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MS022887 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGAATTTGCACCTATTTGTATCTATTTAGTGATCAGTCCGCTAGTTTCTTTGATCCCACTCGGTGTTCCTTTTCCATTTGCTTCCAATAGTTCAACCTATCCAGAAAAATTATCGGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGTCGTTTCGATATACGATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCCGGAAGTAACCTTTTCCTTTCCTTGGGCAGTACCTCTCAACAAGATTGATCTGTTTGGATCTTGGTCCATGATGGCCTTTTTATTGATTTTGACGATTGGATTTCTCTATGAATGGAAAAGGGGTGCTTCGGATCGGGAG ATGTCAGAATTTGCACCTATTTGTATCTATTTAGTGATCAGTCCGCTAGTTTCTTTGATCCCACTCGGTGTTCCTTTTCCATTTGCTTCCAATAGTTCAACCTATCCAGAAAAATTATCGGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGTCGTTTCGATATACGATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCCGGAAGTAACCTTTTCCTTTCCTTGGGCAGTACCTCTCAACAAGATTGATCTGTTTGGATCTTGGTCCATGATGGCCTTTTTATTGATTTTGACGATTGGATTTCTCTATGAATGGAAAAGGGGTGCTTCGGATCGGGAG ATGTCAGAATTTGCACCTATTTGTATCTATTTAGTGATCAGTCCGCTAGTTTCTTTGATCCCACTCGGTGTTCCTTTTCCATTTGCTTCCAATAGTTCAACCTATCCAGAAAAATTATCGGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGTCGTTTCGATATACGATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCCGGAAGTAACCTTTTCCTTTCCTTGGGCAGTACCTCTCAACAAGATTGATCTGTTTGGATCTTGGTCCATGATGGCCTTTTTATTGATTTTGACGATTGGATTTCTCTATGAATGGAAAAGGGGTGCTTCGGATCGGGAG MSEFAPICIYLVISPLVSLIPLGVPFPFASNSSTYPEKLSAYECGFDPSGDARSRFDIRFYLVSILFIILDPEVTFSFPWAVPLNKIDLFGSWSMMAFLLILTIGFLYEWKRGASDRE Homology
BLAST of MS022887 vs. NCBI nr
Match: YP_009913613.1 (NADH dehydrogenase subunit 3 [Luffa acutangula] >QLJ93013.1 NADH dehydrogenase subunit 3 [Luffa acutangula]) HSP 1 Score: 241.9 bits (616), Expect = 2.8e-60 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of MS022887 vs. NCBI nr
Match: AEN56123.1 (NADH dehydrogenase subunit 3 [Cucumis melo subsp. melo] >AZP40282.1 NADH dehydrogenase subunit 3 [Cucumis melo var. momordica]) HSP 1 Score: 239.6 bits (610), Expect = 1.4e-59 Identity = 116/118 (98.31%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of MS022887 vs. NCBI nr
Match: YP_004849330.1 (NADH dehydrogenase subunit 3 [Cucumis sativus] >ADZ10757.1 NADH dehydrogenase subunit 3 [Cucumis sativus]) HSP 1 Score: 239.6 bits (610), Expect = 1.4e-59 Identity = 116/118 (98.31%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of MS022887 vs. NCBI nr
Match: XP_038902187.1 (LOW QUALITY PROTEIN: NADH-ubiquinone oxidoreductase chain 3-like [Benincasa hispida]) HSP 1 Score: 235.7 bits (600), Expect = 2.0e-58 Identity = 115/118 (97.46%), Postives = 116/118 (98.31%), Query Frame = 0
BLAST of MS022887 vs. NCBI nr
Match: YP_009694647.1 (NADH dehydrogenase subunit 3 [Prunus avium] >AHF22675.1 NADH dehydrogenase subunit, partial [Fragaria iinumae] >AHF22677.1 NADH dehydrogenase subunit, partial [Fragaria vesca subsp. bracteata] >AHF22678.1 NADH dehydrogenase subunit, partial [Fragaria chiloensis] >AHF22679.1 NADH dehydrogenase subunit, partial [Fragaria virginiana] >AHF22680.1 NADH dehydrogenase subunit, partial [Fragaria vesca subsp. vesca] >PRQ15610.1 putative NADH:ubiquinone reductase (H(+)-translocating) [Rosa chinensis] >QNP08690.1 NADH dehydrogenase subunit 3 [Rosa sp. JP-2020] >QRV60035.1 NADH dehydrogenase subunit 3 [Fragaria orientalis]) HSP 1 Score: 233.8 bits (595), Expect = 7.6e-58 Identity = 115/118 (97.46%), Postives = 115/118 (97.46%), Query Frame = 0
BLAST of MS022887 vs. ExPASy Swiss-Prot
Match: P27062 (NADH-ubiquinone oxidoreductase chain 3 OS=Panax ginseng OX=4054 GN=ND3 PE=3 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 2.7e-58 Identity = 112/118 (94.92%), Postives = 113/118 (95.76%), Query Frame = 0
BLAST of MS022887 vs. ExPASy Swiss-Prot
Match: O99869 (NADH-ubiquinone oxidoreductase chain 3 OS=Solanum tuberosum OX=4113 GN=ND3 PE=3 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 9.7e-56 Identity = 108/118 (91.53%), Postives = 110/118 (93.22%), Query Frame = 0
BLAST of MS022887 vs. ExPASy Swiss-Prot
Match: P60159 (NADH-ubiquinone oxidoreductase chain 3 OS=Helianthus annuus OX=4232 GN=ND3 PE=2 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 1.0e-52 Identity = 106/118 (89.83%), Postives = 106/118 (89.83%), Query Frame = 0
BLAST of MS022887 vs. ExPASy Swiss-Prot
Match: Q36664 (NADH-ubiquinone oxidoreductase chain 3 OS=Pinus sylvestris OX=3349 GN=NAD3 PE=2 SV=2) HSP 1 Score: 207.2 bits (526), Expect = 1.0e-52 Identity = 104/118 (88.14%), Postives = 105/118 (88.98%), Query Frame = 0
BLAST of MS022887 vs. ExPASy Swiss-Prot
Match: P60160 (NADH-ubiquinone oxidoreductase chain 3 OS=Triticum aestivum OX=4565 GN=ND3 PE=2 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 1.0e-52 Identity = 106/118 (89.83%), Postives = 106/118 (89.83%), Query Frame = 0
BLAST of MS022887 vs. ExPASy TrEMBL
Match: A0A7D5XZ34 (NADH-ubiquinone oxidoreductase chain 3 OS=Luffa acutangula OX=56866 GN=nad3 PE=3 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.4e-60 Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of MS022887 vs. ExPASy TrEMBL
Match: G3EU38 (NADH-ubiquinone oxidoreductase chain 3 OS=Cucumis melo subsp. melo OX=412675 GN=nad3 PE=3 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 6.7e-60 Identity = 116/118 (98.31%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of MS022887 vs. ExPASy TrEMBL
Match: G3EIY2 (NADH-ubiquinone oxidoreductase chain 3 OS=Cucumis sativus OX=3659 GN=nad3 PE=3 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 6.7e-60 Identity = 116/118 (98.31%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of MS022887 vs. ExPASy TrEMBL
Match: A0A3Q9CSW0 (NADH-ubiquinone oxidoreductase chain 3 OS=Cucumis melo var. momordica OX=2034244 GN=nad3 PE=3 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 6.7e-60 Identity = 116/118 (98.31%), Postives = 118/118 (100.00%), Query Frame = 0
BLAST of MS022887 vs. ExPASy TrEMBL
Match: A0A0B4L2A3 (NADH-ubiquinone oxidoreductase chain 3 (Fragment) OS=Fragaria chiloensis OX=101007 GN=nad3 PE=3 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 3.7e-58 Identity = 115/118 (97.46%), Postives = 115/118 (97.46%), Query Frame = 0
BLAST of MS022887 vs. TAIR 10
Match: AT2G07751.1 (NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein ) HSP 1 Score: 214.2 bits (544), Expect = 5.8e-56 Identity = 108/118 (91.53%), Postives = 109/118 (92.37%), Query Frame = 0
BLAST of MS022887 vs. TAIR 10
Match: ATMG00990.1 (NADH dehydrogenase 3 ) HSP 1 Score: 214.2 bits (544), Expect = 5.8e-56 Identity = 108/118 (91.53%), Postives = 109/118 (92.37%), Query Frame = 0
BLAST of MS022887 vs. TAIR 10
Match: ATCG00440.1 (NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein ) HSP 1 Score: 77.8 bits (190), Expect = 6.5e-15 Identity = 39/108 (36.11%), Postives = 65/108 (60.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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