MS023110 (gene) Bitter gourd (TR) v1

Overview


Name	MS023110
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	WD repeat-containing protein VIP3
Location	scaffold78: 213769 .. 215954 (+)
RNA-Seq Expression	MS023110
Synteny	MS023110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACTCGCGGGTCTCAAATCCGTTGAAAATGCCCACGACGAGTCGGTATGGGCGGCGACTTGGGTTCCGGCCACCGACAATCGCCCCTCCGTCCTCCTCACCGGCTCCCTCGACGAGACCGTCAAGCTCTGGAAGCCCGACGAGCTCGAGTTGGAGCGGACCAACACCGGCCACTGCCTCGGCGTCGTCTCTGTTGCTGCTCATCCTTCCGGTTTCATAGCTGCCTCCGCTTCTCTCGATAGCTTTGTTCGCGTCTTTGAAGTCGATTCCAACTCCACAATCGCCACTCTCGAGGCGCCGCCTTCTGAGGTCTGGCAAATGCGCTTCAATTCCGAGGTATAATTTTGCGGAATTCTTTTCTCGACTTCTCCGTTTTGATTTTCTGTATCTTTCGGGCGATTGGATGGTTTAGCTGAGATTTTGAGATTGCTTTGCGGTTCCCGGAATACTTCTCAACTACTCCGGTTTTGATTTTACTACTTCAGATTGATTTTGCTAAGAATTCGAGATGACTTGCCCTTCACATAACCTAAACTAGTAGACTTTAGATTCGCGCCCTAGAGATGAAAATGTTTGGTTGCAATTATCTTCCAGTTGATTTTACATATGCTTGTGTTATTCAGTATTCCAAACATAATGTAGGTAGTCACTAAGATCTTTTAATTATCATAATGCAGCTAGTAAGCTCCATCAACTCATTATCTGTAGCATCAGATCTCTTTCTGATAGAAATGCTAATTGACATAGTAGATTTTTCTTTTGTTCTGGTTCTTTGTTGGTAACAACTTACACGATGCCTCATTCAGTAGATTCTTGAATGAAGGAAACATCTGTTGATGACTATGTTTTGGTGGAGTATAGCGGTTTATTGTTAGTTTCACATCACTTGGATCAATTGTTCACTTGCATTAAATTTTACTGAGAAGGTAGTCTATGGAATTTGATGAGAAAGATTGCATGTAGGTATGCAAATTGATGGACTGTGTTGAATCTGCGTTATGAGTCATATCTGGTAGCTATCAATACTTTCCATATGCAAATTAGCCCTTTAAATAGAGAAATTGAAATCCGTCTGTGAAAGTGACACTGACTTATTGAGATGTCTCTTTTAAATAAATATTTTATAACTACTACCGTATTTTATAATCGACAAACAATGAATGAATATGATGCATATAGTGTGGTGTTGTTCAGTACTGCTTGTTGTGATAGGTAATTTTGATGGTTCTCTTCATACTAGCACAAATGCCAGTTGCTGTTATAATTGCAAACTCATTATCAGATGTATATCAAAACTGTGGTTCCAGTAACCCTATAAATTTATTGGTATCTGATCATTCTTTGATGTCATTTATGACAAATTACACTGTTCTAACTTTTATGCAAACCTGTTTGTTTCTTCTAACATAACAACTTTGTCCTGCATGCTCATGAATTCAACAACCTGAATGAAGGAGAGATGTGCTTCAGTTCTATTCAATCTGATTATAAAATAACAGGAAAACCATTTAATCCGTGTCACATGTCATGTCCAAACTTAACATTAACTTTTGCATCAGGGTACCATGTTAGCAGTTGCTGGTGGAGGCAGCGCATCAATTAAGCTTTGGGACACAAGCACATGGAAGCTGGCTGCAACCTTATCAATTCCTCGTCCAGAAGGACCTAAGCCCACTGATAAAACTGCTAGCAAGAAGTTTGTACTTTCAGTAGCATGGAGCGTTGATGGGAGAAGACTTGCTTGCGGTTCAATGGATGGAACCATTTCCATCTTCGACGTAGCCCGCGCAAAGTTTCTACACCATTTGGAAGGCCACTTCATGCCAGTGCGATCCCTTGTGTATTCACCAGTTGAGCCACGACTGCTCTTTTCAGCCTCTGATGATGCTCATGTGCACATGTATGATGCGGAGGGGAAAACTCTGATTGGAGCCATGTCCGGCCATTCAAGTTGGGTGTTGAGCGTAGATGCAAGCCCTGATGGTGCTGCTGTTGCAACAGGTTCAAGCGACAGAACTGTTAGGCTCTGGGATCTCAACATGAGAACAGCTGTTCAGACAATGACTAATCATAGCGATCAGGTCTGGGGGGTTGCATTTCGACCACCTGGTGGGGCGGGCGTGCGAGCTGGTCGACTTGCTAGCGTGTCTGATGACAAGAGCATCTCCCTGTACGATTACTCT

