MS022894 (gene) Bitter gourd (TR) v1

Overview
NameMS022894
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description(thale cress) hypothetical protein
Locationscaffold29: 345904 .. 345993 (+)
RNA-Seq ExpressionMS022894
SyntenyMS022894
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGACGGTGACGAAGGTAACCTACTTTCGGTGGACGCGGAGCCAACGAGTTCAGTCGAACAGCGTAACGAGTCTAAGGTTACAGANA

mRNA sequence

ATGCTGACGGTGACGAAGGTAACCTACTTTCGGTGGACGCGGAGCCAACGAGTTCAGTCGAACAGCGTAACGAGTCTAAGGTTACAGANA

Coding sequence (CDS)

ATGCTGACGGTGACGAAGGTAACCTACTTTCGGTGGACGCGGAGCCAACGAGTTCAGTCGAACAGCGTAACGAGTCTAAGGTTACAGANA

Protein sequence

MLTVTKVTYFRWTRSQRVQSNSVTSLRLQX
Homology
[Close]
BLAST of MS022894 vs. NCBI nr
Match: PHT81424.1 (hypothetical protein T459_14439 [Capsicum annuum] >PHT89489.1 hypothetical protein T459_04602 [Capsicum annuum])

HSP 1 Score: 52.4 bits (124), Expect = 8.0e-04
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 0 

Query: 1   MLTVTKVTYFRWTRSQRVQSNSVTSLRLQ 30
           MLTVTKVT FRWTRSQRV+SNSVTSLRLQ
Sbjct: 72  MLTVTKVTDFRWTRSQRVRSNSVTSLRLQ 100

[Close]
BLAST of MS022894 vs. ExPASy TrEMBL
Match: A0A2G2ZHK4 (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_04602 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.9e-04
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 0 

Query: 1   MLTVTKVTYFRWTRSQRVQSNSVTSLRLQ 30
           MLTVTKVT FRWTRSQRV+SNSVTSLRLQ
Sbjct: 72  MLTVTKVTDFRWTRSQRVRSNSVTSLRLQ 100

[Close]
BLAST of MS022894 vs. ExPASy TrEMBL
Match: A0A7G2FJM3 ((thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS23387 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 6.6e-04
Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 0 

Query: 1  MLTVTKVTYFRWTRSQRVQSNSVTSLRLQ 30
          MLTVTKVT FRWTRSQRVQS SVTSLRLQ
Sbjct: 1  MLTVTKVTDFRWTRSQRVQSKSVTSLRLQ 29

[Close]
BLAST of MS022894 vs. ExPASy TrEMBL
Match: A0A7G2FNI8 ((thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS23419 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 6.6e-04
Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 0 

Query: 1   MLTVTKVTYFRWTRSQRVQSNSVTSLRLQ 30
           MLTVTKVT FRWTRSQRVQS SVTSLRLQ
Sbjct: 72  MLTVTKVTDFRWTRSQRVQSKSVTSLRLQ 100

The following BLAST results are available for this feature:
BLAST of MS022894 vs. NCBI nr
Match NameE-valueIdentityDescription
PHT81424.18.0e-0493.10hypothetical protein T459_14439 [Capsicum annuum] >PHT89489.1 hypothetical prote... [more]
BLAST of MS022894 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS022894 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2G2ZHK43.9e-0493.10Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_04602 PE=4 SV=1[more]
A0A7G2FJM36.6e-0493.10(thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOC... [more]
A0A7G2FNI86.6e-0493.10(thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOC... [more]
BLAST of MS022894 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS022894.1MS022894.1mRNA