKSAMA PQTSQMTIFY GRVFVFNN   D  
Sbjct: 61  GKMVNRKSLDLFPQQAGFGVSNDVDSSVCKSAMATPQTSQMTIFYAGRVFVFNNVPVDRV 120

Query: 121 GEVMLLASRESSKSNNPLYGRPILVGTPADSLSSTSPAS----PPPPPPPQAVNSSISAA 180
           GEVM LA RESSK+     G+ +LV TPADSLSSTSP S     PPPPPPQ     ++ A
Sbjct: 121 GEVMFLAGRESSKN---AAGQRVLVETPADSLSSTSPTSSRIQTPPPPPPQP--QPVTGA 180

Query: 181 LPIARKASIQRFLEKRKDRLTARAPYQSCPLTGGPRKGGAGENAWLGLAVQ 224
           LP+ARKASIQRFLEKRKDRLTARAPYQ  P        GAG+N+WLGLAVQ
Sbjct: 181 LPMARKASIQRFLEKRKDRLTARAPYQGIPTASKNAGAGAGDNSWLGLAVQ 226

[Close]

BLAST of MS023153 vs. ExPASy TrEMBL
Match: A0A6J1ECT0 (protein TIFY 10A-like OS=Cucurbita moschata OX=3662 GN=LOC111433000 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 4.1e-66
Identity = 155/231 (67.10%), Postives = 171/231 (74.03%), Query Frame = 0


Query: 1   MSSSSGFSQAS---SAPNSPEKRGFAPAAGGLVSGRDLNRGFSSNLRRGNGSAPEIFYRP 60
           MSSSSGFS+ S   SA NSPEKRGF P  G LVSG DLN GFS+  RR NGSAPE F++P
Sbjct: 1   MSSSSGFSRVSSQRSASNSPEKRGFVPVGGMLVSGGDLNTGFSACRRRKNGSAPEFFFQP 60

Query: 61  EKLGNLKSLDLFPQHAGVGLA-DVESRVCKSAMAAPQTSQMTIFYGGRVFVFNNFSADSA 120
           EK+ N KSLDLFPQ AG G++ DV+S VCKSAMAAPQTSQMTIFY GRVFVFNN   D  
Sbjct: 61  EKMVNRKSLDLFPQQAGFGVSNDVDSSVCKSAMAAPQTSQMTIFYAGRVFVFNNVPVDRV 120

Query: 121 GEVMLLASRESSKSNNPLYGRPILVGTPADSLSSTSPAS----PPPPPPPQAVNSSISAA 180
           GEVM LA RESSK+      + +LV TP DSLSSTSPAS     PPPPPPQ     ++ A
Sbjct: 121 GEVMFLAGRESSKN---AANQRVLVETPTDSLSSTSPASSRNQTPPPPPPQP--QPVTGA 180

Query: 181 LPIARKASIQRFLEKRKDRLTARAPYQSCPLTGGPRKGGAGENAWLGLAVQ 224
           LP+ARKASIQRFLEKRKDRLTARAPYQ  P         AG+N+WLGLAVQ
Sbjct: 181 LPMARKASIQRFLEKRKDRLTARAPYQGIPTA----SKNAGDNSWLGLAVQ 222

[Close]

BLAST of MS023153 vs. ExPASy TrEMBL
Match: A0A6J1JHB0 (protein TIFY 10a-like OS=Cucurbita maxima OX=3661 GN=LOC111485713 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.5e-65
Identity = 155/231 (67.10%), Postives = 172/231 (74.46%), Query Frame = 0


Query: 1   MSSSSGFSQASSAPNSPEKRGFAPAAGGLVSGRDLNRGFSSNLRRGNGSAPEIFYRPEKL 60
           M +SSGFSQ SS   SPE  GF PA   LVSG DLN GFS+N RR NG APE+FYRPEK+
Sbjct: 1   MLTSSGFSQVSSL-KSPENLGFLPADAMLVSGEDLNLGFSANHRRRNGPAPELFYRPEKM 60

Query: 61  GNLKSLDLFPQHAGVGLA-DVESRVCKSAMAAPQTSQMTIFYGGRVFVFNNFSADSAGEV 120
            NLKSLDLFPQ AG G++ DV S V KSA AAPQ SQMTIFY G+VFVFNNF A+  GEV
Sbjct: 61  ANLKSLDLFPQEAGFGISNDVVSSVYKSATAAPQASQMTIFYAGQVFVFNNFPAERVGEV 120