mRNA sequence

ATGAAACTCGCGGGTCTCAAATCCGTTGAAAATGCCCACGACGAGTCGGTATGGGCGGCGACTTGGGTTCCGGCCACCGACAATCGCCCCTCCGTCCTCCTCACCGGCTCCCTCGACGAGACCGTCAAGCTCTGGAAGCCCGACGAGCTCGAGTTGGAGCGGACCAACACCGGCCACTGCCTCGGCGTCGTCTCTGTTGCTGCTCATCCTTCCGGTTTCATAGCTGCCTCCGCTTCTCTCGATAGCTTTGTTCGCGTCTTTGAAGTCGATTCCAACTCCACAATCGCCACTCTCGAGGCGCCGCCTTCTGAGGTCTGGCAAATGCGCTTCAATTCCGAGGGTACCATGTTAGCAGTTGCTGGTGGAGGCAGCGCATCAATTAAGCTTTGGGACACAAGCACATGGAAGCTGGCTGCAACCTTATCAATTCCTCGTCCAGAAGGACCTAAGCCCACTGATAAAACTGCTAGCAAGAAGTTTGTACTTTCAGTAGCATGGAGCGTTGATGGGAGAAGACTTGCTTGCGGTTCAATGGATGGAACCATTTCCATCTTCGACGTAGCCCGCGCAAAGTTTCTACACCATTTGGAAGGCCACTTCATGCCAGTGCGATCCCTTGTGTATTCACCAGTTGAGCCACGACTGCTCTTTTCAGCCTCTGATGATGCTCATGTGCACATGTATGATGCGGAGGGGAAAACTCTGATTGGAGCCATGTCCGGCCATTCAAGTTGGGTGTTGAGCGTAGATGCAAGCCCTGATGGTGCTGCTGTTGCAACAGGTTCAAGCGACAGAACTGTTAGGCTCTGGGATCTCAACATGAGAACAGCTGTTCAGACAATGACTAATCATAGCGATCAGGTCTGGGGGGTTGCATTTCGACCACCTGGTGGGGCGGGCGTGCGAGCTGGTCGACTTGCTAGCGTGTCTGATGACAAGAGCATCTCCCTGTACGATTACTCT

Coding sequence (CDS)

ATGAAACTCGCGGGTCTCAAATCCGTTGAAAATGCCCACGACGAGTCGGTATGGGCGGCGACTTGGGTTCCGGCCACCGACAATCGCCCCTCCGTCCTCCTCACCGGCTCCCTCGACGAGACCGTCAAGCTCTGGAAGCCCGACGAGCTCGAGTTGGAGCGGACCAACACCGGCCACTGCCTCGGCGTCGTCTCTGTTGCTGCTCATCCTTCCGGTTTCATAGCTGCCTCCGCTTCTCTCGATAGCTTTGTTCGCGTCTTTGAAGTCGATTCCAACTCCACAATCGCCACTCTCGAGGCGCCGCCTTCTGAGGTCTGGCAAATGCGCTTCAATTCCGAGGGTACCATGTTAGCAGTTGCTGGTGGAGGCAGCGCATCAATTAAGCTTTGGGACACAAGCACATGGAAGCTGGCTGCAACCTTATCAATTCCTCGTCCAGAAGGACCTAAGCCCACTGATAAAACTGCTAGCAAGAAGTTTGTACTTTCAGTAGCATGGAGCGTTGATGGGAGAAGACTTGCTTGCGGTTCAATGGATGGAACCATTTCCATCTTCGACGTAGCCCGCGCAAAGTTTCTACACCATTTGGAAGGCCACTTCATGCCAGTGCGATCCCTTGTGTATTCACCAGTTGAGCCACGACTGCTCTTTTCAGCCTCTGATGATGCTCATGTGCACATGTATGATGCGGAGGGGAAAACTCTGATTGGAGCCATGTCCGGCCATTCAAGTTGGGTGTTGAGCGTAGATGCAAGCCCTGATGGTGCTGCTGTTGCAACAGGTTCAAGCGACAGAACTGTTAGGCTCTGGGATCTCAACATGAGAACAGCTGTTCAGACAATGACTAATCATAGCGATCAGGTCTGGGGGGTTGCATTTCGACCACCTGGTGGGGCGGGCGTGCGAGCTGGTCGACTTGCTAGCGTGTCTGATGACAAGAGCATCTCCCTGTACGATTACTCT

Protein sequence

MKLAGLKSVENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWKPDELELERTNTGHCLGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVAGGGSASIKLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDGTISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMSGHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAGVRAGRLASVSDDKSISLYDYS

Homology

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BLAST of MS023110 vs. NCBI nr
Match: XP_022147613.1 (WD repeat-containing protein VIP3 [Momordica charantia])

HSP 1 Score: 648.7 bits (1672), Expect = 2.7e-182
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0


Query: 1   MKLAGLKSVENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWKPDELELERTNTGHC 60
           MKLAGLKSVENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWKPDELELERTNTGHC
Sbjct: 1   MKLAGLKSVENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWKPDELELERTNTGHC 60

Query: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVA 120
           LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVA
Sbjct: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVA 120

Query: 121 GGGSASIKLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIKLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG
Sbjct: 121 GGGSASIKLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180

Query: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS
Sbjct: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAG 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAG
Sbjct: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAG 300

Query: 301 VRAGRLASVSDDKSISLYDYS 322
           VRAGRLASVSDDKSISLYDYS
Sbjct: 301 VRAGRLASVSDDKSISLYDYS 321

[Close]

