MS022762 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGAAGTGGTAGCTCGTCTCAAAGCGAGCCTGAAACCTCGGGTCGTTCAAAGCGGCATAAGAAGAATGATAGAACGAAGAAGGTTGATGTGTTTATATTTTGTCTTTTCCTTGCGTGTTTATATTGTAGTTTCACTGGTAGTTTTTCACCTTGTTATGTTACTCCATCTCTCTGCATTTTAGGACAAGGAGAGAGAGCGAAGTAAGAGTCATCACCATAAAAGGCGTAAACATAAAGCTAAAGAGGTAGACCACTTGCCTGTTTGGGTACTATTTTTCCTTTTTGATGAACTGAGAAACGTCATGAAAATCACCTCTTTGCATGTTTACCTGGATCTACATTCTTTTGGCATATTACTACAGAATGTATTGTGATTAAGTAGATGTTGCTTTTAACACATGTATTCAGTGTTTTGAAAGGCTAAAGGCAGTGTGGATGTTTTCCTTTTTTTCTTAATCCTTTCTAGGAGAGTTTAGACATAAGCTTTGAGGTGGTATGAGATGGAAACCTCAATTTAAATAAAAAGCTATTAATAAAATCATAAAAATTTGCTATCGAGTATTACCAAACATAATAAGTACAGAGCAAATCAAGTCTATATATTGTCACTTCCTTAAATAAAGATTTTAAGAAGTTATTTATGTTTTTATCTTTGATGTTTACTTTGTTCTTGGTGGTAAAAGTAGTACTGGGCTGAATTACCCCACCTTGTGGGTGTATTAGCATAGCATTAGATACATTAACTTTTTGTAAGAATAAGCATCAAAATAATATTTTTCTCCCAAATGAGACATAAAGACTCTAAGCCTCTTAATGCATTTTATGTAAGATGCATAAACCACCTATAATCTAAAGAAGGCATAAGTTCTGAGGCCAAAAAGTTGAGCCTCTCTTTAAGACAAGCCACGAAATCCTTCGACTAGAGCTTAAAGTAATGATCTATTTGTCAAATTATCTAATTGTTTCTAATCATGCAATCTTTAGACTACATCTATGACTGGTTTTGTTTTTGGAGTGGTTTTATAATTGGATATAAACTGAGATGCTTCCATATAATGTGAGATGCTTCTATTACTTTTTACTGATTGGTTCTTTGAAATTGGAGTTGGGGTCTGTGGCATGATGATCAATAATTGGTTTTGTTTTTGGAGTGGTTTCTGAATTGGATATAATGTGAGATGCTTCTATGACTATTTACTGATTGGTTCTTTGAAATTGGAGTTGGGGTCTGTGGCATGATGATCGGGCTGTTGATTTACTTGCCTGATGGTTTGTTGTGCGGATTTGTCCTGGCATTCGGAGTCGATGTATAGAAGCAGCCAGAAGAGAGAAGTAGCAGCCCTGTACAGCTTTCTAAGGTTCCCTTTCATAGCCCTGTTTACTTTCAGTTCTCTCTTTTTTTGGCATCTCGTATCTCAACTTTTCTGTTGCTCCACATATTTAACAGTTCCTAGCTCGTGAGAAGGATGATGGTGCCCGACGGAGTGCTGTCTCTGGCAAAAAGGTGAAAGAACCATCTCTAAACATTGAAAAAATTGTTGGAGTGCTTTTAACTGTTTCTAGCTAAAAGTACTTTTGCCATGACCAAACAGACTTCTCACTCAAACTCATCATGTTTGGGGGTGATTTATAAATGCTTTTAGAAAAAGTAAAAAACCCTTAAAAGTGTTGACGCATTTGGTAAGAAAACACTTTTTGGGTATTATTGGCCCAAGGGATTGTTGGGAAATACTTGAAAAAGCACTTTTAAGAGTATAAACTCAAACATAATAGTGACATTTTACTAGTAATCATATTACTTTTGCTAAAATCACTTATTTAGAAACAAACACAGTAATGGTGCTGCTATTGATAGTTAAGTTGACTTGTAATTACTTTGGTGCAGATTTTGTTGAAACTTGATAAATCAAAGGAAGACAAAGCTGAGGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGAT AGAAGTGGTAGCTCGTCTCAAAGCGAGCCTGAAACCTCGGGTCGTTCAAAGCGGCATAAGAAGAATGATAGAACGAAGAAGGACAAGGAGAGAGAGCGAAGTAAGAGTCATCACCATAAAAGGCGTAAACATAAAGCTAAAGAGAAGCAGCCAGAAGAGAGAAGTAGCAGCCCTGTACAGCTTTCTAAGTTCCTAGCTCGTGAGAAGGATGATGGTGCCCGACGGAGTGCTGTCTCTGGCAAAAAGATTTTGTTGAAACTTGATAAATCAAAGGAAGACAAAGCTGAGGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGAT AGAAGTGGTAGCTCGTCTCAAAGCGAGCCTGAAACCTCGGGTCGTTCAAAGCGGCATAAGAAGAATGATAGAACGAAGAAGGACAAGGAGAGAGAGCGAAGTAAGAGTCATCACCATAAAAGGCGTAAACATAAAGCTAAAGAGAAGCAGCCAGAAGAGAGAAGTAGCAGCCCTGTACAGCTTTCTAAGTTCCTAGCTCGTGAGAAGGATGATGGTGCCCGACGGAGTGCTGTCTCTGGCAAAAAGATTTTGTTGAAACTTGATAAATCAAAGGAAGACAAAGCTGAGGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGAT RSGSSSQSEPETSGRSKRHKKNDRTKKDKERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD Homology
BLAST of MS022762 vs. NCBI nr
Match: XP_022136184.1 (serine/arginine-rich splicing factor 11 [Momordica charantia]) HSP 1 Score: 190.7 bits (483), Expect = 7.0e-45 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of MS022762 vs. NCBI nr