Query: 121 MLLASRESSKSNNP----LYGRPILVGTPADSLSSTSPAS---PPPPPPPQAVNSSISAA 180
           M LA  +SSK N P      G+PI VGTPADSLSS+SP S   P PPPPPQ    S++ A
Sbjct: 121 MFLAGLQSSKMNIPAAAVASGQPISVGTPADSLSSSSPVSTRKPTPPPPPQP--QSVTGA 180

Query: 181 LPIARKASIQRFLEKRKDRLTARAPYQSCPLTGGPRKGGAGENAWLGLAVQ 224
           LP+ARKASIQRFLEKR+DRLT RAPYQSCP    P K  AG+N+WLGLAVQ
Sbjct: 181 LPMARKASIQRFLEKRRDRLTLRAPYQSCP---APTK-LAGDNSWLGLAVQ 224

[Close]

BLAST of MS023153 vs. ExPASy TrEMBL
Match: A0A0A0LZM2 (Tify domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G597690 PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 7.6e-60
Identity = 150/239 (62.76%), Postives = 165/239 (69.04%), Query Frame = 0


Query: 1   MSSSSGFSQAS---SAPNSPEKRGFAPAAGGLVSGRDLNRGFSSNLRRGNGSAPEIFYRP 60
           MS+SSGFSQ S   S  NSP+   F P    L+S  DLN GFS NLRR NGS PE F  P
Sbjct: 1   MSTSSGFSQISSHRSISNSPDNLAFLPLHPMLLSPTDLNLGFSPNLRRTNGSVPEFFNSP 60

Query: 61  EKLGNLKSLDLFPQHAGVGLA-DVESRVCKSAMAAPQTSQMTIFYGGRVFVFNNFSADSA 120
           EK+ + KSLDLFPQ AG G + DV+SRV KS  AAPQTSQMTIFY G+VFVFNN  AD  
Sbjct: 61  EKMADRKSLDLFPQEAGFGNSNDVDSRVYKSVTAAPQTSQMTIFYAGQVFVFNNIPADRV 120

Query: 121 GEVMLLASRESSKSNNPLYGR---PILVGTPADSLSSTSP------ASPPPPPPPQAVNS 180
           G+VM LAS+ESS+ N P       PILVGTPADSLSSTSP       SPPPPPPP     
Sbjct: 121 GDVMFLASQESSRLNIPTVAARQPPILVGTPADSLSSTSPVPTRNQTSPPPPPPP----- 180

Query: 181 SISAALPIARKASIQRFLEKRKDRLTARAPYQ-SCPLTGGPRKGGAGENAWLGLAVQRQ 226
           S+  ALP+ARKASIQRFLEKRKDRLT R PYQ S P+T        GEN+WLGLAVQ Q
Sbjct: 181 SVPGALPMARKASIQRFLEKRKDRLTPRTPYQSSSPVTSKK----TGENSWLGLAVQSQ 230

[Close]

BLAST of MS023153 vs. TAIR 10
Match: AT1G74950.1 (TIFY domain/Divergent CCT motif family protein )

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-16
Identity = 54/124 (43.55%), Postives = 76/124 (61.29%), Query Frame = 0


Query: 86  KSAMAAPQTSQMTIFYGGRVFVFNNFSADSAGEVMLLASRESSKS----------NNPLY 145
           KS     Q++ +TIFYGGRV VF++FSA+ A EV+ LA++ S+KS          N+  Y
Sbjct: 109 KSVKPESQSAPLTIFYGGRVMVFDDFSAEKAKEVIDLANKGSAKSFTCFTAEVNNNHSAY 168

Query: 146 GRPILVGTPADSLSSTSPASPPPPPPPQAVNSSISAALPIARKASIQRFLEKRKDRLTAR 200
            +  +  +P    S    A+  P  P  A   S++  LPIAR+AS+ RFLEKRKDR+T++
Sbjct: 169 SQKEIASSPNPVCSPAKTAAQEPIQPNPA---SLACELPIARRASLHRFLEKRKDRITSK 228

[Close]

BLAST of MS023153 vs. TAIR 10
Match: AT1G19180.1 (jasmonate-zim-domain protein 1 )

HSP 1 Score: 82.4 bits (202), Expect = 5.1e-16
Identity = 58/150 (38.67%), Postives = 83/150 (55.33%), Query Frame = 0


