MS023150 (gene) Bitter gourd (TR) v1

Overview


Name	MS023150
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	scaffold78: 477118 .. 478020 (-)
RNA-Seq Expression	MS023150
Synteny	MS023150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCACACCAGACATTTTCCCGGAAAGTTCACAAAACACCTCCGCCGAGACTATTCCCATTTGAACGCCGCCAAATCCGGCGTCTCCAGCGTCTGCGAACCGCTCCCTCCCGACAGACCTCTCTGGTTCCCCGGCAGCAGCCCCCCTGAGTGGCTCGACGGCAGGTCAAAAACTCCCTTAATTCTTCTTCTTCAGTCACAGCTTTAATTAACAGGATTCTAATTTCCACATTCTTTTTCTGTTACTCCGCAGCCTTCCCGGCGATTTTGGCTTCGACCCCCTTGGATTGGGTACTCATCTCTGGAAAATGCATAATTCATAATTTAATCTCTACAATTTTTAAAATTATGAATGGGCTCTGTTGGGGTGTTGTTGTTGTTGTTGTCAGGTTCTGATCCAGAGCTGCTGAAATGGTTCGCACAAGCGGAGCTGATGCACGCCAGATGGGCGATGCTGGCGGTGGCCGGAATCCTGCTACCGGAGTGGTTCGAGAGCCTGGGATTGATCGAGAATTTCTCGTGGTACGACGCCGGAACCCGGGAATATTTCGCGGACCCGACGACGTTGTTGGTGGCGCAATTGGGTCTAATGGGGTGGGCGGAGGGGCGGCGGTGGGCGGACATGGTCAACCCGGGGAGCGTGGACGTTGACCTGAAACTGCCACACAAGAAGAAGCCGGCGCCGGACGTGGGATACCCGGGCGGGTTCTGGTTCGACCCGATGATGTGGGGGAGAGGGTCACCGGAGCCGGTCATGGTGCTCCGGACCAAGGAGATTAAGAACGGCCGCCTCGCCATGCTGGCGTTCGTCGGACTGTGGTTTCAGGCCATTTATACCGGCCAAGGCCCGCTCGAGAATCTGGCGGCGCACCTCGCCGATCCCGGCCACTGCAACATCTTTTCG

mRNA sequence

TCCCACACCAGACATTTTCCCGGAAAGTTCACAAAACACCTCCGCCGAGACTATTCCCATTTGAACGCCGCCAAATCCGGCGTCTCCAGCGTCTGCGAACCGCTCCCTCCCGACAGACCTCTCTGGTTCCCCGGCAGCAGCCCCCCTGAGTGGCTCGACGGCAGCCTTCCCGGCGATTTTGGCTTCGACCCCCTTGGATTGGGTTCTGATCCAGAGCTGCTGAAATGGTTCGCACAAGCGGAGCTGATGCACGCCAGATGGGCGATGCTGGCGGTGGCCGGAATCCTGCTACCGGAGTGGTTCGAGAGCCTGGGATTGATCGAGAATTTCTCGTGGTACGACGCCGGAACCCGGGAATATTTCGCGGACCCGACGACGTTGTTGGTGGCGCAATTGGGTCTAATGGGGTGGGCGGAGGGGCGGCGGTGGGCGGACATGGTCAACCCGGGGAGCGTGGACGTTGACCTGAAACTGCCACACAAGAAGAAGCCGGCGCCGGACGTGGGATACCCGGGCGGGTTCTGGTTCGACCCGATGATGTGGGGGAGAGGGTCACCGGAGCCGGTCATGGTGCTCCGGACCAAGGAGATTAAGAACGGCCGCCTCGCCATGCTGGCGTTCGTCGGACTGTGGTTTCAGGCCATTTATACCGGCCAAGGCCCGCTCGAGAATCTGGCGGCGCACCTCGCCGATCCCGGCCACTGCAACATCTTTTCG

Coding sequence (CDS)

