MS023033 (gene) Bitter gourd (TR) v1

Overview


Name	MS023033
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Zinc finger protein
Location	scaffold357: 779325 .. 781393 (+)
RNA-Seq Expression	MS023033
Synteny	MS023033

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGACCCCTCCACTAACTTCTTCTCAACTCTCTTCAAATTCACTCCTCCTCCTCCAAACCCTCCTCCCACCAATTTCTTCCACCTCCACGCGCCGCCGTCCTCCCCGCCGCTCCGGCAGGCCCTCCCCCTCCTCCGCCGCAGCCCCACCAGAGAAAACAACAACAACAACATGGACATAGACAAAGAGGCAAACGACGACGTTTCCAATAATTCTGTCACAGTTGCACTCCACATAGGGCTTCCCAGCCCCAGCGCCTCAGAAATGGCCTCCCTTTTGCTCTCTTCACAGCCCCACGAAGATCAAGAAGATGAAGATGAATTAGAAGATGAAGATGAAGATGAAGAATTAGAAGATCATCAGCAGCAACAGCAGCAGCAGCAGAATCAGCTATCTGGATTCTCCCTCAGTAGACTCAATAAAGGACAGTATTGGATCCCTACGCCCTCTCAAATCCTCATTGGCCCTACACAGTTCTCTTGTCCTGTTTGCTACAAGACCTTCAATAGATATAACAACATGCAGGTAAACAAAAAAACAAAAACAAAAACAAAAAACCCATCTTTTTAATTCATGGATTAGACCTAGATTTGTATTAAAAATTTGATCTTTTTGCATGGGTTGATTTAATTGTGGTGAGATCAGTGATTGAACAACACAGGCAATGTTCTTTGTGCCTCCCTTTGGTACTTTGAACTCTGTGCTATCTGATATCTGCTGCTGATCTCTTCTCCCACGTTTTGGGTTTTGAGGGTTTTTAATTATGAAAACTCTCTCTGTGATCTGTTTTGGCAGTTGCTTTTTGCTCAGAGTTTCTCTCAGGAAATTAATTATATTATCTGGGTTTCTTTTAGATTATCCAAAGACTGAATTTTTCTGTTGTTTTTCTTCTTTCTTGGGAAACAAACGCATTTTCTAATCCCTATTCAGTGTAGAAACTTGAAGGTGGATTCTTCTTTGATTGCAAAGTTTTGGTCTTTATGTTACAATGAGAGAGGAGAGCTAGAAAACCAACTTTGCAGGACTGTATTGATGAATATAACCACCCCCATTTTGCCTTGTTTTAATTTCTCTTGATGATAGTGGGAAAGTTTCTTCCTTTTTTTTCCCCTTGAAAAATGTGATCTGGGTTTGTGCAGAATTGATTGTTTTTCAATTTTCTTCACTTTTTTTTCTCAAATGGGTGTTGCAGAATTTGCTGTTTTTTTTTTAATTTGCTCCCCTTTCTCTCAAATGGGTGTTGCAAAAATTTGTTGTTTTTTTGCAATTTCTTCCCTTTTCTCTCAAATGAGTGCTGCAAAATTTTGTTATTTCCCAGTTTCCTCTCTAGTCTCTCAAATGGGTGTTCAAAATTTCTTATTTCTCAATTTCCTCTCACATGTAAGTTGCAAAAATTCCCATTTTCTCCATACAAAAAGCACAACTTTTCTCCATCTCCATCAATCTCGCCCCAAATTTCCCAAACTAAGAACCATTTCAAACATCCCTCAAGACCTAACCACGTAACTCAACCGTAAAGACATCGTTCGAATCTCCCCTTAACCAATCAACCCCACATCAATTTTTTATTCAAAAACAAGGGAGAAAAGAAAACTTTCTACCATCATCAAGAACACCCAAAAAAATAAAAAAGCTAGAAGAAAGCAAGTAAGAATTTGGGATGAGTACATATATGACTTATTTTCCTCTTCCTCCCTCAGATGCACATGTGGGGGCATGGCTCGCAATACAGGCGAGGCCCGGAGTCCCTCAGAGGCACACAGCCCACCGGGATGCTGCGGCTGCCGTGCTACTGCTGCTCCCCGGGCTGCCGCAACAACATCGACCACCCGCGCGCCAAGCCCCTCAAGGACTTCAGAACCCTTCAAACTCACTACAAACGCAAGCACGGCATCAAGCCCTTCATGTGCAGGAAATGTGGCAAGGCCTTCGCCGTGCGCGGCGATTGGCGAACGCACGAGAAGAACTGCGGTAAGCTCTGGTACTGCATTTGCGGGTCGGATTTTAAGCACAAGAGATCCCTCAAGGACCACATCAAGGCCTTTGGCCACGGCCATGCTGCCTAT

mRNA sequence

ATGGATGACCCCTCCACTAACTTCTTCTCAACTCTCTTCAAATTCACTCCTCCTCCTCCAAACCCTCCTCCCACCAATTTCTTCCACCTCCACGCGCCGCCGTCCTCCCCGCCGCTCCGGCAGGCCCTCCCCCTCCTCCGCCGCAGCCCCACCAGAGAAAACAACAACAACAACATGGACATAGACAAAGAGGCAAACGACGACGTTTCCAATAATTCTGTCACAGTTGCACTCCACATAGGGCTTCCCAGCCCCAGCGCCTCAGAAATGGCCTCCCTTTTGCTCTCTTCACAGCCCCACGAAGATCAAGAAGATGAAGATGAATTAGAAGATGAAGATGAAGATGAAGAATTAGAAGATCATCAGCAGCAACAGCAGCAGCAGCAGAATCAGCTATCTGGATTCTCCCTCAGTAGACTCAATAAAGGACAGTATTGGATCCCTACGCCCTCTCAAATCCTCATTGGCCCTACACAGTTCTCTTGTCCTGTTTGCTACAAGACCTTCAATAGATATAACAACATGCAGATGCACATGTGGGGGCATGGCTCGCAATACAGGCGAGGCCCGGAGTCCCTCAGAGGCACACAGCCCACCGGGATGCTGCGGCTGCCGTGCTACTGCTGCTCCCCGGGCTGCCGCAACAACATCGACCACCCGCGCGCCAAGCCCCTCAAGGACTTCAGAACCCTTCAAACTCACTACAAACGCAAGCACGGCATCAAGCCCTTCATGTGCAGGAAATGTGGCAAGGCCTTCGCCGTGCGCGGCGATTGGCGAACGCACGAGAAGAACTGCGGTAAGCTCTGGTACTGCATTTGCGGGTCGGATTTTAAGCACAAGAGATCCCTCAAGGACCACATCAAGGCCTTTGGCCACGGCCATGCTGCCTAT