Match: XP_008450603.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis melo]) HSP 1 Score: 176.4 bits (446), Expect = 1.4e-40 Identity = 106/112 (94.64%), Postives = 108/112 (96.43%), Query Frame = 0
BLAST of MS022762 vs. NCBI nr
Match: XP_038879353.1 (NKAP family protein [Benincasa hispida] >XP_038879354.1 NKAP family protein [Benincasa hispida] >XP_038879355.1 NKAP family protein [Benincasa hispida]) HSP 1 Score: 174.5 bits (441), Expect = 5.2e-40 Identity = 104/112 (92.86%), Postives = 108/112 (96.43%), Query Frame = 0
BLAST of MS022762 vs. NCBI nr
Match: XP_031738322.1 (NKAP family protein isoform X1 [Cucumis sativus] >KAE8653363.1 hypothetical protein Csa_007551 [Cucumis sativus]) HSP 1 Score: 171.8 bits (434), Expect = 3.4e-39 Identity = 103/109 (94.50%), Postives = 105/109 (96.33%), Query Frame = 0
BLAST of MS022762 vs. NCBI nr
Match: XP_011659818.1 (NKAP family protein isoform X2 [Cucumis sativus]) HSP 1 Score: 170.6 bits (431), Expect = 7.5e-39 Identity = 102/108 (94.44%), Postives = 104/108 (96.30%), Query Frame = 0
BLAST of MS022762 vs. ExPASy TrEMBL
Match: A0A6J1C3K8 (serine/arginine-rich splicing factor 11 OS=Momordica charantia OX=3673 GN=LOC111007940 PE=4 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 3.4e-45 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of MS022762 vs. ExPASy TrEMBL
Match: A0A1S3BQ85 (peptidyl-prolyl cis-trans isomerase G OS=Cucumis melo OX=3656 GN=LOC103492142 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 6.6e-41 Identity = 106/112 (94.64%), Postives = 108/112 (96.43%), Query Frame = 0
BLAST of MS022762 vs. ExPASy TrEMBL
Match: A0A0A0LVZ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569230 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 3.6e-39 Identity = 102/108 (94.44%), Postives = 104/108 (96.30%), Query Frame = 0
BLAST of MS022762 vs. ExPASy TrEMBL
Match: A0A6J1HZG5 (probable splicing factor, arginine/serine-rich 7 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469042 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 4.5e-37 Identity = 104/112 (92.86%), Postives = 104/112 (92.86%), Query Frame = 0
BLAST of MS022762 vs. ExPASy TrEMBL
Match: A0A6J1EV15 (serine/arginine-rich splicing factor 11 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437872 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 4.5e-37 Identity = 104/112 (92.86%), Postives = 104/112 (92.86%), Query Frame = 0
BLAST of MS022762 vs. TAIR 10
Match: AT5G27860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 117.1 bits (292), Expect = 9.2e-27 Identity = 74/111 (66.67%), Postives = 91/111 (81.98%), Query Frame = 0
BLAST of MS022762 vs. TAIR 10
Match: AT5G27860.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; Has 23049 Blast hits to 11981 proteins in 648 species: Archae - 2; Bacteria - 589; Metazoa - 13464; Fungi - 1977; Plants - 1635; Viruses - 89; Other Eukaryotes - 5293 (source: NCBI BLink). ) HSP 1 Score: 117.1 bits (292), Expect = 9.2e-27 Identity = 74/111 (66.67%), Postives = 91/111 (81.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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