TCCCACACCAGACATTTTCCCGGAAAGTTCACAAAACACCTCCGCCGAGACTATTCCCATTTGAACGCCGCCAAATCCGGCGTCTCCAGCGTCTGCGAACCGCTCCCTCCCGACAGACCTCTCTGGTTCCCCGGCAGCAGCCCCCCTGAGTGGCTCGACGGCAGCCTTCCCGGCGATTTTGGCTTCGACCCCCTTGGATTGGGTTCTGATCCAGAGCTGCTGAAATGGTTCGCACAAGCGGAGCTGATGCACGCCAGATGGGCGATGCTGGCGGTGGCCGGAATCCTGCTACCGGAGTGGTTCGAGAGCCTGGGATTGATCGAGAATTTCTCGTGGTACGACGCCGGAACCCGGGAATATTTCGCGGACCCGACGACGTTGTTGGTGGCGCAATTGGGTCTAATGGGGTGGGCGGAGGGGCGGCGGTGGGCGGACATGGTCAACCCGGGGAGCGTGGACGTTGACCTGAAACTGCCACACAAGAAGAAGCCGGCGCCGGACGTGGGATACCCGGGCGGGTTCTGGTTCGACCCGATGATGTGGGGGAGAGGGTCACCGGAGCCGGTCATGGTGCTCCGGACCAAGGAGATTAAGAACGGCCGCCTCGCCATGCTGGCGTTCGTCGGACTGTGGTTTCAGGCCATTTATACCGGCCAAGGCCCGCTCGAGAATCTGGCGGCGCACCTCGCCGATCCCGGCCACTGCAACATCTTTTCG

Protein sequence

SHTRHFPGKFTKHLRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS

Homology

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BLAST of MS023150 vs. NCBI nr
Match: XP_022147671.1 (photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Momordica charantia])

HSP 1 Score: 523.5 bits (1347), Expect = 9.8e-145
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   SHTRHFPGKFTKHLRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDF 60
           SHTRHFPGKFTKHLRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDF
Sbjct: 20  SHTRHFPGKFTKHLRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDF 79

Query: 61  GFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREY 120
           GFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREY
Sbjct: 80  GFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREY 139

Query: 121 FADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMM 180
           FADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMM
Sbjct: 140 FADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMM 199

Query: 181 WGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS 240
           WGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS
Sbjct: 200 WGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS 258

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BLAST of MS023150 vs. NCBI nr
Match: XP_022929243.1 (photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 491.1 bits (1263), Expect = 5.4e-135
Identity = 227/244 (93.03%), Postives = 233/244 (95.49%), Query Frame = 0


Query: 1   SHTRH----FPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGS 60
           SH+ H    FPGKF K+ LRR  +HLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGS
Sbjct: 19  SHSHHRALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPPDRPLWFPGSTPPEWLDGS 78

Query: 61  LPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDA 120
           LPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLI+NFSWYDA
Sbjct: 79  LPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDA 138

Query: 121 GTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFW 180
           GTREYFADPTTLLVAQLGLMGW EGRRWADMVNPGSVDVDLKLPHKKKP PDVGYPGGFW
Sbjct: 139 GTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLKLPHKKKPTPDVGYPGGFW 198

Query: 181 FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHC 240
           FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAH+ADPGHC
Sbjct: 199 FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHC 258

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BLAST of MS023150 vs. NCBI nr
Match: XP_022929235.1 (photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 491.1 bits (1263), Expect = 5.4e-135
Identity = 227/244 (93.03%), Postives = 233/244 (95.49%), Query Frame = 0


Query: 1   SHTRH----FPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGS 60
           SH+ H    FPGKF K+ LRR  +HLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGS
Sbjct: 20  SHSHHRALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPPDRPLWFPGSTPPEWLDGS 79

Query: 61  LPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDA 120
           LPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLI+NFSWYDA
Sbjct: 80  LPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDA 139

Query: 121 GTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFW 180
           GTREYFADPTTLLVAQLGLMGW EGRRWADMVNPGSVDVDLKLPHKKKP PDVGYPGGFW
Sbjct: 140 GTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLKLPHKKKPTPDVGYPGGFW 199

Query: 181 FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHC 240
           FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAH+ADPGHC
Sbjct: 200 FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHC 259