Coding sequence (CDS)

ATGGATGACCCCTCCACTAACTTCTTCTCAACTCTCTTCAAATTCACTCCTCCTCCTCCAAACCCTCCTCCCACCAATTTCTTCCACCTCCACGCGCCGCCGTCCTCCCCGCCGCTCCGGCAGGCCCTCCCCCTCCTCCGCCGCAGCCCCACCAGAGAAAACAACAACAACAACATGGACATAGACAAAGAGGCAAACGACGACGTTTCCAATAATTCTGTCACAGTTGCACTCCACATAGGGCTTCCCAGCCCCAGCGCCTCAGAAATGGCCTCCCTTTTGCTCTCTTCACAGCCCCACGAAGATCAAGAAGATGAAGATGAATTAGAAGATGAAGATGAAGATGAAGAATTAGAAGATCATCAGCAGCAACAGCAGCAGCAGCAGAATCAGCTATCTGGATTCTCCCTCAGTAGACTCAATAAAGGACAGTATTGGATCCCTACGCCCTCTCAAATCCTCATTGGCCCTACACAGTTCTCTTGTCCTGTTTGCTACAAGACCTTCAATAGATATAACAACATGCAGATGCACATGTGGGGGCATGGCTCGCAATACAGGCGAGGCCCGGAGTCCCTCAGAGGCACACAGCCCACCGGGATGCTGCGGCTGCCGTGCTACTGCTGCTCCCCGGGCTGCCGCAACAACATCGACCACCCGCGCGCCAAGCCCCTCAAGGACTTCAGAACCCTTCAAACTCACTACAAACGCAAGCACGGCATCAAGCCCTTCATGTGCAGGAAATGTGGCAAGGCCTTCGCCGTGCGCGGCGATTGGCGAACGCACGAGAAGAACTGCGGTAAGCTCTGGTACTGCATTTGCGGGTCGGATTTTAAGCACAAGAGATCCCTCAAGGACCACATCAAGGCCTTTGGCCACGGCCATGCTGCCTAT

Protein sequence

MDDPSTNFFSTLFKFTPPPPNPPPTNFFHLHAPPSSPPLRQALPLLRRSPTRENNNNNMDIDKEANDDVSNNSVTVALHIGLPSPSASEMASLLLSSQPHEDQEDEDELEDEDEDEELEDHQQQQQQQQNQLSGFSLSRLNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGHGHAAY

Homology

[Close]

BLAST of MS023033 vs. NCBI nr
Match: XP_022154271.1 (zinc finger protein WIP2-like [Momordica charantia])

HSP 1 Score: 499.6 bits (1285), Expect = 1.9e-137
Identity = 239/240 (99.58%), Postives = 239/240 (99.58%), Query Frame = 0


Query: 59  MDIDKEANDDVSNNSVTVALHIGLPSPSASEMASLLLSSQPHEDQEDEDELEDEDEDEEL 118
           MDIDKEANDDVSNNSVTVALHIGLPSPSASEMASLLLSSQPH DQEDEDELEDEDEDEEL
Sbjct: 1   MDIDKEANDDVSNNSVTVALHIGLPSPSASEMASLLLSSQPHVDQEDEDELEDEDEDEEL 60

Query: 119 EDHQQQQQQQQNQLSGFSLSRLNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMH 178
           EDHQQQQQQQQNQLSGFSLSRLNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMH
Sbjct: 61  EDHQQQQQQQQNQLSGFSLSRLNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMH 120

Query: 179 MWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRK 238
           MWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRK
Sbjct: 121 MWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRK 180

Query: 239 HGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGHGHAAY 298
           HGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGHGHAAY
Sbjct: 181 HGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGHGHAAY 240

[Close]

BLAST of MS023033 vs. NCBI nr
Match: XP_023528242.1 (zinc finger protein WIP2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 485.3 bits (1248), Expect = 3.7e-133
Identity = 244/317 (76.97%), Postives = 270/317 (85.17%), Query Frame = 0


Query: 1   MDDPSTNFFSTLFKFT--------PPPPNPPPTNFF---HLHAPPSSPPLRQALPLLRRS 60
           MDDPSTNFF+ LFKF         PPPP PPP  +F   HLHAPPSSPPLRQALPLLR S
Sbjct: 1   MDDPSTNFFTNLFKFNPSPPNPHPPPPPPPPPPPYFLPTHLHAPPSSPPLRQALPLLRLS 60

Query: 61  PTRENNNNNMDIDKEANDDVS------NNSVTVALHIGLPSPSASEMASLLLSSQPHEDQ 120
           PTR + NNN   +  ++   S      N SVTVALHIGLPSPSASEMA+LLLSS  ++++
Sbjct: 61  PTRSSQNNNPPQNFSSSSSSSSAAAAANVSVTVALHIGLPSPSASEMATLLLSSNQNQEE 120

Query: 121 EDEDELEDEDEDEELEDHQQQQQQQQNQLSGFSL--SRLNKGQYWIPTPSQILIGPTQFS 180
           ED+DE ++E E+ ELE+ +++++++   +SG  L  SRLNKGQYWIPTPSQILIGPTQFS
Sbjct: 121 EDDDEDDEEHEEHELEEEEEEEEEEVAAISGLCLSNSRLNKGQYWIPTPSQILIGPTQFS 180

Query: 181 CPVCYKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPR 240
           CPVC+KTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPR
Sbjct: 181 CPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPR 240

Query: 241 AKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHK 299
           AKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHK
Sbjct: 241 AKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHK 300

[Close]

BLAST of MS023033 vs. NCBI nr
Match: KAG6580827.1 (Zinc finger protein WIP2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 482.6 bits (1241), Expect = 2.4e-132
Identity = 245/314 (78.03%), Postives = 269/314 (85.67%), Query Frame = 0


Query: 1   MDDPSTNFFSTLFKFTPPPPN-----PPPTNFF---HLHAPPSSPPLRQALPLLRRSPTR 60
           MDDPSTNFF+ LFKF P PPN     PPP  +F   HLHAPPSSPPLRQALPLLR SPTR
Sbjct: 1   MDDPSTNFFTNLFKFNPSPPNPHPPPPPPPPYFLPTHLHAPPSSPPLRQALPLLRLSPTR 60

Query: 61  ENNNNNMDIDKEANDDVS------NNSVTVALHIGLPSPSASEMASLLLSSQPHEDQEDE 120
            + NNN   +  ++   S      N SVTVALHIGLPSPSASEMA+LLLSS  ++++EDE
Sbjct: 61  SSQNNNPPQNFSSSSSSSSAAAAANVSVTVALHIGLPSPSASEMATLLLSSNQNQEEEDE 120

Query: 121 DELEDEDEDEELEDHQQQQQQQQNQLSGFSL--SRLNKGQYWIPTPSQILIGPTQFSCPV 180
           DE ++E E+ ELE  +++++++   +SG  L  SRLNKGQYWIPTPSQILIGPTQFSCPV
Sbjct: 121 DEDDEEHEEHELE--EEEEEEEVAAISGLCLSNSRLNKGQYWIPTPSQILIGPTQFSCPV 180

Query: 181 CYKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKP 240
           C+KTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKP
Sbjct: 181 CFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKP 240

Query: 241 LKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSL 299
           LKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSL
Sbjct: 241 LKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSL 300

[Close]

BLAST of MS023033 vs. NCBI nr
Match: XP_022983017.1 (zinc finger protein WIP2-like [Cucurbita maxima])

HSP 1 Score: 479.9 bits (1234), Expect = 1.5e-131
Identity = 245/313 (78.27%), Postives = 265/313 (84.66%), Query Frame = 0


Query: 1   MDDPSTNFFSTLFKFTPPPPN----PPPTNFF---HLHAPPSSPPLRQALPLLRRSPTRE 60
           MDDPSTNFF  LFKF P PPN    PPP  +F   HLHAPPSSPPLRQALPLLR SPTR 
Sbjct: 1   MDDPSTNFFKNLFKFNPSPPNPHPPPPPPPYFLPTHLHAPPSSPPLRQALPLLRLSPTRS 60

Query: 61  NNNNNMDIDKEANDDVS------NNSVTVALHIGLPSPSASEMASLLLSSQPHEDQEDED 120
           + NNN   +  ++   S      N SVTVALHIGLPSPSASEMA+LLLSS  ++++EDED
Sbjct: 61  SQNNNAPQNFSSSSSSSSAAAAANVSVTVALHIGLPSPSASEMATLLLSSNQNQEEEDED 120

Query: 121 ELEDEDEDEELEDHQQQQQQQQNQLSGFSL--SRLNKGQYWIPTPSQILIGPTQFSCPVC 180
           E +DE E EE     ++++++   +SG  L  SRLNKGQYWIPTPSQILIGPTQFSCPVC
Sbjct: 121 EDDDEHELEE-----EEEEEEVAAISGLCLSNSRLNKGQYWIPTPSQILIGPTQFSCPVC 180

Query: 181 YKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL 240
           +KTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL
Sbjct: 181 FKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL 240

Query: 241 KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK 299
           KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK
Sbjct: 241 KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK 300

[Close]

BLAST of MS023033 vs. NCBI nr
Match: XP_022934659.1 (zinc finger protein WIP2-like [Cucurbita moschata])

HSP 1 Score: 479.9 bits (1234), Expect = 1.5e-131
Identity = 244/314 (77.71%), Postives = 267/314 (85.03%), Query Frame = 0


Query: 1   MDDPSTNFFSTLFKFTPPPPN-----PPPTNFF---HLHAPPSSPPLRQALPLLRRSPTR 60
           MDDPSTNFF+ LFKF P PPN     PPP  +F   H HAPPSSPPLRQALPLLR SPTR
Sbjct: 1   MDDPSTNFFTNLFKFNPSPPNPHPPPPPPPPYFLPTHPHAPPSSPPLRQALPLLRLSPTR 60

Query: 61  ENNNNNMDIDKEANDDVS------NNSVTVALHIGLPSPSASEMASLLLSSQPHEDQEDE 120
            + NNN   +  ++   S      N SVTVALHIGLPSPSASEMA+LLLSS  ++++EDE
Sbjct: 61  SSQNNNPQQNFSSSSSSSSATAAANVSVTVALHIGLPSPSASEMATLLLSSNQNQEEEDE 120