BLAST of MS023110 vs. NCBI nr
Match: XP_038878969.1 (WD repeat-containing protein VIP3 [Benincasa hispida])

HSP 1 Score: 634.0 bits (1634), Expect = 6.9e-178
Identity = 310/321 (96.57%), Postives = 318/321 (99.07%), Query Frame = 0


Query: 1   MKLAGLKSVENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWKPDELELERTNTGHC 60
           MKLAGLKSVENAH+ESVWAATWVPATDNRPS+LLTGSLDETVKLWK DEL+LERTNTGHC
Sbjct: 1   MKLAGLKSVENAHEESVWAATWVPATDNRPSLLLTGSLDETVKLWKSDELDLERTNTGHC 60

Query: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVA 120
           LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFN EGTMLAVA
Sbjct: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120

Query: 121 GGGSASIKLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIKLWDT+TWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWS+DGRRLACGSMDG
Sbjct: 121 GGGSASIKLWDTNTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSIDGRRLACGSMDG 180

Query: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TIS+FDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS
Sbjct: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAG 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGV FRPPGGAG
Sbjct: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVTFRPPGGAG 300

Query: 301 VRAGRLASVSDDKSISLYDYS 322
           +R+GRLASVSDDKSISLYDYS
Sbjct: 301 MRSGRLASVSDDKSISLYDYS 321

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BLAST of MS023110 vs. NCBI nr
Match: XP_008450896.1 (PREDICTED: WD repeat-containing protein VIP3 [Cucumis melo] >KAA0055801.1 WD repeat-containing protein VIP3 [Cucumis melo var. makuwa] >TYK10052.1 WD repeat-containing protein VIP3 [Cucumis melo var. makuwa])

HSP 1 Score: 634.0 bits (1634), Expect = 6.9e-178
Identity = 311/321 (96.88%), Postives = 317/321 (98.75%), Query Frame = 0


Query: 1   MKLAGLKSVENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWKPDELELERTNTGHC 60
           MKLAGLKSVENAH+ESVWA TWVPATDNRPS+LLTGSLDETVKLWK DEL+LERTNTGHC
Sbjct: 1   MKLAGLKSVENAHEESVWAVTWVPATDNRPSLLLTGSLDETVKLWKSDELDLERTNTGHC 60

Query: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVA 120
           LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFN EGTMLAVA
Sbjct: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120

Query: 121 GGGSASIKLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIKLWDT+TWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWS+DGRRLACGSMDG
Sbjct: 121 GGGSASIKLWDTNTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSIDGRRLACGSMDG 180

Query: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS
Sbjct: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAG 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGG G
Sbjct: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGVG 300

Query: 301 VRAGRLASVSDDKSISLYDYS 322
           VR+GRLASVSDDKSISLYDYS
Sbjct: 301 VRSGRLASVSDDKSISLYDYS 321

[Close]

BLAST of MS023110 vs. NCBI nr
Match: KAE8653439.1 (hypothetical protein Csa_006892 [Cucumis sativus])

HSP 1 Score: 632.9 bits (1631), Expect = 1.5e-177
Identity = 310/321 (96.57%), Postives = 317/321 (98.75%), Query Frame = 0


Query: 1   MKLAGLKSVENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWKPDELELERTNTGHC 60
           MKLAGLKSVENAH+ESVWAATWVPATD RPS+LLTGSLDETVKLWK DEL+LERTNTGHC
Sbjct: 484 MKLAGLKSVENAHEESVWAATWVPATDTRPSLLLTGSLDETVKLWKSDELDLERTNTGHC 543

Query: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVA 120
           LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFN EGTMLAVA
Sbjct: 544 LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 603

Query: 121 GGGSASIKLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIKLWDT+TWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWS+DGRRLACGSMDG
Sbjct: 604 GGGSASIKLWDTNTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSIDGRRLACGSMDG 663

Query: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TIS+FDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS
Sbjct: 664 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 723

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAG 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGG G
Sbjct: 724 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGVG 783

Query: 301 VRAGRLASVSDDKSISLYDYS 322
           VR+GRLASVSDDKSISLYDYS
Sbjct: 784 VRSGRLASVSDDKSISLYDYS 804

[Close]

BLAST of MS023110 vs. NCBI nr
Match: XP_004144016.1 (WD repeat-containing protein VIP3 [Cucumis sativus])

HSP 1 Score: 632.9 bits (1631), Expect = 1.5e-177
Identity = 310/321 (96.57%), Postives = 317/321 (98.75%), Query Frame = 0


Query: 1   MKLAGLKSVENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWKPDELELERTNTGHC 60
           MKLAGLKSVENAH+ESVWAATWVPATD RPS+LLTGSLDETVKLWK DEL+LERTNTGHC
Sbjct: 1   MKLAGLKSVENAHEESVWAATWVPATDTRPSLLLTGSLDETVKLWKSDELDLERTNTGHC 60

Query: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVA 120
           LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFN EGTMLAVA
Sbjct: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120

Query: 121 GGGSASIKLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIKLWDT+TWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWS+DGRRLACGSMDG
Sbjct: 121 GGGSASIKLWDTNTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSIDGRRLACGSMDG 180

Query: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TIS+FDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS
Sbjct: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAG 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGG G
Sbjct: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGVG 300

Query: 301 VRAGRLASVSDDKSISLYDYS 322
           VR+GRLASVSDDKSISLYDYS
Sbjct: 301 VRSGRLASVSDDKSISLYDYS 321

[Close]

BLAST of MS023110 vs. ExPASy Swiss-Prot
Match: Q9SZQ5 (WD repeat-containing protein VIP3 OS=Arabidopsis thaliana OX=3702 GN=VIP3 PE=1 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 4.7e-153
Identity = 253/321 (78.82%), Postives = 297/321 (92.52%), Query Frame = 0


Query: 1   MKLAGLKSVENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWKPDELELERTNTGHC 60
           MKLAGLKS+ENAH++SVWAATWVPAT++RP++LLTGSLDETVKLW+PDEL+L RTNTGH 
Sbjct: 1   MKLAGLKSIENAHEDSVWAATWVPATEDRPALLLTGSLDETVKLWRPDELDLVRTNTGHS 60

Query: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVA 120
           LGV ++AAHPSG IAAS+S+DSFVRVF+VD+N+TIA LEAPPSEVW M+F  +GT+LAVA
Sbjct: 61  LGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVA 120

Query: 121 GGGSASIKLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GG SAS+KLWDT++W+L +TLSIPRP+ PKP+DKT+SKKFVLSVAWS +G+RLACGSMDG
Sbjct: 121 GGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDG 180

Query: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TI +FDV R+K LH LEGH MPVRSLV+SPV+PR+LFS SDD HV+M+DAEGKTL+G+MS
Sbjct: 181 TICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAG 300
           GH+SWVLSVDASPDG A+ATGSSDRTVRLWDL MR A+QTM+NH+DQVW VAFRPPGG G
Sbjct: 241 GHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTG 300

Query: 301 VRAGRLASVSDDKSISLYDYS 322
           VRAGRLASVSDDKS+SLYDYS
Sbjct: 301 VRAGRLASVSDDKSVSLYDYS 321

[Close]

BLAST of MS023110 vs. ExPASy Swiss-Prot
Match: Q6PBD6 (WD repeat-containing protein 61 OS=Xenopus tropicalis OX=8364 GN=wdr61 PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.3e-62
Identity = 123/312 (39.42%), Postives = 192/312 (61.54%), Query Frame = 0


Query: 10  ENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWK--PDELELERTNTGHCLGVVSVA 69
           E+AH++++W+  W   +++   ++++GSLD+ VK+WK   + LEL+ T  GH LGVVSV 
Sbjct: 12  EHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVD 71

Query: 70  AHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVAGGGSASI 129
             PSG I AS+SLD+ +R+++++S   I  ++A P + W + F+ +   LA  G     +
Sbjct: 72  VSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLA-TGSHVGKV 131

Query: 130 KLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDGTISIFDV 189
            ++   T             G K        KF+LS+A+S DG+ LA G++DG I+IFD+
Sbjct: 132 NIFGVET-------------GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 191

Query: 190 ARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMSGHSSWVL 249
           A  K LH LEGH MP+RSL +SP + +LL +ASDD ++ +Y+ +  +L   +SGH SWVL
Sbjct: 192 ATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVL 251

Query: 250 SVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAGVRAGRLA 309
           +V  SPD     + SSD++V++WD++ RT V T  +H DQVWGV +   G       ++ 
Sbjct: 252 NVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNG------SKIV 302

Query: 310 SVSDDKSISLYD 320
           SV+DD+ I +YD
Sbjct: 312 SVADDQEIHVYD 302

[Close]

BLAST of MS023110 vs. ExPASy Swiss-Prot
Match: Q6P5M2 (WD repeat-containing protein 61 OS=Danio rerio OX=7955 GN=wdr61 PE=2 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 3.8e-62
Identity = 121/312 (38.78%), Postives = 190/312 (60.90%), Query Frame = 0


Query: 10  ENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWK--PDELELERTNTGHCLGVVSVA 69
           E+AH++++W A W  +  +    ++TGSLD+ VK+WK   ++LEL+ T  GH LGVVSV 
Sbjct: 12  EHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVN 71

Query: 70  AHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVAGGGSASI 129
              +G IAAS+SLD+ +R++++++   I +++A P + W + F+ +   +A  G     +
Sbjct: 72  ISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIA-TGSHLGKV 131

Query: 130 KLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDGTISIFDV 189
            ++   +             G K        KF+LS+A+S DG+ LA G++DG I+IFD+
Sbjct: 132 NIFGVES-------------GKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 191

Query: 190 ARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMSGHSSWVL 249
           A  K LH LEGH MP+RSL +SP + +LL +ASDD ++ +YD +   L G +SGH SWVL
Sbjct: 192 ATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVL 251

Query: 250 SVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAGVRAGRLA 309
           SV  SPD     + SSD+++++WD + R+ V T  +H DQVW V + P G       ++ 
Sbjct: 252 SVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTG------SKIV 302

Query: 310 SVSDDKSISLYD 320
           S  DD++I +YD
Sbjct: 312 SAGDDRAIHIYD 302

[Close]