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BLAST of MS023150 vs. NCBI nr
Match: KAG7021985.1 (Photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 491.1 bits (1263), Expect = 5.4e-135
Identity = 227/244 (93.03%), Postives = 233/244 (95.49%), Query Frame = 0


Query: 1   SHTRH----FPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGS 60
           SH+ H    FPGKF K+ LRR  +HLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGS
Sbjct: 20  SHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPPDRPLWFPGSTPPEWLDGS 79

Query: 61  LPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDA 120
           LPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLI+NFSWYDA
Sbjct: 80  LPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDA 139

Query: 121 GTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFW 180
           GTREYFADPTTLLVAQLGLMGW EGRRWADMVNPGSVDVDLKLPHKKKP PDVGYPGGFW
Sbjct: 140 GTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLKLPHKKKPTPDVGYPGGFW 199

Query: 181 FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHC 240
           FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAH+ADPGHC
Sbjct: 200 FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHC 259

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BLAST of MS023150 vs. NCBI nr
Match: KAG6588096.1 (Photosystem I chlorophyll a/b-binding protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 490.3 bits (1261), Expect = 9.2e-135
Identity = 227/244 (93.03%), Postives = 232/244 (95.08%), Query Frame = 0


Query: 1   SHTRH----FPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGS 60
           SH+ H    FPGKF K+ LRR  +HLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGS
Sbjct: 19  SHSHHKALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPPDRPLWFPGSTPPEWLDGS 78

Query: 61  LPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDA 120
           LPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLI NFSWYDA
Sbjct: 79  LPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIHNFSWYDA 138

Query: 121 GTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFW 180
           GTREYFADPTTLLVAQLGLMGW EGRRWADMVNPGSVDVDLKLPHKKKP PDVGYPGGFW
Sbjct: 139 GTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLKLPHKKKPTPDVGYPGGFW 198

Query: 181 FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHC 240
           FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAH+ADPGHC
Sbjct: 199 FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHC 258

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BLAST of MS023150 vs. ExPASy Swiss-Prot
Match: Q8LCQ4 (Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA6 PE=1 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 5.3e-109
Identity = 175/212 (82.55%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 28  VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARW 87
           VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDP+ LKWFAQAEL+H+RW
Sbjct: 54  VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRW 113

Query: 88  AMLAVAGILLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMV 147
           AMLAV GI++PE  E LG IENFSWYDAG+REYFAD TTL VAQ+ LMGWAEGRRWAD++
Sbjct: 114 AMLAVTGIIIPECLERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLI 173

Query: 148 NPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAF 207
            PGSVD++ K PHK  P PDVGYPGG WFD MMWGRGSPEPVMVLRTKEIKNGRLAMLAF
Sbjct: 174 KPGSVDIEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAF 233

Query: 208 VGLWFQAIYTGQGPLENLAAHLADPGHCNIFS 240
           +G  FQA YT Q P+ENL AHLADPGHCN+FS
Sbjct: 234 LGFCFQATYTSQDPIENLMAHLADPGHCNVFS 265

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BLAST of MS023150 vs. ExPASy Swiss-Prot
Match: P13869 (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 8.2e-86
Identity = 139/203 (68.47%), Postives = 160/203 (78.82%), Query Frame = 0


Query: 37  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 96
           PDRPLWFPGS+PPEWLDGSLPGDFGFDPLGLGSDPE LKW AQAEL+H+RWAML  AGI 
Sbjct: 63  PDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIF 122

Query: 97  LPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDL 156
           +PE+   +G++   SWY AG +EYF D TTL V +L L+GWAEGRRWAD++ PG V+ D 
Sbjct: 123 IPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDP 182

Query: 157 KLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 216
             P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IY
Sbjct: 183 IFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIY 242

Query: 217 TGQGPLENLAAHLADPGHCNIFS 240
           TG GP++NL AHLADPGH  IF+
Sbjct: 243 TGTGPIDNLFAHLADPGHATIFA 265

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BLAST of MS023150 vs. ExPASy Swiss-Prot
Match: P10708 (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB7 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 5.3e-85
Identity = 140/222 (63.06%), Postives = 164/222 (73.87%), Query Frame = 0


