MS023094 (gene) Bitter gourd (TR) v1

Overview


Name	MS023094
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Translation machinery-associated protein 22
Location	scaffold78: 75637 .. 77148 (-)
RNA-Seq Expression	MS023094
Synteny	MS023094

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGAAACCCCAACCGGTGCTTGTATTGTACTGTCCCGTCTGCAGTTTGCCGGCGGAGTACTGCGAATTCGGACCCGATTTTGAGAAATGCAAGCCTTGGTTGATCCGGAATGCCCCGGACCTCTACCCCGATCTCCTCAAAGGTTCTTCGCACTCCAAAACCCTAATCTCCTCCTATTTAGTTTCTCCAACCTATTCTAAATCCGAGTTCATCCACTAACATTCCGTTGTTTGTTTTTTTGTTTGTAGAGGCAAACGCGAAGGAAGCTGCTGAAGCTTCCAACCAACTGCAGTCCACCAGTATCTCATCTGCTGCTGGCGATGGAGCCGCTTCTTCAGGTTAACTTGTCAAATATATATATATGTGTGTGTGTGTGTCTGTATCTATATGTATAATAGTTTCTATTTTTTTGTTTCGTTGTGTCGGCATCCTAGGTTCACTTAAATATGTCGAAAGCTACTCACCACGGTGTTATTTACTTCACTAATGAACACATCTCAATTGTTTGAGTTTGAGCACATTTGATTTTGCGATCCATTCAGAGGCTTGTTCTGATGTACCTGCCTAGTGTCAGCGTTTCTGATGTCGGAATTCTGCAGATGGTCGGAAATATATAATTTGAGTTCAGTAGGATTAATTGACCCTAAAATAAATTGTTCAATTTAGTTGGTCAAATCTCTTTCATCTCAAAGAGATTGCAGTGAGTAGTCCCATTAAATGTTTTTCCCCCTTTTGCCAAATGGTTCACTTTCTTGCCCTTCTTCTTAAGGTGACTTTTGACTTAATTGTCTTGTGTCTGACAGCGTCCAATTGTATTGTATTTTAAGCAACATTTGCTTGCTCGTAATTGTTTAATAGTAATTTTATATTTGTTTGGTCTCAATCTACGACTTATTTCTTTAGTCACTCTTTTCATTTTTTGTGGAGAACTACAGCACCTAAGCAAGAGGAAGTGAAACGTCTACCTGGTGGCAAGATAAAGAAAAAGGTAACTTAGTTTTTAAACTTGGTTCTGTTGTCACTGTTTAATGGGACTAGAAACATGATATATGTAATTTATTGGATTTACTTGTAGGAAAAGCAAGAAGTTGTAATTGAGAAGGTTACACGAAATAAGAGAAAGTGCATTACAACTGTGAAAGGGTTAGACCTTTTTGGTGAGCAATACTTTGTTTTTTTTATCCCTACTTGACACTTCTTCATTGTTACATTAATTCTCAATAACAGTTCCTCTAACTGGATTTAGGAGTTAAACTAAGTGATGCTTCGAAGAAACTTGGGAAGAAGTTTGCTACTGGGGCCTCTGTGGTTAAGGTTATTAACTTATGGTGCCATTACTTAAGTATCTTTCTACTGTAGATGCCTTTGATATCTTACCATATGCTAAATGCTTGGTTTTAGGGACCAACTGAGAAAGAGCAAATTGATGTTCAAGGGGACATAGCCTATGATATTGTAGATTTCCTTACTGAGACTTGGCCCGATGTAAGATATTTATTCATTATT

mRNA sequence

ATGGCGGAGAAACCCCAACCGGTGCTTGTATTGTACTGTCCCGTCTGCAGTTTGCCGGCGGAGTACTGCGAATTCGGACCCGATTTTGAGAAATGCAAGCCTTGGTTGATCCGGAATGCCCCGGACCTCTACCCCGATCTCCTCAAAGAGGCAAACGCGAAGGAAGCTGCTGAAGCTTCCAACCAACTGCAGTCCACCAGTATCTCATCTGCTGCTGGCGATGGAGCCGCTTCTTCAGCACCTAAGCAAGAGGAAGTGAAACGTCTACCTGGTGGCAAGATAAAGAAAAAGGAAAAGCAAGAAGTTGTAATTGAGAAGGTTACACGAAATAAGAGAAAGTGCATTACAACTGTGAAAGGGTTAGACCTTTTTGGAGTTAAACTAAGTGATGCTTCGAAGAAACTTGGGAAGAAGTTTGCTACTGGGGCCTCTGTGGTTAAGGGACCAACTGAGAAAGAGCAAATTGATGTTCAAGGGGACATAGCCTATGATATTGTAGATTTCCTTACTGAGACTTGGCCCGATGTAAGATATTTATTCATTATT

Coding sequence (CDS)

ATGGCGGAGAAACCCCAACCGGTGCTTGTATTGTACTGTCCCGTCTGCAGTTTGCCGGCGGAGTACTGCGAATTCGGACCCGATTTTGAGAAATGCAAGCCTTGGTTGATCCGGAATGCCCCGGACCTCTACCCCGATCTCCTCAAAGAGGCAAACGCGAAGGAAGCTGCTGAAGCTTCCAACCAACTGCAGTCCACCAGTATCTCATCTGCTGCTGGCGATGGAGCCGCTTCTTCAGCACCTAAGCAAGAGGAAGTGAAACGTCTACCTGGTGGCAAGATAAAGAAAAAGGAAAAGCAAGAAGTTGTAATTGAGAAGGTTACACGAAATAAGAGAAAGTGCATTACAACTGTGAAAGGGTTAGACCTTTTTGGAGTTAAACTAAGTGATGCTTCGAAGAAACTTGGGAAGAAGTTTGCTACTGGGGCCTCTGTGGTTAAGGGACCAACTGAGAAAGAGCAAATTGATGTTCAAGGGGACATAGCCTATGATATTGTAGATTTCCTTACTGAGACTTGGCCCGATGTAAGATATTTATTCATTATT

Protein sequence

MAEKPQPVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEASNQLQSTSISSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDVRYLFII

Homology

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BLAST of MS023094 vs. NCBI nr
Match: XP_022147665.1 (translation machinery-associated protein 22 [Momordica charantia])

HSP 1 Score: 344.7 bits (883), Expect = 4.7e-91
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MAEKPQPVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEAS 60
           MAEKPQPVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEAS
Sbjct: 1   MAEKPQPVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEAS 60

Query: 61  NQLQSTSISSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQSTSISSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDV 177
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDV
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDV 176

[Close]

BLAST of MS023094 vs. NCBI nr
Match: KAA0055826.1 (translation machinery-associated protein 22 [Cucumis melo var. makuwa])

HSP 1 Score: 334.3 bits (856), Expect = 6.4e-88
Identity = 169/176 (96.02%), Postives = 172/176 (97.73%), Query Frame = 0


Query: 1   MAEKPQPVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEAS 60
           MAEKPQPV VLYCPVCSLPAEYCEFGPDFEKCKPWLI+NAPDLYPDLLKEANAKEA E S
Sbjct: 1   MAEKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  NQLQSTSISSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQSTSISSAAGDGAASS PKQEEVKRLPGGKIKKK+KQEVVIEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGAASSGPKQEEVKRLPGGKIKKKDKQEVVIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDV 177
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDF+TETWPDV
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFITETWPDV 176

[Close]

BLAST of MS023094 vs. NCBI nr
Match: XP_004144004.1 (translation machinery-associated protein 22 [Cucumis sativus] >KAE8653433.1 hypothetical protein Csa_007666 [Cucumis sativus])

HSP 1 Score: 334.0 bits (855), Expect = 8.3e-88
Identity = 168/176 (95.45%), Postives = 172/176 (97.73%), Query Frame = 0


Query: 1   MAEKPQPVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEAS 60
           MAEKPQPV VLYCPVCSLPAEYCEFGPDFEKCKPWLI+NAPDLYPDLLKEANAKEA E S
Sbjct: 1   MAEKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  NQLQSTSISSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQSTSISSAAGDGAASS PKQEEVKRLPGGKIKKK+KQEV+IEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGAASSGPKQEEVKRLPGGKIKKKDKQEVIIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDV 177
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDF+TETWPDV
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFITETWPDV 176

[Close]

BLAST of MS023094 vs. NCBI nr
Match: XP_038879416.1 (translation machinery-associated protein 22 [Benincasa hispida])

HSP 1 Score: 331.3 bits (848), Expect = 5.4e-87
Identity = 167/176 (94.89%), Postives = 172/176 (97.73%), Query Frame = 0


Query: 1   MAEKPQPVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEAS 60
           MAEKPQPV VLYCPVCSLPAEYCEFGPDFEKCKPWLI+NAPDLYPDLLKEANAKEA E S
Sbjct: 1   MAEKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  NQLQSTSISSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQSTSISSAAGDGAASSA KQEEVKRLPGGKIKKK+KQEV+IEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGAASSASKQEEVKRLPGGKIKKKDKQEVIIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDV 177
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI+YDIVDF+TETWPDV
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWPDV 176

[Close]

BLAST of MS023094 vs. NCBI nr
Match: KAG6590002.1 (hypothetical protein SDJN03_15425, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 328.2 bits (840), Expect = 4.6e-86
Identity = 165/176 (93.75%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MAEKPQPVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEAS 60
           MA+KPQPV VLYCPVCSLPAEYCEFGPDFEKCKPWLI+NAPDLYPDLLKEANAKEA E S
Sbjct: 1   MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  NQLQSTSISSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQSTSISSAAGDGA SSAPKQEEVKRLPGGKIKKKE+QEV+IEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDV 177
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI+YDIVDF+TETW DV
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDV 176

[Close]

BLAST of MS023094 vs. ExPASy Swiss-Prot
Match: Q2H5Z7 (Translation machinery-associated protein 22 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=TMA22 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.2e-27
Identity = 76/178 (42.70%), Postives = 107/178 (60.11%), Query Frame = 0


Query: 1   MAEKPQPV--LVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAE 60
           MAE P PV   ++YC VC+LP EYCE+G   +KC+ WL +  PDLY  +     + EA E
Sbjct: 1   MAE-PTPVGREIIYCGVCTLPPEYCEYGGTTKKCQEWLEKKHPDLYARIW----SPEALE 60

Query: 61  ASNQLQSTSISSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTV 120
           A+    S +    A   AA  A K E  ++    K+    K  V I+++ RNKRK +T+V
Sbjct: 61  AATASLSLAAQERAAKDAAKKAAKAEAAEQKHADKL---AKSVVTIKRIERNKRKFVTSV 120

Query: 121 KGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDV 177
            GL+ FG++L   +K  GKKFATGASV K P+  E+I VQGD++ +I +FL E + D+
Sbjct: 121 TGLEAFGLELKKVAKDFGKKFATGASVTKVPSGGEEIVVQGDVSGEIEEFLLEKYKDI 170

[Close]

BLAST of MS023094 vs. ExPASy Swiss-Prot
Match: O42929 (Translation machinery-associated protein 22 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tma22 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-26
Identity = 77/180 (42.78%), Postives = 106/180 (58.89%), Query Frame = 0


Query: 1   MAEKPQPVL--VLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAE 60
           MA +  P L  VLYC VC+LP EYCEF    +KCK WL  + PD+Y  L  E       +
Sbjct: 1   MASQTIPKLKSVLYCDVCTLPVEYCEFEGTLKKCKEWLKSSHPDVYDKLYGE------QD 60

Query: 61  ASNQLQSTSISSAAGDGAASSAPKQ--EEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCIT 120
            S  L++T   S   D  A   P +  +E KR+   + K+    +V+I+ + R KRK +T
Sbjct: 61  LSKDLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRM-ASKVLIKTIERTKRKRVT 120

Query: 121 TVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDV 177
           TV+GLD FG++   A+K L  KFATGASV K   +K++I VQGD+ YDI DF+ E + +V
Sbjct: 121 TVQGLDAFGIETKKAAKMLANKFATGASVTKTADKKDEIVVQGDLNYDIFDFILEKFKEV 173

[Close]

BLAST of MS023094 vs. ExPASy Swiss-Prot
Match: A4QVI3 (Translation machinery-associated protein 22 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=TMA22 PE=3 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 3.6e-25
Identity = 69/173 (39.88%), Postives = 100/173 (57.80%), Query Frame = 0


Query: 4   KPQPVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEASNQL 63
           +PQ   V YC VCSLP EYCE+G   +KC+ WL RN  ++Y  +     + EA +A+   
Sbjct: 13  EPQGREVTYCGVCSLPPEYCEYGGTVKKCQDWLQRNNQEMYDRIW----SPEALQAATAA 72

Query: 64  QSTSISSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKGLDL 123
            S      A   A   A K E  +     K+K   K  V ++++ RNKRK +T+V GL+ 
Sbjct: 73  LSVEAQQRAEKDAKKKAAKAEAAEAKHADKLK---KSVVTVKRIERNKRKYVTSVSGLES 132

Query: 124 FGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDV 177
           FG++L   +K  GKKFATG+SV K  +  E+I VQGD++ +I +F+ E + DV
Sbjct: 133 FGLELKKVAKDFGKKFATGSSVTKVASGGEEIVVQGDVSDEIKEFIVEKYKDV 178

[Close]

BLAST of MS023094 vs. ExPASy Swiss-Prot
Match: Q9P3T4 (Translation machinery-associated protein 22 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=tma-22 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.1e-25
Identity = 66/168 (39.29%), Postives = 100/168 (59.52%), Query Frame = 0


Query: 10  VLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLK-EANAKEAAEASNQLQSTSI 69
           V+YC VCSLP EYCE+G   +KC+ WL +N P +Y  +   E    E A  S + Q  ++
Sbjct: 9   VVYCGVCSLPPEYCEYGGTVKKCQQWLEKNQPTMYSRIWSPEVLEAEMASLSVEAQERAM 68

Query: 70  SSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKGLDLFGVKL 129
             A    A + A +Q++          K+    V I+++ RNKRK +T+V GL+ FG++L
Sbjct: 69  KDAKKKAAKAEAAEQKQA--------DKRANSVVTIKRIERNKRKYVTSVSGLEAFGLEL 128

Query: 130 SDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDV 177
              +K  GKKFATG+SV K P+  E+I VQGD++ +I +F+ E + +V
Sbjct: 129 KKVAKDFGKKFATGSSVTKVPSGGEEIVVQGDVSGEIEEFILEKYKEV 168

[Close]

BLAST of MS023094 vs. ExPASy Swiss-Prot
Match: Q5ZJ39 (Density-regulated protein OS=Gallus gallus OX=9031 GN=DENR PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.0e-24
Identity = 69/173 (39.88%), Postives = 99/173 (57.23%), Query Frame = 0


Query: 7   PVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEASNQLQST 66
           P+ VLYC VCSLP EYCE+ PD  KC+ WL +N PD +  L  E + K+ A         
Sbjct: 28  PLRVLYCGVCSLPTEYCEYMPDVTKCRQWLEKNFPDEFAKLTVENSPKQEAGVGE----- 87

Query: 67  SISSAAGDGAASSAPKQEEVKRLPGGKIKKKEK---QEVVIEKVTRNKRKCITTVKGLDL 126
                 G G A    ++++ KR   G+IK+K+K   Q+V I K+ R K+K +T V GL  
Sbjct: 88  ------GQGTAGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLAT 147

Query: 127 FGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDV 177
           F + L +A +   +KF+ GASV    T +++I +QGD   DI+D + E WP+V
Sbjct: 148 FEIDLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEV 185

[Close]

BLAST of MS023094 vs. ExPASy TrEMBL
Match: A0A0A0LWI1 (Translation machinery-associated protein 22 OS=Cucumis sativus OX=3659 GN=Csa_1G589080 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.3e-91
Identity = 174/182 (95.60%), Postives = 178/182 (97.80%), Query Frame = 0


Query: 1   MAEKPQPVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEAS 60
           MAEKPQPV VLYCPVCSLPAEYCEFGPDFEKCKPWLI+NAPDLYPDLLKEANAKEA E S
Sbjct: 1   MAEKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  NQLQSTSISSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQSTSISSAAGDGAASS PKQEEVKRLPGGKIKKK+KQEV+IEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGAASSGPKQEEVKRLPGGKIKKKDKQEVIIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDVRYLF 180
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDF+TETWPDVRYLF
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFITETWPDVRYLF 180

Query: 181 II 183
           II
Sbjct: 181 II 182

[Close]

BLAST of MS023094 vs. ExPASy TrEMBL
Match: A0A6J1D0S6 (Translation machinery-associated protein 22 OS=Momordica charantia OX=3673 GN=LOC111016533 PE=3 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.3e-91
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MAEKPQPVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEAS 60
           MAEKPQPVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEAS
Sbjct: 1   MAEKPQPVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEAS 60

Query: 61  NQLQSTSISSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQSTSISSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDV 177
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDV
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDV 176

[Close]

BLAST of MS023094 vs. ExPASy TrEMBL
Match: A0A5A7UNG3 (Translation machinery-associated protein 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G002210 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.1e-88
Identity = 169/176 (96.02%), Postives = 172/176 (97.73%), Query Frame = 0


Query: 1   MAEKPQPVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEAS 60
           MAEKPQPV VLYCPVCSLPAEYCEFGPDFEKCKPWLI+NAPDLYPDLLKEANAKEA E S
Sbjct: 1   MAEKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  NQLQSTSISSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQSTSISSAAGDGAASS PKQEEVKRLPGGKIKKK+KQEVVIEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGAASSGPKQEEVKRLPGGKIKKKDKQEVVIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDV 177
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDF+TETWPDV
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFITETWPDV 176

[Close]

BLAST of MS023094 vs. ExPASy TrEMBL
Match: A0A6J1H953 (Translation machinery-associated protein 22 OS=Cucurbita moschata OX=3662 GN=LOC111461628 PE=3 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.2e-86
Identity = 165/176 (93.75%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MAEKPQPVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEAS 60
           MA+KPQPV VLYCPVCSLPAEYCEFGPDFEKCKPWLI+NAPDLYPDLLKEANAKEA E S
Sbjct: 1   MADKPQPVRVLYCPVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  NQLQSTSISSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQSTSISSAAGDGA SSAPKQEEVKRLPGGKIKKKE+QEV+IEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDV 177
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI+YDIVDF+TETW DV
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDV 176

[Close]

BLAST of MS023094 vs. ExPASy TrEMBL
Match: A0A6J1JK26 (Translation machinery-associated protein 22 OS=Cucurbita maxima OX=3661 GN=LOC111485287 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.9e-86
Identity = 164/176 (93.18%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MAEKPQPVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEAS 60
           MA+KPQPV VLYCP+CSLPAEYCEFGPDFEKCKPWLI+NAPDLYPDLLKEANAKEA E S
Sbjct: 1   MADKPQPVRVLYCPICSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLLKEANAKEAGEVS 60

Query: 61  NQLQSTSISSAAGDGAASSAPKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKG 120
           NQLQSTSISSAAGDGA SSAPKQEEVKRLPGGKIKKKE+QEV+IEKVTRNKRKCITTVKG
Sbjct: 61  NQLQSTSISSAAGDGATSSAPKQEEVKRLPGGKIKKKERQEVIIEKVTRNKRKCITTVKG 120

Query: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPDV 177
           LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI+YDIVDF+TETW DV
Sbjct: 121 LDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVDFITETWRDV 176

[Close]

BLAST of MS023094 vs. TAIR 10
Match: AT5G11900.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 278.5 bits (711), Expect = 3.9e-75
Identity = 144/189 (76.19%), Postives = 160/189 (84.66%), Query Frame = 0


Query: 1   MAEKPQPVLVLYCPVCSLPAEYCEFGPDFEKCKPWLIRNAPDLYPDLLKEANAKEAAEAS 60
           MAEK +PV VLYC VCSLPAEYCEFGPDF +CKPWL+ NAPDLYPDLLKEAN K A   S
Sbjct: 1   MAEKLEPVKVLYCGVCSLPAEYCEFGPDFARCKPWLVENAPDLYPDLLKEANEKAADNVS 60

Query: 61  NQLQSTSISSAAGDGAASSA-----PKQEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCI 120
           ++LQS  ISS   DGA SSA      K+EEVKRLPGGK+KKK++QEV+IEKV RNKRKCI
Sbjct: 61  DKLQSVGISSGGADGAPSSAQTGGTSKKEEVKRLPGGKVKKKDRQEVIIEKVVRNKRKCI 120

Query: 121 TTVKGLDLFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVDFLTETWPD 180
           T VKGL+LFG+KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI YDIV+F+T+TWPD
Sbjct: 121 TIVKGLELFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIIYDIVEFITDTWPD 180

Query: 181 V--RYLFII 183
           V  R +F I
Sbjct: 181 VPERSIFFI 189

The following BLAST results are available for this feature:

BLAST of MS023094 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147665.1	4.7e-91	100.00	translation machinery-associated protein 22 [Momordica charantia]	[more]
KAA0055826.1	6.4e-88	96.02	translation machinery-associated protein 22 [Cucumis melo var. makuwa]	[more]
XP_004144004.1	8.3e-88	95.45	translation machinery-associated protein 22 [Cucumis sativus] >KAE8653433.1 hypo...	[more]
XP_038879416.1	5.4e-87	94.89	translation machinery-associated protein 22 [Benincasa hispida]	[more]
KAG6590002.1	4.6e-86	93.75	hypothetical protein SDJN03_15425, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MS023094 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2H5Z7	2.2e-27	42.70	Translation machinery-associated protein 22 OS=Chaetomium globosum (strain ATCC ...	[more]
O42929	1.5e-26	42.78	Translation machinery-associated protein 22 OS=Schizosaccharomyces pombe (strain...	[more]
A4QVI3	3.6e-25	39.88	Translation machinery-associated protein 22 OS=Magnaporthe oryzae (strain 70-15 ...	[more]
Q9P3T4	6.1e-25	39.29	Translation machinery-associated protein 22 OS=Neurospora crassa (strain ATCC 24...	[more]
Q5ZJ39	1.0e-24	39.88	Density-regulated protein OS=Gallus gallus OX=9031 GN=DENR PE=2 SV=1	[more]

BLAST of MS023094 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWI1	2.3e-91	95.60	Translation machinery-associated protein 22 OS=Cucumis sativus OX=3659 GN=Csa_1G...	[more]
A0A6J1D0S6	2.3e-91	100.00	Translation machinery-associated protein 22 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A5A7UNG3	3.1e-88	96.02	Translation machinery-associated protein 22 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1H953	2.2e-86	93.75	Translation machinery-associated protein 22 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JK26	2.9e-86	93.18	Translation machinery-associated protein 22 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of MS023094 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11900.1	3.9e-75	76.19	Translation initiation factor SUI1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005873	DENR family, eukaryotes	TIGRFAM	TIGR01159	TIGR01159	coord: 9..177 e-value: 1.7E-51 score: 172.5
IPR001950	SUI1 domain	PFAM	PF01253	SUI1	coord: 99..172 e-value: 9.2E-21 score: 74.1
IPR001950	SUI1 domain	PROSITE	PS50296	SUI1	coord: 102..173 score: 19.56601
None	No IPR available	GENE3D	3.30.780.10		coord: 48..176 e-value: 2.6E-20 score: 74.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..91
None	No IPR available	PANTHER	PTHR12789	DENSITY-REGULATED PROTEIN HOMOLOG	coord: 1..177
None	No IPR available	PANTHER	PTHR12789:SF3	TRANSLATION MACHINERY-ASSOCIATED PROTEIN 22	coord: 1..177
None	No IPR available	CDD	cd11607	DENR_C	coord: 100..176 e-value: 3.10453E-40 score: 129.6
IPR036877	SUI1 domain superfamily	SUPERFAMILY	55159	eIF1-like	coord: 19..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023094.1	MS023094.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
molecular_function	GO:0003743	translation initiation factor activity