BLAST of MS023110 vs. ExPASy Swiss-Prot
Match: Q5ZJH5 (WD repeat-containing protein 61 OS=Gallus gallus OX=9031 GN=WDR61 PE=2 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 5.0e-62
Identity = 123/312 (39.42%), Postives = 186/312 (59.62%), Query Frame = 0


Query: 10  ENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWK--PDELELERTNTGHCLGVVSVA 69
           E AHD+++W+  W     N    +++GSLD+ VK+WK   ++L+L+ T  GH LGVVSV 
Sbjct: 12  EQAHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVD 71

Query: 70  AHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVAGGGSASI 129
              +G IAAS+SLD+ +R++++++   I +++A P + W + F+ +   LA  G     +
Sbjct: 72  ISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLA-TGSHVGKV 131

Query: 130 KLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDGTISIFDV 189
            ++   T             G K        KF+LS+A+S DG+ LA G++DG I+IFD+
Sbjct: 132 NIFGVET-------------GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 191

Query: 190 ARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMSGHSSWVL 249
           A  K LH LEGH MP+RSL +SP + +LL +ASDD ++ +YD +   L G +SGH SWVL
Sbjct: 192 ATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVL 251

Query: 250 SVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAGVRAGRLA 309
           +V   PD     + SSD++V++WD   RT V T  +H DQVWGV +   G       ++ 
Sbjct: 252 NVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSG------SKIV 302

Query: 310 SVSDDKSISLYD 320
           SV DD+ I +YD
Sbjct: 312 SVGDDQEIHIYD 302

[Close]

BLAST of MS023110 vs. ExPASy Swiss-Prot
Match: Q6GMD2 (WD repeat-containing protein 61 OS=Xenopus laevis OX=8355 GN=wdr61 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.4e-61
Identity = 122/312 (39.10%), Postives = 191/312 (61.22%), Query Frame = 0


Query: 10  ENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWK--PDELELERTNTGHCLGVVSVA 69
           E+AH++++W+  W   +++   ++++GSLD+ VK+WK   + LE++    GH LGVVSV 
Sbjct: 12  EHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVD 71

Query: 70  AHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVAGGGSASI 129
             PSG I AS+SLD+ +R+++++S   I +++A P + W + F+ +   LA  G     +
Sbjct: 72  VSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLA-TGSHVGKV 131

Query: 130 KLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDGTISIFDV 189
            ++   T             G K        KF+LS+A+S DG+ LA G++DG I+IFD+
Sbjct: 132 NIFGVET-------------GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 191

Query: 190 ARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMSGHSSWVL 249
           A  K LH LEGH MP+RSL +S  + +LL +ASDD ++ +YD +  +L   +SGH SWVL
Sbjct: 192 ATGKLLHTLEGHAMPIRSLTFS-TDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVL 251

Query: 250 SVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAGVRAGRLA 309
           +V  SPD A   + SSD++V++WD++ RT V T  +H DQVWGV +   G       ++ 
Sbjct: 252 NVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNG------SKIV 302

Query: 310 SVSDDKSISLYD 320
           SV DD+ I +YD
Sbjct: 312 SVGDDQEIHVYD 302

[Close]

BLAST of MS023110 vs. ExPASy TrEMBL
Match: A0A6J1D1S8 (WD repeat-containing protein VIP3 OS=Momordica charantia OX=3673 GN=LOC111016495 PE=4 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.3e-182
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0


Query: 1   MKLAGLKSVENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWKPDELELERTNTGHC 60
           MKLAGLKSVENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWKPDELELERTNTGHC
Sbjct: 1   MKLAGLKSVENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWKPDELELERTNTGHC 60

Query: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVA 120
           LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVA
Sbjct: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVA 120

Query: 121 GGGSASIKLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIKLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG
Sbjct: 121 GGGSASIKLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180

Query: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS
Sbjct: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAG 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAG
Sbjct: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAG 300

Query: 301 VRAGRLASVSDDKSISLYDYS 322
           VRAGRLASVSDDKSISLYDYS
Sbjct: 301 VRAGRLASVSDDKSISLYDYS 321

[Close]

BLAST of MS023110 vs. ExPASy TrEMBL
Match: A0A5D3CFF6 (WD repeat-containing protein VIP3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001850 PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 3.3e-178
Identity = 311/321 (96.88%), Postives = 317/321 (98.75%), Query Frame = 0


Query: 1   MKLAGLKSVENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWKPDELELERTNTGHC 60
           MKLAGLKSVENAH+ESVWA TWVPATDNRPS+LLTGSLDETVKLWK DEL+LERTNTGHC
Sbjct: 1   MKLAGLKSVENAHEESVWAVTWVPATDNRPSLLLTGSLDETVKLWKSDELDLERTNTGHC 60

Query: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVA 120
           LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFN EGTMLAVA
Sbjct: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120

Query: 121 GGGSASIKLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIKLWDT+TWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWS+DGRRLACGSMDG
Sbjct: 121 GGGSASIKLWDTNTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSIDGRRLACGSMDG 180

Query: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS
Sbjct: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAG 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGG G
Sbjct: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGVG 300

Query: 301 VRAGRLASVSDDKSISLYDYS 322
           VR+GRLASVSDDKSISLYDYS
Sbjct: 301 VRSGRLASVSDDKSISLYDYS 321

[Close]