Query: 18  YSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWF 77
           YS    A+S  ++VC    PDRPLWFPGS+PP WLDGSLPGDFGFDPLGL SDPE L+W 
Sbjct: 45  YSTTPTARS-ATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWN 104

Query: 78  AQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGW 137
            QAEL+H RWAML  AGI +PE    +G++   SWY AG +EYF D TTL + +L L+GW
Sbjct: 105 QQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGW 164

Query: 138 AEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEI 197
           AEGRRWAD++ PG V+ D   P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEI
Sbjct: 165 AEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEI 224

Query: 198 KNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS 240
           KNGRLAMLA +G WFQ IYTG GP++NL AHLADPGH  IF+
Sbjct: 225 KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFA 265

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BLAST of MS023150 vs. ExPASy Swiss-Prot
Match: Q9SYW8 (Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA2 PE=1 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.6e-84
Identity = 135/203 (66.50%), Postives = 158/203 (77.83%), Query Frame = 0


Query: 37  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 96
           PDRP+WFPGS+PPEWLDGSLPGDFGFDPLGL SDP+ LKW  QAE++H RWAML  AGI 
Sbjct: 50  PDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIF 109

Query: 97  LPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDL 156
           +PE+   +G++   SWY AG +EYF D TTL V +L L+GWAEGRRWAD++ PGSV+ D 
Sbjct: 110 IPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDP 169

Query: 157 KLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 216
             P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IY
Sbjct: 170 VFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIY 229

Query: 217 TGQGPLENLAAHLADPGHCNIFS 240
           TG GP++NL AHLADPGH  IF+
Sbjct: 230 TGTGPIDNLFAHLADPGHATIFA 252

[Close]

BLAST of MS023150 vs. ExPASy Swiss-Prot
Match: P27521 (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA4 PE=1 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 7.0e-53
Identity = 108/224 (48.21%), Postives = 136/224 (60.71%), Query Frame = 0


Query: 14  LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPEL 73
           L RD S  +   S  +S  + +   +  W PG + P++L GSL GD GFDPLGL  DPE 
Sbjct: 30  LNRDLSFTSIGSSAKTSSFK-VEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPEN 89

Query: 74  LKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLG 133
           LKWF QAEL++ RWAML VAG+LLPE F  +G+I    WYDAG  +YFA  +TL V +  
Sbjct: 90  LKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFI 149

Query: 134 LMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLR 193
           L  + E RRW D+ NPGSV+ D        P  +VGYPGG  F+P+ +      P    +
Sbjct: 150 LFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGI-FNPLNFA-----PTQEAK 209

Query: 194 TKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNI 238
            KE+ NGRLAMLAF+G   Q   TG+GP ENL  HL+DP H  I
Sbjct: 210 EKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTI 246

[Close]

BLAST of MS023150 vs. ExPASy TrEMBL
Match: A0A6J1D327 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111016538 PE=3 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 4.7e-145
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   SHTRHFPGKFTKHLRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDF 60
           SHTRHFPGKFTKHLRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDF
Sbjct: 20  SHTRHFPGKFTKHLRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDF 79

Query: 61  GFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREY 120
           GFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREY
Sbjct: 80  GFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREY 139

Query: 121 FADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMM 180
           FADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMM
Sbjct: 140 FADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMM 199

Query: 181 WGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS 240
           WGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS
Sbjct: 200 WGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS 258

[Close]

BLAST of MS023150 vs. ExPASy TrEMBL
Match: A0A6J1ERI7 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435884 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 2.6e-135
Identity = 227/244 (93.03%), Postives = 233/244 (95.49%), Query Frame = 0


Query: 1   SHTRH----FPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGS 60
           SH+ H    FPGKF K+ LRR  +HLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGS
Sbjct: 19  SHSHHRALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPPDRPLWFPGSTPPEWLDGS 78

Query: 61  LPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDA 120
           LPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLI+NFSWYDA
Sbjct: 79  LPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDA 138

Query: 121 GTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFW 180
           GTREYFADPTTLLVAQLGLMGW EGRRWADMVNPGSVDVDLKLPHKKKP PDVGYPGGFW
Sbjct: 139 GTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLKLPHKKKPTPDVGYPGGFW 198

