MS023104 (gene) Bitter gourd (TR) v1

Overview


Name	MS023104
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	THO complex subunit 6
Location	scaffold78: 145848 .. 153522 (-)
RNA-Seq Expression	MS023104
Synteny	MS023104

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGCGGACGCGACGAATTGGGACGAATATGCCTATAGAGAGAGTATTTTCAAGGAGAGAGAGGTGCAAACTCGGACTGTGTTCAGAACTGCATGGGCTCCCTCTTTAAATGGTGGTCCCGAGACAATCGTGGTCGCCTCCAGTGATGGATCCATTGCCTCTTATTCTATCGCTTCCTGCATCTCTAAGCTGGTAATTTTCTAAATTATTTTTAATCTTATGCTCATTTTTATTTTCTACCCGTATTTGAACGGTGTGGAATGTTTAAGGAGGTTCTTCGAGTGCTTCTTTGTCCAGATTATTTGGAAGATGTATTTTCTTTTATTTTTTGTTGGATAAGAAACTAATTTCACTGAATAAATTAGATTACAAGAGGGAGGGGAGGAAAAATTGAAGTTTGAAGCCAAGGAAGATTTTAAGAGTTCTTCTAAATGGCAGGAAGAGAGCTTAAATGATAATTACGGAAATAATCACAAAACTTGAATCAAGTAGGAGCAAGAATGATATTGTCCAAAAAAACAGTCAAAAGACTTTTCAAGGTGGCTCAAGAGACTATTACAACCTTAAACAGGATATGTTCTATAGATTGTACCTCTGTGTCGTTGGGTTCTAAAGTGGCTAAACAGACTATTGTTTCTCCTAATCCACAAATGCACAAAAATGCTATAGCTAGCTGCAACCAAAGGATCTTATTCCTCTTAAAAGGATGAGCATCGAGAGTGAGAGAGAGGAGGTCCTTCGTAGGACATTGAGAACCTTTGGAAGAGTGGATATAGGACGTACCCAACTAATGGACATCCAAAGAGACATCGGACTTACCATAATGAAGTTCCTCCAAAGAGCTTCTCTGGGTAGTTGGATTTGACTTTGAAAGGTTCATTATTTTTTCTTATTCATTGCTTCATAGTTGTTACTTGTGCTCAATGTAGATATTCACGATGTTATAAAGGTCGATCAAATTGTTAAGGAATTAGGATTATAGGATTCAAATTCTTTCCATTTCCAAATTGAAACTTAGTTTTAATGGTTTATTTTATGATCGCCCAAGTCCATCTCAAAATTTTATCACGAGCTGCCCAGTACTTATCACTTCTTACAATTGATTGATTCAAATGATATTTAATTAATGAAGCAAAAGAAGTTAATTTTTGTGTATTTGCTGTTCAGTACTTACCATCTTACGAGGTTTATTTTATGATCACTGAAAAGTTCCTCTTTCTTCTTGATTAGTAATTTAGTAGTTCTGGACTAGGTATGTCGTGTGTTGTATTTCTTTATATTTTAGTACTTCAAACTCCTATCCTGATTACACCTCTTTTTCATGCCTGTTTCAGCATTTTGGTTACAGCAATGCTAAAAGGCAAGTCCATTTGATCGTTTGTTCTCAATTCATTTCTAAATTTCGTGCTGCAAACTTGTACTTATGGTTCACTTTGTGCCTTACTCTAGTTTTCTGGCAGCAGAGCCTCATTGCTTCCTTCAAGGGCATGATGGGCCTGCATATGATGTCAAATTTTACGATAGTGGCGACAATACTTTATTACTGAGGTTTCTCTCTCTCTCTCTCAATACTACAATAGTTTGAAGACGTTACACTTGTTAGATGATTTCTTTTCTCTTTCATTTCTTGACAATTTTTTTATTGTTCCATATTCTTGTGAGATATTGGCTATTTTTCAGTTATCTCGATGCTGATTCTAATGTTAATTTAAATATGAATGAATGTGTATACTTATTAATTAACTAACTTAATAATGAGGCAACATTATAGTTTGGTGTAGAATTAGTTTAGTGTTATCTTCAGAAATTTAGAACCAGTTGGAGCATAATACAGTTGAGACCGATTGGTTGTATTGTGCTCTACACTGTTCAACTAAGTTTAAGTTCCGGTTGATTTTCTTGCAAAATGCAAGAACATGCCAAGTTCGACCATTCTGCTTAGTAGTTCTTTTGTTGGTGACCCATCATGACTATGTCTCTAGATGATGAATCCATTAGGTACTTGTTGGATCTTTAATACATAAATTGCCTAAAGTCTGTACCCATATTTTTCTTAAATTTATTTGACTTGTACTTGTTTGAGCTTCAACGACTCCCTAAATGCTTTGATTAAATAATAAAATTATACCTACAGCATGTAAACTTAAACGGCAAGTTGGACGGAAAACTTGCACTGGTCTTGATTAAAATATCTGATTAGCCGTGCACAACATTTATAGCTGTGGGGACGATGGTCACATTCGAGGATGGAGGTGGAGAGAATGTACTGATATAGAGATGCCTATTTATTTCAAAGGTAATAGTTTATCGTCTCTTATCTGTAGTTTTATAGGTTTCGTGACCCCTTGAGCAGGGGCTGCATTTTATTTTATAGGTTTCTTTGGCTGTTTGGAAATTCTATTTTCTTGTTGTTTTCTCACTCCTTTAAAATTTAGGTTTTGACTTGGTGTATTGTTTTAATTGCTATAGTTGCTATAATTTCTTCTTTTCTTTCTTTTTATTCCAGGTAGTCATATTGAGCCTGTCATGGACCTGACGAATCCTCAATACAAGTAGGTTAATCACAAATATTTGATATTTTTTCCTTAATTTTTCTTAGTATTCTTATTCAACCTGTAGTTGACCTGGTGGATTCTCAAAATGAGCTGGTTGCCAAAAAATATATACACTCTACTATGTGCATTTATTCAATTTAATATCCCGTTCATAATATTATACAAAAAGGAGAACACTGGTTTGCCTTGCTTTTATGGTTTCCTAATATTATTTTTTTAATTATTAATTTTTTTTATGAATAAAAAACAAACGTTAATACTTGATTTATGCATCTGGAACCTTCCATTTCGAAGATCAATCTCAATTCTCAAGCATTGTCCTTTTGACTTCTTAATTAGAACTTTATGTAATCATCTAGATTCTTAATACAGCAGCCACGCTTGGAAGATGGTTAACATATAATGCAGAGATGCTTTTATTATTTTCTATAGATTTTATGACTTATGTTTCACCTAATTTAATATAGACTTTACGATGTAACTTTATACTTGACTTATCTCATATTTATAAAAAAAGTAGACTATAGAATAGATATGGATTTATTTTTTCTTAGTGCACTTGATCATCTTTATTACTCATTCTTTTTAAATGTATCTTATTGCTGTCTTCTAGAGGTCCTTGGGGTGCTCTTTCTCCAATCCCCGAAAATAATGCAATTGCTACTGATGCCCAGGTTAATGGATCTGTTATTTTCCCCACTTACTCTATGACGCTGATGTTGCCAATTTAGTCCTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGAGAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAGATGAGGTGATATCTTGTTTTATTTTACAGGGTGGATCCATTTTTTCTGCTGCTGGAGATTCTTGTGCGTATTGTTGGGATCTGGTATGTGTATTTTGAGGTGGATGAGTGTAATTAATTGTAAACTTTCCAATCGGATTTTTTACAGCGAATAATTAAGTTCTTCCTAAAACTTACATAGTTTCTGCCTTTTGTATTTAAAATTTTCAGGAGAGCTGTAAAATTAAAATGGTTTTTAAGGGGCACTCTGATTACTTGCATTGTATAGTTGCCCGGAACACTGTCAACCAAGTACGTCTTTCCTTCTTTTCCTTGGTTATAATAGATTTCGATCTCCATTTCTACCTCGACCCTCTTTGAATTCTGTTTAGACTGCATAGTTTGTTCTTTTGTCTTCAGTGCGGTCGTCCTCCAGGCAGGTAAACTAGTAATGAATAGGAAAGGAGTGTTACTTCAAGGGTGTACACTGGCACAGATAAATGGGAATAGGAAACCTAGTAGATGCATATCCTTAGTTACTTCATCGACATGAGACACAAACACAAAGCACAACAAATAAAGTGACTCAATAAAAATTACAAGCACCCTTTTCACATGGTAGATATGCATATTGATATCCCCTCGCAACCCTCTGTTGCTGTGGGTGGGGGCACACGCTGGCCTCCTGTGCGCACCGTCGCACGGATGGCTTAAATTTGTGTCCTCGGCGCCGACAGGCGACATGCTACGGCAAAGAGAACTTCCTACTCTCCTCAGAAACTAACTTCTCCCCCCAACACGCACACACCCCACTATCCTTCACAACCTGAGTCTTAAGTAATTTGACTCACCACATAGTTGCTGGAAGATGTGTCTTCTAACTAACTTCTATGGCATCTCCCCATCATCTCATTTACTGCCTCCAGCCTCGATTTCCTCATTCTTGTAAGTGCATGAATTGTGAATCTGTTACTCTGTCAACGACTTTTATCTTTAATTAATAGTTGGTATGCAGTTAGTAGAGTATGGGATTCTCCTGAGCATCAGTGTAAAGCATGAAATTCTTGAGATTTAGTGAAATTGTTTGCCTAATACTCTCTCCATGTTCTGCCACCAAGCATTAGTATTATACCGATTAGGTGCTACTAATGAAGTCCTGCAGCCAAAAGGGAAGACACTAATTTTTATTTTTTTTTGTCTGTCCAATTCTTCAAAAAATTAATTATTATGGCTTCATTTGGTAAAGCTTTTGGCTTTAGACTTTAGTTTTATGTTTCGAAACATGTGACCATCATTAGCTTTCTGAACTATACTTTTCATGTACTTCCACCTTATTGTTTTCACACCTTGAATTTCAGATCATAACTGGTTCAGAAGATGGTACAGCACGAATATGGGGTATGTAAATTATTTATTTATAATATATATGTCTAAAGCAGAAGGCCATGCATCAACTTCAATCATTTCCTACCTGCACTTGTAGCATATTTAATGCTAAATTCTATTTTAAAAATCGTAAAGTTGTTGAGCAGGAACATAGTTTATTATAGACTATAGTGGTTAAAACTTCTCAAAGAGACCACGGGTTCGAATTCTCTTTGACTATCTGTCTGTCAATCTGCTTATAGTCTCTACTTTCTTAGCAGTAAATTTTGGTTGGGAGATTTTTTGGTATAAATATATGAATTTTAAGGTATCTTATACGTGTTTATACTATCAAACCAGATTGCAAGAGTGGAAAGTGCATCCAAGTAATTGACCCAGCGAAGGATAAGAAGCTGAAAGGGCACTTCTCATGTATTAGATGCATTGCTCTTGATGCAAGTGAAAGCTGGTTGGTGAGTATTTACTTAATTATCAGTATATTCCTCCATGGTGATTTGGATTTGAGTTTTTCTGCAGCTGTGCTCTTATTTTGTTATTTGGCCTGTTTTCTATTCTTCATCATTCTTAAAAAAAGCTATTTTTCTTCTTTTTTTTTTAATAATTGGAAAAGCTTTTTTTCTTCTTGAAGGAAAATATTTGGTAATGGCTCTATATTACTTTGTTGTTTGGATCCACCTCTGGATTCCAAAAATCCTACTTATTCAGATTTCCTTCTGTTAATCCTCCCACTTTAGCTGACTTATTCTCCATACTAATCTTCAAACCAGAGACCATCTCAAGCAAATTCGGCACTTTCAACTATATATTGGGTTATAGGAGAGGAACTTTCTGTCCCCATTTTAACTTTCTTTACTTATTTTACTTAAAAATTTGAAATCTAATTTAGTACTTTTTTTTGTTCATCTATTTTTTTCCCTTCAATTAAATAAATGTAGGTTTTAAAGAATATTCAAAATGGTACAATATAATATAAATGTTGTATTTTTCATTTTACTATTTTTTTGTATGGTTCCATTTTGTCTTTTATTTTTTTAGAATAGAAAGATCATTTTTTTCCTTGGGACTATAATATACTAATTAATAAACCTGATTTTCCAATAAAATTTTTTAATGTTGTAAACAAGTAATACTAATCATCCATAACTAAAAAATCTTTGTTTTCAGTCAAATCATTTATATACAATACTCATAAAAAACCAATTTATTAATGGGGTGATAAAAACTATGTCAGATTTATCATTCCGATACTCTAACAATTAAGTAGATAATTTTATTAATCAGTATATATTTAATACATAATATTCATAATGATACCAGGAATGCTCCAGGGCGTCCCAAGATATGTTTTCAGTTATTGCTATACAATTACAACCCGTCTTTGCTCAATTGATACAAAACACACATGCTTTAGCACCTAGTATAACGGCCCCCGGTGTAACAACAAGCACCCGTTTGACTTGGGGGTGGTGATTTAGTGGCAGTGGGTGGCAAAGTTGCTCTGTTACCCCTATTCATTAGGAACCACAGATTTTTTGGTATATCATATTCATGCATTTATGATTCATGTGACGGTATTGATACTCTTTAAAGGTGTTCTATTTTCTTGTAGCTCGCGTTTGATACTGGATAAAATAAATCTTAGTTTTCGTTTCCCTCGTGATAAATAAATATAAAATTAAATTATAAACTAATTTCATTTATATAGTTTGGTGACATTAATTTGAACTCATTAATAAAATTTATTTTCTTATAGCAAAATACAACTAGAACTTTACATGCATGGTCCGTGTTATGGACTAGTAGATGAAAAAATCATAGGTGAAAGGTTGACTAGGTTTCATTCCTGAGAATATTTCTCTTGCTGAATTGATGGGTATAATGGAGTGATATTTACATCTGCTGCATTTTATTTTAGGCCTGTGCTGACGGTCGGAGTTTATCAGTTTGGAACCTTCCGTCTTCTGAATTCATTTCGAAAACTTTGACCCGTTCTTCAATGCAGGATATGGCTTTTTGTGATAATCAAGTGAGTGATTCTCCTTCTTGAACTGGTTATACTTTTAATTAAGTGACACTAGCCTGCATTTTGGTCTTGCTCAGGAATCTGTCATCATGTTTTCATCTTTCATTTGATCATTAGACAAGAAATATAAGATTTCCTACTTGCTTTTATGATTTAGCGCAACAGCAAACTCATTTTTGCATAATTATTGTTGACTTACAAGTTAAAGAAGCATGCACATGACCGTTATACGACATGAGCCTGAGAGAAGTTATCTAAGAGCACGAATATGTCAAATATTGTTATCTTAGTATATCTTGTGTTAGATCAGATTATTCTGACACCATTGTATGTTACTGTTGTCTCTCCGTGTCCAGATATTAGGCGTTGGAGCAGAGCCATCACTAACCCGGTTCGACGTAAATGGATCAATTCTTTCACAAATACAATGTGCCCCTCAGTCAGCTTTTTCAGTTGCCTTGCATCCATCTGGCGTATGTTTAACTTGATTCCTTTTGTCCTCTGGAACTTCTTCATTTCTCTCAATTTTAGCGTAACATTATGGGAAGATTAGAACTTAGAAGAGCAACTAAAATGGTGTTCCATTTTGTTTTTATGCATATCCGTGTAATCTCATTCATTATATAGTCTACTACCAAATGAGCAACAAATTCAATCATGTTATCTGTTGCTATTTCGACCTTTCATTTTCCTTGGACTTTCATCCAAGCCTTAAATTGAAGTCCTAAGAGATAACTTGTCAATGATATGCTATGAATTCAAGGATCTTGCTTAGGTTATCTTTCCTCTATGCTTCTCTCACTCTAGGATGGTTTATTTGTCGGTTCAGGTCGCAGCAGTCGGAGGCTATGGTGGTCTCGTGGACGTTATCTCACAGTTCGGAAGTCATTTATGCACATTCCGGTGTCAATACAGA