BLAST of MS023110 vs. ExPASy TrEMBL
Match: A0A1S3BQZ8 (WD repeat-containing protein VIP3 OS=Cucumis melo OX=3656 GN=LOC103492347 PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 3.3e-178
Identity = 311/321 (96.88%), Postives = 317/321 (98.75%), Query Frame = 0


Query: 1   MKLAGLKSVENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWKPDELELERTNTGHC 60
           MKLAGLKSVENAH+ESVWA TWVPATDNRPS+LLTGSLDETVKLWK DEL+LERTNTGHC
Sbjct: 1   MKLAGLKSVENAHEESVWAVTWVPATDNRPSLLLTGSLDETVKLWKSDELDLERTNTGHC 60

Query: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVA 120
           LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFN EGTMLAVA
Sbjct: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120

Query: 121 GGGSASIKLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIKLWDT+TWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWS+DGRRLACGSMDG
Sbjct: 121 GGGSASIKLWDTNTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSIDGRRLACGSMDG 180

Query: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS
Sbjct: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAG 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGG G
Sbjct: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGVG 300

Query: 301 VRAGRLASVSDDKSISLYDYS 322
           VR+GRLASVSDDKSISLYDYS
Sbjct: 301 VRSGRLASVSDDKSISLYDYS 321

[Close]

BLAST of MS023110 vs. ExPASy TrEMBL
Match: A0A0A0LWK2 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G590260 PE=4 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 7.4e-178
Identity = 310/321 (96.57%), Postives = 317/321 (98.75%), Query Frame = 0


Query: 1   MKLAGLKSVENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWKPDELELERTNTGHC 60
           MKLAGLKSVENAH+ESVWAATWVPATD RPS+LLTGSLDETVKLWK DEL+LERTNTGHC
Sbjct: 1   MKLAGLKSVENAHEESVWAATWVPATDTRPSLLLTGSLDETVKLWKSDELDLERTNTGHC 60

Query: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVA 120
           LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFN EGTMLAVA
Sbjct: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120

Query: 121 GGGSASIKLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIKLWDT+TWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWS+DGRRLACGSMDG
Sbjct: 121 GGGSASIKLWDTNTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSIDGRRLACGSMDG 180

Query: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TIS+FDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS
Sbjct: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAG 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGG G
Sbjct: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGVG 300

Query: 301 VRAGRLASVSDDKSISLYDYS 322
           VR+GRLASVSDDKSISLYDYS
Sbjct: 301 VRSGRLASVSDDKSISLYDYS 321

[Close]

BLAST of MS023110 vs. ExPASy TrEMBL
Match: A0A6J1JBB4 (WD repeat-containing protein VIP3 OS=Cucurbita maxima OX=3661 GN=LOC111485231 PE=4 SV=1)

HSP 1 Score: 626.7 bits (1615), Expect = 5.3e-176
Identity = 307/321 (95.64%), Postives = 318/321 (99.07%), Query Frame = 0


Query: 1   MKLAGLKSVENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWKPDELELERTNTGHC 60
           MKLAGLKSVENAH+ESVWAATW+PATDNRPS+L+TGSLDETVKLWK DEL+L+RTNTGHC
Sbjct: 1   MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC 60

Query: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVA 120
           LGVVSVAAHPSG+IAASASLDSFVR+FEVDSNSTIATLEAPPSEVWQMRFN EGTMLAVA
Sbjct: 61  LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120

Query: 121 GGGSASIKLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIK+WDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG
Sbjct: 121 GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180

Query: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TIS+FDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS
Sbjct: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAG 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPP GAG
Sbjct: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPP-GAG 300

Query: 301 VRAGRLASVSDDKSISLYDYS 322
           VR+GRLASVSDDKSISLYDYS
Sbjct: 301 VRSGRLASVSDDKSISLYDYS 320

[Close]

BLAST of MS023110 vs. TAIR 10
Match: AT4G29830.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 542.0 bits (1395), Expect = 3.3e-154
Identity = 253/321 (78.82%), Postives = 297/321 (92.52%), Query Frame = 0


Query: 1   MKLAGLKSVENAHDESVWAATWVPATDNRPSVLLTGSLDETVKLWKPDELELERTNTGHC 60
           MKLAGLKS+ENAH++SVWAATWVPAT++RP++LLTGSLDETVKLW+PDEL+L RTNTGH 
Sbjct: 1   MKLAGLKSIENAHEDSVWAATWVPATEDRPALLLTGSLDETVKLWRPDELDLVRTNTGHS 60

Query: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVA 120
           LGV ++AAHPSG IAAS+S+DSFVRVF+VD+N+TIA LEAPPSEVW M+F  +GT+LAVA
Sbjct: 61  LGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVA 120

Query: 121 GGGSASIKLWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GG SAS+KLWDT++W+L +TLSIPRP+ PKP+DKT+SKKFVLSVAWS +G+RLACGSMDG
Sbjct: 121 GGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDG 180

Query: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TI +FDV R+K LH LEGH MPVRSLV+SPV+PR+LFS SDD HV+M+DAEGKTL+G+MS
Sbjct: 181 TICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAG 300
           GH+SWVLSVDASPDG A+ATGSSDRTVRLWDL MR A+QTM+NH+DQVW VAFRPPGG G
Sbjct: 241 GHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTG 300

Query: 301 VRAGRLASVSDDKSISLYDYS 322
           VRAGRLASVSDDKS+SLYDYS
Sbjct: 301 VRAGRLASVSDDKSVSLYDYS 321

[Close]

BLAST of MS023110 vs. TAIR 10
Match: AT2G41500.1 (WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related )

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-24
Identity = 77/258 (29.84%), Postives = 119/258 (46.12%), Query Frame = 0


Query: 13  HDESVWAATWVPATDNRPSVLLTGSLDETVKLWKPDELELERTNTGHCLGVVSVAAHPSG 72
           H E      + P  D     L T S D T KLWK D   L+ T  GH   +  VA HPSG
Sbjct: 297 HKERATDVVFSPVDD----CLATASADRTAKLWKTDGTLLQ-TFEGHLDRLARVAFHPSG 356

Query: 73  FIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVAGGGSASIKLWDT 132
               + S D   R++++++ + +   E     V+ + F  +G + A  G  S + ++WD 
Sbjct: 357 KYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLA-RVWDL 416

Query: 133 STWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDGTISIFDVARAKF 192
            T +                      K V SV +S +G  LA G  D    I+D+   K 
Sbjct: 417 RTGRSILVFQ-------------GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKS 476

Query: 193 LHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMSGHSSWVLSVDAS 252
           L+ +  H   V  + Y P E   L +AS D  V+++     +L+ +++GH S V S+D +
Sbjct: 477 LYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDIT 535

Query: 253 PDGAAVATGSSDRTVRLW 271
            D + +AT S DRT++LW
Sbjct: 537 ADSSCIATVSHDRTIKLW 535

[Close]

BLAST of MS023110 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 7.9e-23
Identity = 68/240 (28.33%), Postives = 118/240 (49.17%), Query Frame = 0


Query: 33  LLTGSLDETVKLWKPDELELERTNTGHCLGVVSVAAHPSGFIAASASLDSFVRVFEVDSN 92
           +++ S D+T+KLW  +   L +T  GH      V  +P   +  S S D  VR+++V + 
Sbjct: 86  IVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTG 145

Query: 93  STIATLEAPPSEVWQMRFNSEGTMLAVAGGGSASIKLWDTSTWKLAATLSIPRPEGPKPT 152
             +  L A    V  + FN +G+++ V+       ++WD+ T     TL     E P   
Sbjct: 146 KCLKVLPAHSDPVTAVDFNRDGSLI-VSSSYDGLCRIWDSGTGHCVKTLI--DDENPP-- 205

Query: 153 DKTASKKFVLSVAWSVDGRRLACGSMDGTISIFDVARAKFLHHLEGHF--MPVRSLVYSP 212
                   V  V +S +G+ +  G++D T+ +++++ AKFL    GH       S  +S 
Sbjct: 206 --------VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSV 265

Query: 213 VEPRLLFSASDDAHVHMYDAEGKTLIGAMSGHSSWVLSVDASPDGAAVATGSSDRTVRLW 271
              + + S S+D  VHM++   K L+  + GH+  V++V   P    +A+GS D+TVR+W
Sbjct: 266 TNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312

[Close]

BLAST of MS023110 vs. TAIR 10
Match: AT5G67320.1 (WD-40 repeat family protein )

HSP 1 Score: 92.8 bits (229), Expect = 5.3e-19
Identity = 89/361 (24.65%), Postives = 153/361 (42.38%), Query Frame = 0


Query: 13  HDESVWAATWVPATDNRPSVLLTGSLDETVKLWKPDELELERTNTG---------HCLG- 72
           H   V A  W P+     S+L +GS D T ++W   E   +  +TG         H  G 
Sbjct: 264 HTSEVCACAWSPSA----SLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGK 323

Query: 73  -------VVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGT 132
                  V ++  +  G + A+ S D   R++ + +   I+TL      ++ +++N +G 
Sbjct: 324 SNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTL-NGELISTLSKHKGPIFSLKWNKKGD 383

Query: 133 MLAVAGGGSASIKLWDTST--WK------LAATLSIP-RPEGPKPTDKTAS--------- 192
            L + G    +  +WD     WK         TL +  R      T  T S         
Sbjct: 384 YL-LTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGE 443

Query: 193 ----KKF------VLSVAWSVDGRRLACGSMDGTISIFDVARAKFLHHLEGHFMPVRSLV 252
               K F      V  V W   G  LA  S D T  I+++ ++ F+H L  H   + ++ 
Sbjct: 444 TRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIR 503

Query: 253 YSPVEP--------RLLFSASDDAHVHMYDAEGKTLIGAMSGHSSWVLSVDASPDGAAVA 312
           +SP  P          L SAS D+ V ++DAE   ++ + +GH   V S+  SP+G  +A
Sbjct: 504 WSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIA 563

Query: 313 TGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGAGVRAGRLASVSDDKSISLYD 321
           +GS D+++ +W +     V+T T +   ++ V +   G       ++A+   D S+ + D
Sbjct: 564 SGSLDKSIHIWSIKEGKIVKTYTGNGG-IFEVCWNKEG------NKIAACFADNSVCVLD 611

[Close]