Query: 181 FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHC 240
           FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAH+ADPGHC
Sbjct: 199 FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHC 258

[Close]

BLAST of MS023150 vs. ExPASy TrEMBL
Match: A0A6J1ETS8 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435884 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 2.6e-135
Identity = 227/244 (93.03%), Postives = 233/244 (95.49%), Query Frame = 0


Query: 1   SHTRH----FPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGS 60
           SH+ H    FPGKF K+ LRR  +HLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGS
Sbjct: 20  SHSHHRALNFPGKFPKYNLRRGSTHLNAAKSGVSSVCEPLPPDRPLWFPGSTPPEWLDGS 79

Query: 61  LPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDA 120
           LPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLI+NFSWYDA
Sbjct: 80  LPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDA 139

Query: 121 GTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFW 180
           GTREYFADPTTLLVAQLGLMGW EGRRWADMVNPGSVDVDLKLPHKKKP PDVGYPGGFW
Sbjct: 140 GTREYFADPTTLLVAQLGLMGWVEGRRWADMVNPGSVDVDLKLPHKKKPTPDVGYPGGFW 199

Query: 181 FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHC 240
           FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAH+ADPGHC
Sbjct: 200 FDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHC 259

[Close]

BLAST of MS023150 vs. ExPASy TrEMBL
Match: A0A6J1HWP6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467340 PE=3 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 9.9e-135
Identity = 224/236 (94.92%), Postives = 229/236 (97.03%), Query Frame = 0


Query: 5   HFPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFD 64
           +FPGKF K+ LRR  SHLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFD
Sbjct: 42  NFPGKFPKYNLRRGSSHLNAAKSGVSSVCEPLPPDRPLWFPGSTPPEWLDGSLPGDFGFD 101

Query: 65  PLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREYFAD 124
           PLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLI+NFSWYDAGTREYFAD
Sbjct: 102 PLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFAD 161

Query: 125 PTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGR 184
           PTTLLVAQLGLMGW EGRRWADMVNPG VDVDLKLPHKKKP PDVGYPGGFWFDPMMWGR
Sbjct: 162 PTTLLVAQLGLMGWVEGRRWADMVNPGCVDVDLKLPHKKKPTPDVGYPGGFWFDPMMWGR 221

Query: 185 GSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS 240
           GSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAH+ADPGHCNIFS
Sbjct: 222 GSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFS 277

[Close]

BLAST of MS023150 vs. ExPASy TrEMBL
Match: A0A6J1HS79 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467340 PE=3 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 9.9e-135
Identity = 224/236 (94.92%), Postives = 229/236 (97.03%), Query Frame = 0


Query: 5   HFPGKFTKH-LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFD 64
           +FPGKF K+ LRR  SHLNAAKSGVSSVCEPLPPDRPLWFPGS+PPEWLDGSLPGDFGFD
Sbjct: 43  NFPGKFPKYNLRRGSSHLNAAKSGVSSVCEPLPPDRPLWFPGSTPPEWLDGSLPGDFGFD 102

Query: 65  PLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREYFAD 124
           PLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLI+NFSWYDAGTREYFAD
Sbjct: 103 PLGLGSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIQNFSWYDAGTREYFAD 162

Query: 125 PTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGR 184
           PTTLLVAQLGLMGW EGRRWADMVNPG VDVDLKLPHKKKP PDVGYPGGFWFDPMMWGR
Sbjct: 163 PTTLLVAQLGLMGWVEGRRWADMVNPGCVDVDLKLPHKKKPTPDVGYPGGFWFDPMMWGR 222

Query: 185 GSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNIFS 240
           GSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAH+ADPGHCNIFS
Sbjct: 223 GSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHVADPGHCNIFS 278

[Close]

BLAST of MS023150 vs. TAIR 10
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6 )

HSP 1 Score: 395.2 bits (1014), Expect = 3.7e-110
Identity = 175/212 (82.55%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 28  VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARW 87
           VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDP+ LKWFAQAEL+H+RW
Sbjct: 54  VSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTLKWFAQAELIHSRW 113

Query: 88  AMLAVAGILLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMV 147
           AMLAV GI++PE  E LG IENFSWYDAG+REYFAD TTL VAQ+ LMGWAEGRRWAD++
Sbjct: 114 AMLAVTGIIIPECLERLGFIENFSWYDAGSREYFADSTTLFVAQMVLMGWAEGRRWADLI 173

Query: 148 NPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAF 207
            PGSVD++ K PHK  P PDVGYPGG WFD MMWGRGSPEPVMVLRTKEIKNGRLAMLAF
Sbjct: 174 KPGSVDIEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMVLRTKEIKNGRLAMLAF 233

Query: 208 VGLWFQAIYTGQGPLENLAAHLADPGHCNIFS 240
           +G  FQA YT Q P+ENL AHLADPGHCN+FS
Sbjct: 234 LGFCFQATYTSQDPIENLMAHLADPGHCNVFS 265

[Close]

BLAST of MS023150 vs. TAIR 10
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2 )

HSP 1 Score: 313.2 bits (801), Expect = 1.9e-85
Identity = 135/203 (66.50%), Postives = 158/203 (77.83%), Query Frame = 0


Query: 37  PDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVAGIL 96
           PDRP+WFPGS+PPEWLDGSLPGDFGFDPLGL SDP+ LKW  QAE++H RWAML  AGI 
Sbjct: 50  PDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIF 109

Query: 97  LPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLGLMGWAEGRRWADMVNPGSVDVDL 156
           +PE+   +G++   SWY AG +EYF D TTL V +L L+GWAEGRRWAD++ PGSV+ D 
Sbjct: 110 IPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDP 169

Query: 157 KLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIY 216
             P+ K    DVGYPGG WFDP+ WG GSP  +  LRTKEIKNGRLAMLA +G WFQ IY
Sbjct: 170 VFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIY 229

Query: 217 TGQGPLENLAAHLADPGHCNIFS 240
           TG GP++NL AHLADPGH  IF+
Sbjct: 230 TGTGPIDNLFAHLADPGHATIFA 252

[Close]

BLAST of MS023150 vs. TAIR 10
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4 )

HSP 1 Score: 208.8 bits (530), Expect = 5.0e-54
Identity = 108/224 (48.21%), Postives = 136/224 (60.71%), Query Frame = 0


Query: 14  LRRDYSHLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPEL 73
           L RD S  +   S  +S  + +   +  W PG + P++L GSL GD GFDPLGL  DPE 
Sbjct: 30  LNRDLSFTSIGSSAKTSSFK-VEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPEN 89

Query: 74  LKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREYFADPTTLLVAQLG 133
           LKWF QAEL++ RWAML VAG+LLPE F  +G+I    WYDAG  +YFA  +TL V +  
Sbjct: 90  LKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFI 149

Query: 134 LMGWAEGRRWADMVNPGSVDVDLKLPHKKKPAPDVGYPGGFWFDPMMWGRGSPEPVMVLR 193
           L  + E RRW D+ NPGSV+ D        P  +VGYPGG  F+P+ +      P    +
Sbjct: 150 LFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGI-FNPLNFA-----PTQEAK 209

Query: 194 TKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNI 238
            KE+ NGRLAMLAF+G   Q   TG+GP ENL  HL+DP H  I
Sbjct: 210 EKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTI 246

[Close]

BLAST of MS023150 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 183.7 bits (465), Expect = 1.7e-46
Identity = 99/234 (42.31%), Postives = 140/234 (59.83%), Query Frame = 0


Query: 13  HLRRDYS-----HLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGL 72
           H RRD S      +++ K+    +   +  +R  W PG +PP +LDG+L GD+GFDPLGL
Sbjct: 15  HHRRDASSVITRRISSVKAAGGGINPTVAVERATWLPGLNPPPYLDGNLAGDYGFDPLGL 74

Query: 73  GSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREY-FADPTT 132
           G DPE LKW+ QAEL+H+R+AML VAGIL  +   + G+     WY+AG  ++ FA   T
Sbjct: 75  GEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKT 134

Query: 133 LLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPA---PDVGYPGGFWFDPMMWGR 192
           L+V Q  LMG+AE +R+ D V+PGS   +       + A    + GYPGG   +P+   +
Sbjct: 135 LIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAK 194

Query: 193 GSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNI 238
              +     + KEIKNGRLAM+A +G + QA  T  GP++NL  HL++P H  I
Sbjct: 195 -DVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTI 247

[Close]

BLAST of MS023150 vs. TAIR 10
Match: AT1G45474.2 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 183.7 bits (465), Expect = 1.7e-46
Identity = 99/234 (42.31%), Postives = 140/234 (59.83%), Query Frame = 0


Query: 13  HLRRDYS-----HLNAAKSGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGL 72
           H RRD S      +++ K+    +   +  +R  W PG +PP +LDG+L GD+GFDPLGL
Sbjct: 15  HHRRDASSVITRRISSVKAAGGGINPTVAVERATWLPGLNPPPYLDGNLAGDYGFDPLGL 74

Query: 73  GSDPELLKWFAQAELMHARWAMLAVAGILLPEWFESLGLIENFSWYDAGTREY-FADPTT 132
           G DPE LKW+ QAEL+H+R+AML VAGIL  +   + G+     WY+AG  ++ FA   T
Sbjct: 75  GEDPESLKWYVQAELVHSRFAMLGVAGILFTDLLRTTGIRNLPVWYEAGAVKFDFASTKT 134

Query: 133 LLVAQLGLMGWAEGRRWADMVNPGSVDVDLKLPHKKKPA---PDVGYPGGFWFDPMMWGR 192
           L+V Q  LMG+AE +R+ D V+PGS   +       + A    + GYPGG   +P+   +
Sbjct: 135 LIVVQFLLMGFAETKRYMDFVSPGSQAKEGSFFFGLEAALEGLEPGYPGGPLLNPLGLAK 194

Query: 193 GSPEPVMVLRTKEIKNGRLAMLAFVGLWFQAIYTGQGPLENLAAHLADPGHCNI 238
              +     + KEIKNGRLAM+A +G + QA  T  GP++NL  HL++P H  I
Sbjct: 195 -DVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTI 247

The following BLAST results are available for this feature:

BLAST of MS023150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147671.1	9.8e-145	100.00	photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Momordica charan...	[more]
XP_022929243.1	5.4e-135	93.03	photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X2 [Cucur...	[more]
XP_022929235.1	5.4e-135	93.03	photosystem I chlorophyll a/b-binding protein 6, chloroplastic isoform X1 [Cucur...	[more]
KAG7021985.1	5.4e-135	93.03	Photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Cucurbita argyro...	[more]
KAG6588096.1	9.2e-135	93.03	Photosystem I chlorophyll a/b-binding protein 6, chloroplastic, partial [Cucurbi...	[more]

BLAST of MS023150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LCQ4	5.3e-109	82.55	Photosystem I chlorophyll a/b-binding protein 6, chloroplastic OS=Arabidopsis th...	[more]
P13869	8.2e-86	68.47	Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S...	[more]
P10708	5.3e-85	63.06	Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum OX=4081...	[more]
Q9SYW8	2.6e-84	66.50	Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis th...	[more]
P27521	7.0e-53	48.21	Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of MS023150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D327	4.7e-145	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1ERI7	2.6e-135	93.03	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1ETS8	2.6e-135	93.03	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1HWP6	9.9e-135	94.92	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1HS79	9.9e-135	94.92	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of MS023150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19150.1	3.7e-110	82.55	photosystem I light harvesting complex gene 6	[more]
AT3G61470.1	1.9e-85	66.50	photosystem I light harvesting complex gene 2	[more]
AT3G47470.1	5.0e-54	48.21	light-harvesting chlorophyll-protein complex I subunit A4	[more]
AT1G45474.1	1.7e-46	42.31	photosystem I light harvesting complex gene 5	[more]
AT1G45474.2	1.7e-46	42.31	photosystem I light harvesting complex gene 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 48..214 e-value: 4.3E-52 score: 176.9
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 49..234 e-value: 3.5E-68 score: 231.2
None	No IPR available	PANTHER	PTHR21649:SF5	PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTIC	coord: 14..239
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 38..238
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 14..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023150.1	MS023150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0016020	membrane