Query: 82  SRVCKSAMAAPQTSQMTIFYGGRVFVFNNFSADSAGEVMLLASRESSKSNNPLYGRPILV 141
           ++  +S     QT+ +TIFY G+V VFN+FSA+ A EV+ LAS+ ++ S         L 
Sbjct: 112 TQTTRSVKPESQTAPLTIFYAGQVIVFNDFSAEKAKEVINLASKGTANS---------LA 171

Query: 142 GTPADSLSSTSPASPPPPPP-----PQAVNSSIS--AALPIARKASIQRFLEKRKDRLTA 201
               D  S+ +  +   P P      + + SS +    LPIAR+AS+ RFLEKRKDR+T+
Sbjct: 172 KNQTDIRSNIATIANQVPHPRKTTTQEPIQSSPTPLTELPIARRASLHRFLEKRKDRVTS 231

Query: 202 RAPYQSC-PLTGGPRKGGAGENAWLGLAVQ 224
           +APYQ C P          G  +WLGLA +
Sbjct: 232 KAPYQLCDPAKASSNPQTTGNMSWLGLAAE 252

[Close]

BLAST of MS023153 vs. TAIR 10
Match: AT1G19180.2 (jasmonate-zim-domain protein 1 )

HSP 1 Score: 82.4 bits (202), Expect = 5.1e-16
Identity = 58/150 (38.67%), Postives = 83/150 (55.33%), Query Frame = 0


Query: 82  SRVCKSAMAAPQTSQMTIFYGGRVFVFNNFSADSAGEVMLLASRESSKSNNPLYGRPILV 141
           ++  +S     QT+ +TIFY G+V VFN+FSA+ A EV+ LAS+ ++ S         L 
Sbjct: 46  TQTTRSVKPESQTAPLTIFYAGQVIVFNDFSAEKAKEVINLASKGTANS---------LA 105

Query: 142 GTPADSLSSTSPASPPPPPP-----PQAVNSSIS--AALPIARKASIQRFLEKRKDRLTA 201
               D  S+ +  +   P P      + + SS +    LPIAR+AS+ RFLEKRKDR+T+
Sbjct: 106 KNQTDIRSNIATIANQVPHPRKTTTQEPIQSSPTPLTELPIARRASLHRFLEKRKDRVTS 165

Query: 202 RAPYQSC-PLTGGPRKGGAGENAWLGLAVQ 224
           +APYQ C P          G  +WLGLA +
Sbjct: 166 KAPYQLCDPAKASSNPQTTGNMSWLGLAAE 186

[Close]

BLAST of MS023153 vs. TAIR 10
Match: AT5G20900.1 (jasmonate-zim-domain protein 12 )

HSP 1 Score: 62.0 bits (149), Expect = 7.1e-10
Identity = 48/126 (38.10%), Postives = 75/126 (59.52%), Query Frame = 0


Query: 79  DVESRVCKSAMAAPQTSQMTIFYGGRVFVFNNFSADSAGEVMLLASR----ESSKSNNPL 138
           +V S   ++A      +Q+TIF+GG V VF+   ++   E++ +A++    ++S S +P+
Sbjct: 40  EVRSTEIQTAEPTVPPNQLTIFFGGSVTVFDGLPSEKVQEILRIAAKAMETKNSTSISPV 99

Query: 139 YGRPILVGTPADSLSS--TSPASPPPPPPPQAVNSSISAALPIARKASIQRFLEKRKDRL 198
              P L   P+ S +S   SPA+ P P  P +   S +A LPIAR+ S+QRFLEKR+DRL
Sbjct: 100 -SSPALNRAPSFSSTSNVASPAAQPFPIQPISFCRS-TADLPIARRHSLQRFLEKRRDRL 159

[Close]

BLAST of MS023153 vs. TAIR 10
Match: AT1G70700.1 (TIFY domain/Divergent CCT motif family protein )

HSP 1 Score: 56.6 bits (135), Expect = 3.0e-08
Identity = 58/186 (31.18%), Postives = 86/186 (46.24%), Query Frame = 0


Query: 37  RGFSSNLRRGNGSAPEIFYRPEKLGNLKSLDLFPQHAGVGLADVESRVCKSAMAAPQTSQ 96
           + F    + G+ SA  +F R +  G  ++         V L    S V + A ++  + Q
Sbjct: 61  KAFPGAYQWGSVSAANVFRRCQFGGAFQNATPLLLGGSVPLPTHPSLVPRVA-SSGSSPQ 120

Query: 97  MTIFYGGRVFVFNNFSADSAGEVMLLASR---------ESSKSNNPLYGRPI--LVGTPA 156
           +TIFYGG + VFN+ S D A  +ML A           +  +    +YG+ I     T +
Sbjct: 121 LTIFYGGTISVFNDISPDKAQAIMLCAGNGLKGETGDSKPVREAERMYGKQIHNTAATSS 180

Query: 157 DSLSSTSPASPPPPPPPQAVNS-----SISAA-------LPIARKASIQRFLEKRKDRLT 200
            S + T   S     P  A N+     S +AA       +P ARKAS+ RFLEKRK+RL 
Sbjct: 181 SSATHTDNFSRCRDTPVAATNAMSMIESFNAAPRNMIPSVPQARKASLARFLEKRKERLM 240

The following BLAST results are available for this feature:

BLAST of MS023153 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023714.1	1.1e-68	68.80	Protein TIFY 10a [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022960734.1	4.5e-67	67.97	protein TIFY 10a-like isoform X1 [Cucurbita moschata]	[more]
KAG6590048.1	7.7e-67	67.53	Protein TIFY 10a, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023529884.1	7.7e-67	68.40	protein TIFY 10A-like [Cucurbita pepo subsp. pepo]	[more]
XP_023516389.1	1.0e-66	68.40	protein TIFY 10a-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS023153 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2YNP2	1.1e-18	36.92	Protein TIFY 10b OS=Oryza sativa subsp. indica OX=39946 GN=TIFY10B PE=3 SV=1	[more]
Q8H395	1.4e-18	38.34	Protein TIFY 10b OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY10B PE=1 SV=1	[more]
Q84R94	4.0e-18	38.55	Protein TIFY 10a OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY10A PE=1 SV=1	[more]
Q9S7M2	1.9e-15	43.55	Protein TIFY 10B OS=Arabidopsis thaliana OX=3702 GN=TIFY10B PE=1 SV=1	[more]
Q9LMA8	7.1e-15	38.67	Protein TIFY 10A OS=Arabidopsis thaliana OX=3702 GN=TIFY10A PE=1 SV=1	[more]

BLAST of MS023153 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HBZ2	2.2e-67	67.97	protein TIFY 10a-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461447 P...	[more]
A0A6J1HYW1	3.2e-66	66.67	protein TIFY 10b-like OS=Cucurbita maxima OX=3661 GN=LOC111467486 PE=3 SV=1	[more]
A0A6J1ECT0	4.1e-66	67.10	protein TIFY 10A-like OS=Cucurbita moschata OX=3662 GN=LOC111433000 PE=3 SV=1	[more]
A0A6J1JHB0	3.5e-65	67.10	protein TIFY 10a-like OS=Cucurbita maxima OX=3661 GN=LOC111485713 PE=3 SV=1	[more]
A0A0A0LZM2	7.6e-60	62.76	Tify domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G597690 PE=3 S...	[more]

BLAST of MS023153 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74950.1	1.3e-16	43.55	TIFY domain/Divergent CCT motif family protein	[more]
AT1G19180.1	5.1e-16	38.67	jasmonate-zim-domain protein 1	[more]
AT1G19180.2	5.1e-16	38.67	jasmonate-zim-domain protein 1	[more]
AT5G20900.1	7.1e-10	38.10	jasmonate-zim-domain protein 12	[more]
AT1G70700.1	3.0e-08	31.18	TIFY domain/Divergent CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010399	Tify domain	SMART	SM00979	tify_2	coord: 90..125 e-value: 7.9E-12 score: 55.3
IPR010399	Tify domain	PFAM	PF06200	tify	coord: 92..124 e-value: 4.7E-15 score: 54.6
IPR010399	Tify domain	PROSITE	PS51320	TIFY	coord: 90..125 score: 15.844092
IPR018467	CO/COL/TOC1, conserved site	PFAM	PF09425	Jas_motif	coord: 174..199 e-value: 9.4E-14 score: 51.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR33077:SF52	PROTEIN TIFY 10A	coord: 56..221
IPR040390	TIFY/JAZ family	PANTHER	PTHR33077	PROTEIN TIFY 4A-RELATED-RELATED	coord: 56..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023153.1	MS023153.1	mRNA