Query: 121 DELEDEDEDEELEDHQQQQQQQQNQLSGFSL--SRLNKGQYWIPTPSQILIGPTQFSCPV 180
           DE ++E E+ ELE   ++++++   +SG  L  SRLNKGQYWIPTPSQILIGPTQFSCPV
Sbjct: 121 DEDDEEHEEHELE---EEEEEEVAAISGLCLSNSRLNKGQYWIPTPSQILIGPTQFSCPV 180

Query: 181 CYKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKP 240
           C+KTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKP
Sbjct: 181 CFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKP 240

Query: 241 LKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSL 299
           LKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSL
Sbjct: 241 LKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSL 300

[Close]

BLAST of MS023033 vs. ExPASy Swiss-Prot
Match: Q9SVY1 (Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 2.4e-111
Identity = 219/355 (61.69%), Postives = 244/355 (68.73%), Query Frame = 0


Query: 1   MDDPSTNFFSTLFKFTP----------PPPNP-----PPTNFFHL------------HAP 60
           M DP +NFF+  FK  P          P P+P     PP++FF                P
Sbjct: 1   MTDPYSNFFTDWFKSNPFHHYPNSSTNPSPHPLPPVTPPSSFFFFPQSGDLRRPPPPPTP 60

Query: 61  PSSPPLRQALPLLRRSPT--------------RENNNNNMDIDKE-------ANDDVSNN 120
           P SPPLR+ALPLL  SP               +E  + +MD+D +        N D  ++
Sbjct: 61  PPSPPLREALPLLSLSPANKQQDHHHNHDHLIQEPPSTSMDVDYDHHHQDDHHNLDDDDH 120

Query: 121 SVTVALHIGLPSPSASEMASLLLSSQP---------HEDQEDEDELEDEDEDEELEDHQQ 180
            VTVALHIGLPSPSA EMASLL+ S           HED   + +L+ E     +   + 
Sbjct: 121 DVTVALHIGLPSPSAQEMASLLMMSSSSSSSRTTHHHEDMNHKKDLDHEYSHGAVGGGED 180

Query: 181 QQQQQQNQLSGFSLSRLNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHG 240
             +       G  +SRLNKGQYWIPTPSQILIGPTQFSCPVC+KTFNRYNNMQMHMWGHG
Sbjct: 181 DDEDSVGGDGGCRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHG 240

Query: 241 SQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKP 299
           SQYR+GPESLRGTQPTGMLRLPCYCC+PGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKP
Sbjct: 241 SQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKP 300

[Close]

BLAST of MS023033 vs. ExPASy Swiss-Prot
Match: Q8W031 (Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 5.6e-92
Identity = 174/282 (61.70%), Postives = 201/282 (71.28%), Query Frame = 0


Query: 21  NPPPTNFFH-LHAPPSSPPLRQALPLLRRSPTRENNNNNMDIDKEANDDVSNN-----SV 80
           NP   N  H     P+SPPLR+ALPLL  SP R     +     + +   S+N      V
Sbjct: 42  NPNYINHTHTTSTSPNSPPLREALPLLSLSPIRHQEQQDQHYFMDTHQISSSNFLDDPLV 101

Query: 81  TVALHIGLPSPSASEMASLLLSSQPHEDQEDEDELEDEDEDEELEDHQQQQQQQQNQLSG 140
           TV LH+GLP+    E     ++     D++D+D   D   +  +E H             
Sbjct: 102 TVDLHLGLPNYGVGESIRSNIAPDATTDEQDQD--HDRGVEVTVESHLDDDDDHHGD--- 161

Query: 141 FSLSRLNKG-QYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRRGPESL 200
                L++G  YWIPTPSQILIGPTQF+CP+C+KTFNRYNNMQMHMWGHGSQYR+GPESL
Sbjct: 162 -----LHRGHHYWIPTPSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESL 221

Query: 201 RGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAF 260
           RGTQPTGMLRLPC+CC+PGC+NNIDHPRAKPLKDFRTLQTHYKRKHG KPF CR CGKAF
Sbjct: 222 RGTQPTGMLRLPCFCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAF 281

Query: 261 AVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGHGH 296
           AV+GDWRTHEKNCGKLWYC CGSDFKHKRSLKDH+KAFG+GH
Sbjct: 282 AVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGH 313

[Close]

BLAST of MS023033 vs. ExPASy Swiss-Prot
Match: Q8W030 (Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 8.9e-90
Identity = 170/284 (59.86%), Postives = 202/284 (71.13%), Query Frame = 0


Query: 34  PSSPPLRQALPLLRRSP------------------TRENNNNNMDIDKEANDDVSNNSVT 93
           P SPPLR+ALPLL  SP                  T E ++N+  +D+    D   + VT
Sbjct: 120 PDSPPLREALPLLSLSPIHKHQEPTANHHEYYFMETTETSSNSNFLDQ--CQDSYRHDVT 179

Query: 94  VALHIGLPS--PSASEMASLLLSSQPHEDQEDEDELEDEDEDEELEDHQQQQ--QQQQNQ 153
           V LH+GLP+     S  + ++L S  H++   +   +   E     DH  +    Q+ N 
Sbjct: 180 VDLHLGLPNLGDGGSSSSDVVLDSTDHQEGHHDHHQDQGLEVTMASDHDDEHGGLQRGNH 239

Query: 154 LSGFSLSRLNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRRGPE 213
           L  F          WIPTPSQIL+GPTQFSCP+C+KTFNRYNNMQMHMWGHGSQYR+GPE
Sbjct: 240 LHHF----------WIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPE 299

Query: 214 SLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGK 273
           SLRGTQPT ML+LPCYCC+PGC+NNIDHPRA+PLKDFRTLQTHYKRKHG++PF CR+CGK
Sbjct: 300 SLRGTQPTAMLKLPCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGK 359

Query: 274 AFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGHGH 296
           AFAV+GDWRTHEKNCGKLWYC CGSDFKHKRSLKDH+KAFG+GH
Sbjct: 360 AFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGH 391

[Close]

BLAST of MS023033 vs. ExPASy Swiss-Prot
Match: Q9FX68 (Zinc finger protein WIP6 OS=Arabidopsis thaliana OX=3702 GN=WIP6 PE=2 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 9.2e-79
Identity = 150/240 (62.50%), Postives = 170/240 (70.83%), Query Frame = 0


Query: 62  DKEANDDVSN-NSVTVALHIGLPSPSASEMASLLLSSQPHEDQEDEDELEDEDEDEELED 121
           D E N  ++N N VTVALHIG PS                    D++ L   +  E L  
Sbjct: 41  DHEFNHPLTNPNGVTVALHIGPPS-------------------SDKETLSGGNNQEGLTA 100

Query: 122 HQQQQQQQQNQLSGFSLSRLNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMW 181
            Q                    GQYWIP+ SQIL+GPTQFSC VC KTFNR+NNMQMHMW
Sbjct: 101 RQ--------------------GQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMW 160

Query: 182 GHGSQYRRGPESLRGTQ-PTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKH 241
           GHGSQYR+GPESLRGT+  + +LRLPCYCC+ GC+NNIDHPR+KPLKDFRTLQTHYKRKH
Sbjct: 161 GHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKH 220

Query: 242 GIKPFMCR-KCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGHGHAAY 299
           G KPF CR KC K FAVRGDWRTHEKNCGKLW+C+CGSDFKHKRSLKDH++AFG GHAA+
Sbjct: 221 GAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAAH 241

[Close]

BLAST of MS023033 vs. ExPASy Swiss-Prot
Match: Q8VWG3 (Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana OX=3702 GN=TT1 PE=1 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 4.3e-76
Identity = 136/220 (61.82%), Postives = 163/220 (74.09%), Query Frame = 0


Query: 95  LSSQPHEDQEDEDELEDEDEDEEL-----------EDHQQQQQQQQNQLSGFSLSR---- 154
           L ++  E +E+E+E ED + D +L            D +Q +++   +++ +   +    
Sbjct: 64  LYAEEGEQEEEEEEEEDREVDVDLHIGLPGFGKPSNDAKQLKKRNGKEIATYDAGKGIEN 123

Query: 155 -LNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQP 214
            L+   YWIP P QILIG T FSC VC+KTFNRYNN+QMHMWGHGSQYR+GPESL+GTQP
Sbjct: 124 ELSGKAYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQP 183

Query: 215 TGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGD 274
             ML +PCYCC  GCRN+IDHPR+KPLKDFRTLQTHYKRKHG KPF CR CGK  AV+GD
Sbjct: 184 RAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGD 243

Query: 275 WRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGHGHAAY 299
           WRTHEKNCGK W C+CGSDFKHKRSLKDH+KAFG GH  Y
Sbjct: 244 WRTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGSGHGPY 283

[Close]

BLAST of MS023033 vs. ExPASy TrEMBL
Match: A0A6J1DN86 (zinc finger protein WIP2-like OS=Momordica charantia OX=3673 GN=LOC111021562 PE=3 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 9.1e-138
Identity = 239/240 (99.58%), Postives = 239/240 (99.58%), Query Frame = 0


Query: 59  MDIDKEANDDVSNNSVTVALHIGLPSPSASEMASLLLSSQPHEDQEDEDELEDEDEDEEL 118
           MDIDKEANDDVSNNSVTVALHIGLPSPSASEMASLLLSSQPH DQEDEDELEDEDEDEEL
Sbjct: 1   MDIDKEANDDVSNNSVTVALHIGLPSPSASEMASLLLSSQPHVDQEDEDELEDEDEDEEL 60

Query: 119 EDHQQQQQQQQNQLSGFSLSRLNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMH 178
           EDHQQQQQQQQNQLSGFSLSRLNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMH
Sbjct: 61  EDHQQQQQQQQNQLSGFSLSRLNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMH 120

Query: 179 MWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRK 238
           MWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRK
Sbjct: 121 MWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRK 180

Query: 239 HGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGHGHAAY 298
           HGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGHGHAAY
Sbjct: 181 HGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGHGHAAY 240

[Close]

BLAST of MS023033 vs. ExPASy TrEMBL
Match: A0A6J1IY47 (zinc finger protein WIP2-like OS=Cucurbita maxima OX=3661 GN=LOC111481686 PE=3 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 7.5e-132
Identity = 245/313 (78.27%), Postives = 265/313 (84.66%), Query Frame = 0


Query: 1   MDDPSTNFFSTLFKFTPPPPN----PPPTNFF---HLHAPPSSPPLRQALPLLRRSPTRE 60
           MDDPSTNFF  LFKF P PPN    PPP  +F   HLHAPPSSPPLRQALPLLR SPTR 
Sbjct: 1   MDDPSTNFFKNLFKFNPSPPNPHPPPPPPPYFLPTHLHAPPSSPPLRQALPLLRLSPTRS 60

Query: 61  NNNNNMDIDKEANDDVS------NNSVTVALHIGLPSPSASEMASLLLSSQPHEDQEDED 120
           + NNN   +  ++   S      N SVTVALHIGLPSPSASEMA+LLLSS  ++++EDED
Sbjct: 61  SQNNNAPQNFSSSSSSSSAAAAANVSVTVALHIGLPSPSASEMATLLLSSNQNQEEEDED 120

Query: 121 ELEDEDEDEELEDHQQQQQQQQNQLSGFSL--SRLNKGQYWIPTPSQILIGPTQFSCPVC 180
           E +DE E EE     ++++++   +SG  L  SRLNKGQYWIPTPSQILIGPTQFSCPVC
Sbjct: 121 EDDDEHELEE-----EEEEEEVAAISGLCLSNSRLNKGQYWIPTPSQILIGPTQFSCPVC 180

Query: 181 YKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL 240
           +KTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL
Sbjct: 181 FKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPL 240

Query: 241 KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK 299
           KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK
Sbjct: 241 KDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLK 300

[Close]

BLAST of MS023033 vs. ExPASy TrEMBL
Match: A0A6J1F387 (zinc finger protein WIP2-like OS=Cucurbita moschata OX=3662 GN=LOC111441785 PE=3 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 7.5e-132
Identity = 244/314 (77.71%), Postives = 267/314 (85.03%), Query Frame = 0


Query: 1   MDDPSTNFFSTLFKFTPPPPN-----PPPTNFF---HLHAPPSSPPLRQALPLLRRSPTR 60
           MDDPSTNFF+ LFKF P PPN     PPP  +F   H HAPPSSPPLRQALPLLR SPTR
Sbjct: 1   MDDPSTNFFTNLFKFNPSPPNPHPPPPPPPPYFLPTHPHAPPSSPPLRQALPLLRLSPTR 60

Query: 61  ENNNNNMDIDKEANDDVS------NNSVTVALHIGLPSPSASEMASLLLSSQPHEDQEDE 120
            + NNN   +  ++   S      N SVTVALHIGLPSPSASEMA+LLLSS  ++++EDE
Sbjct: 61  SSQNNNPQQNFSSSSSSSSATAAANVSVTVALHIGLPSPSASEMATLLLSSNQNQEEEDE 120

Query: 121 DELEDEDEDEELEDHQQQQQQQQNQLSGFSL--SRLNKGQYWIPTPSQILIGPTQFSCPV 180
           DE ++E E+ ELE   ++++++   +SG  L  SRLNKGQYWIPTPSQILIGPTQFSCPV
Sbjct: 121 DEDDEEHEEHELE---EEEEEEVAAISGLCLSNSRLNKGQYWIPTPSQILIGPTQFSCPV 180

Query: 181 CYKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKP 240
           C+KTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKP
Sbjct: 181 CFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKP 240

Query: 241 LKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSL 299
           LKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSL
Sbjct: 241 LKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSL 300

[Close]

BLAST of MS023033 vs. ExPASy TrEMBL
Match: A0A6J1FXX4 (zinc finger protein WIP2-like OS=Cucurbita moschata OX=3662 GN=LOC111448785 PE=3 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 1.0e-128
Identity = 244/318 (76.73%), Postives = 268/318 (84.28%), Query Frame = 0


Query: 1   MDDPSTNFFSTLFKF----------TPPPPNPPPTNFFHLHAPPSSPPLRQALPLLRRSP 60
           MDDPSTNFF+ LFKF           PPP NPPP NFF  HAPPSSPPLRQALPLLR SP
Sbjct: 1   MDDPSTNFFTDLFKFNYPTNFHHHHNPPPSNPPP-NFF--HAPPSSPPLRQALPLLRLSP 60

Query: 61  TRENNNNNMDIDKEANDDVSNN---------SVTVALHIGLPSPSASEMASLLLSSQPHE 120
           TR + ++++     +  ++ NN         SVTVALHIGLPS +ASEMA+LL+S   ++
Sbjct: 61  TRSSQDHHLSFTSSSAMEIDNNNNNNDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQ 120

Query: 121 DQEDEDELEDEDEDEELEDHQQQQQQQQNQLSGFSL-SRLNKGQYWIPTPSQILIGPTQF 180
           + E+ED+LE+E E+EE ED  ++QQQ    +SGFSL SRLNKGQYWIPTPSQILIGPTQF
Sbjct: 121 N-EEEDQLEEELEEEEDED--EEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQF 180

Query: 181 SCPVCYKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHP 240
           SCPVC+KTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHP
Sbjct: 181 SCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHP 240

Query: 241 RAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKH 299
           RAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKH
Sbjct: 241 RAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKH 300

[Close]

BLAST of MS023033 vs. ExPASy TrEMBL
Match: A0A6J1I2Y3 (zinc finger protein WIP2-like OS=Cucurbita maxima OX=3661 GN=LOC111470055 PE=3 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 2.2e-128
Identity = 245/318 (77.04%), Postives = 268/318 (84.28%), Query Frame = 0


Query: 1   MDDPSTNFFSTLFKF-----------TPPPPNPPPTNFFHLHAPPSSPPLRQALPLLRRS 60
           MDDPSTNFF+ LFKF            PP  NPPP NFF  HAPPSSPPLRQALPLLR S
Sbjct: 1   MDDPSTNFFTDLFKFNYPTNFHHHHHNPPSSNPPP-NFF--HAPPSSPPLRQALPLLRLS 60

Query: 61  PTRENNNNN--------MDIDKEANDDVSNNSVTVALHIGLPSPSASEMASLLLSSQPHE 120
           PTR + +++        M+ID   N+D  + SVTVALHIGLPS +ASEMA+LL+S   ++
Sbjct: 61  PTRSSQDHHLSFTSSSAMEIDNNNNNDNEDVSVTVALHIGLPSSNASEMATLLVSDNNNQ 120

Query: 121 DQEDEDELEDEDEDEELEDHQQQQQQQQNQLSGFSL-SRLNKGQYWIPTPSQILIGPTQF 180
           + E+ED+LE+E E+EE ED  ++QQQ    +SGFSL SRLNKGQYWIPTPSQILIGPTQF
Sbjct: 121 N-EEEDQLEEELEEEEDED--EEQQQAGITISGFSLSSRLNKGQYWIPTPSQILIGPTQF 180

Query: 181 SCPVCYKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHP 240
           SCPVC+KTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHP
Sbjct: 181 SCPVCFKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHP 240

Query: 241 RAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKH 299
           RAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKH
Sbjct: 241 RAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKH 300

[Close]

BLAST of MS023033 vs. TAIR 10
Match: AT3G57670.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 403.3 bits (1035), Expect = 1.7e-112
Identity = 219/355 (61.69%), Postives = 244/355 (68.73%), Query Frame = 0


Query: 1   MDDPSTNFFSTLFKFTP----------PPPNP-----PPTNFFHL------------HAP 60
           M DP +NFF+  FK  P          P P+P     PP++FF                P
Sbjct: 1   MTDPYSNFFTDWFKSNPFHHYPNSSTNPSPHPLPPVTPPSSFFFFPQSGDLRRPPPPPTP 60

Query: 61  PSSPPLRQALPLLRRSPT--------------RENNNNNMDIDKE-------ANDDVSNN 120
           P SPPLR+ALPLL  SP               +E  + +MD+D +        N D  ++
Sbjct: 61  PPSPPLREALPLLSLSPANKQQDHHHNHDHLIQEPPSTSMDVDYDHHHQDDHHNLDDDDH 120

Query: 121 SVTVALHIGLPSPSASEMASLLLSSQP---------HEDQEDEDELEDEDEDEELEDHQQ 180
            VTVALHIGLPSPSA EMASLL+ S           HED   + +L+ E     +   + 
Sbjct: 121 DVTVALHIGLPSPSAQEMASLLMMSSSSSSSRTTHHHEDMNHKKDLDHEYSHGAVGGGED 180

Query: 181 QQQQQQNQLSGFSLSRLNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHG 240
             +       G  +SRLNKGQYWIPTPSQILIGPTQFSCPVC+KTFNRYNNMQMHMWGHG
Sbjct: 181 DDEDSVGGDGGCRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHG 240

Query: 241 SQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKP 299
           SQYR+GPESLRGTQPTGMLRLPCYCC+PGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKP
Sbjct: 241 SQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKP 300

[Close]

BLAST of MS023033 vs. TAIR 10
Match: AT1G51220.1 (WIP domain protein 5 )

HSP 1 Score: 339.0 bits (868), Expect = 4.0e-93
Identity = 174/282 (61.70%), Postives = 201/282 (71.28%), Query Frame = 0


Query: 21  NPPPTNFFH-LHAPPSSPPLRQALPLLRRSPTRENNNNNMDIDKEANDDVSNN-----SV 80
           NP   N  H     P+SPPLR+ALPLL  SP R     +     + +   S+N      V
Sbjct: 42  NPNYINHTHTTSTSPNSPPLREALPLLSLSPIRHQEQQDQHYFMDTHQISSSNFLDDPLV 101

Query: 81  TVALHIGLPSPSASEMASLLLSSQPHEDQEDEDELEDEDEDEELEDHQQQQQQQQNQLSG 140
           TV LH+GLP+    E     ++     D++D+D   D   +  +E H             
Sbjct: 102 TVDLHLGLPNYGVGESIRSNIAPDATTDEQDQD--HDRGVEVTVESHLDDDDDHHGD--- 161

Query: 141 FSLSRLNKG-QYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRRGPESL 200
                L++G  YWIPTPSQILIGPTQF+CP+C+KTFNRYNNMQMHMWGHGSQYR+GPESL
Sbjct: 162 -----LHRGHHYWIPTPSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESL 221

Query: 201 RGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAF 260
           RGTQPTGMLRLPC+CC+PGC+NNIDHPRAKPLKDFRTLQTHYKRKHG KPF CR CGKAF
Sbjct: 222 RGTQPTGMLRLPCFCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAF 281

Query: 261 AVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGHGH 296
           AV+GDWRTHEKNCGKLWYC CGSDFKHKRSLKDH+KAFG+GH
Sbjct: 282 AVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGH 313

[Close]

BLAST of MS023033 vs. TAIR 10
Match: AT3G20880.1 (WIP domain protein 4 )

HSP 1 Score: 331.6 bits (849), Expect = 6.3e-91
Identity = 170/284 (59.86%), Postives = 202/284 (71.13%), Query Frame = 0


Query: 34  PSSPPLRQALPLLRRSP------------------TRENNNNNMDIDKEANDDVSNNSVT 93
           P SPPLR+ALPLL  SP                  T E ++N+  +D+    D   + VT
Sbjct: 120 PDSPPLREALPLLSLSPIHKHQEPTANHHEYYFMETTETSSNSNFLDQ--CQDSYRHDVT 179

Query: 94  VALHIGLPS--PSASEMASLLLSSQPHEDQEDEDELEDEDEDEELEDHQQQQ--QQQQNQ 153
           V LH+GLP+     S  + ++L S  H++   +   +   E     DH  +    Q+ N 
Sbjct: 180 VDLHLGLPNLGDGGSSSSDVVLDSTDHQEGHHDHHQDQGLEVTMASDHDDEHGGLQRGNH 239

Query: 154 LSGFSLSRLNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRRGPE 213
           L  F          WIPTPSQIL+GPTQFSCP+C+KTFNRYNNMQMHMWGHGSQYR+GPE
Sbjct: 240 LHHF----------WIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPE 299

Query: 214 SLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGK 273
           SLRGTQPT ML+LPCYCC+PGC+NNIDHPRA+PLKDFRTLQTHYKRKHG++PF CR+CGK
Sbjct: 300 SLRGTQPTAMLKLPCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGK 359

Query: 274 AFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGHGH 296
           AFAV+GDWRTHEKNCGKLWYC CGSDFKHKRSLKDH+KAFG+GH
Sbjct: 360 AFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGH 391

[Close]

BLAST of MS023033 vs. TAIR 10
Match: AT1G13290.1 (C2H2-like zinc finger protein )

HSP 1 Score: 295.0 bits (754), Expect = 6.6e-80
Identity = 150/240 (62.50%), Postives = 170/240 (70.83%), Query Frame = 0


Query: 62  DKEANDDVSN-NSVTVALHIGLPSPSASEMASLLLSSQPHEDQEDEDELEDEDEDEELED 121
           D E N  ++N N VTVALHIG PS                    D++ L   +  E L  
Sbjct: 41  DHEFNHPLTNPNGVTVALHIGPPS-------------------SDKETLSGGNNQEGLTA 100

Query: 122 HQQQQQQQQNQLSGFSLSRLNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMW 181
            Q                    GQYWIP+ SQIL+GPTQFSC VC KTFNR+NNMQMHMW
Sbjct: 101 RQ--------------------GQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMW 160

Query: 182 GHGSQYRRGPESLRGTQ-PTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKH 241
           GHGSQYR+GPESLRGT+  + +LRLPCYCC+ GC+NNIDHPR+KPLKDFRTLQTHYKRKH
Sbjct: 161 GHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKH 220

Query: 242 GIKPFMCR-KCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGHGHAAY 299
           G KPF CR KC K FAVRGDWRTHEKNCGKLW+C+CGSDFKHKRSLKDH++AFG GHAA+
Sbjct: 221 GAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAAH 241

[Close]

BLAST of MS023033 vs. TAIR 10
Match: AT1G34790.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 286.2 bits (731), Expect = 3.0e-77
Identity = 136/220 (61.82%), Postives = 163/220 (74.09%), Query Frame = 0


Query: 95  LSSQPHEDQEDEDELEDEDEDEEL-----------EDHQQQQQQQQNQLSGFSLSR---- 154
           L ++  E +E+E+E ED + D +L            D +Q +++   +++ +   +    
Sbjct: 64  LYAEEGEQEEEEEEEEDREVDVDLHIGLPGFGKPSNDAKQLKKRNGKEIATYDAGKGIEN 123

Query: 155 -LNKGQYWIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRRGPESLRGTQP 214
            L+   YWIP P QILIG T FSC VC+KTFNRYNN+QMHMWGHGSQYR+GPESL+GTQP
Sbjct: 124 ELSGKAYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQP 183

Query: 215 TGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGD 274
             ML +PCYCC  GCRN+IDHPR+KPLKDFRTLQTHYKRKHG KPF CR CGK  AV+GD
Sbjct: 184 RAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGD 243

Query: 275 WRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGHGHAAY 299
           WRTHEKNCGK W C+CGSDFKHKRSLKDH+KAFG GH  Y
Sbjct: 244 WRTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGSGHGPY 283

The following BLAST results are available for this feature:

BLAST of MS023033 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154271.1	1.9e-137	99.58	zinc finger protein WIP2-like [Momordica charantia]	[more]
XP_023528242.1	3.7e-133	76.97	zinc finger protein WIP2-like [Cucurbita pepo subsp. pepo]	[more]
KAG6580827.1	2.4e-132	78.03	Zinc finger protein WIP2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022983017.1	1.5e-131	78.27	zinc finger protein WIP2-like [Cucurbita maxima]	[more]
XP_022934659.1	1.5e-131	77.71	zinc finger protein WIP2-like [Cucurbita moschata]	[more]

BLAST of MS023033 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVY1	2.4e-111	61.69	Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1	[more]
Q8W031	5.6e-92	61.70	Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1	[more]
Q8W030	8.9e-90	59.86	Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1	[more]
Q9FX68	9.2e-79	62.50	Zinc finger protein WIP6 OS=Arabidopsis thaliana OX=3702 GN=WIP6 PE=2 SV=1	[more]
Q8VWG3	4.3e-76	61.82	Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana OX=3702 GN=TT1 PE=1 SV=1	[more]

BLAST of MS023033 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DN86	9.1e-138	99.58	zinc finger protein WIP2-like OS=Momordica charantia OX=3673 GN=LOC111021562 PE=...	[more]
A0A6J1IY47	7.5e-132	78.27	zinc finger protein WIP2-like OS=Cucurbita maxima OX=3661 GN=LOC111481686 PE=3 S...	[more]
A0A6J1F387	7.5e-132	77.71	zinc finger protein WIP2-like OS=Cucurbita moschata OX=3662 GN=LOC111441785 PE=3...	[more]
A0A6J1FXX4	1.0e-128	76.73	zinc finger protein WIP2-like OS=Cucurbita moschata OX=3662 GN=LOC111448785 PE=3...	[more]
A0A6J1I2Y3	2.2e-128	77.04	zinc finger protein WIP2-like OS=Cucurbita maxima OX=3661 GN=LOC111470055 PE=3 S...	[more]

BLAST of MS023033 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57670.1	1.7e-112	61.69	C2H2-type zinc finger family protein	[more]
AT1G51220.1	4.0e-93	61.70	WIP domain protein 5	[more]
AT3G20880.1	6.3e-91	59.86	WIP domain protein 4	[more]
AT1G13290.1	6.6e-80	62.50	C2H2-like zinc finger protein	[more]
AT1G34790.1	3.0e-77	61.82	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 111..131
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 159..182 e-value: 1.3E-5 score: 26.9
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 222..296 e-value: 4.1E-7 score: 31.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..120
None	No IPR available	PANTHER	PTHR45878:SF29	ZINC FINGER PROTEIN WIP2	coord: 1..297
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 270..293 e-value: 150.0 score: 2.8 coord: 160..182 e-value: 0.45 score: 19.6 coord: 244..264 e-value: 49.0 score: 7.1
IPR013087	Zinc finger C2H2-type	PFAM	PF00096	zf-C2H2	coord: 160..179 e-value: 0.013 score: 15.9
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 162..182
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 160..187 score: 9.743433
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 244..264 score: 8.808193
IPR043584	Zinc finger protein WIP	PANTHER	PTHR45878	ZINC FINGER PROTEIN WIP2	coord: 1..297
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 226..264
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 156..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023033.1	MS023033.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
molecular_function	GO:0003700	DNA-binding transcription factor activity