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MS023062 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGGGCTCAATCATTTCTTAGGAATATTTTGGCGAGCATGGAGGCAGTTTATCTGAGCCGTAATCCCACAGCAAAAGCCATATTGGAGCTTGTTCCATCGGTCGATAATGATAAAATTTGCTACGATCATCTTGCATTTAGGACTTTTGGGGTATTTCCCTCCTCCAAAATTAAGTTAAATTTCCGTTGTTTTCCTTTACTGATCCGGAGTTGGCCCTCACTTCCTTTGTTGTTTATGTTGTCTTGGATAATTTAATTCTTGTTTTTTCAGTTTATGTTTGTTATAAGTCTTGTTAATGTTGAACTTGTGTTTGGGTCTGTGATGAATTAGGTGAATGGCCATGGAATTGATTCGTTAGCAGACTTTTTTCTGGACTTTGGATATACACGACAACAAGAATTGGCATTCCCAGCCAAAAAGCTAAAAGCATTTTGGTTTTCACCTCCAACCATTTCTCAGGCTCCTGATACTGATGATGGTAGTGGAATCAATGGGCCTCTGCCAAGAGTGTTCATATCAGAACTTCTTGTGGATCAGATGAGTCAACAAACTCAGGTGTGTTTTAGGCATTTCTTGACACAGAGGAATCTGCATATTTGCCTGAATGCTTTTTGTTTTGTTCAAACCTTTTGGCTTTGAAATCTGGACAAGAACTTCTGTCTTGGGTTCTCACTTCTCTGGAATATGATTGCAGATACTCATGGTCAATTTATTTATATTGTAACATTGTGGCTCTAGCTTGGACTTGTTTATAAATGAAATGATTGGGGGATTCTGAATAACATAATGTACGGTAGAACTCCATTTTCCAGTATTCCCATCTACCTTTTGTTTCCGTCGAGGGAGAATAAACCATCACTGAACTCAAAAATTTAAACTGAACGATCGAGTAAATCTAATTTATATATGGATATTTCAACCGTTTCGTCACGTGCATTCTAGGAAAGGCCAAAAGGAAAATGTTGTCCTTTGACAGTCAGTTTCCACTGTTCATGTTTGTGATGCAACTGACACATTAATAAATGTGTACAGCCTTTTATGTGTACAGACAATCTTTCCGTGGACAATATCCTAACACTGATCATGTTTAAGAATTGCACCTCAGACCATTAGTTTTGCGTTGGCCTATTTTTTTCGTTCAGCCCATTAGTTTTAAGGTTTTGGTGTGCGCTATTTACTTTTTTTTTTTCCTTTTTTTTTTTGGCTTATACCACACGCAGCTTCATGTACGGGGGGAGAGAACGAAAGGGTTCTTTTCTGCTTGAGTTTTTTAGAGTGAATGTGAGGGTGTTCATCTTGAGTGTGCTGGGGGGTGTGATTCTTACACTATTTCTTAATAAAAGGCTGAGATACTGATCGAAGAGTGGATGTACATTATTGTAAGGTTTGTATAAAGAAGGCAAACAAAGTCCCACGTTGATTAAGGAAGAGAGTGATCCATGGTATATAAGGGAAGATAATTATTTCTATTGGTACGAGCCTTTTTGGATGAAACCAAAAATAAAGTTGTAAGAGTTATGCCCAAAACGGACAATATCATATTATTGTGGAGATACTTAGAGTTTTTGGGATATCGTTGTCCTTGACCCATTATTTCATGATTAGTTCTACAGTGTTGTGTATATACAGCTAGGAACACCGTGAGAATTAGGCATAAGGTAGGATGCATTTTGTGCTTCATTTATGTAGGCAAGTAGATCCCTCTCGTATTTGCTAAGCTTGCGTCGATGAGGTGCTCTTCCACTCCTTGGTCTTATTGATGGTTAATAATTGAGTTGATTTCTAACACCTTTCTTCTCCACATTGGTTTGTTATATATACATATGTAACATAGTCATAACTTGAAGTACTACAAGTTCATATTGTTTTTCATTTTGAATCAGTCCATTATATGGCTAATAATTTTACAGAACTCAATCTTTTAGGTAATTTGATTGAACTTTTTCCTACTGCGTTCAGGAAATAATAAGAAAATACACTGAAAGTTCTCACAATGGAAAGAAGCATGCTGCTCTTGCAAGTGCTCTAGGTTCCTTGACATGGGAAAAGCCTTCGCATTCTGAATTTTTGCAATTAGCGAGGTTCTTAATCGCCATCAACTCCAAAATTTATGTTTTAAAAGTCTCATTTATGGTTTACTACCAGACACATGAACTTGCTAGTTTTTTGTAGCTGAAAGTAATTGTGAAATGTATGCTTTGAGCACCATCCATAACCTCCAATCTCAATGGCTTTTTTTGATCGTAGGGAGAGTGAATATGCTGCCTGGACTCTCGTGAATGGTTATGCGCTTAATCACGTGACTATTTCGACCCATCGTCTGAAATCTTATTTGAAAGATATCAAAAGCCTCAATCAGTTCATCGAGAGGAATGGTTATAAATTGAATTCTGAAGGTGGAGTTTTGAAAGGTATGCAGCACTGCCAGTCATTTCATCTATACTTGTGTTTTGATTATCTATTGTTGATGGTAAGAAGTTAGTAACCAGTCAGCTAAAATGTGAGCACTTGAGCTCACTAATGAACCATTTCATTTTCAGTAAGCCCGGATGGTCTTCTACTGCAAAGTTCAACCCTTGCGGATTCGATTTCTTTCGAATTCTCTGATGGCATTACTACTTCCGTGCCCTGCTCGTACATCGAGTTTGCTGAGCGTTTAATTCTGCCTCAGTATAAACATCTTCCAGAAACAGAGGTAAGTAGGCCCTTTGAGTACTTGGATGAGTTATCTGTTTCTTTTTCTTTTAATATAACATGGGAAGAGGTTTTAGGTGCCAATGACTACCGAGCTATGCTCGTTTTGACATCTATCTTGCTGTTAAAGTCATCAGTTATCTCTTATAATGAAGTGGGACTGATAGAGATCACATGACAATAACAGGTGAAAGAGCACCACAGACGGGATGGATTTGAGGTTGGAAATGCTGATAAGATCTTTGAAAGTACATCCAAACAGCAGCAGACGGCACCGGCT GGGGCTCAATCATTTCTTAGGAATATTTTGGCGAGCATGGAGGCAGTTTATCTGAGCCGTAATCCCACAGCAAAAGCCATATTGGAGCTTGTTCCATCGGTCGATAATGATAAAATTTGCTACGATCATCTTGCATTTAGGACTTTTGGGGTGAATGGCCATGGAATTGATTCGTTAGCAGACTTTTTTCTGGACTTTGGATATACACGACAACAAGAATTGGCATTCCCAGCCAAAAAGCTAAAAGCATTTTGGTTTTCACCTCCAACCATTTCTCAGGCTCCTGATACTGATGATGGTAGTGGAATCAATGGGCCTCTGCCAAGAGTGTTCATATCAGAACTTCTTGTGGATCAGATGAGTCAACAAACTCAGGAAATAATAAGAAAATACACTGAAAGTTCTCACAATGGAAAGAAGCATGCTGCTCTTGCAAGTGCTCTAGGTTCCTTGACATGGGAAAAGCCTTCGCATTCTGAATTTTTGCAATTAGCGAGGGAGAGTGAATATGCTGCCTGGACTCTCGTGAATGGTTATGCGCTTAATCACGTGACTATTTCGACCCATCGTCTGAAATCTTATTTGAAAGATATCAAAAGCCTCAATCAGTTCATCGAGAGGAATGGTTATAAATTGAATTCTGAAGGTGGAGTTTTGAAAGTAAGCCCGGATGGTCTTCTACTGCAAAGTTCAACCCTTGCGGATTCGATTTCTTTCGAATTCTCTGATGGCATTACTACTTCCGTGCCCTGCTCGTACATCGAGTTTGCTGAGCGTTTAATTCTGCCTCAGTATAAACATCTTCCAGAAACAGAGGTGAAAGAGCACCACAGACGGGATGGATTTGAGGTTGGAAATGCTGATAAGATCTTTGAAAGTACATCCAAACAGCAGCAGACGGCACCGGCT GGGGCTCAATCATTTCTTAGGAATATTTTGGCGAGCATGGAGGCAGTTTATCTGAGCCGTAATCCCACAGCAAAAGCCATATTGGAGCTTGTTCCATCGGTCGATAATGATAAAATTTGCTACGATCATCTTGCATTTAGGACTTTTGGGGTGAATGGCCATGGAATTGATTCGTTAGCAGACTTTTTTCTGGACTTTGGATATACACGACAACAAGAATTGGCATTCCCAGCCAAAAAGCTAAAAGCATTTTGGTTTTCACCTCCAACCATTTCTCAGGCTCCTGATACTGATGATGGTAGTGGAATCAATGGGCCTCTGCCAAGAGTGTTCATATCAGAACTTCTTGTGGATCAGATGAGTCAACAAACTCAGGAAATAATAAGAAAATACACTGAAAGTTCTCACAATGGAAAGAAGCATGCTGCTCTTGCAAGTGCTCTAGGTTCCTTGACATGGGAAAAGCCTTCGCATTCTGAATTTTTGCAATTAGCGAGGGAGAGTGAATATGCTGCCTGGACTCTCGTGAATGGTTATGCGCTTAATCACGTGACTATTTCGACCCATCGTCTGAAATCTTATTTGAAAGATATCAAAAGCCTCAATCAGTTCATCGAGAGGAATGGTTATAAATTGAATTCTGAAGGTGGAGTTTTGAAAGTAAGCCCGGATGGTCTTCTACTGCAAAGTTCAACCCTTGCGGATTCGATTTCTTTCGAATTCTCTGATGGCATTACTACTTCCGTGCCCTGCTCGTACATCGAGTTTGCTGAGCGTTTAATTCTGCCTCAGTATAAACATCTTCCAGAAACAGAGGTGAAAGAGCACCACAGACGGGATGGATTTGAGGTTGGAAATGCTGATAAGATCTTTGAAAGTACATCCAAACAGCAGCAGACGGCACCGGCT GAQSFLRNILASMEAVYLSRNPTAKAILELVPSVDNDKICYDHLAFRTFGVNGHGIDSLADFFLDFGYTRQQELAFPAKKLKAFWFSPPTISQAPDTDDGSGINGPLPRVFISELLVDQMSQQTQEIIRKYTESSHNGKKHAALASALGSLTWEKPSHSEFLQLARESEYAAWTLVNGYALNHVTISTHRLKSYLKDIKSLNQFIERNGYKLNSEGGVLKVSPDGLLLQSSTLADSISFEFSDGITTSVPCSYIEFAERLILPQYKHLPETEVKEHHRRDGFEVGNADKIFESTSKQQQTAPA Homology
BLAST of MS023062 vs. NCBI nr
Match: XP_022158075.1 (uncharacterized protein LOC111024647 isoform X1 [Momordica charantia]) HSP 1 Score: 606.3 bits (1562), Expect = 1.5e-169 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
BLAST of MS023062 vs. NCBI nr
Match: XP_022158077.1 (uncharacterized protein LOC111024647 isoform X3 [Momordica charantia]) HSP 1 Score: 606.3 bits (1562), Expect = 1.5e-169 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
BLAST of MS023062 vs. NCBI nr
Match: XP_022158076.1 (uncharacterized protein LOC111024647 isoform X2 [Momordica charantia]) HSP 1 Score: 545.0 bits (1403), Expect = 4.0e-151 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0
BLAST of MS023062 vs. NCBI nr
Match: XP_038886795.1 (uncharacterized protein LOC120076905 [Benincasa hispida]) HSP 1 Score: 540.0 bits (1390), Expect = 1.3e-149 Identity = 267/301 (88.70%), Postives = 287/301 (95.35%), Query Frame = 0
BLAST of MS023062 vs. NCBI nr
Match: XP_023538588.1 (uncharacterized protein LOC111799309 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 532.7 bits (1371), Expect = 2.0e-147 Identity = 264/303 (87.13%), Postives = 286/303 (94.39%), Query Frame = 0
BLAST of MS023062 vs. ExPASy TrEMBL
Match: A0A6J1DUS2 (uncharacterized protein LOC111024647 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024647 PE=4 SV=1) HSP 1 Score: 606.3 bits (1562), Expect = 7.0e-170 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
BLAST of MS023062 vs. ExPASy TrEMBL
Match: A0A6J1DW85 (uncharacterized protein LOC111024647 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111024647 PE=4 SV=1) HSP 1 Score: 606.3 bits (1562), Expect = 7.0e-170 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
BLAST of MS023062 vs. ExPASy TrEMBL
Match: A0A6J1DZY9 (uncharacterized protein LOC111024647 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024647 PE=4 SV=1) HSP 1 Score: 545.0 bits (1403), Expect = 1.9e-151 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0
BLAST of MS023062 vs. ExPASy TrEMBL
Match: A0A6J1KIM8 (uncharacterized protein LOC111496091 OS=Cucurbita maxima OX=3661 GN=LOC111496091 PE=4 SV=1) HSP 1 Score: 530.4 bits (1365), Expect = 4.9e-147 Identity = 262/303 (86.47%), Postives = 285/303 (94.06%), Query Frame = 0
BLAST of MS023062 vs. ExPASy TrEMBL
Match: A0A6J1GHV7 (uncharacterized protein LOC111454305 OS=Cucurbita moschata OX=3662 GN=LOC111454305 PE=4 SV=1) HSP 1 Score: 525.4 bits (1352), Expect = 1.6e-145 Identity = 260/303 (85.81%), Postives = 283/303 (93.40%), Query Frame = 0
BLAST of MS023062 vs. TAIR 10
Match: AT1G07040.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27030.1); Has 540 Blast hits to 538 proteins in 187 species: Archae - 0; Bacteria - 333; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink). ) HSP 1 Score: 454.9 bits (1169), Expect = 5.0e-128 Identity = 220/297 (74.07%), Postives = 257/297 (86.53%), Query Frame = 0
BLAST of MS023062 vs. TAIR 10
Match: AT1G27020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27030.1); Has 514 Blast hits to 514 proteins in 175 species: Archae - 0; Bacteria - 311; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). ) HSP 1 Score: 323.6 bits (828), Expect = 1.7e-88 Identity = 161/294 (54.76%), Postives = 211/294 (71.77%), Query Frame = 0
BLAST of MS023062 vs. TAIR 10
Match: AT1G27030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27020.1); Has 504 Blast hits to 502 proteins in 169 species: Archae - 0; Bacteria - 299; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). ) HSP 1 Score: 314.7 bits (805), Expect = 8.1e-86 Identity = 151/293 (51.54%), Postives = 210/293 (71.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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