MS022854 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAGAAAGCGCTTACCGAGGAATAGAAAGGGAGGACAGGTTGGTTCGAGGGCCCGTTGGTCAAAGGAAAGGGGAGGTCCTGATGCCGGGACGGAGCCGTATGAGGCGAGAGTGTCACGTACGGTT ATGAAAAGAAAGCGCTTACCGAGGAATAGAAAGGGAGGACAGGTTGGTTCGAGGGCCCGTTGGTCAAAGGAAAGGGGAGGTCCTGATGCCGGGACGGAGCCGTATGAGGCGAGAGTGTCACGTACGGTT ATGAAAAGAAAGCGCTTACCGAGGAATAGAAAGGGAGGACAGGTTGGTTCGAGGGCCCGTTGGTCAAAGGAAAGGGGAGGTCCTGATGCCGGGACGGAGCCGTATGAGGCGAGAGTGTCACGTACGGTT MKRKRLPRNRKGGQVGSRARWSKERGGPDAGTEPYEARVSRTV Homology
BLAST of MS022854 vs. NCBI nr
Match: KAF4349940.1 (hypothetical protein G4B88_002362 [Cannabis sativa]) HSP 1 Score: 79.0 bits (193), Expect = 1.1e-11 Identity = 38/42 (90.48%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of MS022854 vs. NCBI nr
Match: KAA0047140.1 (hypothetical protein E6C27_scaffold49037G00040 [Cucumis melo var. makuwa] >TYJ98795.1 hypothetical protein E5676_scaffold78538G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 55.8 bits (133), Expect = 1.0e-04 Identity = 28/38 (73.68%), Postives = 30/38 (78.95%), Query Frame = 0
BLAST of MS022854 vs. NCBI nr
Match: XP_016901905.1 (PREDICTED: putative RNA-binding protein YlmH isoform X1 [Cucumis melo]) HSP 1 Score: 55.5 bits (132), Expect = 1.4e-04 Identity = 30/43 (69.77%), Postives = 32/43 (74.42%), Query Frame = 0
BLAST of MS022854 vs. NCBI nr
Match: KAA0058821.1 (putative RNA-binding protein YlmH isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 55.5 bits (132), Expect = 1.4e-04 Identity = 30/43 (69.77%), Postives = 32/43 (74.42%), Query Frame = 0
BLAST of MS022854 vs. NCBI nr
Match: XP_016901906.1 (PREDICTED: uncharacterized protein LOC103496076 isoform X3 [Cucumis melo]) HSP 1 Score: 55.5 bits (132), Expect = 1.4e-04 Identity = 30/43 (69.77%), Postives = 32/43 (74.42%), Query Frame = 0
BLAST of MS022854 vs. ExPASy TrEMBL
Match: A0A7J6DW83 (NADH-ubiquinone oxidoreductase chain 1 OS=Cannabis sativa OX=3483 GN=G4B88_002362 PE=3 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 5.5e-12 Identity = 38/42 (90.48%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of MS022854 vs. ExPASy TrEMBL
Match: A0A5A7TVE9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78538G00010 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 5.0e-05 Identity = 28/38 (73.68%), Postives = 30/38 (78.95%), Query Frame = 0
BLAST of MS022854 vs. ExPASy TrEMBL
Match: A0A5D3CIR0 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00930 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 6.6e-05 Identity = 30/43 (69.77%), Postives = 32/43 (74.42%), Query Frame = 0
BLAST of MS022854 vs. ExPASy TrEMBL
Match: A0A5A7UZA5 (Putative RNA-binding protein YlmH isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold803G00160 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 6.6e-05 Identity = 30/43 (69.77%), Postives = 32/43 (74.42%), Query Frame = 0
BLAST of MS022854 vs. ExPASy TrEMBL
Match: A0A1S4E1P4 (putative RNA-binding protein YlmH isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496076 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 6.6e-05 Identity = 30/43 (69.77%), Postives = 32/43 (74.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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