mRNA sequence

ATGTCAGCGGACGCGACGAATTGGGACGAATATGCCTATAGAGAGAGTATTTTCAAGGAGAGAGAGGTGCAAACTCGGACTGTGTTCAGAACTGCATGGGCTCCCTCTTTAAATGGTGGTCCCGAGACAATCGTGGTCGCCTCCAGTGATGGATCCATTGCCTCTTATTCTATCGCTTCCTGCATCTCTAAGCTGCATTTTGGTTACAGCAATGCTAAAAGGCAAGTCCATTTGATCGTTTGTTCTCAATTCATTTCTAAATTTTGCAAACTTGTACTTATGGTTCACTTTGTGCCTTACTCTAGTTTTCTGGCAGCAGAGCCTCATTGCTTCCTTCAAGGGCATGATGGGCCTGCATATGATGTCAAATTTTACGATAGTGGCGACAATACTTTATTACTGAGCTGTGGGGACGATGGTCACATTCGAGGATGGAGGTGGAGAGAATGTACTGATATAGAGATGCCTATTTATTTCAAAGGTAGTCATATTGAGCCTGTCATGGACCTGACGAATCCTCAATACAAAGGTCCTTGGGGTGCTCTTTCTCCAATCCCCGAAAATAATGCAATTGCTACTGATGCCCAGGAGAGCTGTAAAATTAAAATGGTTTTTAAGGGGCACTCTGATTACTTGCATTGTATAGTTGCCCGGAACACTGTCAACCAAATCATAACTGGTTCAGAAGATGGTACAGCACGAATATGGGATTGCAAGAGTGGAAAGTGCATCCAAGTAATTGACCCAGCGAAGGATAAGAAGCTGAAAGGGCACTTCTCATGTATTAGATGCATTGCTCTTGATGCAAGTGAAAGCTGGTTGGCCTGTGCTGACGGTCGGAGTTTATCAGTTTGGAACCTTCCGTCTTCTGAATTCATTTCGAAAACTTTGACCCGTTCTTCAATGCAGGATATGGCTTTTTGTGATAATCAAATATTAGGCGTTGGAGCAGAGCCATCACTAACCCGGTTCGACGTAAATGGATCAATTCTTTCACAAATACAATGTGCCCCTCAGTCAGCTTTTTCAGTTGCCTTGCATCCATCTGGCGTCGCAGCAGTCGGAGGCTATGGTGGTCTCGTGGACGTTATCTCACAGTTCGGAAGTCATTTATGCACATTCCGGTGTCAATACAGA

Coding sequence (CDS)

ATGTCAGCGGACGCGACGAATTGGGACGAATATGCCTATAGAGAGAGTATTTTCAAGGAGAGAGAGGTGCAAACTCGGACTGTGTTCAGAACTGCATGGGCTCCCTCTTTAAATGGTGGTCCCGAGACAATCGTGGTCGCCTCCAGTGATGGATCCATTGCCTCTTATTCTATCGCTTCCTGCATCTCTAAGCTGCATTTTGGTTACAGCAATGCTAAAAGGCAAGTCCATTTGATCGTTTGTTCTCAATTCATTTCTAAATTTTGCAAACTTGTACTTATGGTTCACTTTGTGCCTTACTCTAGTTTTCTGGCAGCAGAGCCTCATTGCTTCCTTCAAGGGCATGATGGGCCTGCATATGATGTCAAATTTTACGATAGTGGCGACAATACTTTATTACTGAGCTGTGGGGACGATGGTCACATTCGAGGATGGAGGTGGAGAGAATGTACTGATATAGAGATGCCTATTTATTTCAAAGGTAGTCATATTGAGCCTGTCATGGACCTGACGAATCCTCAATACAAAGGTCCTTGGGGTGCTCTTTCTCCAATCCCCGAAAATAATGCAATTGCTACTGATGCCCAGGAGAGCTGTAAAATTAAAATGGTTTTTAAGGGGCACTCTGATTACTTGCATTGTATAGTTGCCCGGAACACTGTCAACCAAATCATAACTGGTTCAGAAGATGGTACAGCACGAATATGGGATTGCAAGAGTGGAAAGTGCATCCAAGTAATTGACCCAGCGAAGGATAAGAAGCTGAAAGGGCACTTCTCATGTATTAGATGCATTGCTCTTGATGCAAGTGAAAGCTGGTTGGCCTGTGCTGACGGTCGGAGTTTATCAGTTTGGAACCTTCCGTCTTCTGAATTCATTTCGAAAACTTTGACCCGTTCTTCAATGCAGGATATGGCTTTTTGTGATAATCAAATATTAGGCGTTGGAGCAGAGCCATCACTAACCCGGTTCGACGTAAATGGATCAATTCTTTCACAAATACAATGTGCCCCTCAGTCAGCTTTTTCAGTTGCCTTGCATCCATCTGGCGTCGCAGCAGTCGGAGGCTATGGTGGTCTCGTGGACGTTATCTCACAGTTCGGAAGTCATTTATGCACATTCCGGTGTCAATACAGA

Protein sequence

MSADATNWDEYAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIASCISKLHFGYSNAKRQVHLIVCSQFISKFCKLVLMVHFVPYSSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFKGSHIEPVMDLTNPQYKGPWGALSPIPENNAIATDAQESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFSCIRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFCDNQILGVGAEPSLTRFDVNGSILSQIQCAPQSAFSVALHPSGVAAVGGYGGLVDVISQFGSHLCTFRCQYR

Homology

[Close]

BLAST of MS023104 vs. NCBI nr
Match: XP_022147721.1 (THO complex subunit 6 [Momordica charantia])

HSP 1 Score: 706.8 bits (1823), Expect = 9.9e-200
Identity = 348/397 (87.66%), Postives = 350/397 (88.16%), Query Frame = 0


Query: 1   MSADATNWDEYAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           MSADATNWDE AYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS
Sbjct: 1   MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60

Query: 61  CISKLHFGYSNAKRQVHLIVCSQFISKFCKLVLMVHFVPYSSFLAAEPHCFLQGHDGPAY 120
           CISKLHFGYSNAK                            SFLAAEPHCFLQGHDGPAY
Sbjct: 61  CISKLHFGYSNAK----------------------------SFLAAEPHCFLQGHDGPAY 120

Query: 121 DVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFKGSHIEPVMDLTNPQYKGPWG 180
           DVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYF+GSHIEPVMDLTNPQYKGPWG
Sbjct: 121 DVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWG 180

Query: 181 ALSPIPENNAIATDAQ------------------ESCKIKMVFKGHSDYLHCIVARNTVN 240
           ALSPIPENNAIATDAQ                  ESCKIKMVFKGHSDYLHCIVARNTVN
Sbjct: 181 ALSPIPENNAIATDAQGGSIFSAAGDSCAYCWDLESCKIKMVFKGHSDYLHCIVARNTVN 240

Query: 241 QIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFSCIRCIALDASESWLACADGRSL 300
           QIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFSCIRCIALDASESWLACADGRSL
Sbjct: 241 QIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFSCIRCIALDASESWLACADGRSL 300

Query: 301 SVWNLPSSEFISKTLTRSSMQDMAFCDNQILGVGAEPSLTRFDVNGSILSQIQCAPQSAF 360
           SVWNLPSSEFISKTLTRSSMQDMAFCDNQILG+GAEPSLTRFDVNGSILSQIQCAPQSAF
Sbjct: 301 SVWNLPSSEFISKTLTRSSMQDMAFCDNQILGIGAEPSLTRFDVNGSILSQIQCAPQSAF 360

Query: 361 SVALHPSGVAAVGGYGGLVDVISQFGSHLCTFRCQYR 380
           SVALHPSGVAAVGGYGGLVDVISQFGSHLCTFRCQYR
Sbjct: 361 SVALHPSGVAAVGGYGGLVDVISQFGSHLCTFRCQYR 369

[Close]

BLAST of MS023104 vs. NCBI nr
Match: KAG6588052.1 (THO complex subunit 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 680.6 bits (1755), Expect = 7.6e-192
Identity = 330/399 (82.71%), Postives = 355/399 (88.97%), Query Frame = 0


Query: 1   MSADATNWDEYAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           M  DATNWDE AYRES++KEREVQTRTVFRTAWAPSL+G PE+IVVASSDGSIASYSIAS
Sbjct: 1   MLGDATNWDEDAYRESLYKEREVQTRTVFRTAWAPSLSGCPESIVVASSDGSIASYSIAS 60

Query: 61  CISKLHFGYSNAKRQVHLIVCSQFISKF-CKLVLMVHFVPYSSFLAAEPHCFLQGHDGPA 120
           CISKLH GY N KRQVH I+ S ++  + CKLVL+V+ VPYSS LAAEPHCFLQGHDGP 
Sbjct: 61  CISKLHSGYGNTKRQVHFILVSIYLKIWGCKLVLIVYVVPYSSLLAAEPHCFLQGHDGPT 120

Query: 121 YDVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFKGSHIEPVMDLTNPQYKGPW 180
           YDVKF+D+GDNTLLLSCGDDGHIRGWRW ECTDIE+PIY +GSHIEPVMDL NPQYKGPW
Sbjct: 121 YDVKFFDAGDNTLLLSCGDDGHIRGWRWNECTDIEVPIYLQGSHIEPVMDLMNPQYKGPW 180

Query: 181 GALSPIPENNAIATDAQ------------------ESCKIKMVFKGHSDYLHCIVARNTV 240
           GALSPIPENNAIAT+AQ                  ES KIKMVFKGHSDYLHCIVARNTV
Sbjct: 181 GALSPIPENNAIATNAQSGSIFSAAGDSCAYCWDLESSKIKMVFKGHSDYLHCIVARNTV 240

Query: 241 NQIITGSEDGTARIWDCKSGKCIQVIDPAKD-KKLKGHFSCIRCIALDASESWLACADGR 300
           NQIITGSEDGTARIWDCK+GKCIQVIDPAKD KK KG+FSC+RCIALDASESWLACADGR
Sbjct: 241 NQIITGSEDGTARIWDCKAGKCIQVIDPAKDNKKQKGNFSCVRCIALDASESWLACADGR 300

Query: 301 SLSVWNLPSSEFISKTLTRSSMQDMAFCDNQILGVGAEPSLTRFDVNGSILSQIQCAPQS 360
           S SVWNLP+S+FIS+TLTRSSMQDM FCDNQILGVGAEP LTRFD++GSILS+IQCAPQS
Sbjct: 301 SFSVWNLPASDFISRTLTRSSMQDMVFCDNQILGVGAEPLLTRFDIHGSILSEIQCAPQS 360

Query: 361 AFSVALHPSGVAAVGGYGGLVDVISQFGSHLCTFRCQYR 380
           AFSVA+HPSGVAAVGGYGGLVDVISQFGSHLCTF CQYR
Sbjct: 361 AFSVAVHPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 399

[Close]

BLAST of MS023104 vs. NCBI nr
Match: KAG7021946.1 (THO complex subunit 6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 679.1 bits (1751), Expect = 2.2e-191
Identity = 330/399 (82.71%), Postives = 354/399 (88.72%), Query Frame = 0


Query: 1   MSADATNWDEYAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           M  DATNWDE AYRES++KEREVQTRTVFRTAWAPSL+G PE+IVVASSDGSIASYSIAS
Sbjct: 1   MLGDATNWDEDAYRESLYKEREVQTRTVFRTAWAPSLSGCPESIVVASSDGSIASYSIAS 60

Query: 61  CISKLHFGYSNAKRQVHLIVCSQFISKF-CKLVLMVHFVPYSSFLAAEPHCFLQGHDGPA 120
           CISKLH GY N KRQVH I+ S +   + CKLVL+V+ VPYSS LAAEPHCFLQGHDGP 
Sbjct: 61  CISKLHSGYGNTKRQVHFILVSIYFKIWGCKLVLIVYVVPYSSLLAAEPHCFLQGHDGPT 120

Query: 121 YDVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFKGSHIEPVMDLTNPQYKGPW 180
           YDVKF+D+GDNTLLLSCGDDGHIRGWRW ECTDIE+PIY +GSHIEPVMDL NPQYKGPW
Sbjct: 121 YDVKFFDAGDNTLLLSCGDDGHIRGWRWNECTDIEVPIYLQGSHIEPVMDLMNPQYKGPW 180

Query: 181 GALSPIPENNAIATDAQ------------------ESCKIKMVFKGHSDYLHCIVARNTV 240
           GALSPIPENNAIAT+AQ                  ES KIKMVFKGHSDYLHCIVARNTV
Sbjct: 181 GALSPIPENNAIATNAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTV 240

Query: 241 NQIITGSEDGTARIWDCKSGKCIQVIDPAKD-KKLKGHFSCIRCIALDASESWLACADGR 300
           NQIITGSEDGTARIWDCK+GKCIQVIDPAKD KK KG+FSC+RCIALDASESWLACADGR
Sbjct: 241 NQIITGSEDGTARIWDCKAGKCIQVIDPAKDNKKQKGNFSCVRCIALDASESWLACADGR 300

Query: 301 SLSVWNLPSSEFISKTLTRSSMQDMAFCDNQILGVGAEPSLTRFDVNGSILSQIQCAPQS 360
           S SVWNLP+S+FIS+TLTRSSMQDM FCDNQILGVGAEP LTRFD++GSILS+IQCAPQS
Sbjct: 301 SFSVWNLPASDFISRTLTRSSMQDMVFCDNQILGVGAEPLLTRFDIHGSILSEIQCAPQS 360

Query: 361 AFSVALHPSGVAAVGGYGGLVDVISQFGSHLCTFRCQYR 380
           AFSVA+HPSGVAAVGGYGGLVDVISQFGSHLCTF CQYR
Sbjct: 361 AFSVAVHPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 399

[Close]

BLAST of MS023104 vs. NCBI nr
Match: XP_038880261.1 (THO complex subunit 6 isoform X4 [Benincasa hispida] >XP_038880262.1 THO complex subunit 6 isoform X4 [Benincasa hispida])

HSP 1 Score: 666.8 bits (1719), Expect = 1.1e-187
Identity = 326/397 (82.12%), Postives = 338/397 (85.14%), Query Frame = 0


Query: 1   MSADATNWDEYAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           M ADATNWDE AYRESI+KERE+QTRTVFRTAWAPSLNG PETIV ASSDGSIASYSIAS
Sbjct: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSIASYSIAS 60

Query: 61  CISKLHFGYSNAKRQVHLIVCSQFISKFCKLVLMVHFVPYSSFLAAEPHCFLQGHDGPAY 120
           CISKLHFGY N +                            S LAAEPHCFLQGHDGPAY
Sbjct: 61  CISKLHFGYGNTR----------------------------SLLAAEPHCFLQGHDGPAY 120

Query: 121 DVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFKGSHIEPVMDLTNPQYKGPWG 180
           DVKFYD+G+NTLLLSCGDDGHIRGWRWRECTDIE+PIY +GSHIEPVMDL NPQYKGPWG
Sbjct: 121 DVKFYDNGNNTLLLSCGDDGHIRGWRWRECTDIEVPIYLQGSHIEPVMDLMNPQYKGPWG 180

Query: 181 ALSPIPENNAIATDAQ------------------ESCKIKMVFKGHSDYLHCIVARNTVN 240
           ALSP+PENNAIA+DAQ                  ES KIKMVFKGHSDYLHCIVARNTVN
Sbjct: 181 ALSPMPENNAIASDAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTVN 240

Query: 241 QIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFSCIRCIALDASESWLACADGRSL 300
           QIITGSEDGTARIWDCKSGKCIQ+IDPAKDKKLKGHFSCIRCIALDASESWLACADGRSL
Sbjct: 241 QIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSCIRCIALDASESWLACADGRSL 300

Query: 301 SVWNLPSSEFISKTLTRSSMQDMAFCDNQILGVGAEPSLTRFDVNGSILSQIQCAPQSAF 360
           SVWNLPSSEFISKTLTRSSMQDM FCDNQILGVGAEP LTRFD+NGS+LSQIQCAPQSAF
Sbjct: 301 SVWNLPSSEFISKTLTRSSMQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAF 360

Query: 361 SVALHPSGVAAVGGYGGLVDVISQFGSHLCTFRCQYR 380
           SVALHPSGVAAVGGYGGLVDVISQFGSHLCTF CQYR
Sbjct: 361 SVALHPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 369

[Close]

BLAST of MS023104 vs. NCBI nr
Match: XP_008450878.1 (PREDICTED: THO complex subunit 6 [Cucumis melo] >KAA0055809.1 THO complex subunit 6 [Cucumis melo var. makuwa] >TYK10060.1 THO complex subunit 6 [Cucumis melo var. makuwa])

HSP 1 Score: 658.3 bits (1697), Expect = 4.0e-185
Identity = 320/397 (80.60%), Postives = 335/397 (84.38%), Query Frame = 0


Query: 1   MSADATNWDEYAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           M ADATNWDE AYRESI+KERE+QTRTVFRTAWAPSLNG PETIV ASSDGS+ASYSIAS
Sbjct: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60

Query: 61  CISKLHFGYSNAKRQVHLIVCSQFISKFCKLVLMVHFVPYSSFLAAEPHCFLQGHDGPAY 120
           CISKL FGY N K                            S LAAEPHCFLQGHDGP Y
Sbjct: 61  CISKLQFGYGNTK----------------------------SLLAAEPHCFLQGHDGPTY 120

Query: 121 DVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFKGSHIEPVMDLTNPQYKGPWG 180
           DVKFYD+GDNTLLLSCGDDGHIRGWRWR+CTDIE+PIY +GSHIEPVMDL NPQ+KGPWG
Sbjct: 121 DVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWG 180

Query: 181 ALSPIPENNAIATDAQ------------------ESCKIKMVFKGHSDYLHCIVARNTVN 240
           ALSPIPENNAIATDAQ                  ES K+KMVFKGHSDYLHCIVARNTVN
Sbjct: 181 ALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIVARNTVN 240

Query: 241 QIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFSCIRCIALDASESWLACADGRSL 300
           QIITGSEDGTARIWDCKSGKCIQ+IDPAKDKKLKGHFS +RCIALDASESWLACADGRSL
Sbjct: 241 QIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLACADGRSL 300

Query: 301 SVWNLPSSEFISKTLTRSSMQDMAFCDNQILGVGAEPSLTRFDVNGSILSQIQCAPQSAF 360
           SVWNLPSSEFISKTLTRSS+QDM FCDNQILGVGAEP LTRFD+NGS+LSQIQCAPQSAF
Sbjct: 301 SVWNLPSSEFISKTLTRSSLQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAF 360

Query: 361 SVALHPSGVAAVGGYGGLVDVISQFGSHLCTFRCQYR 380
           SVALHPSGVAAVGGYGGL+DVISQFGSHLCTF CQYR
Sbjct: 361 SVALHPSGVAAVGGYGGLIDVISQFGSHLCTFCCQYR 369

[Close]

BLAST of MS023104 vs. ExPASy Swiss-Prot
Match: Q8L4M1 (THO complex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=THO6 PE=1 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 7.8e-115
Identity = 206/395 (52.15%), Postives = 270/395 (68.35%), Query Frame = 0


Query: 1   MSADATNWDEYAYRESIFKEREVQTRTVFRTAWAPSLN-GGPETIVVASSDGSIASYSIA 60
           M  DATNW+E  YRESI KERE++TRTVFRTAWAP      P+  VVASSDG++A +S+ 
Sbjct: 1   MYGDATNWNEDEYRESILKEREIETRTVFRTAWAPPARISNPDAFVVASSDGTLAFHSLN 60

Query: 61  SCISK-LHFGYSNAKRQVHLIVCSQFISKFCKLVLMVHFVPYSSFLAAEPHCFLQGHDGP 120
           S +S+   FGYS  +                              + AEP   ++ H+GP
Sbjct: 61  SLVSQSASFGYSKGQ----------------------------DVMVAEPERVVRAHEGP 120

Query: 121 AYDVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFKGSHIEPVMDLTNPQYKGP 180
           AYDVKFY   ++ LLLSCGDDG +RGW+WRE  + ++ ++ K +H++P+++L NPQ+KGP
Sbjct: 121 AYDVKFYGEDEDALLLSCGDDGRVRGWKWREFAESDVSLHLKENHLKPLLELINPQHKGP 180

Query: 181 WGALSPIPENNAIATDAQ------------------ESCKIKMVFKGHSDYLHCIVARNT 240
           WGALSP+PE NA++ D Q                  ES KIKM FKGHSDYLH +V+R++
Sbjct: 181 WGALSPMPEINAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSS 240

Query: 241 VNQIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFSCIRCIALDASESWLACADGR 300
            +QI+TGSEDGTARIWDCK+GKC++VI  ++DKK +   S    +ALD SESWL C  G+
Sbjct: 241 ASQILTGSEDGTARIWDCKTGKCVKVIG-SQDKKSRLRVS---SMALDGSESWLVCGQGK 300

Query: 301 SLSVWNLPSSEFISKTLTRSSMQDMAFCDNQILGVGAEPSLTRFDVNGSILSQIQCAPQS 360
           +L++WNLP+SE +      + +QD+ F + QIL VGAEP L RFD+NG++LSQI CAP S
Sbjct: 301 NLALWNLPASECVQTIPIPAHVQDVMFDEKQILTVGAEPLLRRFDLNGALLSQIHCAPCS 360

Query: 361 AFSVALHPSGVAAVGGYGGLVDVISQFGSHLCTFR 376
            FS++LHP+GV AVGGYGG+VDVISQFGSHLCTFR
Sbjct: 361 VFSISLHPAGVVAVGGYGGIVDVISQFGSHLCTFR 363

[Close]

BLAST of MS023104 vs. ExPASy Swiss-Prot
Match: Q5XJS5 (THO complex subunit 6 homolog OS=Danio rerio OX=7955 GN=thoc6 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.5e-22
Identity = 80/283 (28.27%), Postives = 128/283 (45.23%), Query Frame = 0


Query: 99  PYSSFLAAEPHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWRECTD------ 158
           P +S  + +P      HDGP + +   +S     LLS G +G I  W W E         
Sbjct: 43  PDASERSQKPILNFTAHDGPVFSLLSTESH----LLSAG-NGEISAWSWAELIKKSTKAA 102

Query: 159 -IEMPIYFKGSHIEPV-MDLTNPQYKGPWGALSPIPENNAIATDAQESCKIKMVFKGHSD 218
               P Y     I  +   + NP+       +    +NN    D  E+   K V KGH+D
Sbjct: 103 WTRKPNYETSLEIPEINAMIINPKDN---NLIVGGGDNNIHIMD-METGTFKSVLKGHTD 162

Query: 219 YLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQVIDPAK-DKKLKGHF-SCIRCIALD 278
           Y+HC+  +    +I++G EDG  RIWD ++ + +  I+  K ++  +  F   I C+A D
Sbjct: 163 YIHCLSFKEREGEILSGGEDGAVRIWDSRTNRPVHCIEVFKYEECARPQFGKWISCLATD 222

Query: 279 ASESWLACADGRSLSVWNLPSSEFISKTLTRSSMQDMAFCDNQILGVGAEPSLTRFDVNG 338
           +   W+ C  G SLS+W+L S    S        ++     + I+ VG  P ++     G
Sbjct: 223 S--DWMLCGGGPSLSLWHLRSMSPTSVFPLSGCQREAVSYQDLIMSVGEGPYVSHCLHGG 282

Query: 339 SILSQIQCAPQSAFSVALHPSG----VAAVGGYGGLVDVISQF 368
           ++ +QI C+P S  ++AL+       V  VGG    +DV + F
Sbjct: 283 TVKAQIPCSPSSLNTLALNLKNTEHRVMTVGGSSHQIDVFTNF 314

[Close]

BLAST of MS023104 vs. ExPASy Swiss-Prot
Match: Q86W42 (THO complex subunit 6 homolog OS=Homo sapiens OX=9606 GN=THOC6 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.0e-21
Identity = 83/334 (24.85%), Postives = 146/334 (43.71%), Query Frame = 0


Query: 72  AKRQVHLIVCSQFISKFCKLVL------MVHFVPYSSFLAAE-------PHCFLQGHDGP 131
           A +++H+ + SQ +S   K +        +     SS L++E       P    Q HDGP
Sbjct: 19  ALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSSALSSEAKEESKKPVVTFQAHDGP 78

Query: 132 AYDVKFYDSGDNTLLLSCGDDGHIRGWRWRE-----CTDI--EMPIYFKGSHIEPVMDLT 191
            Y +   D      LLS G DG ++ W W E     C ++    P Y     +  +    
Sbjct: 79  VYSMVSTDRH----LLSAG-DGEVKAWLWAEMLKKGCKELWRRQPPYRTSLEVPEI---- 138

Query: 192 NPQYKGPWGALSPIPENNAI---ATDAQ------ESCKIKMVFKGHSDYLHCIVARNTVN 251
                    AL  +P+ N++     D Q      E+     V +GH+DY+HC+  R    
Sbjct: 139 --------NALLLVPKENSLILAGGDCQLHTMDLETGTFTRVLRGHTDYIHCLALRERSP 198

Query: 252 QIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFS--CIRCIALDASESWLACADGR 311
           ++++G EDG  R+WD ++ K +Q I+  K ++     +   I C+A D+   W+ C  G 
Sbjct: 199 EVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECSRPHNGRWIGCLATDS--DWMVCGGGP 258

Query: 312 SLSVWNLPSSEFISKTLTRSSMQDMAFCDNQILGVGAEPSLTRFDVNGSILSQIQCAPQS 369
           +L++W+L SS   +    R+  + + F  + IL  G    + ++ ++G + +Q+  +   
Sbjct: 259 ALTLWHLRSSTPTTIFPIRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPG 318

[Close]

BLAST of MS023104 vs. ExPASy Swiss-Prot
Match: Q5U4D9 (THO complex subunit 6 homolog OS=Mus musculus OX=10090 GN=Thoc6 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.1e-20
Identity = 81/334 (24.25%), Postives = 143/334 (42.81%), Query Frame = 0


Query: 72  AKRQVHLIVCSQFISKFCKLVL------MVHFVPYSSFLAAE-------PHCFLQGHDGP 131
           A +++H+ + SQ +S   K +        +     S+ L++E       P      HDGP
Sbjct: 19  ALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSEAKEESKKPVVVFHAHDGP 78

Query: 132 AYDVKFYDSGDNTLLLSCGDDGHIRGWRWRE-----CTDI--EMPIYFKGSHIEPVMDLT 191
            Y +   D      LLS G DG ++GW W E     C ++    P Y     +  +    
Sbjct: 79  VYSMVSTDRH----LLSAG-DGEVKGWLWAEILKKGCKELWRRQPPYRTSLEVPEI---- 138

Query: 192 NPQYKGPWGALSPIPENNAI---ATDAQ------ESCKIKMVFKGHSDYLHCIVARNTVN 251
                    AL  +P+ N++     D Q      E+       +GH+DY+HC+  R    
Sbjct: 139 --------NALLLVPKENSLILAGGDCQLHSMDLETGAFTRALRGHTDYIHCLALRERSP 198

Query: 252 QIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFS--CIRCIALDASESWLACADGR 311
           ++++G EDG  R+WD +  K +Q I+  K ++     +   I C+A D+   W+ C  G 
Sbjct: 199 EVLSGGEDGAVRLWDLRIAKEVQTIEVYKHEECSRPHNGRWIGCLATDS--DWMVCGGGP 258

Query: 312 SLSVWNLPSSEFISKTLTRSSMQDMAFCDNQILGVGAEPSLTRFDVNGSILSQIQCAPQS 369
           +L++W+L SS   +    R+  + + F  + IL  G    +  + ++G + +Q+  +   
Sbjct: 259 ALTLWHLRSSTPTTVFPIRAPQKHVTFYQDLILSAGQGCCVNHWQLSGELKAQVPGSSPG 318

[Close]

BLAST of MS023104 vs. ExPASy Swiss-Prot
Match: Q6AY87 (THO complex subunit 6 homolog OS=Rattus norvegicus OX=10116 GN=Thoc6 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.1e-20
Identity = 81/334 (24.25%), Postives = 143/334 (42.81%), Query Frame = 0


Query: 72  AKRQVHLIVCSQFISKFCKLVL------MVHFVPYSSFLAAE-------PHCFLQGHDGP 131
           A +++H+ + SQ +S   K +        +     S+ L++E       P      HDGP
Sbjct: 19  ALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSEAKEESKKPMVTFHAHDGP 78

Query: 132 AYDVKFYDSGDNTLLLSCGDDGHIRGWRWRE-----CTDI--EMPIYFKGSHIEPVMDLT 191
            Y +   D      LLS G DG ++GW W E     C ++    P Y     +  +    
Sbjct: 79  VYSMVSTDRH----LLSAG-DGEVKGWLWAEILKKGCKELWRRQPPYRTSLEVPEI---- 138

Query: 192 NPQYKGPWGALSPIPENNAI---ATDAQ------ESCKIKMVFKGHSDYLHCIVARNTVN 251
                    AL  +P+ N++     D Q      E+       +GH+DY+HC+  R    
Sbjct: 139 --------NALLLVPKENSLILAGGDCQLHTMDLETGTFTRALRGHTDYIHCLALRERSP 198

Query: 252 QIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFS--CIRCIALDASESWLACADGR 311
           ++++G EDG  R+WD +  K +Q I+  K ++     +   I C+A D+   W+ C  G 
Sbjct: 199 EVLSGGEDGAVRLWDLRIAKEVQTIEVYKHEECSRPHNGRWIGCLATDS--DWMVCGGGP 258

Query: 312 SLSVWNLPSSEFISKTLTRSSMQDMAFCDNQILGVGAEPSLTRFDVNGSILSQIQCAPQS 369
           +L++W+L SS   +    R+  + + F  + IL  G    +  + ++G + +Q+  +   
Sbjct: 259 ALTLWHLRSSTPTTVFPIRAPQKHVTFYQDLILSAGQGCCVNHWQLSGELKAQVPGSSPG 318

[Close]

BLAST of MS023104 vs. ExPASy TrEMBL
Match: A0A6J1D376 (THO complex subunit 6 OS=Momordica charantia OX=3673 GN=LOC111016586 PE=3 SV=1)

HSP 1 Score: 706.8 bits (1823), Expect = 4.8e-200
Identity = 348/397 (87.66%), Postives = 350/397 (88.16%), Query Frame = 0


Query: 1   MSADATNWDEYAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           MSADATNWDE AYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS
Sbjct: 1   MSADATNWDEDAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60

Query: 61  CISKLHFGYSNAKRQVHLIVCSQFISKFCKLVLMVHFVPYSSFLAAEPHCFLQGHDGPAY 120
           CISKLHFGYSNAK                            SFLAAEPHCFLQGHDGPAY
Sbjct: 61  CISKLHFGYSNAK----------------------------SFLAAEPHCFLQGHDGPAY 120

Query: 121 DVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFKGSHIEPVMDLTNPQYKGPWG 180
           DVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYF+GSHIEPVMDLTNPQYKGPWG
Sbjct: 121 DVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFQGSHIEPVMDLTNPQYKGPWG 180

Query: 181 ALSPIPENNAIATDAQ------------------ESCKIKMVFKGHSDYLHCIVARNTVN 240
           ALSPIPENNAIATDAQ                  ESCKIKMVFKGHSDYLHCIVARNTVN
Sbjct: 181 ALSPIPENNAIATDAQGGSIFSAAGDSCAYCWDLESCKIKMVFKGHSDYLHCIVARNTVN 240

Query: 241 QIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFSCIRCIALDASESWLACADGRSL 300
           QIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFSCIRCIALDASESWLACADGRSL
Sbjct: 241 QIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFSCIRCIALDASESWLACADGRSL 300

Query: 301 SVWNLPSSEFISKTLTRSSMQDMAFCDNQILGVGAEPSLTRFDVNGSILSQIQCAPQSAF 360
           SVWNLPSSEFISKTLTRSSMQDMAFCDNQILG+GAEPSLTRFDVNGSILSQIQCAPQSAF
Sbjct: 301 SVWNLPSSEFISKTLTRSSMQDMAFCDNQILGIGAEPSLTRFDVNGSILSQIQCAPQSAF 360

Query: 361 SVALHPSGVAAVGGYGGLVDVISQFGSHLCTFRCQYR 380
           SVALHPSGVAAVGGYGGLVDVISQFGSHLCTFRCQYR
Sbjct: 361 SVALHPSGVAAVGGYGGLVDVISQFGSHLCTFRCQYR 369

[Close]

BLAST of MS023104 vs. ExPASy TrEMBL
Match: A0A5A7UQQ6 (THO complex subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001940 PE=3 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 1.9e-185
Identity = 320/397 (80.60%), Postives = 335/397 (84.38%), Query Frame = 0


Query: 1   MSADATNWDEYAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           M ADATNWDE AYRESI+KERE+QTRTVFRTAWAPSLNG PETIV ASSDGS+ASYSIAS
Sbjct: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60

Query: 61  CISKLHFGYSNAKRQVHLIVCSQFISKFCKLVLMVHFVPYSSFLAAEPHCFLQGHDGPAY 120
           CISKL FGY N K                            S LAAEPHCFLQGHDGP Y
Sbjct: 61  CISKLQFGYGNTK----------------------------SLLAAEPHCFLQGHDGPTY 120

Query: 121 DVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFKGSHIEPVMDLTNPQYKGPWG 180
           DVKFYD+GDNTLLLSCGDDGHIRGWRWR+CTDIE+PIY +GSHIEPVMDL NPQ+KGPWG
Sbjct: 121 DVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWG 180

Query: 181 ALSPIPENNAIATDAQ------------------ESCKIKMVFKGHSDYLHCIVARNTVN 240
           ALSPIPENNAIATDAQ                  ES K+KMVFKGHSDYLHCIVARNTVN
Sbjct: 181 ALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIVARNTVN 240

Query: 241 QIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFSCIRCIALDASESWLACADGRSL 300
           QIITGSEDGTARIWDCKSGKCIQ+IDPAKDKKLKGHFS +RCIALDASESWLACADGRSL
Sbjct: 241 QIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLACADGRSL 300

Query: 301 SVWNLPSSEFISKTLTRSSMQDMAFCDNQILGVGAEPSLTRFDVNGSILSQIQCAPQSAF 360
           SVWNLPSSEFISKTLTRSS+QDM FCDNQILGVGAEP LTRFD+NGS+LSQIQCAPQSAF
Sbjct: 301 SVWNLPSSEFISKTLTRSSLQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAF 360

Query: 361 SVALHPSGVAAVGGYGGLVDVISQFGSHLCTFRCQYR 380
           SVALHPSGVAAVGGYGGL+DVISQFGSHLCTF CQYR
Sbjct: 361 SVALHPSGVAAVGGYGGLIDVISQFGSHLCTFCCQYR 369

[Close]

BLAST of MS023104 vs. ExPASy TrEMBL
Match: A0A1S3BQ99 (THO complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103492340 PE=3 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 1.9e-185
Identity = 320/397 (80.60%), Postives = 335/397 (84.38%), Query Frame = 0


Query: 1   MSADATNWDEYAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           M ADATNWDE AYRESI+KERE+QTRTVFRTAWAPSLNG PETIV ASSDGS+ASYSIAS
Sbjct: 1   MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60

Query: 61  CISKLHFGYSNAKRQVHLIVCSQFISKFCKLVLMVHFVPYSSFLAAEPHCFLQGHDGPAY 120
           CISKL FGY N K                            S LAAEPHCFLQGHDGP Y
Sbjct: 61  CISKLQFGYGNTK----------------------------SLLAAEPHCFLQGHDGPTY 120

Query: 121 DVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFKGSHIEPVMDLTNPQYKGPWG 180
           DVKFYD+GDNTLLLSCGDDGHIRGWRWR+CTDIE+PIY +GSHIEPVMDL NPQ+KGPWG
Sbjct: 121 DVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWG 180

Query: 181 ALSPIPENNAIATDAQ------------------ESCKIKMVFKGHSDYLHCIVARNTVN 240
           ALSPIPENNAIATDAQ                  ES K+KMVFKGHSDYLHCIVARNTVN
Sbjct: 181 ALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIVARNTVN 240

Query: 241 QIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFSCIRCIALDASESWLACADGRSL 300
           QIITGSEDGTARIWDCKSGKCIQ+IDPAKDKKLKGHFS +RCIALDASESWLACADGRSL
Sbjct: 241 QIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLACADGRSL 300

Query: 301 SVWNLPSSEFISKTLTRSSMQDMAFCDNQILGVGAEPSLTRFDVNGSILSQIQCAPQSAF 360
           SVWNLPSSEFISKTLTRSS+QDM FCDNQILGVGAEP LTRFD+NGS+LSQIQCAPQSAF
Sbjct: 301 SVWNLPSSEFISKTLTRSSLQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAF 360

Query: 361 SVALHPSGVAAVGGYGGLVDVISQFGSHLCTFRCQYR 380
           SVALHPSGVAAVGGYGGL+DVISQFGSHLCTF CQYR
Sbjct: 361 SVALHPSGVAAVGGYGGLIDVISQFGSHLCTFCCQYR 369

[Close]

BLAST of MS023104 vs. ExPASy TrEMBL
Match: A0A0A0LWJ2 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G589670 PE=3 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.5e-182
Identity = 316/397 (79.60%), Postives = 333/397 (83.88%), Query Frame = 0


Query: 1   MSADATNWDEYAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           M  DATNWDE AYRESI+KERE+QTRTVFRTAWAPSLNG PETIV ASSDGS+ASYSIAS
Sbjct: 1   MLGDATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS 60

Query: 61  CISKLHFGYSNAKRQVHLIVCSQFISKFCKLVLMVHFVPYSSFLAAEPHCFLQGHDGPAY 120
           CISKL FGY N K                            S LAAEP+CFLQGHDGP Y
Sbjct: 61  CISKLQFGYGNTK----------------------------SLLAAEPNCFLQGHDGPTY 120

Query: 121 DVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFKGSHIEPVMDLTNPQYKGPWG 180
           DVKFYD+GDNTLLLSCGDDGHIRGWRWR+CTDI++PI  +GSHIEPVMDL NPQ+KGPWG
Sbjct: 121 DVKFYDNGDNTLLLSCGDDGHIRGWRWRDCTDIKVPISLQGSHIEPVMDLINPQFKGPWG 180

Query: 181 ALSPIPENNAIATDAQ------------------ESCKIKMVFKGHSDYLHCIVARNTVN 240
           ALSPIPENNAIATDAQ                  ES K+KMVFKGHSDYLHCIVARNTVN
Sbjct: 181 ALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIVARNTVN 240

Query: 241 QIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFSCIRCIALDASESWLACADGRSL 300
           QIITGSEDGTARIWDCKSGKCIQ+IDPAKDKKLKGHFS +RCIALDASESWLACADGRS+
Sbjct: 241 QIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLACADGRSI 300

Query: 301 SVWNLPSSEFISKTLTRSSMQDMAFCDNQILGVGAEPSLTRFDVNGSILSQIQCAPQSAF 360
           SVWNLPSSEFISKTLTRSS+QDM FCDNQILGVGAEP LTRFD+NGS+LSQIQCAPQSAF
Sbjct: 301 SVWNLPSSEFISKTLTRSSLQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAPQSAF 360

Query: 361 SVALHPSGVAAVGGYGGLVDVISQFGSHLCTFRCQYR 380
           SVALHPSGVAAVGGYGGLVDVISQFGSHLCTF CQYR
Sbjct: 361 SVALHPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 369

[Close]

BLAST of MS023104 vs. ExPASy TrEMBL
Match: A0A6J1F6F8 (THO complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111441243 PE=3 SV=1)

HSP 1 Score: 637.5 bits (1643), Expect = 3.6e-179
Identity = 312/398 (78.39%), Postives = 333/398 (83.67%), Query Frame = 0


Query: 1   MSADATNWDEYAYRESIFKEREVQTRTVFRTAWAPSLNGGPETIVVASSDGSIASYSIAS 60
           M  DATNWDE AYRES++KEREVQTRTVFRTAWAPSL+G PE+IVVASSDGSIASYSIAS
Sbjct: 1   MLGDATNWDEDAYRESLYKEREVQTRTVFRTAWAPSLSGCPESIVVASSDGSIASYSIAS 60

Query: 61  CISKLHFGYSNAKRQVHLIVCSQFISKFCKLVLMVHFVPYSSFLAAEPHCFLQGHDGPAY 120
           CISKLH GY N K                            S LAAEPHCFLQGHDGP Y
Sbjct: 61  CISKLHSGYGNTK----------------------------SLLAAEPHCFLQGHDGPTY 120

Query: 121 DVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFKGSHIEPVMDLTNPQYKGPWG 180
           DVKF+D+GDNTLLLSCGDDGHIRGWRW ECTDIE+PIY +GSHIEPVMDL NPQYKGPWG
Sbjct: 121 DVKFFDAGDNTLLLSCGDDGHIRGWRWNECTDIEVPIYLQGSHIEPVMDLMNPQYKGPWG 180

Query: 181 ALSPIPENNAIATDAQ------------------ESCKIKMVFKGHSDYLHCIVARNTVN 240
           ALSPIPENNAIAT+AQ                  ES KIKMVFKGHSDYLHCIVARNTVN
Sbjct: 181 ALSPIPENNAIATNAQSGSIFSAAGDSCAYCWDLESGKIKMVFKGHSDYLHCIVARNTVN 240

Query: 241 QIITGSEDGTARIWDCKSGKCIQVIDPAKD-KKLKGHFSCIRCIALDASESWLACADGRS 300
           QIITGSEDGTARIWDCK+GKCIQ++DPAKD KK KG+FSC+RCIALDASESWLACADGRS
Sbjct: 241 QIITGSEDGTARIWDCKTGKCIQLLDPAKDNKKQKGNFSCVRCIALDASESWLACADGRS 300

Query: 301 LSVWNLPSSEFISKTLTRSSMQDMAFCDNQILGVGAEPSLTRFDVNGSILSQIQCAPQSA 360
            SVWNLP+S+FIS+TLTRSSMQDM FCDNQILGVGAEP LTRFD++GSILS+IQCAPQSA
Sbjct: 301 FSVWNLPASDFISRTLTRSSMQDMVFCDNQILGVGAEPLLTRFDIHGSILSEIQCAPQSA 360

Query: 361 FSVALHPSGVAAVGGYGGLVDVISQFGSHLCTFRCQYR 380
           FSVA+HPSGVAAVGGYGGLVDVISQFGSHLCTF CQYR
Sbjct: 361 FSVAVHPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 370

[Close]

BLAST of MS023104 vs. TAIR 10
Match: AT2G19430.1 (DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1 )

HSP 1 Score: 415.2 bits (1066), Expect = 5.5e-116
Identity = 206/395 (52.15%), Postives = 270/395 (68.35%), Query Frame = 0


Query: 1   MSADATNWDEYAYRESIFKEREVQTRTVFRTAWAPSLN-GGPETIVVASSDGSIASYSIA 60
           M  DATNW+E  YRESI KERE++TRTVFRTAWAP      P+  VVASSDG++A +S+ 
Sbjct: 1   MYGDATNWNEDEYRESILKEREIETRTVFRTAWAPPARISNPDAFVVASSDGTLAFHSLN 60

Query: 61  SCISK-LHFGYSNAKRQVHLIVCSQFISKFCKLVLMVHFVPYSSFLAAEPHCFLQGHDGP 120
           S +S+   FGYS  +                              + AEP   ++ H+GP
Sbjct: 61  SLVSQSASFGYSKGQ----------------------------DVMVAEPERVVRAHEGP 120

Query: 121 AYDVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFKGSHIEPVMDLTNPQYKGP 180
           AYDVKFY   ++ LLLSCGDDG +RGW+WRE  + ++ ++ K +H++P+++L NPQ+KGP
Sbjct: 121 AYDVKFYGEDEDALLLSCGDDGRVRGWKWREFAESDVSLHLKENHLKPLLELINPQHKGP 180

Query: 181 WGALSPIPENNAIATDAQ------------------ESCKIKMVFKGHSDYLHCIVARNT 240
           WGALSP+PE NA++ D Q                  ES KIKM FKGHSDYLH +V+R++
Sbjct: 181 WGALSPMPEINAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSS 240

Query: 241 VNQIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFSCIRCIALDASESWLACADGR 300
            +QI+TGSEDGTARIWDCK+GKC++VI  ++DKK +   S    +ALD SESWL C  G+
Sbjct: 241 ASQILTGSEDGTARIWDCKTGKCVKVIG-SQDKKSRLRVS---SMALDGSESWLVCGQGK 300

Query: 301 SLSVWNLPSSEFISKTLTRSSMQDMAFCDNQILGVGAEPSLTRFDVNGSILSQIQCAPQS 360
           +L++WNLP+SE +      + +QD+ F + QIL VGAEP L RFD+NG++LSQI CAP S
Sbjct: 301 NLALWNLPASECVQTIPIPAHVQDVMFDEKQILTVGAEPLLRRFDLNGALLSQIHCAPCS 360

Query: 361 AFSVALHPSGVAAVGGYGGLVDVISQFGSHLCTFR 376
            FS++LHP+GV AVGGYGG+VDVISQFGSHLCTFR
Sbjct: 361 VFSISLHPAGVVAVGGYGGIVDVISQFGSHLCTFR 363

[Close]

BLAST of MS023104 vs. TAIR 10
Match: AT2G43770.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 5.3e-10
Identity = 62/226 (27.43%), Postives = 90/226 (39.82%), Query Frame = 0


Query: 108 PHCFLQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFKGSHIEPV 167
           P   L GH    Y +KF  +G  TL+ S   D  I  + WR   D +  +  KG H   +
Sbjct: 45  PIMLLSGHPSAVYTMKFNPAG--TLIASGSHDREI--FLWRVHGDCKNFMVLKG-HKNAI 104

Query: 168 MDLTNPQYKGPWGA-----LSPIPENNAIATDAQESCKIKMVFKGHSDYLHCIVARNTVN 227
           +DL        W +     +S  P+    A D +   +IK + +  S    C   R    
Sbjct: 105 LDL-------HWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPP 164

Query: 228 QIITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFSCIRCIALDASESWLACADGRSL 287
            II+GS+DGTA++WD +    IQ   P K +     FS       DA++          +
Sbjct: 165 LIISGSDDGTAKLWDMRQRGAIQTF-PDKYQITAVSFS-------DAADKIFTGGVDNDV 224

Query: 288 SVWNLPSSEFISKTLTRSSMQDMAFCDNQILGVGAEPSLTRFDVNG 329
            VW+L   E    T+T    QD       I G+   P  +    NG
Sbjct: 225 KVWDLRKGE---ATMTLEGHQD------TITGMSLSPDGSYLLTNG 241

[Close]

BLAST of MS023104 vs. TAIR 10
Match: AT1G73720.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 59.3 bits (142), Expect = 7.7e-09
Identity = 37/135 (27.41%), Postives = 60/135 (44.44%), Query Frame = 0


Query: 115 HDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFKGSHIEPVMDLTNPQ 174
           HD P   + F  S D+ +L S   DG I+ WR R    I        +H + V  L+   
Sbjct: 262 HDDPVLCIDF--SRDSEMLASGSQDGKIKIWRIRTGVCIRR----FDAHSQGVTSLS--- 321

Query: 175 YKGPWGALSPIPENNAIATDAQESCKIKMVFKGHSDYLHCIVARNTVNQIITGSEDGTAR 234
           +      L     +        +S K+   F+GH+ Y++  +  +  ++IIT S D T +
Sbjct: 322 FSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVK 381

Query: 235 IWDCKSGKCIQVIDP 250
           +WD K+  C+Q   P
Sbjct: 382 VWDSKTTDCLQTFKP 387

[Close]

BLAST of MS023104 vs. TAIR 10
Match: AT3G16650.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 1.0e-08
Identity = 50/217 (23.04%), Postives = 88/217 (40.55%), Query Frame = 0


Query: 112 LQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFKGSHIEPVMDLT 171
           L GH G    +    S  +T + S GDD  ++ W      D+E     +  H        
Sbjct: 208 LTGHIGQVRGLAV--SNRHTYMFSAGDDKQVKCW------DLEQNKVIRSYH-------- 267

Query: 172 NPQYKGPWGALSPIPENNAIATDAQES--------CKIKMVFKGHSDYLHCIVARNTVNQ 231
                G +  L+  P  + + T  ++S         K+++    H   +  ++AR T  Q
Sbjct: 268 -GHLHGVY-CLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLPHDSDVFSVLARPTDPQ 327

Query: 232 IITGSEDGTARIWDCKSGKCIQVIDPAKDKKLKGHFSCIRCIALDASESWLACADGRSLS 291
           +ITGS D T + WD + GK +  I          H   +R +AL   E+    A   ++ 
Sbjct: 328 VITGSHDSTIKFWDLRYGKSMATI--------TNHKKTVRAMALHPKENDFVSASADNIK 387

Query: 292 VWNLPSSEFISK--TLTRSSMQDMAFCDNQILGVGAE 319
            ++LP  EF     +L R  +  +A  ++ ++  G +
Sbjct: 388 KFSLPKGEFCHNMLSLQRDIINAVAVNEDGVMVTGGD 398

[Close]

BLAST of MS023104 vs. TAIR 10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 1.0e-08
Identity = 49/180 (27.22%), Postives = 79/180 (43.89%), Query Frame = 0


Query: 112 LQGHDGPAYDVKFYDSGDNTLLLSCGDDGHIRGWRWRECTDIEMPIYFKGSHIEPVMDL- 171
           L+GH      VKF  S D  LL S   D  +  W     T+  +   ++G H   + DL 
Sbjct: 39  LEGHTAAISCVKF--SNDGNLLASASVDKTMILW---SATNYSLIHRYEG-HSSGISDLA 98

Query: 172 --TNPQYKGPWGALSPIPENNAIATDAQESCKIKMVFKGHSDYLHCIVARNTVNQIITGS 231
             ++  Y       S   +      DA+   +   V +GH++++ C+      N I++GS
Sbjct: 99  WSSDSHY-----TCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGS 158

Query: 232 EDGTARIWDCKSGKCIQVIDPAKDKKLKGHFSCIRCIALDASESWLACA--DGRSLSVWN 287
            D T RIW+ K+GKC+++I        K H   I  +  +   S +  A  DG S  +W+
Sbjct: 159 FDETIRIWEVKTGKCVRMI--------KAHSMPISSVHFNRDGSLIVSASHDG-SCKIWD 198

The following BLAST results are available for this feature:

BLAST of MS023104 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147721.1	9.9e-200	87.66	THO complex subunit 6 [Momordica charantia]	[more]
KAG6588052.1	7.6e-192	82.71	THO complex subunit 6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7021946.1	2.2e-191	82.71	THO complex subunit 6 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038880261.1	1.1e-187	82.12	THO complex subunit 6 isoform X4 [Benincasa hispida] >XP_038880262.1 THO complex...	[more]
XP_008450878.1	4.0e-185	80.60	PREDICTED: THO complex subunit 6 [Cucumis melo] >KAA0055809.1 THO complex subuni...	[more]

BLAST of MS023104 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L4M1	7.8e-115	52.15	THO complex subunit 6 OS=Arabidopsis thaliana OX=3702 GN=THO6 PE=1 SV=1	[more]
Q5XJS5	3.5e-22	28.27	THO complex subunit 6 homolog OS=Danio rerio OX=7955 GN=thoc6 PE=2 SV=1	[more]
Q86W42	1.0e-21	24.85	THO complex subunit 6 homolog OS=Homo sapiens OX=9606 GN=THOC6 PE=1 SV=1	[more]
Q5U4D9	1.1e-20	24.25	THO complex subunit 6 homolog OS=Mus musculus OX=10090 GN=Thoc6 PE=1 SV=1	[more]
Q6AY87	1.1e-20	24.25	THO complex subunit 6 homolog OS=Rattus norvegicus OX=10116 GN=Thoc6 PE=2 SV=1	[more]

BLAST of MS023104 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D376	4.8e-200	87.66	THO complex subunit 6 OS=Momordica charantia OX=3673 GN=LOC111016586 PE=3 SV=1	[more]
A0A5A7UQQ6	1.9e-185	80.60	THO complex subunit 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16...	[more]
A0A1S3BQ99	1.9e-185	80.60	THO complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103492340 PE=3 SV=1	[more]
A0A0A0LWJ2	1.5e-182	79.60	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G...	[more]
A0A6J1F6F8	3.6e-179	78.39	THO complex subunit 6 OS=Cucurbita moschata OX=3662 GN=LOC111441243 PE=3 SV=1	[more]

BLAST of MS023104 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19430.1	5.5e-116	52.15	DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1	[more]
AT2G43770.1	5.3e-10	27.43	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G73720.1	7.7e-09	27.41	transducin family protein / WD-40 repeat family protein	[more]
AT3G16650.1	1.0e-08	23.04	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G02730.1	1.0e-08	27.22	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 105..146 e-value: 1.4E-4 score: 31.2 coord: 248..286 e-value: 0.5 score: 18.9 coord: 14..57 e-value: 170.0 score: 2.9 coord: 198..237 e-value: 4.2E-6 score: 36.3 coord: 327..365 e-value: 83.0 score: 4.9
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 253..286 e-value: 3.1E-4 score: 21.5 coord: 203..237 e-value: 7.1E-4 score: 20.3 coord: 112..145 e-value: 0.014 score: 16.3
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 112..145 score: 8.703868
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 205..246 score: 13.348998
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 13..373 e-value: 1.3E-32 score: 114.9
IPR042626	THO complex subunit 6	PANTHER	PTHR44411	THO COMPLEX SUBUNIT 6 HOMOLOG	coord: 9..376
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 205..237 score: 10.126507
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 28..364

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023104.1	MS023104.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding