MS022717 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTGAATATGGGATCAATGGTTGATGAAATGTGGATACCAATTACTTATGAGAAGCTACCAGACTTATGCTATAGTTGTGGAAAGGTATGGCATATTTTACAGGACTGTGAACGGTACTTGGAAGGTACAAAGAAGACCTACATATGGCAATTGTATGATAGAAAT CTGAATATGGGATCAATGGTTGATGAAATGTGGATACCAATTACTTATGAGAAGCTACCAGACTTATGCTATAGTTGTGGAAAGGTATGGCATATTTTACAGGACTGTGAACGGTACTTGGAAGGTACAAAGAAGACCTACATATGGCAATTGTATGATAGAAAT CTGAATATGGGATCAATGGTTGATGAAATGTGGATACCAATTACTTATGAGAAGCTACCAGACTTATGCTATAGTTGTGGAAAGGTATGGCATATTTTACAGGACTGTGAACGGTACTTGGAAGGTACAAAGAAGACCTACATATGGCAATTGTATGATAGAAAT LNMGSMVDEMWIPITYEKLPDLCYSCGKVWHILQDCERYLEGTKKTYIWQLYDRN Homology
BLAST of MS022717 vs. NCBI nr
Match: KAA0046998.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK04784.1 reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 59.3 bits (142), Expect = 1.2e-05 Identity = 20/35 (57.14%), Postives = 28/35 (80.00%), Query Frame = 0
BLAST of MS022717 vs. NCBI nr
Match: KAF4350434.1 (hypothetical protein F8388_005458 [Cannabis sativa] >KAF4377321.1 hypothetical protein G4B88_011156 [Cannabis sativa]) HSP 1 Score: 53.1 bits (126), Expect = 8.6e-04 Identity = 19/36 (52.78%), Postives = 24/36 (66.67%), Query Frame = 0
BLAST of MS022717 vs. NCBI nr
Match: KAF4373373.1 (hypothetical protein F8388_026204 [Cannabis sativa]) HSP 1 Score: 53.1 bits (126), Expect = 8.6e-04 Identity = 19/36 (52.78%), Postives = 24/36 (66.67%), Query Frame = 0
BLAST of MS022717 vs. ExPASy TrEMBL
Match: A0A0A0LNB5 (CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G427330 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.1e-07 Identity = 27/56 (48.21%), Postives = 38/56 (67.86%), Query Frame = 0
BLAST of MS022717 vs. ExPASy TrEMBL
Match: A0A5D3C0K2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G001040 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 5.8e-06 Identity = 20/35 (57.14%), Postives = 28/35 (80.00%), Query Frame = 0
BLAST of MS022717 vs. ExPASy TrEMBL
Match: A0A7J6DWD2 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_005458 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 4.2e-04 Identity = 19/36 (52.78%), Postives = 24/36 (66.67%), Query Frame = 0
BLAST of MS022717 vs. ExPASy TrEMBL
Match: A0A7J6FRL2 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_026204 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 4.2e-04 Identity = 19/36 (52.78%), Postives = 24/36 (66.67%), Query Frame = 0
BLAST of MS022717 vs. ExPASy TrEMBL
Match: A0A803P119 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 5.4e-04 Identity = 18/41 (43.90%), Postives = 28/41 (68.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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