BLAST of MS023110 vs. TAIR 10
Match: AT5G23430.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 84.3 bits (207), Expect = 1.9e-16
Identity = 60/227 (26.43%), Postives = 103/227 (45.37%), Query Frame = 0


Query: 71  SGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNSEGTMLAVAGGGSASIKLW 130
           S  +  +   D  V ++ +   + I +L    S +  + F++   ++A AG  S +IKLW
Sbjct: 28  SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVA-AGAASGTIKLW 87

Query: 131 DTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDGTISIFDVARA 190
           D    K+  TL             T  +   +SV +   G   A GS+D  + I+D+ + 
Sbjct: 88  DLEEAKIVRTL-------------TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 147

Query: 191 KFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMSGHSSWVLSVD 250
             +H  +GH   V  L ++P + R + S  +D  V ++D     L+     H   + S+D
Sbjct: 148 GCIHTYKGHTRGVNVLRFTP-DGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLD 207

Query: 251 ASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPG 298
             P    +ATGS+DRTV+ WDL     + +    +  V  ++F P G
Sbjct: 208 FHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDG 239

The following BLAST results are available for this feature:

BLAST of MS023110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147613.1	2.7e-182	100.00	WD repeat-containing protein VIP3 [Momordica charantia]	[more]
XP_038878969.1	6.9e-178	96.57	WD repeat-containing protein VIP3 [Benincasa hispida]	[more]
XP_008450896.1	6.9e-178	96.88	PREDICTED: WD repeat-containing protein VIP3 [Cucumis melo] >KAA0055801.1 WD rep...	[more]
KAE8653439.1	1.5e-177	96.57	hypothetical protein Csa_006892 [Cucumis sativus]	[more]
XP_004144016.1	1.5e-177	96.57	WD repeat-containing protein VIP3 [Cucumis sativus]	[more]

BLAST of MS023110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZQ5	4.7e-153	78.82	WD repeat-containing protein VIP3 OS=Arabidopsis thaliana OX=3702 GN=VIP3 PE=1 S...	[more]
Q6PBD6	1.3e-62	39.42	WD repeat-containing protein 61 OS=Xenopus tropicalis OX=8364 GN=wdr61 PE=2 SV=1	[more]
Q6P5M2	3.8e-62	38.78	WD repeat-containing protein 61 OS=Danio rerio OX=7955 GN=wdr61 PE=2 SV=1	[more]
Q5ZJH5	5.0e-62	39.42	WD repeat-containing protein 61 OS=Gallus gallus OX=9031 GN=WDR61 PE=2 SV=1	[more]
Q6GMD2	1.4e-61	39.10	WD repeat-containing protein 61 OS=Xenopus laevis OX=8355 GN=wdr61 PE=2 SV=1	[more]

BLAST of MS023110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D1S8	1.3e-182	100.00	WD repeat-containing protein VIP3 OS=Momordica charantia OX=3673 GN=LOC111016495...	[more]
A0A5D3CFF6	3.3e-178	96.88	WD repeat-containing protein VIP3 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BQZ8	3.3e-178	96.88	WD repeat-containing protein VIP3 OS=Cucumis melo OX=3656 GN=LOC103492347 PE=4 S...	[more]
A0A0A0LWK2	7.4e-178	96.57	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G...	[more]
A0A6J1JBB4	5.3e-176	95.64	WD repeat-containing protein VIP3 OS=Cucurbita maxima OX=3661 GN=LOC111485231 PE...	[more]

BLAST of MS023110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29830.1	3.3e-154	78.82	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G41500.1	2.5e-24	29.84	WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related	[more]
AT3G49660.1	7.9e-23	28.33	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G67320.1	5.3e-19	24.65	WD-40 repeat family protein	[more]
AT5G23430.1	1.9e-16	26.43	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 33..47 score: 36.48 coord: 173..187 score: 34.0 coord: 258..272 score: 40.05
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 189..229 e-value: 4.0E-5 score: 33.0 coord: 232..271 e-value: 2.7E-9 score: 46.9 coord: 49..88 e-value: 0.002 score: 27.4 coord: 2..46 e-value: 0.16 score: 21.0 coord: 134..186 e-value: 1.7E-4 score: 31.0 coord: 91..131 e-value: 9.8E-4 score: 28.4 coord: 274..319 e-value: 1.8E-4 score: 30.9
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 237..271 e-value: 7.7E-8 score: 32.9
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 154..195 score: 9.004632
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 239..280 score: 17.392599
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 56..97 score: 9.639578
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 10..55 score: 9.672996
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 196..238 score: 8.770704
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 5..321 e-value: 4.3E-85 score: 287.2
IPR024977	Anaphase-promoting complex subunit 4, WD40 domain	PFAM	PF12894	ANAPC4_WD40	coord: 154..197 e-value: 6.3E-6 score: 26.4
None	No IPR available	PANTHER	PTHR44090:SF3	WD REPEAT-CONTAINING PROTEIN VIP3-LIKE	coord: 1..321
None	No IPR available	PANTHER	PTHR44090	WD REPEAT-CONTAINING PROTEIN 61	coord: 1..321
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 239..273 score: 13.501034
None	No IPR available	CDD	cd00200	WD40	coord: 6..319 e-value: 8.23752E-61 score: 194.091
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 258..272
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 10..320

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023110.1	MS023110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding