MS023090 (gene) Bitter gourd (TR) v1

Overview


Name	MS023090
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	WD-40 repeat-containing protein MSI4-like
Location	scaffold78: 15784 .. 20818 (+)
RNA-Seq Expression	MS023090
Synteny	MS023090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTCTTCCCAGCCGCAGCAGCAGCAGCAGCAGCCGCAGCCGCCGCAGCAGCAACCTCAGCCTGTTGTCAAGAAGAAGGAGACGCGGGGCCGCAAGCCGAAGCCCAAGGACGAGAAGAAGGACGAGCAGCTTGCGAAGAAGATGAAGGCTCAGCATCAGCCCTCCGTCGACGAGCGCTACACTCAGTGGAAGTCTCTTGTTCCTGTTCTTTACGACTGGTTCGCCAACCACAATCTCGTCTGGCCCTCTCTTTCTTGCCGGTACTCTACACACTCCTCTTGATTCTGTTTCTTTTTCGCTCTTCTTCACACCCTAATGCAATGTGGGTGCTTCTTTCTCTTCTAGGGTTTTCTAATTGCTGTTTATTTGGCTTGTCTTTCTTCTTATTATGCGTCTGGTTATTCGTTGGGGAAAACACCTCCATTGGATTACTGGATCTGTCGCTTTTGAATTTTTAGGGTTTTTACTATGTATCGCATTTATGCAAGATGAGCTATTATTATCACATTGCATTGATTGGAGTTTCAACTCTTTTCCGGGTTCTAGGTGGGGTCCTCAGCTTGAGCAAGCGACGTATAAGAACCGCCAGCGTCTTTATCTTTCTGAACAGGTTAGACCATCGTCACAGTAAAATCAAGTGATTTGTTGGAATGGATCTATGGTTTATTTCTTGCTGTGGTTGTGCTGAATCCAGAACATATTGGTTAACAATATAAATTGGGGCGTGAAAATTCCTTAGGGAGAGGAACGAGCTTGTATTTGATTGGCGCTATGGACCGTTCATTTATAGTGTATAGCTGAAGTGTCATTTATTTATTTATTTTCTTGCTTCCGTGCTTCTAGACTGATGGTAGTGTTCCGAATACACTGGTCATTGCAAATTGTGAAGTGGTGAAACCTAGGGTTGCAGCTGCTGAACACATTTCTCAGGTGGTTTATCATATTTGATCAATTTTAAATTTGATTCATTCTCCTTAGTCCATGTATCATACTTGATTGTTGTATTTTCAGTTCAATGAAGAAGCTCGCTCTCCATTTGTGAAGAAGTACAAGACTATCATACACCCTGGTGAGGTACGGCTATGCATTTCTCAAATAATGAAGTCTGGAACAGATGAAAATATGAGCTACAATAAATTCATATAAGCTGGTTGATTCCTTCAGGCGCTTTTTTTTTTCATGTTTACATGTGGATATTGTTAAATTATTGTTTCATACTTGAGTTTCAAGGTTTGTCTCAGTCTTGGAACATTTATATTGATTCCTTTGGATAAGTCATTGCTGTCCAGTTGGAAGTTGAAAATGATGGTGGAGTTGTTTTAAAATTGTTCTAATGGTCTTTGTTGAATATTTTTACAGGTTAACAGAATTAGGGAACTTCCCCAGAATGCTAGAATTGTTGCCACACACACGGATAGTCCAGATGTATGTGCTAATGATTTTAGTTCTTGCATTATTTTGATTGAGAAGCTTATGCCTCGATTACGTTTATTCAACCCTATTGCTTTAAGTCTCTTTGGTATTCAACATTCAGGTCCTCATTTGGGATGTTGAGGCTCAACCTAACCGTCATGCTGTCCTTGGTGCCACAAATTCTCGCCCAGATTTGGTAATTCTGTTGAAAACTCAAACTGCTGACATGTTCTTTAAATGTTACTATGTCTTAAAGTTCTGGTATCCATCTCTTTTTGGCTGATTGAGGTTAAGCTAATCCCATTATAGAAGCTTACTGAGATATTGAATCATTGATATGTCCAACATGTTTAGTTTATTTTCTTACTGTTAAATGCTGCAGTCGTGGTTAAACAGTAGGCTGCCTATTTTAATGTCTCGTGAATGTGAATGGTCAAAGCATTTAATTGTTTTATTCAAATGGAGAGATTTTTCATAATAATTATCTAGAGCCGAGGGGGTTTCCCAAGCTGGTGGGTAGACGTGAAAAATCATGGAAAGCATGTATAACTTCCTAGGTCTCATGTTAATCTTAACAATTGTTCTGGGAACATGAAAGATGAATTATTCTGGTGTTTGTAACATGCACATTCTAAATTCTTCCTTGTTTGAAACCTTCATTATGCAATTTTGAGTTAACTTACAGTGCATTTGCAGATTCTGACTGGTCATCAAGAAAATGCAGAGTTTGCTCTAGCAATGTGCCCCACTGAACCTTATGTTCTCTCTGGAGGTTGAAAGCTTTCTGATCTTTTTTCTCATTAAAGTTGGTCCTTCTAATGAGACTCAATCTGCAAAGTTTTACTCGACTGTGGCATTGTTTCAGATTAGATGTCTCAAATTATTATTATTTTTCAAAATATATCAATTTCTTTGTTGTAATGGGATTATTACTATTTCATGGTGTGGGGTGTTAGAAAAGGGGTTCCATTTCTCAGATGCTATTTAATCTTATGCCAGGGAAGGACAAGTTAGTTGTTTTATGGAGTATCCAGGACCATATAACAACTTCGGCCACAGACCCTGCTGCTTCAAAATCACCAGGACCTGGTGGATCTATCATAAAAAAGGCGGGAGAGACAAATGATAAAGCTTCTGATGGGCCTTCTGTTGGGCCACGAGGAGTTTACCATGGTCACGAGGATACTGTTGAAGATGTGACCTTCTGTCCATCCAAGTAATATCTCAGTTCTGAATTTTGAGTCGTTCATGTTTTTATTTTTATTTTATTTTGAGAATTAGGAATATAAGGGCATATGGATGGGGCATTTAAAACCTTTTCTTTTATTTAATATACATTTAGATTTTTCATGTAGTACAGCAGGTGGTGATTTCCAGCTGGGGTTTGGTTTGATAGAGATGGAAGTCTAATTTTTAATGTTCTCGTTTCTAAGTTAAACTATTAACCACTTTTTCTTTTATTTTCTTTCTTAAGTGCACAGGAGTTTTGCAGCGTGGGAGATGACTCTTGTCTAATATTATGGGATGCCCGTGCTGGCTCTGGCCCAGCTGTTAAGGTCATAATTCTCTTGTTTAATTTTCTCTGTACTGTTCTTTATCATACTGGAAGTTGAAATCTGGGTTATAGAGCGTACATTGGAGTATGACCTTGGAATAACTACGTACTTGTCATTCTGTGACTCTAATATTTAGTATTTGTTATACTGGCCAAAGTTGATAGGATAAAATTTCCATGACGTTTTACCTTTTTTGTAGTAGCAACTATTTGGTTGTTTCATACCATTATTCTGCGTAGGAGCTTCATCCTGCATGACAAATAGGATGTCCCATAATTTACTTCTGCTTTTATGTTTTTATTTTCAGAGCTCGTATTTTAGGAGCTTCTGTTTATATTCATGCTAGTCTGACCTTTCTTTCTGGCTGGCAGGTTGAAAAAGCACATAATGCTGATCTTCATTGTGTTGATTGGAATCCTCATGATGATAATCTTATCATAACAGGGTAAGTTTTAATTTCTTATTCTCTCTTTATTAATGTTTATGGGAAAATGAGATCCGATAGACATAAAACAAGAAAAAATTTACAGAGACAGAGAGAAGAATAGTAAATAGCACTATGATCTTGCTGCTATTTGCCCGACTCCTTTAGTTGCTATTTCAATGAAATTCATTTTGTTATTAAAGAAAACAAGAAACAGAATTTGGCCGTCGTGTACCATTTGGTTTCACCTCTTTATATTTGATAGATCGTTTGGAATTAGGAAAGTGTAATTTTTAAGGTCCACTTACATTTTGACTAATCTCTCTTCAGGTCAGCAGATAACTCTATTCGTCTGTTTGATCGTCGGAACCTCACTTCTAATGGAGTTGGCTCGCCCATCTATAAATTTGAGGGCCATAAAGCAGCGGTTCTTTGTGTTCAGGTATTATTTTTGTTTTTGTTTTTTGTTACCTTTTGTCTTATTACTACTAGTTTTATTTTTGAATGCTCTTGCAATTAGTTGCAAAATGTGTTAATCGCACATACCCGTCCATATATTTTTTATTCAGTGGTCTCCAGATAAGTCATCTGTCTTTGGAAGTTCCGCAGAGGACGGGCTGTTGAATATCTGGGATTACGATAAGGTACAGCATTTTGAGATTAAAACCGTGTTTCTGTTTTGTTATCTTTCTTCCAGGATTTAATCGAGATAATAGTATCTTAAGCCATGAATTTCTTTTTCCCTTTTTCTTAGAGATCTGATTACAAAAAATACCACGACAACATCTGGCTGGTTTTATTTAGCGTTTCTGATATGTTTATGGTTCATATTAATTAATTGGTGTAATTTATTTGTCTTTGGATTTCTATTGGATTTTGGTAATATATATTCATGATGTTCTTTCTGGTCTCAACCTATTCCAGGTTGGTAAAAAGACAGAGCGAGCAACAAGGACACCTGCTGCTCCCCCAGGCTTATTTTTCCAGCATGCTGGGCACAGGTTTTAAATTACTGCCTTTTTCTGTTTGAGACACACGAACCAGACAAATGAGCACGTTAAACTCTTAGTTCATTCCTTTCCGAGAACTGCTATTCCTCGGATAGTTTTTCCTTCACCTGCATCATTGCAATAGTGTTAGTGCTTGATTTTAAGGTTACTTTATTCATCTAACCTTTTTGTCATATCCAGGGATAAGGTCGTTGACTTCCACTGGAATGCATCTGATCCATGGACTGTTGTCAGCGTGTCTGATGATTGTGATACAACTGGTGGAGGAGGAACATTGCAGGTCCACCACCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATTACCCCACTCCAAAGAAAAAGAAAGAAAAAAACTCCTTTAAAAACAATACAAGAACCACGAGCTTATTTTGCTAGGTTGCTTACACCATATTGTTTAATTATTTATATGTTTTCGGTTTGGGGTTGGAAGGGGGCTCATTGTTCTTTTTAAAATATACATTTAAAGAAAGTTTCTCTTGACGTTATGCTTGTGAGTTGCAGATATGGCGTATGAGTGATTTGATTTATCGGCCAGAAGATGAGGTGTTAGCTGAGCTTGAAAAATTCAAATCTCACGTAATTGAATGTGCTGCAAAGCCT

mRNA sequence

ATGGACTCTTCCCAGCCGCAGCAGCAGCAGCAGCAGCCGCAGCCGCCGCAGCAGCAACCTCAGCCTGTTGTCAAGAAGAAGGAGACGCGGGGCCGCAAGCCGAAGCCCAAGGACGAGAAGAAGGACGAGCAGCTTGCGAAGAAGATGAAGGCTCAGCATCAGCCCTCCGTCGACGAGCGCTACACTCAGTGGAAGTCTCTTGTTCCTGTTCTTTACGACTGGTTCGCCAACCACAATCTCGTCTGGCCCTCTCTTTCTTGCCGGTGGGGTCCTCAGCTTGAGCAAGCGACGTATAAGAACCGCCAGCGTCTTTATCTTTCTGAACAGACTGATGGTAGTGTTCCGAATACACTGGTCATTGCAAATTGTGAAGTGGTGAAACCTAGGGTTGCAGCTGCTGAACACATTTCTCAGTTCAATGAAGAAGCTCGCTCTCCATTTGTGAAGAAGTACAAGACTATCATACACCCTGGTGAGGTTAACAGAATTAGGGAACTTCCCCAGAATGCTAGAATTGTTGCCACACACACGGATAGTCCAGATGTCCTCATTTGGGATGTTGAGGCTCAACCTAACCGTCATGCTGTCCTTGGTGCCACAAATTCTCGCCCAGATTTGATTCTGACTGGTCATCAAGAAAATGCAGAGTTTGCTCTAGCAATGTGCCCCACTGAACCTTATGTTCTCTCTGGAGGGAAGGACAAGTTAGTTGTTTTATGGAGTATCCAGGACCATATAACAACTTCGGCCACAGACCCTGCTGCTTCAAAATCACCAGGACCTGGTGGATCTATCATAAAAAAGGCGGGAGAGACAAATGATAAAGCTTCTGATGGGCCTTCTGTTGGGCCACGAGGAGTTTACCATGGTCACGAGGATACTGTTGAAGATGTGACCTTCTGTCCATCCAATGCACAGGAGTTTTGCAGCGTGGGAGATGACTCTTGTCTAATATTATGGGATGCCCGTGCTGGCTCTGGCCCAGCTGTTAAGGTTGAAAAAGCACATAATGCTGATCTTCATTGTGTTGATTGGAATCCTCATGATGATAATCTTATCATAACAGGGTCAGCAGATAACTCTATTCGTCTGTTTGATCGTCGGAACCTCACTTCTAATGGAGTTGGCTCGCCCATCTATAAATTTGAGGGCCATAAAGCAGCGGTTCTTTGTGTTCAGTGGTCTCCAGATAAGTCATCTGTCTTTGGAAGTTCCGCAGAGGACGGGCTGTTGAATATCTGGGATTACGATAAGGTTGGTAAAAAGACAGAGCGAGCAACAAGGACACCTGCTGCTCCCCCAGGCTTATTTTTCCAGCATGCTGGGCACAGGGATAAGGTCGTTGACTTCCACTGGAATGCATCTGATCCATGGACTGTTGTCAGCGTGTCTGATGATTGTGATACAACTGGTGGAGGAGGAACATTGCAGATATGGCGTATGAGTGATTTGATTTATCGGCCAGAAGATGAGGTGTTAGCTGAGCTTGAAAAATTCAAATCTCACGTAATTGAATGTGCTGCAAAGCCT

Coding sequence (CDS)

ATGGACTCTTCCCAGCCGCAGCAGCAGCAGCAGCAGCCGCAGCCGCCGCAGCAGCAACCTCAGCCTGTTGTCAAGAAGAAGGAGACGCGGGGCCGCAAGCCGAAGCCCAAGGACGAGAAGAAGGACGAGCAGCTTGCGAAGAAGATGAAGGCTCAGCATCAGCCCTCCGTCGACGAGCGCTACACTCAGTGGAAGTCTCTTGTTCCTGTTCTTTACGACTGGTTCGCCAACCACAATCTCGTCTGGCCCTCTCTTTCTTGCCGGTGGGGTCCTCAGCTTGAGCAAGCGACGTATAAGAACCGCCAGCGTCTTTATCTTTCTGAACAGACTGATGGTAGTGTTCCGAATACACTGGTCATTGCAAATTGTGAAGTGGTGAAACCTAGGGTTGCAGCTGCTGAACACATTTCTCAGTTCAATGAAGAAGCTCGCTCTCCATTTGTGAAGAAGTACAAGACTATCATACACCCTGGTGAGGTTAACAGAATTAGGGAACTTCCCCAGAATGCTAGAATTGTTGCCACACACACGGATAGTCCAGATGTCCTCATTTGGGATGTTGAGGCTCAACCTAACCGTCATGCTGTCCTTGGTGCCACAAATTCTCGCCCAGATTTGATTCTGACTGGTCATCAAGAAAATGCAGAGTTTGCTCTAGCAATGTGCCCCACTGAACCTTATGTTCTCTCTGGAGGGAAGGACAAGTTAGTTGTTTTATGGAGTATCCAGGACCATATAACAACTTCGGCCACAGACCCTGCTGCTTCAAAATCACCAGGACCTGGTGGATCTATCATAAAAAAGGCGGGAGAGACAAATGATAAAGCTTCTGATGGGCCTTCTGTTGGGCCACGAGGAGTTTACCATGGTCACGAGGATACTGTTGAAGATGTGACCTTCTGTCCATCCAATGCACAGGAGTTTTGCAGCGTGGGAGATGACTCTTGTCTAATATTATGGGATGCCCGTGCTGGCTCTGGCCCAGCTGTTAAGGTTGAAAAAGCACATAATGCTGATCTTCATTGTGTTGATTGGAATCCTCATGATGATAATCTTATCATAACAGGGTCAGCAGATAACTCTATTCGTCTGTTTGATCGTCGGAACCTCACTTCTAATGGAGTTGGCTCGCCCATCTATAAATTTGAGGGCCATAAAGCAGCGGTTCTTTGTGTTCAGTGGTCTCCAGATAAGTCATCTGTCTTTGGAAGTTCCGCAGAGGACGGGCTGTTGAATATCTGGGATTACGATAAGGTTGGTAAAAAGACAGAGCGAGCAACAAGGACACCTGCTGCTCCCCCAGGCTTATTTTTCCAGCATGCTGGGCACAGGGATAAGGTCGTTGACTTCCACTGGAATGCATCTGATCCATGGACTGTTGTCAGCGTGTCTGATGATTGTGATACAACTGGTGGAGGAGGAACATTGCAGATATGGCGTATGAGTGATTTGATTTATCGGCCAGAAGATGAGGTGTTAGCTGAGCTTGAAAAATTCAAATCTCACGTAATTGAATGTGCTGCAAAGCCT

Protein sequence

MDSSQPQQQQQQPQPPQQQPQPVVKKKETRGRKPKPKDEKKDEQLAKKMKAQHQPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKLVVLWSIQDHITTSATDPAASKSPGPGGSIIKKAGETNDKASDGPSVGPRGVYHGHEDTVEDVTFCPSNAQEFCSVGDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDDNLIITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGGGGTLQIWRMSDLIYRPEDEVLAELEKFKSHVIECAAKP

Homology

[Close]

BLAST of MS023090 vs. NCBI nr
Match: XP_022147703.1 (WD-40 repeat-containing protein MSI4-like [Momordica charantia])

HSP 1 Score: 1048.1 bits (2709), Expect = 2.4e-302
Identity = 509/510 (99.80%), Postives = 509/510 (99.80%), Query Frame = 0


Query: 1   MDSSQPQQQQQQPQPPQQQPQPVVKKKETRGRKPKPKDEKKDEQLAKKMKAQHQPSVDER 60
           MDSSQPQQQQQQPQPPQQQPQPVVKKKETRGRKPKPKDEKKDEQLAKKMKAQHQPSVDER
Sbjct: 1   MDSSQPQQQQQQPQPPQQQPQPVVKKKETRGRKPKPKDEKKDEQLAKKMKAQHQPSVDER 60

Query: 61  YTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVI 120
           YTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVI
Sbjct: 61  YTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVI 120

Query: 121 ANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARIVATHTDSP 180
           ANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARIVATHTDSP
Sbjct: 121 ANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARIVATHTDSP 180

Query: 181 DVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKLVVLW 240
           DVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKLVVLW
Sbjct: 181 DVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKLVVLW 240

Query: 241 SIQDHITTSATDPAASKSPGPGGSIIKKAGETNDKASDGPSVGPRGVYHGHEDTVEDVTF 300
           SIQDHITTSATDPAASKSPG GGSIIKKAGETNDKASDGPSVGPRGVYHGHEDTVEDVTF
Sbjct: 241 SIQDHITTSATDPAASKSPGSGGSIIKKAGETNDKASDGPSVGPRGVYHGHEDTVEDVTF 300

Query: 301 CPSNAQEFCSVGDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDDNLIITGSADN 360
           CPSNAQEFCSVGDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDDNLIITGSADN
Sbjct: 301 CPSNAQEFCSVGDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDDNLIITGSADN 360

Query: 361 SIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVG 420
           SIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVG
Sbjct: 361 SIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVG 420

Query: 421 KKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGGGGTLQIWR 480
           KKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGGGGTLQIWR
Sbjct: 421 KKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGGGGTLQIWR 480

Query: 481 MSDLIYRPEDEVLAELEKFKSHVIECAAKP 511
           MSDLIYRPEDEVLAELEKFKSHVIECAAKP
Sbjct: 481 MSDLIYRPEDEVLAELEKFKSHVIECAAKP 510

[Close]

BLAST of MS023090 vs. NCBI nr
Match: XP_038880551.1 (WD-40 repeat-containing protein MSI4-like [Benincasa hispida])

HSP 1 Score: 1011.5 bits (2614), Expect = 2.5e-291
Identity = 496/516 (96.12%), Postives = 500/516 (96.90%), Query Frame = 0


Query: 1   MDSSQ-PQQQQQQPQPPQQQP-----QPVVKKKETRGRKPKPKDEKKDEQLAKKMKAQHQ 60
           MDSSQ  QQQQQQ Q PQQQP     QPVVKKKETRGRKPKPKDEKKDEQ  KKMKAQ Q
Sbjct: 1   MDSSQSQQQQQQQQQQPQQQPPPPPQQPVVKKKETRGRKPKPKDEKKDEQQTKKMKAQQQ 60

Query: 61  PSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSV 120
           PSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSV
Sbjct: 61  PSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSV 120

Query: 121 PNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARIVA 180
           PNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQN+RIVA
Sbjct: 121 PNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRIVA 180

Query: 181 THTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKD 240
           THTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKD
Sbjct: 181 THTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKD 240

Query: 241 KLVVLWSIQDHITTSATDPAASKSPGPGGSIIKKAGETNDKASDGPSVGPRGVYHGHEDT 300
           KLVVLWSIQDHITTSATDPAASKSPG GGSIIKK GE NDKASDGPS+GPRGVYHGHEDT
Sbjct: 241 KLVVLWSIQDHITTSATDPAASKSPGSGGSIIKKPGEANDKASDGPSIGPRGVYHGHEDT 300

Query: 301 VEDVTFCPSNAQEFCSVGDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDDNLII 360
           VEDVTFCPSNAQEFCSVGDDSCLILWDAR GSGPAVKVEKAHNADLHCVDWNPHDDNLII
Sbjct: 301 VEDVTFCPSNAQEFCSVGDDSCLILWDARTGSGPAVKVEKAHNADLHCVDWNPHDDNLII 360

Query: 361 TGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIW 420
           TGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIW
Sbjct: 361 TGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIW 420

Query: 421 DYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGGGG 480
           DYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNA+DPWTVVSVSDDCDTTGGGG
Sbjct: 421 DYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNAADPWTVVSVSDDCDTTGGGG 480

Query: 481 TLQIWRMSDLIYRPEDEVLAELEKFKSHVIECAAKP 511
           TLQIWRMSDLIYRPE+EVLAELEKFKSHVIECAAKP
Sbjct: 481 TLQIWRMSDLIYRPEEEVLAELEKFKSHVIECAAKP 516

[Close]

BLAST of MS023090 vs. NCBI nr
Match: XP_004135716.2 (WD-40 repeat-containing protein MSI4 [Cucumis sativus] >KGN66623.2 hypothetical protein Csa_007166 [Cucumis sativus])

HSP 1 Score: 1010.0 bits (2610), Expect = 7.3e-291
Identity = 495/518 (95.56%), Postives = 499/518 (96.33%), Query Frame = 0


Query: 1   MDSSQPQQQQQQPQPPQQQ-----PQ---PVVKKKETRGRKPKPKDEKKDEQLAKKMKAQ 60
           MDSSQPQQQQQQ  PPQQQ     PQ   PVVKKKETRGRKPKPKDEKKDEQL KKMKAQ
Sbjct: 1   MDSSQPQQQQQQQPPPQQQQPPPPPQQQTPVVKKKETRGRKPKPKDEKKDEQLTKKMKAQ 60

Query: 61  HQPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDG 120
            QPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDG
Sbjct: 61  QQPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDG 120

Query: 121 SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARI 180
           SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQN+RI
Sbjct: 121 SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRI 180

Query: 181 VATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGG 240
           VATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGG
Sbjct: 181 VATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGG 240

Query: 241 KDKLVVLWSIQDHITTSATDPAASKSPGPGGSIIKKAGETNDKASDGPSVGPRGVYHGHE 300
           KDKLVVLWSIQDHITTSATD  ASKSPG GGSIIKK GE NDKASDGPS+GPRGVYHGHE
Sbjct: 241 KDKLVVLWSIQDHITTSATDAGASKSPGSGGSIIKKPGEANDKASDGPSIGPRGVYHGHE 300

Query: 301 DTVEDVTFCPSNAQEFCSVGDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDDNL 360
           DTVEDVTFCPSNAQEFCSVGDDSCLILWDAR GS PAVKVEKAHNADLHCVDWNPHDDNL
Sbjct: 301 DTVEDVTFCPSNAQEFCSVGDDSCLILWDARTGSSPAVKVEKAHNADLHCVDWNPHDDNL 360

Query: 361 IITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLN 420
           IITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLN
Sbjct: 361 IITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLN 420

Query: 421 IWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGG 480
           IWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNA+DPWTVVSVSDDCDTTGG
Sbjct: 421 IWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNAADPWTVVSVSDDCDTTGG 480

Query: 481 GGTLQIWRMSDLIYRPEDEVLAELEKFKSHVIECAAKP 511
           GGTLQIWRMSDLIYRPE+EVLAELEKFKSHVIECAAKP
Sbjct: 481 GGTLQIWRMSDLIYRPEEEVLAELEKFKSHVIECAAKP 518

[Close]

BLAST of MS023090 vs. NCBI nr
Match: XP_008450857.1 (PREDICTED: WD-40 repeat-containing protein MSI4 [Cucumis melo])

HSP 1 Score: 1008.4 bits (2606), Expect = 2.1e-290
Identity = 494/518 (95.37%), Postives = 499/518 (96.33%), Query Frame = 0


Query: 1   MDSSQPQQQQQQPQPPQQQ-----PQ---PVVKKKETRGRKPKPKDEKKDEQLAKKMKAQ 60
           MDSSQPQQQQQQ QPPQQQ     PQ   PVVKKKETRGRKPKPKDEKKDEQ  KKMKAQ
Sbjct: 1   MDSSQPQQQQQQQQPPQQQQTPPPPQQQTPVVKKKETRGRKPKPKDEKKDEQQTKKMKAQ 60

Query: 61  HQPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDG 120
            QPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDG
Sbjct: 61  QQPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDG 120

Query: 121 SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARI 180
           SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQN+RI
Sbjct: 121 SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRI 180

Query: 181 VATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGG 240
           VATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGG
Sbjct: 181 VATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGG 240

Query: 241 KDKLVVLWSIQDHITTSATDPAASKSPGPGGSIIKKAGETNDKASDGPSVGPRGVYHGHE 300
           KDKLVVLWSIQDHITTSAT+  ASKSPG GGSIIKK GE NDKASDGPS+GPRGVYHGHE
Sbjct: 241 KDKLVVLWSIQDHITTSATEAGASKSPGSGGSIIKKPGEANDKASDGPSIGPRGVYHGHE 300

Query: 301 DTVEDVTFCPSNAQEFCSVGDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDDNL 360
           DTVEDVTFCPSNAQEFCSVGDDSCLILWDAR GS PAVKVEKAHNADLHCVDWNPHDDNL
Sbjct: 301 DTVEDVTFCPSNAQEFCSVGDDSCLILWDARTGSSPAVKVEKAHNADLHCVDWNPHDDNL 360

Query: 361 IITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLN 420
           IITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLN
Sbjct: 361 IITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLN 420

Query: 421 IWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGG 480
           IWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNA+DPWTVVSVSDDCDTTGG
Sbjct: 421 IWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNAADPWTVVSVSDDCDTTGG 480

Query: 481 GGTLQIWRMSDLIYRPEDEVLAELEKFKSHVIECAAKP 511
           GGTLQIWRMSDLIYRPE+EVLAELEKFKSHVIECAAKP
Sbjct: 481 GGTLQIWRMSDLIYRPEEEVLAELEKFKSHVIECAAKP 518

[Close]

BLAST of MS023090 vs. NCBI nr
Match: TYK10086.1 (WD-40 repeat-containing protein MSI4 [Cucumis melo var. makuwa])

HSP 1 Score: 1008.1 bits (2605), Expect = 2.8e-290
Identity = 493/518 (95.17%), Postives = 499/518 (96.33%), Query Frame = 0


Query: 1   MDSSQPQQQQQQPQPPQQQ-----PQ---PVVKKKETRGRKPKPKDEKKDEQLAKKMKAQ 60
           MDSSQPQQQQQQ QPPQQQ     PQ   PVVKKKETRGRKPKPKDEKKDEQ  KKMKAQ
Sbjct: 1   MDSSQPQQQQQQQQPPQQQQTPPPPQQQTPVVKKKETRGRKPKPKDEKKDEQQTKKMKAQ 60

Query: 61  HQPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDG 120
            QPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDG
Sbjct: 61  QQPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDG 120

Query: 121 SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARI 180
           SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQN+RI
Sbjct: 121 SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRI 180

Query: 181 VATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGG 240
           VATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGG
Sbjct: 181 VATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGG 240

Query: 241 KDKLVVLWSIQDHITTSATDPAASKSPGPGGSIIKKAGETNDKASDGPSVGPRGVYHGHE 300
           KDKLVVLWSIQDHITTSAT+  ASKSPG GGSIIKK GE NDKASDGPS+GPRGVYHGHE
Sbjct: 241 KDKLVVLWSIQDHITTSATEAGASKSPGSGGSIIKKPGEANDKASDGPSIGPRGVYHGHE 300

Query: 301 DTVEDVTFCPSNAQEFCSVGDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDDNL 360
           DTVEDVTFCPSNAQEFCSVGDDSCLILWDAR GS PAVKVEKAHNADLHCVDWNPHDDNL
Sbjct: 301 DTVEDVTFCPSNAQEFCSVGDDSCLILWDARTGSSPAVKVEKAHNADLHCVDWNPHDDNL 360

Query: 361 IITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLN 420
           IITGSADNSIRLFDRRNLTSNG+GSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLN
Sbjct: 361 IITGSADNSIRLFDRRNLTSNGIGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLN 420

Query: 421 IWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGG 480
           IWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNA+DPWTVVSVSDDCDTTGG
Sbjct: 421 IWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNAADPWTVVSVSDDCDTTGG 480

Query: 481 GGTLQIWRMSDLIYRPEDEVLAELEKFKSHVIECAAKP 511
           GGTLQIWRMSDLIYRPE+EVLAELEKFKSHVIECAAKP
Sbjct: 481 GGTLQIWRMSDLIYRPEEEVLAELEKFKSHVIECAAKP 518

[Close]

BLAST of MS023090 vs. ExPASy Swiss-Prot
Match: O22607 (WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana OX=3702 GN=MSI4 PE=1 SV=3)

HSP 1 Score: 844.7 bits (2181), Expect = 5.3e-244
Identity = 404/490 (82.45%), Postives = 439/490 (89.59%), Query Frame = 0


Query: 30  RGRKPKPKDEKK----DEQLAKKM-----KAQHQPSVDERYTQWKSLVPVLYDWFANHNL 89
           RGRKPK K++ +     +Q   KM     K Q  PSVDE+Y+QWK LVP+LYDW ANHNL
Sbjct: 28  RGRKPKTKEDSQTPSSQQQSDVKMKESGKKTQQSPSVDEKYSQWKGLVPILYDWLANHNL 87

Query: 90  VWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFN 149
           VWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFN
Sbjct: 88  VWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFN 147

Query: 150 EEARSPFVKKYKTIIHPGEVNRIRELPQNARIVATHTDSPDVLIWDVEAQPNRHAVLGAT 209
           EEARSPFVKKYKTIIHPGEVNRIRELPQN++IVATHTDSPDVLIWDVE QPNRHAVLGA 
Sbjct: 148 EEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAA 207

Query: 210 NSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKLVVLWSIQDHITTSATDPAASKSPG 269
           NSRPDLILTGHQ+NAEFALAMCPTEP+VLSGGKDK VVLWSIQDHITT  TD  +S    
Sbjct: 208 NSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITTIGTDSKSS---- 267

Query: 270 PGGSIIKKAGETNDKASDGPSVGPRGVYHGHEDTVEDVTFCPSNAQEFCSVGDDSCLILW 329
             GSIIK+ GE  DK ++ P+VGPRGVYHGHEDTVEDV F P++AQEFCSVGDDSCLILW
Sbjct: 268 --GSIIKQTGEGTDK-NESPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILW 327

Query: 330 DARAGSGPAVKVEKAHNADLHCVDWNPHDDNLIITGSADNSIRLFDRRNLTSNGVGSPIY 389
           DAR G+ P  KVEKAH+ADLHCVDWNPHDDNLI+TGSADN++RLFDRR LT+NGVGSPIY
Sbjct: 328 DARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIY 387

Query: 390 KFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVGKKTERATRTPAAPPGLFFQH 449
           KFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYD+V KK++RA ++PA   GLFFQH
Sbjct: 388 KFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSKKSDRAAKSPA---GLFFQH 447

Query: 450 AGHRDKVVDFHWNASDPWTVVSVSDDCDTTGGGGTLQIWRMSDLIYRPEDEVLAELEKFK 509
           AGHRDKVVDFHWNASDPWT+VSVSDDC+TTGGGGTLQIWRMSDLIYRPE+EV+AELEKFK
Sbjct: 448 AGHRDKVVDFHWNASDPWTIVSVSDDCETTGGGGTLQIWRMSDLIYRPEEEVVAELEKFK 507

Query: 510 SHVIECAAKP 511
           SHV+ CA+KP
Sbjct: 508 SHVMTCASKP 507

[Close]

BLAST of MS023090 vs. ExPASy Swiss-Prot
Match: Q9SU78 (WD-40 repeat-containing protein MSI5 OS=Arabidopsis thaliana OX=3702 GN=MSI5 PE=1 SV=2)

HSP 1 Score: 733.0 bits (1891), Expect = 2.3e-210
Identity = 358/498 (71.89%), Postives = 417/498 (83.73%), Query Frame = 0


Query: 12  QPQPPQQQPQPVVKKKETRGRKPKPKDEKKDEQLAKKMKAQHQPSVDERYTQWKSLVPVL 71
           Q   P++ P+  V    T  R+ KPK    + QL   ++   + +VD+ Y+QWK+L+P+L
Sbjct: 10  QATRPRRAPRTPVTAILTDKRRRKPK-SNNESQLPFLLQQSQKATVDDTYSQWKTLLPIL 69

Query: 72  YDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVA 131
           YD F NH LVWPSLSCRWGPQLEQA  K  QRLYLSEQT+GSVPNTLVIANCE V     
Sbjct: 70  YDSFVNHTLVWPSLSCRWGPQLEQAGSKT-QRLYLSEQTNGSVPNTLVIANCETVN---- 129

Query: 132 AAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARIVATHTDSPDVLIWDVEAQP 191
                 Q NE+A SPFVKKYKTIIHPGEVNRIRELPQN++IVATHTDSPD+LIW+ E QP
Sbjct: 130 -----RQLNEKAHSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDILIWNTETQP 189

Query: 192 NRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKLVVLWSIQDHITTSAT 251
           +R+AVLGA +SRPDL+L GHQ++AEFALAMCPTEP+VLSGGKDK V+LW+IQDHIT + +
Sbjct: 190 DRYAVLGAPDSRPDLLLIGHQDDAEFALAMCPTEPFVLSGGKDKSVILWNIQDHITMAGS 249

Query: 252 DPAASKSPGPGGSIIKKAGETNDKASDGPSVGPRGVYHGHEDTVEDVTFCPSNAQEFCSV 311
           D   SKSP   GS  K+ GE +DK + GPSVGPRG+Y+GH+DTVEDV FCPS+AQEFCSV
Sbjct: 250 D---SKSP---GSSFKQTGEGSDK-TGGPSVGPRGIYNGHKDTVEDVAFCPSSAQEFCSV 309

Query: 312 GDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDDNLIITGSADNSIRLFDRRNLT 371
           GDDSCL+LWDAR G+ PA+KVEKAH+ADLHCVDWNPHD+NLI+TGSADN++R+FDRRNLT
Sbjct: 310 GDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLT 369

Query: 372 SNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVGKKTERATRTPA 431
           SNGVGSP+YKFEGH+AAVLCVQWSPDKSSVFGSSAEDGLLNIWD D+VGKK+ERAT+T  
Sbjct: 370 SNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGKKSERATKT-- 429

Query: 432 APPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGGGGTLQIWRMSDLIYRPEDE 491
            P GLFFQHAGHRDKVVDFHW+  +PWT+VSVSD+C++ GGGGTLQIWRMSDLIYRPEDE
Sbjct: 430 -PDGLFFQHAGHRDKVVDFHWSLLNPWTIVSVSDNCESIGGGGTLQIWRMSDLIYRPEDE 486

Query: 492 VLAELEKFKSHVIECAAK 510
           VL ELEKFKSHV  C +K
Sbjct: 490 VLTELEKFKSHVFTCTSK 486

[Close]

BLAST of MS023090 vs. ExPASy Swiss-Prot
Match: Q3MHL3 (Histone-binding protein RBBP4 OS=Bos taurus OX=9913 GN=RBBP4 PE=1 SV=3)

HSP 1 Score: 239.6 bits (610), Expect = 7.9e-62
Identity = 150/447 (33.56%), Postives = 222/447 (49.66%), Query Frame = 0


Query: 57  VDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYK--NRQRLYLSEQTDGSV 116
           ++E Y  WK   P LYD    H L WPSL+ +W P + +   K  +  RL L   T    
Sbjct: 17  INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE- 76

Query: 117 PNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKYKTIIHPGEVNRIREL 176
            N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +
Sbjct: 77  QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 136

Query: 177 PQNARIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPT-E 236
           PQN  I+AT T S DVL++D    P++    G  N  PDL L GHQ+   + L+  P   
Sbjct: 137 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEG-YGLSWNPNLS 196

Query: 237 PYVLSGGKDKLVVLWSIQDHITTSATDPAASKSPGPGGSIIKKAGETNDKASDGPSVGPR 296
            ++LS   D  + LW I                     S + K G+          V  +
Sbjct: 197 GHLLSASDDHTICLWDI---------------------SAVPKEGKV---------VDAK 256

Query: 297 GVYHGHEDTVEDVTFCPSNAQEFCSVGDDSCLILWDARAG--SGPAVKVEKAHNADLHCV 356
            ++ GH   VEDV++   +   F SV DD  L++WD R+   S P+  V+ AH A+++C+
Sbjct: 257 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCL 316

Query: 357 DWNPHDDNLIITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFG 416
            +NP+ + ++ TGSAD ++ L+D RNL        ++ FE HK  +  VQWSP   ++  
Sbjct: 317 SFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILA 376

Query: 417 SSAEDGLLNIWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSV 476
           SS  D  LN+WD  K+G++ +        PP L F H GH  K+ DF WN ++PW + SV
Sbjct: 377 SSGTDRRLNVWDLSKIGEE-QSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 413

Query: 477 SDDCDTTGGGGTLQIWRMSDLIYRPED 491
           S+D         +Q+W+M++ IY  ED
Sbjct: 437 SED-------NIMQVWQMAENIYNDED 413

[Close]

BLAST of MS023090 vs. ExPASy Swiss-Prot
Match: Q09028 (Histone-binding protein RBBP4 OS=Homo sapiens OX=9606 GN=RBBP4 PE=1 SV=3)

HSP 1 Score: 239.6 bits (610), Expect = 7.9e-62
Identity = 150/447 (33.56%), Postives = 222/447 (49.66%), Query Frame = 0


Query: 57  VDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYK--NRQRLYLSEQTDGSV 116
           ++E Y  WK   P LYD    H L WPSL+ +W P + +   K  +  RL L   T    
Sbjct: 17  INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE- 76

Query: 117 PNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKYKTIIHPGEVNRIREL 176
            N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +
Sbjct: 77  QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 136

Query: 177 PQNARIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPT-E 236
           PQN  I+AT T S DVL++D    P++    G  N  PDL L GHQ+   + L+  P   
Sbjct: 137 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEG-YGLSWNPNLS 196

Query: 237 PYVLSGGKDKLVVLWSIQDHITTSATDPAASKSPGPGGSIIKKAGETNDKASDGPSVGPR 296
            ++LS   D  + LW I                     S + K G+          V  +
Sbjct: 197 GHLLSASDDHTICLWDI---------------------SAVPKEGKV---------VDAK 256

Query: 297 GVYHGHEDTVEDVTFCPSNAQEFCSVGDDSCLILWDARAG--SGPAVKVEKAHNADLHCV 356
            ++ GH   VEDV++   +   F SV DD  L++WD R+   S P+  V+ AH A+++C+
Sbjct: 257 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCL 316

Query: 357 DWNPHDDNLIITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFG 416
            +NP+ + ++ TGSAD ++ L+D RNL        ++ FE HK  +  VQWSP   ++  
Sbjct: 317 SFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILA 376

Query: 417 SSAEDGLLNIWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSV 476
           SS  D  LN+WD  K+G++ +        PP L F H GH  K+ DF WN ++PW + SV
Sbjct: 377 SSGTDRRLNVWDLSKIGEE-QSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 413

Query: 477 SDDCDTTGGGGTLQIWRMSDLIYRPED 491
           S+D         +Q+W+M++ IY  ED
Sbjct: 437 SED-------NIMQVWQMAENIYNDED 413

[Close]

BLAST of MS023090 vs. ExPASy Swiss-Prot
Match: Q60972 (Histone-binding protein RBBP4 OS=Mus musculus OX=10090 GN=Rbbp4 PE=1 SV=5)

HSP 1 Score: 239.6 bits (610), Expect = 7.9e-62
Identity = 150/447 (33.56%), Postives = 222/447 (49.66%), Query Frame = 0


Query: 57  VDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYK--NRQRLYLSEQTDGSV 116
           ++E Y  WK   P LYD    H L WPSL+ +W P + +   K  +  RL L   T    
Sbjct: 17  INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE- 76

Query: 117 PNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKYKTIIHPGEVNRIREL 176
            N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +
Sbjct: 77  QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 136

Query: 177 PQNARIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPT-E 236
           PQN  I+AT T S DVL++D    P++    G  N  PDL L GHQ+   + L+  P   
Sbjct: 137 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECN--PDLRLRGHQKEG-YGLSWNPNLS 196

Query: 237 PYVLSGGKDKLVVLWSIQDHITTSATDPAASKSPGPGGSIIKKAGETNDKASDGPSVGPR 296
            ++LS   D  + LW I                     S + K G+          V  +
Sbjct: 197 GHLLSASDDHTICLWDI---------------------SAVPKEGKV---------VDAK 256

Query: 297 GVYHGHEDTVEDVTFCPSNAQEFCSVGDDSCLILWDARAG--SGPAVKVEKAHNADLHCV 356
            ++ GH   VEDV++   +   F SV DD  L++WD R+   S P+  V+ AH A+++C+
Sbjct: 257 TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVD-AHTAEVNCL 316

Query: 357 DWNPHDDNLIITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFG 416
            +NP+ + ++ TGSAD ++ L+D RNL        ++ FE HK  +  VQWSP   ++  
Sbjct: 317 SFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILA 376

Query: 417 SSAEDGLLNIWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSV 476
           SS  D  LN+WD  K+G++ +        PP L F H GH  K+ DF WN ++PW + SV
Sbjct: 377 SSGTDRRLNVWDLSKIGEE-QSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 413

Query: 477 SDDCDTTGGGGTLQIWRMSDLIYRPED 491
           S+D         +Q+W+M++ IY  ED
Sbjct: 437 SED-------NIMQVWQMAENIYNDED 413

[Close]

BLAST of MS023090 vs. ExPASy TrEMBL
Match: A0A6J1D211 (WD-40 repeat-containing protein MSI4-like OS=Momordica charantia OX=3673 GN=LOC111016569 PE=3 SV=1)

HSP 1 Score: 1048.1 bits (2709), Expect = 1.2e-302
Identity = 509/510 (99.80%), Postives = 509/510 (99.80%), Query Frame = 0


Query: 1   MDSSQPQQQQQQPQPPQQQPQPVVKKKETRGRKPKPKDEKKDEQLAKKMKAQHQPSVDER 60
           MDSSQPQQQQQQPQPPQQQPQPVVKKKETRGRKPKPKDEKKDEQLAKKMKAQHQPSVDER
Sbjct: 1   MDSSQPQQQQQQPQPPQQQPQPVVKKKETRGRKPKPKDEKKDEQLAKKMKAQHQPSVDER 60

Query: 61  YTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVI 120
           YTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVI
Sbjct: 61  YTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVI 120

Query: 121 ANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARIVATHTDSP 180
           ANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARIVATHTDSP
Sbjct: 121 ANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARIVATHTDSP 180

Query: 181 DVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKLVVLW 240
           DVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKLVVLW
Sbjct: 181 DVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKLVVLW 240

Query: 241 SIQDHITTSATDPAASKSPGPGGSIIKKAGETNDKASDGPSVGPRGVYHGHEDTVEDVTF 300
           SIQDHITTSATDPAASKSPG GGSIIKKAGETNDKASDGPSVGPRGVYHGHEDTVEDVTF
Sbjct: 241 SIQDHITTSATDPAASKSPGSGGSIIKKAGETNDKASDGPSVGPRGVYHGHEDTVEDVTF 300

Query: 301 CPSNAQEFCSVGDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDDNLIITGSADN 360
           CPSNAQEFCSVGDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDDNLIITGSADN
Sbjct: 301 CPSNAQEFCSVGDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDDNLIITGSADN 360

Query: 361 SIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVG 420
           SIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVG
Sbjct: 361 SIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVG 420

Query: 421 KKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGGGGTLQIWR 480
           KKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGGGGTLQIWR
Sbjct: 421 KKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGGGGTLQIWR 480

Query: 481 MSDLIYRPEDEVLAELEKFKSHVIECAAKP 511
           MSDLIYRPEDEVLAELEKFKSHVIECAAKP
Sbjct: 481 MSDLIYRPEDEVLAELEKFKSHVIECAAKP 510

[Close]

BLAST of MS023090 vs. ExPASy TrEMBL
Match: A0A1S3BPL6 (WD-40 repeat-containing protein MSI4 OS=Cucumis melo OX=3656 GN=LOC103492327 PE=3 SV=1)

HSP 1 Score: 1008.4 bits (2606), Expect = 1.0e-290
Identity = 494/518 (95.37%), Postives = 499/518 (96.33%), Query Frame = 0


Query: 1   MDSSQPQQQQQQPQPPQQQ-----PQ---PVVKKKETRGRKPKPKDEKKDEQLAKKMKAQ 60
           MDSSQPQQQQQQ QPPQQQ     PQ   PVVKKKETRGRKPKPKDEKKDEQ  KKMKAQ
Sbjct: 1   MDSSQPQQQQQQQQPPQQQQTPPPPQQQTPVVKKKETRGRKPKPKDEKKDEQQTKKMKAQ 60

Query: 61  HQPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDG 120
            QPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDG
Sbjct: 61  QQPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDG 120

Query: 121 SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARI 180
           SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQN+RI
Sbjct: 121 SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRI 180

Query: 181 VATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGG 240
           VATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGG
Sbjct: 181 VATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGG 240

Query: 241 KDKLVVLWSIQDHITTSATDPAASKSPGPGGSIIKKAGETNDKASDGPSVGPRGVYHGHE 300
           KDKLVVLWSIQDHITTSAT+  ASKSPG GGSIIKK GE NDKASDGPS+GPRGVYHGHE
Sbjct: 241 KDKLVVLWSIQDHITTSATEAGASKSPGSGGSIIKKPGEANDKASDGPSIGPRGVYHGHE 300

Query: 301 DTVEDVTFCPSNAQEFCSVGDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDDNL 360
           DTVEDVTFCPSNAQEFCSVGDDSCLILWDAR GS PAVKVEKAHNADLHCVDWNPHDDNL
Sbjct: 301 DTVEDVTFCPSNAQEFCSVGDDSCLILWDARTGSSPAVKVEKAHNADLHCVDWNPHDDNL 360

Query: 361 IITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLN 420
           IITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLN
Sbjct: 361 IITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLN 420

Query: 421 IWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGG 480
           IWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNA+DPWTVVSVSDDCDTTGG
Sbjct: 421 IWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNAADPWTVVSVSDDCDTTGG 480

Query: 481 GGTLQIWRMSDLIYRPEDEVLAELEKFKSHVIECAAKP 511
           GGTLQIWRMSDLIYRPE+EVLAELEKFKSHVIECAAKP
Sbjct: 481 GGTLQIWRMSDLIYRPEEEVLAELEKFKSHVIECAAKP 518

[Close]

BLAST of MS023090 vs. ExPASy TrEMBL
Match: A0A5D3CI55 (WD-40 repeat-containing protein MSI4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002260 PE=3 SV=1)

HSP 1 Score: 1008.1 bits (2605), Expect = 1.3e-290
Identity = 493/518 (95.17%), Postives = 499/518 (96.33%), Query Frame = 0


Query: 1   MDSSQPQQQQQQPQPPQQQ-----PQ---PVVKKKETRGRKPKPKDEKKDEQLAKKMKAQ 60
           MDSSQPQQQQQQ QPPQQQ     PQ   PVVKKKETRGRKPKPKDEKKDEQ  KKMKAQ
Sbjct: 1   MDSSQPQQQQQQQQPPQQQQTPPPPQQQTPVVKKKETRGRKPKPKDEKKDEQQTKKMKAQ 60

Query: 61  HQPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDG 120
            QPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDG
Sbjct: 61  QQPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDG 120

Query: 121 SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARI 180
           SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQN+RI
Sbjct: 121 SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRI 180

Query: 181 VATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGG 240
           VATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGG
Sbjct: 181 VATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGG 240

Query: 241 KDKLVVLWSIQDHITTSATDPAASKSPGPGGSIIKKAGETNDKASDGPSVGPRGVYHGHE 300
           KDKLVVLWSIQDHITTSAT+  ASKSPG GGSIIKK GE NDKASDGPS+GPRGVYHGHE
Sbjct: 241 KDKLVVLWSIQDHITTSATEAGASKSPGSGGSIIKKPGEANDKASDGPSIGPRGVYHGHE 300

Query: 301 DTVEDVTFCPSNAQEFCSVGDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDDNL 360
           DTVEDVTFCPSNAQEFCSVGDDSCLILWDAR GS PAVKVEKAHNADLHCVDWNPHDDNL
Sbjct: 301 DTVEDVTFCPSNAQEFCSVGDDSCLILWDARTGSSPAVKVEKAHNADLHCVDWNPHDDNL 360

Query: 361 IITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLN 420
           IITGSADNSIRLFDRRNLTSNG+GSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLN
Sbjct: 361 IITGSADNSIRLFDRRNLTSNGIGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLN 420

Query: 421 IWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGG 480
           IWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNA+DPWTVVSVSDDCDTTGG
Sbjct: 421 IWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNAADPWTVVSVSDDCDTTGG 480

Query: 481 GGTLQIWRMSDLIYRPEDEVLAELEKFKSHVIECAAKP 511
           GGTLQIWRMSDLIYRPE+EVLAELEKFKSHVIECAAKP
Sbjct: 481 GGTLQIWRMSDLIYRPEEEVLAELEKFKSHVIECAAKP 518

[Close]

BLAST of MS023090 vs. ExPASy TrEMBL
Match: A0A6J1HUE9 (WD-40 repeat-containing protein MSI4 OS=Cucurbita maxima OX=3661 GN=LOC111466808 PE=3 SV=1)

HSP 1 Score: 1004.2 bits (2595), Expect = 1.9e-289
Identity = 491/514 (95.53%), Postives = 499/514 (97.08%), Query Frame = 0


Query: 1   MDSSQPQQQQQQPQPPQQQP----QPVVKKKETRGRKPKPKDEKKDEQLAKKMKAQHQPS 60
           MDSSQ QQQQQQ QP QQQP    QPVVKKKETRGRKPKPK+EKKDEQ AKKMKAQ QPS
Sbjct: 1   MDSSQSQQQQQQ-QPQQQQPQLQQQPVVKKKETRGRKPKPKEEKKDEQQAKKMKAQQQPS 60

Query: 61  VDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPN 120
           VDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPN
Sbjct: 61  VDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPN 120

Query: 121 TLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARIVATH 180
           TLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARIVATH
Sbjct: 121 TLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARIVATH 180

Query: 181 TDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKL 240
           TDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKL
Sbjct: 181 TDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKL 240

Query: 241 VVLWSIQDHITTSATDPAASKSPGPGGSIIKKAGETNDKASDGPSVGPRGVYHGHEDTVE 300
           VVLWSIQDHITT+A+D AASKSPG GGSIIKKAGE NDK ++GPS+GPRGVYHGHEDTVE
Sbjct: 241 VVLWSIQDHITTAASDAAASKSPGSGGSIIKKAGEANDKTAEGPSIGPRGVYHGHEDTVE 300

Query: 301 DVTFCPSNAQEFCSVGDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDDNLIITG 360
           DVTFCPSNAQEFCSVGDDSCLILWDAR G+ PAVKVEKAHNADLHCVDWNPHDDNLIITG
Sbjct: 301 DVTFCPSNAQEFCSVGDDSCLILWDARTGTSPAVKVEKAHNADLHCVDWNPHDDNLIITG 360

Query: 361 SADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 420
           SADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY
Sbjct: 361 SADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 420

Query: 421 DKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGGGGTL 480
           DKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWT+VSVSDDCDTTGGGGTL
Sbjct: 421 DKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTLVSVSDDCDTTGGGGTL 480

Query: 481 QIWRMSDLIYRPEDEVLAELEKFKSHVIECAAKP 511
           QIWRMSDLIYRPEDEVLAELEKFKSHVIECAAKP
Sbjct: 481 QIWRMSDLIYRPEDEVLAELEKFKSHVIECAAKP 513

[Close]

BLAST of MS023090 vs. ExPASy TrEMBL
Match: A0A6J1H857 (WD-40 repeat-containing protein MSI4 OS=Cucurbita moschata OX=3662 GN=LOC111461417 PE=3 SV=1)

HSP 1 Score: 1003.8 bits (2594), Expect = 2.5e-289
Identity = 488/510 (95.69%), Postives = 493/510 (96.67%), Query Frame = 0


Query: 1   MDSSQPQQQQQQPQPPQQQPQPVVKKKETRGRKPKPKDEKKDEQLAKKMKAQHQPSVDER 60
           MDS Q QQQQQ  Q  QQQ QPVVKKKETRGRKPKPK+EKKDEQ AKKMKA  QPSVDER
Sbjct: 1   MDSPQSQQQQQLQQQQQQQQQPVVKKKETRGRKPKPKEEKKDEQQAKKMKAHQQPSVDER 60

Query: 61  YTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVI 120
           YTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVI
Sbjct: 61  YTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVI 120

Query: 121 ANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARIVATHTDSP 180
           ANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQN+RIVATHTDSP
Sbjct: 121 ANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRIVATHTDSP 180

Query: 181 DVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKLVVLW 240
           DVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKLVVLW
Sbjct: 181 DVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKLVVLW 240

Query: 241 SIQDHITTSATDPAASKSPGPGGSIIKKAGETNDKASDGPSVGPRGVYHGHEDTVEDVTF 300
           SIQDHITTSATDPA SKSPG GGSIIKKAGE  DK SDGPS+GPRGVYHGHEDTVEDVTF
Sbjct: 241 SIQDHITTSATDPAVSKSPGSGGSIIKKAGEGTDKTSDGPSIGPRGVYHGHEDTVEDVTF 300

Query: 301 CPSNAQEFCSVGDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDDNLIITGSADN 360
           CPSNAQEFCSVGDDSCLILWDAR GS PAVKVEKAHNADLHCVDWNPHDDNLIITGSADN
Sbjct: 301 CPSNAQEFCSVGDDSCLILWDARTGSSPAVKVEKAHNADLHCVDWNPHDDNLIITGSADN 360

Query: 361 SIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVG 420
           SIR+FDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVG
Sbjct: 361 SIRMFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVG 420

Query: 421 KKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGGGGTLQIWR 480
           KKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNA+DPWTVVSVSDDCDTTGGGGTLQIWR
Sbjct: 421 KKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNAADPWTVVSVSDDCDTTGGGGTLQIWR 480

Query: 481 MSDLIYRPEDEVLAELEKFKSHVIECAAKP 511
           MSDLIYRPEDEVLAELEKFKSHVIECAAKP
Sbjct: 481 MSDLIYRPEDEVLAELEKFKSHVIECAAKP 510

[Close]

BLAST of MS023090 vs. TAIR 10
Match: AT2G19520.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 844.7 bits (2181), Expect = 3.8e-245
Identity = 404/490 (82.45%), Postives = 439/490 (89.59%), Query Frame = 0


Query: 30  RGRKPKPKDEKK----DEQLAKKM-----KAQHQPSVDERYTQWKSLVPVLYDWFANHNL 89
           RGRKPK K++ +     +Q   KM     K Q  PSVDE+Y+QWK LVP+LYDW ANHNL
Sbjct: 28  RGRKPKTKEDSQTPSSQQQSDVKMKESGKKTQQSPSVDEKYSQWKGLVPILYDWLANHNL 87

Query: 90  VWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFN 149
           VWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFN
Sbjct: 88  VWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFN 147

Query: 150 EEARSPFVKKYKTIIHPGEVNRIRELPQNARIVATHTDSPDVLIWDVEAQPNRHAVLGAT 209
           EEARSPFVKKYKTIIHPGEVNRIRELPQN++IVATHTDSPDVLIWDVE QPNRHAVLGA 
Sbjct: 148 EEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAA 207

Query: 210 NSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKLVVLWSIQDHITTSATDPAASKSPG 269
           NSRPDLILTGHQ+NAEFALAMCPTEP+VLSGGKDK VVLWSIQDHITT  TD  +S    
Sbjct: 208 NSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITTIGTDSKSS---- 267

Query: 270 PGGSIIKKAGETNDKASDGPSVGPRGVYHGHEDTVEDVTFCPSNAQEFCSVGDDSCLILW 329
             GSIIK+ GE  DK ++ P+VGPRGVYHGHEDTVEDV F P++AQEFCSVGDDSCLILW
Sbjct: 268 --GSIIKQTGEGTDK-NESPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILW 327

Query: 330 DARAGSGPAVKVEKAHNADLHCVDWNPHDDNLIITGSADNSIRLFDRRNLTSNGVGSPIY 389
           DAR G+ P  KVEKAH+ADLHCVDWNPHDDNLI+TGSADN++RLFDRR LT+NGVGSPIY
Sbjct: 328 DARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIY 387

Query: 390 KFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVGKKTERATRTPAAPPGLFFQH 449
           KFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYD+V KK++RA ++PA   GLFFQH
Sbjct: 388 KFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSKKSDRAAKSPA---GLFFQH 447

Query: 450 AGHRDKVVDFHWNASDPWTVVSVSDDCDTTGGGGTLQIWRMSDLIYRPEDEVLAELEKFK 509
           AGHRDKVVDFHWNASDPWT+VSVSDDC+TTGGGGTLQIWRMSDLIYRPE+EV+AELEKFK
Sbjct: 448 AGHRDKVVDFHWNASDPWTIVSVSDDCETTGGGGTLQIWRMSDLIYRPEEEVVAELEKFK 507

Query: 510 SHVIECAAKP 511
           SHV+ CA+KP
Sbjct: 508 SHVMTCASKP 507

[Close]

BLAST of MS023090 vs. TAIR 10
Match: AT4G29730.1 (nucleosome/chromatin assembly factor group C5 )

HSP 1 Score: 733.0 bits (1891), Expect = 1.6e-211
Identity = 358/498 (71.89%), Postives = 417/498 (83.73%), Query Frame = 0


Query: 12  QPQPPQQQPQPVVKKKETRGRKPKPKDEKKDEQLAKKMKAQHQPSVDERYTQWKSLVPVL 71
           Q   P++ P+  V    T  R+ KPK    + QL   ++   + +VD+ Y+QWK+L+P+L
Sbjct: 10  QATRPRRAPRTPVTAILTDKRRRKPK-SNNESQLPFLLQQSQKATVDDTYSQWKTLLPIL 69

Query: 72  YDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVA 131
           YD F NH LVWPSLSCRWGPQLEQA  K  QRLYLSEQT+GSVPNTLVIANCE V     
Sbjct: 70  YDSFVNHTLVWPSLSCRWGPQLEQAGSKT-QRLYLSEQTNGSVPNTLVIANCETVN---- 129

Query: 132 AAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARIVATHTDSPDVLIWDVEAQP 191
                 Q NE+A SPFVKKYKTIIHPGEVNRIRELPQN++IVATHTDSPD+LIW+ E QP
Sbjct: 130 -----RQLNEKAHSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDILIWNTETQP 189

Query: 192 NRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKLVVLWSIQDHITTSAT 251
           +R+AVLGA +SRPDL+L GHQ++AEFALAMCPTEP+VLSGGKDK V+LW+IQDHIT + +
Sbjct: 190 DRYAVLGAPDSRPDLLLIGHQDDAEFALAMCPTEPFVLSGGKDKSVILWNIQDHITMAGS 249

Query: 252 DPAASKSPGPGGSIIKKAGETNDKASDGPSVGPRGVYHGHEDTVEDVTFCPSNAQEFCSV 311
           D   SKSP   GS  K+ GE +DK + GPSVGPRG+Y+GH+DTVEDV FCPS+AQEFCSV
Sbjct: 250 D---SKSP---GSSFKQTGEGSDK-TGGPSVGPRGIYNGHKDTVEDVAFCPSSAQEFCSV 309

Query: 312 GDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDDNLIITGSADNSIRLFDRRNLT 371
           GDDSCL+LWDAR G+ PA+KVEKAH+ADLHCVDWNPHD+NLI+TGSADN++R+FDRRNLT
Sbjct: 310 GDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLT 369

Query: 372 SNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVGKKTERATRTPA 431
           SNGVGSP+YKFEGH+AAVLCVQWSPDKSSVFGSSAEDGLLNIWD D+VGKK+ERAT+T  
Sbjct: 370 SNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGKKSERATKT-- 429

Query: 432 APPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGGGGTLQIWRMSDLIYRPEDE 491
            P GLFFQHAGHRDKVVDFHW+  +PWT+VSVSD+C++ GGGGTLQIWRMSDLIYRPEDE
Sbjct: 430 -PDGLFFQHAGHRDKVVDFHWSLLNPWTIVSVSDNCESIGGGGTLQIWRMSDLIYRPEDE 486

Query: 492 VLAELEKFKSHVIECAAK 510
           VL ELEKFKSHV  C +K
Sbjct: 490 VLTELEKFKSHVFTCTSK 486

[Close]

BLAST of MS023090 vs. TAIR 10
Match: AT2G16780.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 228.0 bits (580), Expect = 1.7e-59
Identity = 139/442 (31.45%), Postives = 216/442 (48.87%), Query Frame = 0


Query: 57  VDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQA----TYKNRQRLYLSEQTDG 116
           V+E ++ WK   P LYD   +H L WPSL+  W P         +Y    +L L   T G
Sbjct: 14  VEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYFGVHKLILGTHTSG 73

Query: 117 SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARI 176
           S  + L++A  +VV P   A   I   N++   P V+  + I   GEVNR R +PQ   +
Sbjct: 74  SAQDFLMVA--DVVTPTPNAEPGIGGANQDPFIPKVEIRQRIRVDGEVNRARCMPQKPTL 133

Query: 177 VATHTDSPDVLIWDVEAQPNRHAVLGATNS-RPDLILTGHQENAEFALAMCP-TEPYVLS 236
           V   T   +V ++D      +HA    T+   PDL L GH +   + L+  P  E Y+LS
Sbjct: 134 VGAKTSGCEVFLFDYA----KHAAKSQTSECDPDLRLVGHDKEG-YGLSWSPFKEGYLLS 193

Query: 237 GGKDKLVVLWSIQDHITTSATDPAASKSPGPGGSIIKKAGETNDKASDGPSVGPRGVYHG 296
           G +D+ + LW +      SAT                      DK      +    VY G
Sbjct: 194 GSQDQKICLWDV------SAT--------------------PQDKV-----LNAMFVYEG 253

Query: 297 HEDTVEDVTFCPSNAQEFCSVGDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDD 356
           HE  + DV++   N   F S G+D  L++WD R  +       K H  +++ + +NP ++
Sbjct: 254 HESAIADVSWHMKNENLFGSAGEDGRLVIWDTR--TNQMQHQVKVHEREVNYLSFNPFNE 313

Query: 357 NLIITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGL 416
            ++ T S+D+++ LFD R L      +P++    H+  V  V+W P+  +V  SS ED  
Sbjct: 314 WVLATASSDSTVALFDLRKL-----NAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRR 373

Query: 417 LNIWDYDKVG-KKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDT 476
           L +WD ++VG ++ E        PP L F H GH+ K+ DF WN ++PW + SV++D   
Sbjct: 374 LMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVAED--- 403

Query: 477 TGGGGTLQIWRMSDLIYRPEDE 492
                +LQ+W+M++ IYR E++
Sbjct: 434 ----NSLQVWQMAESIYRDEED 403

[Close]

BLAST of MS023090 vs. TAIR 10
Match: AT4G35050.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 226.9 bits (577), Expect = 3.8e-59
Identity = 134/440 (30.45%), Postives = 210/440 (47.73%), Query Frame = 0


Query: 57  VDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQ----LEQATYKNRQRLYLSEQTDG 116
           V+E ++ WK   P LYD   +H L WPSL+  W P       +  Y    +L L   T G
Sbjct: 15  VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHKLILGTHTSG 74

Query: 117 SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNARI 176
              + L++A  +VV P   A   +   ++E   P V+  + I   GEVNR R +PQ   +
Sbjct: 75  GAQDFLMVA--DVVIPTPDAEPGLGGRDQEPIVPKVEIKQKIRVDGEVNRARCMPQKPTL 134

Query: 177 VATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGG 236
           V   T   +V ++D      +      +   PDL L GH++           E Y+LSG 
Sbjct: 135 VGAKTSGSEVFLFDYARLSGKPQ---TSECDPDLRLMGHEQEGYGLAWSSFKEGYLLSGS 194

Query: 237 KDKLVVLWSIQDHITTSATDPAASKSPGPGGSIIKKAGETNDKASDGPSVGPRGVYHGHE 296
           +D+ + LW     ++ +ATD                             + P  VY GH+
Sbjct: 195 QDQRICLWD----VSATATDKV---------------------------LNPMHVYEGHQ 254

Query: 297 DTVEDVTFCPSNAQEFCSVGDDSCLILWDARAGSGPAVKVEKAHNADLHCVDWNPHDDNL 356
             +EDV +   N   F S GDD  L++WD R  +       K H  +++ + +NP ++ +
Sbjct: 255 SIIEDVAWHMKNENIFGSAGDDCQLVIWDLR--TNQMQHQVKVHEREINYLSFNPFNEWV 314

Query: 357 IITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLN 416
           + T S+D+++ LFD R LT     +P++    H+  V  V+W P+  +V  SS ED  L 
Sbjct: 315 LATASSDSTVALFDLRKLT-----APLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLM 374

Query: 417 IWDYDKVG-KKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTG 476
           +WD ++VG ++ E        PP L F H GH+ K+ DF WN  +PW + SV++D     
Sbjct: 375 VWDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAED----- 404

Query: 477 GGGTLQIWRMSDLIYRPEDE 492
              +LQ+W+M++ IYR +DE
Sbjct: 435 --NSLQVWQMAESIYREDDE 404

[Close]

BLAST of MS023090 vs. TAIR 10
Match: AT5G58230.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 223.0 bits (567), Expect = 5.4e-58
Identity = 137/451 (30.38%), Postives = 214/451 (47.45%), Query Frame = 0


Query: 57  VDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNR--QRLYLSEQTDGSV 116
           ++E Y  WK   P LYD    H L WPSL+  W P  E+ + K+   Q++ L   T  S 
Sbjct: 17  INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQKMILGTHTSESE 76

Query: 117 PNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKYKTIIHPGEVNRIRE 176
           PN L++A  +V  P         Q++++ RS F         V+  + I H GEVNR R 
Sbjct: 77  PNYLMLA--QVQLPLDDTESEARQYDDD-RSEFGGFGCATGKVQIIQQINHDGEVNRARY 136

Query: 177 LPQNARIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTE 236
           +PQN  I+AT T + +V ++D    P++  + GA N  PDL L GH             +
Sbjct: 137 MPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACN--PDLKLRGHSSEGYGLSWSKFKQ 196

Query: 237 PYVLSGGKDKLVVLWSIQDHITTSATDPAASKSPGPGGSIIKKAGETNDKASDGPSVGPR 296
            ++LSG  D  + LW I                               +      S+  +
Sbjct: 197 GHLLSGSDDAQICLWDI-------------------------------NATPKNKSLDAQ 256

Query: 297 GVYHGHEDTVEDVTFCPSNAQEFCSVGDDSCLILWDARAGS-GPAVKVEKAHNADLHCVD 356
            ++  HE  VEDV +   +   F SVGDD  L++WD R+ S    V+   AH+ +++C+ 
Sbjct: 257 QIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLA 316

Query: 357 WNPHDDNLIITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGS 416
           +NP ++ ++ TGS D +++LFD R L+     + ++ F+ HK  V  V W+P   ++  S
Sbjct: 317 FNPFNEWVVATGSTDKTVKLFDLRKLS-----TALHTFDSHKEEVFQVGWNPKNETILAS 376

Query: 417 SAEDGLLNIWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNASDPWTVVSVS 476
                 L +WD  ++ ++ +        PP L F H GH  K+ DF WN  + W + SV+
Sbjct: 377 CCLGRRLMVWDLSRIDEE-QTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVA 418

Query: 477 DDCDTTGGGGTLQIWRMSDLIYRPEDEVLAE 496
           +D         LQIW+M++ IY  ED+   E
Sbjct: 437 ED-------NILQIWQMAENIYHDEDDAPGE 418

The following BLAST results are available for this feature:

BLAST of MS023090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147703.1	2.4e-302	99.80	WD-40 repeat-containing protein MSI4-like [Momordica charantia]	[more]
XP_038880551.1	2.5e-291	96.12	WD-40 repeat-containing protein MSI4-like [Benincasa hispida]	[more]
XP_004135716.2	7.3e-291	95.56	WD-40 repeat-containing protein MSI4 [Cucumis sativus] >KGN66623.2 hypothetical ...	[more]
XP_008450857.1	2.1e-290	95.37	PREDICTED: WD-40 repeat-containing protein MSI4 [Cucumis melo]	[more]
TYK10086.1	2.8e-290	95.17	WD-40 repeat-containing protein MSI4 [Cucumis melo var. makuwa]	[more]

BLAST of MS023090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22607	5.3e-244	82.45	WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana OX=3702 GN=MSI4 PE=...	[more]
Q9SU78	2.3e-210	71.89	WD-40 repeat-containing protein MSI5 OS=Arabidopsis thaliana OX=3702 GN=MSI5 PE=...	[more]
Q3MHL3	7.9e-62	33.56	Histone-binding protein RBBP4 OS=Bos taurus OX=9913 GN=RBBP4 PE=1 SV=3	[more]
Q09028	7.9e-62	33.56	Histone-binding protein RBBP4 OS=Homo sapiens OX=9606 GN=RBBP4 PE=1 SV=3	[more]
Q60972	7.9e-62	33.56	Histone-binding protein RBBP4 OS=Mus musculus OX=10090 GN=Rbbp4 PE=1 SV=5	[more]

BLAST of MS023090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D211	1.2e-302	99.80	WD-40 repeat-containing protein MSI4-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A1S3BPL6	1.0e-290	95.37	WD-40 repeat-containing protein MSI4 OS=Cucumis melo OX=3656 GN=LOC103492327 PE=...	[more]
A0A5D3CI55	1.3e-290	95.17	WD-40 repeat-containing protein MSI4 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1HUE9	1.9e-289	95.53	WD-40 repeat-containing protein MSI4 OS=Cucurbita maxima OX=3661 GN=LOC111466808...	[more]
A0A6J1H857	2.5e-289	95.69	WD-40 repeat-containing protein MSI4 OS=Cucurbita moschata OX=3662 GN=LOC1114614...	[more]

BLAST of MS023090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19520.1	3.8e-245	82.45	Transducin family protein / WD-40 repeat family protein	[more]
AT4G29730.1	1.6e-211	71.89	nucleosome/chromatin assembly factor group C5	[more]
AT2G16780.1	1.7e-59	31.45	Transducin family protein / WD-40 repeat family protein	[more]
AT4G35050.1	3.8e-59	30.45	Transducin family protein / WD-40 repeat family protein	[more]
AT5G58230.1	5.4e-58	30.38	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 201..241 e-value: 0.22 score: 20.6 coord: 281..321 e-value: 1.8E-5 score: 34.2 coord: 375..415 e-value: 4.5E-8 score: 42.8 coord: 433..480 e-value: 6.1 score: 12.0 coord: 326..366 e-value: 6.6E-7 score: 39.0
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 286..321 e-value: 0.065 score: 14.1 coord: 376..415 e-value: 1.2E-5 score: 26.0 coord: 334..366 e-value: 8.1E-4 score: 20.2 coord: 207..241 e-value: 0.15 score: 13.0
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 382..415 score: 12.814306
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 333..366 score: 10.642123
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 288..330 score: 9.97376
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 35..498 e-value: 1.8E-114 score: 385.1
IPR022052	Histone-binding protein RBBP4, N-terminal	PFAM	PF12265	CAF1C_H4-bd	coord: 59..124 e-value: 5.2E-17 score: 61.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..289
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..55
None	No IPR available	PANTHER	PTHR22850:SF202	WD-40 REPEAT-CONTAINING PROTEIN MSI4	coord: 38..510
None	No IPR available	PANTHER	PTHR22850	WD40 REPEAT FAMILY	coord: 38..510
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 382..415 score: 10.653776
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 333..366 score: 8.940149
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 146..497

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023090.1	MS023090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding